https://launchpad.net/ubuntu/+source/cbflib/0.9.6+dfsg1-2build3/+build/20377363 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux lcy01-amd64-018 4.15.0-124-generic #127-Ubuntu SMP Fri Nov 6 10:54:43 UTC 2020 x86_64 Buildd toolchain package versions: launchpad-buildd_193~468~ubuntu18.04.1 python3-lpbuildd_193~468~ubuntu18.04.1 sbuild_0.75.0-1ubuntu1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu16.04.1 bzr_2.7.0+bzr6622-10 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu18.04.1 git_1:2.17.1-1ubuntu0.7 dpkg-dev_1.19.0.5ubuntu2.3 python-debian_0.1.32 python3-debian_0.1.32. Syncing the system clock with the buildd NTP service... 7 Dec 19:58:51 ntpdate[1723]: adjust time server 10.211.37.1 offset -0.001374 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=hirsute --arch=amd64 PACKAGEBUILD-20377363 --image-type chroot /home/buildd/filecache-default/720a8366e1260e086c1691fe6381a3f2b1c21d81 Creating target for build PACKAGEBUILD-20377363 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=hirsute --arch=amd64 PACKAGEBUILD-20377363 Starting target for build PACKAGEBUILD-20377363 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=hirsute --arch=amd64 PACKAGEBUILD-20377363 'deb http://ftpmaster.internal/ubuntu hirsute main universe' 'deb http://ftpmaster.internal/ubuntu hirsute-security main universe' 'deb http://ftpmaster.internal/ubuntu hirsute-updates main universe' 'deb http://ftpmaster.internal/ubuntu hirsute-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-20377363 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=hirsute --arch=amd64 PACKAGEBUILD-20377363 Updating target for build PACKAGEBUILD-20377363 Get:1 http://ftpmaster.internal/ubuntu hirsute InRelease [269 kB] Get:2 http://ftpmaster.internal/ubuntu hirsute-security InRelease [90.7 kB] Get:3 http://ftpmaster.internal/ubuntu hirsute-updates InRelease [90.7 kB] Get:4 http://ftpmaster.internal/ubuntu hirsute-proposed InRelease [121 kB] Get:5 http://ftpmaster.internal/ubuntu hirsute/main amd64 Packages [1392 kB] Get:6 http://ftpmaster.internal/ubuntu hirsute/main Translation-en [511 kB] Get:7 http://ftpmaster.internal/ubuntu hirsute/universe amd64 Packages [12.8 MB] Get:8 http://ftpmaster.internal/ubuntu hirsute/universe Translation-en [5363 kB] Get:9 http://ftpmaster.internal/ubuntu hirsute-proposed/main amd64 Packages [123 kB] Get:10 http://ftpmaster.internal/ubuntu hirsute-proposed/main Translation-en [48.7 kB] Get:11 http://ftpmaster.internal/ubuntu hirsute-proposed/universe amd64 Packages [683 kB] Get:12 http://ftpmaster.internal/ubuntu hirsute-proposed/universe Translation-en [340 kB] Fetched 21.9 MB in 8s (2822 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libisl22 libperl5.30 perl-modules-5.30 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: libisl23 libperl5.32 perl-modules-5.32 The following packages will be upgraded: adduser apt base-files base-passwd bash binutils binutils-common binutils-x86-64-linux-gnu bsdutils coreutils cpp-10 dash dpkg dpkg-dev fakeroot g++-10 gcc-10 gcc-10-base grep init init-system-helpers libapparmor1 libapt-pkg6.0 libasan6 libatomic1 libaudit-common libaudit1 libbinutils libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcrypt-dev libcrypt1 libcryptsetup12 libctf-nobfd0 libctf0 libdebconfclient0 libdevmapper1.02.1 libdpkg-perl libfakeroot libgcc-10-dev libgcc-s1 libgcrypt20 libgomp1 libgssapi-krb5-2 libidn2-0 libip4tc2 libitm1 libk5crypto3 libkrb5-3 libkrb5support0 liblsan0 liblz4-1 libmount1 libmpc3 libncurses6 libncursesw6 libnpth0 libquadmath0 libreadline8 libseccomp2 libselinux1 libsemanage-common libsemanage1 libsmartcols1 libsqlite3-0 libstdc++-10-dev libstdc++6 libsystemd0 libtinfo6 libtirpc-common libtirpc-dev libtirpc3 libtsan0 libubsan1 libudev1 libuuid1 linux-libc-dev login mount ncurses-base ncurses-bin passwd perl perl-base readline-common systemd systemd-sysv systemd-timesyncd sysvinit-utils tar tzdata util-linux 98 upgraded, 3 newly installed, 0 to remove and 0 not upgraded. Need to get 185 MB of archives. After this operation, 498 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu hirsute/main amd64 libcrypt-dev amd64 1:4.4.17-1ubuntu1 [105 kB] Get:2 http://ftpmaster.internal/ubuntu hirsute/main amd64 libc6-dev amd64 2.32-0ubuntu5 [2128 kB] Get:3 http://ftpmaster.internal/ubuntu hirsute/main amd64 libc-dev-bin amd64 2.32-0ubuntu5 [30.9 kB] Get:4 http://ftpmaster.internal/ubuntu hirsute/main amd64 libcrypt1 amd64 1:4.4.17-1ubuntu1 [78.8 kB] Get:5 http://ftpmaster.internal/ubuntu hirsute-proposed/main amd64 linux-libc-dev amd64 5.8.0-32.34+21.04.1 [1138 kB] Get:6 http://ftpmaster.internal/ubuntu hirsute/main amd64 libtirpc-common all 1.2.6-3 [7444 B] Get:7 http://ftpmaster.internal/ubuntu hirsute/main amd64 libk5crypto3 amd64 1.17-10ubuntu1 [79.2 kB] Get:8 http://ftpmaster.internal/ubuntu hirsute/main amd64 libgssapi-krb5-2 amd64 1.17-10ubuntu1 [121 kB] Get:9 http://ftpmaster.internal/ubuntu hirsute/main amd64 libkrb5-3 amd64 1.17-10ubuntu1 [332 kB] Get:10 http://ftpmaster.internal/ubuntu hirsute/main amd64 libkrb5support0 amd64 1.17-10ubuntu1 [30.7 kB] Get:11 http://ftpmaster.internal/ubuntu hirsute/main amd64 libtirpc-dev amd64 1.2.6-3 [184 kB] Get:12 http://ftpmaster.internal/ubuntu hirsute/main amd64 libtirpc3 amd64 1.2.6-3 [77.2 kB] Get:13 http://ftpmaster.internal/ubuntu hirsute/main amd64 libisl23 amd64 0.23-1 [652 kB] Get:14 http://ftpmaster.internal/ubuntu hirsute/main amd64 libcc1-0 amd64 10.2.0-20ubuntu1 [48.8 kB] Get:15 http://ftpmaster.internal/ubuntu hirsute/main amd64 gcc-10-base amd64 10.2.0-20ubuntu1 [19.6 kB] Get:16 http://ftpmaster.internal/ubuntu hirsute/main amd64 libgcc-s1 amd64 10.2.0-20ubuntu1 [41.7 kB] Get:17 http://ftpmaster.internal/ubuntu hirsute/main amd64 libgomp1 amd64 10.2.0-20ubuntu1 [102 kB] Get:18 http://ftpmaster.internal/ubuntu hirsute/main amd64 libitm1 amd64 10.2.0-20ubuntu1 [26.4 kB] Get:19 http://ftpmaster.internal/ubuntu hirsute/main amd64 libatomic1 amd64 10.2.0-20ubuntu1 [9276 B] Get:20 http://ftpmaster.internal/ubuntu hirsute/main amd64 libasan6 amd64 10.2.0-20ubuntu1 [2064 kB] Get:21 http://ftpmaster.internal/ubuntu hirsute/main amd64 liblsan0 amd64 10.2.0-20ubuntu1 [834 kB] Get:22 http://ftpmaster.internal/ubuntu hirsute/main amd64 libtsan0 amd64 10.2.0-20ubuntu1 [2008 kB] Get:23 http://ftpmaster.internal/ubuntu hirsute/main amd64 libubsan1 amd64 10.2.0-20ubuntu1 [784 kB] Get:24 http://ftpmaster.internal/ubuntu hirsute/main amd64 libquadmath0 amd64 10.2.0-20ubuntu1 [147 kB] Get:25 http://ftpmaster.internal/ubuntu hirsute/main amd64 g++-10 amd64 10.2.0-20ubuntu1 [45.6 MB] Get:26 http://ftpmaster.internal/ubuntu hirsute/main amd64 libstdc++-10-dev amd64 10.2.0-20ubuntu1 [1753 kB] Get:27 http://ftpmaster.internal/ubuntu hirsute/main amd64 libgcc-10-dev amd64 10.2.0-20ubuntu1 [2342 kB] Get:28 http://ftpmaster.internal/ubuntu hirsute/main amd64 gcc-10 amd64 10.2.0-20ubuntu1 [49.7 MB] Get:29 http://ftpmaster.internal/ubuntu hirsute/main amd64 cpp-10 amd64 10.2.0-20ubuntu1 [41.9 MB] Get:30 http://ftpmaster.internal/ubuntu hirsute/main amd64 libstdc++6 amd64 10.2.0-20ubuntu1 [501 kB] Get:31 http://ftpmaster.internal/ubuntu hirsute/main amd64 libmpc3 amd64 1.2.0-1 [44.3 kB] Get:32 http://ftpmaster.internal/ubuntu hirsute-proposed/main amd64 libctf0 amd64 2.35.50.20201207-0ubuntu1 [78.8 kB] Get:33 http://ftpmaster.internal/ubuntu hirsute-proposed/main amd64 libctf-nobfd0 amd64 2.35.50.20201207-0ubuntu1 [78.7 kB] Get:34 http://ftpmaster.internal/ubuntu hirsute-proposed/main amd64 libbinutils amd64 2.35.50.20201207-0ubuntu1 [482 kB] Get:35 http://ftpmaster.internal/ubuntu hirsute-proposed/main amd64 binutils-common amd64 2.35.50.20201207-0ubuntu1 [216 kB] Get:36 http://ftpmaster.internal/ubuntu hirsute-proposed/main amd64 binutils amd64 2.35.50.20201207-0ubuntu1 [3392 B] Get:37 http://ftpmaster.internal/ubuntu hirsute-proposed/main amd64 binutils-x86-64-linux-gnu amd64 2.35.50.20201207-0ubuntu1 [1670 kB] Get:38 http://ftpmaster.internal/ubuntu hirsute/main amd64 libc6 amd64 2.32-0ubuntu5 [2684 kB] Get:39 http://ftpmaster.internal/ubuntu hirsute/main amd64 base-files amd64 11ubuntu16 [60.5 kB] Get:40 http://ftpmaster.internal/ubuntu hirsute/main amd64 bash amd64 5.1~rc3-1ubuntu1 [680 kB] Get:41 http://ftpmaster.internal/ubuntu hirsute/main amd64 bsdutils amd64 1:2.36.1-1ubuntu2 [86.8 kB] Get:42 http://ftpmaster.internal/ubuntu hirsute-proposed/main amd64 coreutils amd64 8.32-4ubuntu2 [1353 kB] Get:43 http://ftpmaster.internal/ubuntu hirsute/main amd64 tar amd64 1.32+dfsg-1 [279 kB] Get:44 http://ftpmaster.internal/ubuntu hirsute/main amd64 dpkg amd64 1.20.5ubuntu3 [1172 kB] Get:45 http://ftpmaster.internal/ubuntu hirsute/main amd64 dash amd64 0.5.11+git20200708+dd9ef66+really0.5.10.2-0ubuntu1 [86.8 kB] Get:46 http://ftpmaster.internal/ubuntu hirsute/main amd64 grep amd64 3.6-1 [155 kB] Get:47 http://ftpmaster.internal/ubuntu hirsute/main amd64 login amd64 1:4.8.1-1ubuntu7 [220 kB] Get:48 http://ftpmaster.internal/ubuntu hirsute/main amd64 libncurses6 amd64 6.2+20201114-1 [102 kB] Get:49 http://ftpmaster.internal/ubuntu hirsute/main amd64 libncursesw6 amd64 6.2+20201114-1 [132 kB] Get:50 http://ftpmaster.internal/ubuntu hirsute/main amd64 libtinfo6 amd64 6.2+20201114-1 [87.5 kB] Get:51 http://ftpmaster.internal/ubuntu hirsute/main amd64 ncurses-bin amd64 6.2+20201114-1 [173 kB] Get:52 http://ftpmaster.internal/ubuntu hirsute/main amd64 perl-modules-5.32 all 5.32.0-5 [2754 kB] Get:53 http://ftpmaster.internal/ubuntu hirsute/main amd64 libperl5.32 amd64 5.32.0-5 [4044 kB] Get:54 http://ftpmaster.internal/ubuntu hirsute/main amd64 perl amd64 5.32.0-5 [225 kB] Get:55 http://ftpmaster.internal/ubuntu hirsute/main amd64 perl-base amd64 5.32.0-5 [1562 kB] Get:56 http://ftpmaster.internal/ubuntu hirsute/main amd64 util-linux amd64 2.36.1-1ubuntu2 [1073 kB] Get:57 http://ftpmaster.internal/ubuntu hirsute/main amd64 libdebconfclient0 amd64 0.255ubuntu1 [6184 B] Get:58 http://ftpmaster.internal/ubuntu hirsute/main amd64 base-passwd amd64 3.5.48 [47.5 kB] Get:59 http://ftpmaster.internal/ubuntu hirsute-proposed/main amd64 init-system-helpers all 1.59 [38.2 kB] Get:60 http://ftpmaster.internal/ubuntu hirsute/main amd64 libc-bin amd64 2.32-0ubuntu5 [622 kB] Get:61 http://ftpmaster.internal/ubuntu hirsute/main amd64 ncurses-base all 6.2+20201114-1 [18.5 kB] Get:62 http://ftpmaster.internal/ubuntu hirsute/main amd64 sysvinit-utils amd64 2.96-5ubuntu1 [20.8 kB] Get:63 http://ftpmaster.internal/ubuntu hirsute/main amd64 libgcrypt20 amd64 1.8.7-2ubuntu1 [424 kB] Get:64 http://ftpmaster.internal/ubuntu hirsute/main amd64 liblz4-1 amd64 1.9.3-0ubuntu1 [56.0 kB] Get:65 http://ftpmaster.internal/ubuntu hirsute/main amd64 systemd-sysv amd64 246.6-5ubuntu1 [10.3 kB] Get:66 http://ftpmaster.internal/ubuntu hirsute/main amd64 libaudit-common all 1:2.8.5-3ubuntu2 [4092 B] Get:67 http://ftpmaster.internal/ubuntu hirsute/main amd64 libcap-ng0 amd64 0.7.9-2.2build1 [11.0 kB] Get:68 http://ftpmaster.internal/ubuntu hirsute/main amd64 libaudit1 amd64 1:2.8.5-3ubuntu2 [39.5 kB] Get:69 http://ftpmaster.internal/ubuntu hirsute/main amd64 libselinux1 amd64 3.1-2build1 [69.4 kB] Get:70 http://ftpmaster.internal/ubuntu hirsute-proposed/main amd64 libsemanage-common all 3.1-1build2 [10.0 kB] Get:71 http://ftpmaster.internal/ubuntu hirsute-proposed/main amd64 libsemanage1 amd64 3.1-1build2 [86.9 kB] Get:72 http://ftpmaster.internal/ubuntu hirsute/main amd64 passwd amd64 1:4.8.1-1ubuntu7 [797 kB] Get:73 http://ftpmaster.internal/ubuntu hirsute-proposed/main amd64 adduser all 3.118ubuntu3 [163 kB] Get:74 http://ftpmaster.internal/ubuntu hirsute/main amd64 systemd-timesyncd amd64 246.6-5ubuntu1 [28.2 kB] Get:75 http://ftpmaster.internal/ubuntu hirsute/main amd64 libapparmor1 amd64 3.0.0-0ubuntu4 [35.9 kB] Get:76 http://ftpmaster.internal/ubuntu hirsute/main amd64 libcap2 amd64 1:2.44-1 [17.2 kB] Get:77 http://ftpmaster.internal/ubuntu hirsute/main amd64 libblkid1 amd64 2.36.1-1ubuntu2 [132 kB] Get:78 http://ftpmaster.internal/ubuntu hirsute/main amd64 libudev1 amd64 246.6-5ubuntu1 [68.0 kB] Get:79 http://ftpmaster.internal/ubuntu hirsute/main amd64 libdevmapper1.02.1 amd64 2:1.02.167-1ubuntu4 [128 kB] Get:80 http://ftpmaster.internal/ubuntu hirsute/main amd64 libuuid1 amd64 2.36.1-1ubuntu2 [21.6 kB] Get:81 http://ftpmaster.internal/ubuntu hirsute/main amd64 libcryptsetup12 amd64 2:2.3.4-1ubuntu1 [195 kB] Get:82 http://ftpmaster.internal/ubuntu hirsute/main amd64 libidn2-0 amd64 2.3.0-4 [52.4 kB] Get:83 http://ftpmaster.internal/ubuntu hirsute/main amd64 libip4tc2 amd64 1.8.5-3ubuntu4 [18.7 kB] Get:84 http://ftpmaster.internal/ubuntu hirsute/main amd64 libmount1 amd64 2.36.1-1ubuntu2 [147 kB] Get:85 http://ftpmaster.internal/ubuntu hirsute/main amd64 libseccomp2 amd64 2.4.3-1ubuntu5 [42.0 kB] Get:86 http://ftpmaster.internal/ubuntu hirsute/main amd64 mount amd64 2.36.1-1ubuntu2 [121 kB] Get:87 http://ftpmaster.internal/ubuntu hirsute/main amd64 systemd amd64 246.6-5ubuntu1 [4167 kB] Get:88 http://ftpmaster.internal/ubuntu hirsute/main amd64 libsystemd0 amd64 246.6-5ubuntu1 [273 kB] Get:89 http://ftpmaster.internal/ubuntu hirsute/main amd64 libapt-pkg6.0 amd64 2.1.12 [849 kB] Get:90 http://ftpmaster.internal/ubuntu hirsute/main amd64 apt amd64 2.1.12 [1314 kB] Get:91 http://ftpmaster.internal/ubuntu hirsute-proposed/main amd64 init amd64 1.59 [6164 B] Get:92 http://ftpmaster.internal/ubuntu hirsute/main amd64 libsmartcols1 amd64 2.36.1-1ubuntu2 [94.6 kB] Get:93 http://ftpmaster.internal/ubuntu hirsute-proposed/main amd64 readline-common all 8.1~rc3-1 [54.1 kB] Get:94 http://ftpmaster.internal/ubuntu hirsute-proposed/main amd64 libreadline8 amd64 8.1~rc3-1 [137 kB] Get:95 http://ftpmaster.internal/ubuntu hirsute-proposed/main amd64 libsqlite3-0 amd64 3.34.0-1 [589 kB] Get:96 http://ftpmaster.internal/ubuntu hirsute/main amd64 tzdata all 2020d-1ubuntu1 [293 kB] Get:97 http://ftpmaster.internal/ubuntu hirsute/main amd64 dpkg-dev all 1.20.5ubuntu3 [758 kB] Get:98 http://ftpmaster.internal/ubuntu hirsute/main amd64 libdpkg-perl all 1.20.5ubuntu3 [232 kB] Get:99 http://ftpmaster.internal/ubuntu hirsute-proposed/main amd64 libfakeroot amd64 1.25.3-1.1 [26.8 kB] Get:100 http://ftpmaster.internal/ubuntu hirsute-proposed/main amd64 fakeroot amd64 1.25.3-1.1 [62.9 kB] Get:101 http://ftpmaster.internal/ubuntu hirsute/main amd64 libnpth0 amd64 1.6-3 [8220 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 185 MB in 9s (20.5 MB/s) (Reading database ... 12980 files and directories currently installed.) Preparing to unpack .../libcrypt-dev_1%3a4.4.17-1ubuntu1_amd64.deb ... Unpacking libcrypt-dev:amd64 (1:4.4.17-1ubuntu1) over (1:4.4.16-1ubuntu1) ... Preparing to unpack .../libc6-dev_2.32-0ubuntu5_amd64.deb ... Unpacking libc6-dev:amd64 (2.32-0ubuntu5) over (2.32-0ubuntu3) ... Preparing to unpack .../libc-dev-bin_2.32-0ubuntu5_amd64.deb ... Unpacking libc-dev-bin (2.32-0ubuntu5) over (2.32-0ubuntu3) ... Preparing to unpack .../libcrypt1_1%3a4.4.17-1ubuntu1_amd64.deb ... Unpacking libcrypt1:amd64 (1:4.4.17-1ubuntu1) over (1:4.4.16-1ubuntu1) ... Setting up libcrypt1:amd64 (1:4.4.17-1ubuntu1) ... (Reading database ... 12979 files and directories currently installed.) Preparing to unpack .../00-linux-libc-dev_5.8.0-32.34+21.04.1_amd64.deb ... Unpacking linux-libc-dev:amd64 (5.8.0-32.34+21.04.1) over (5.8.0-25.26) ... Preparing to unpack .../01-libtirpc-common_1.2.6-3_all.deb ... Unpacking libtirpc-common (1.2.6-3) over (1.2.6-1build1) ... 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Setting up libstdc++-10-dev:amd64 (10.2.0-20ubuntu1) ... Setting up g++-10 (10.2.0-20ubuntu1) ... Processing triggers for libc-bin (2.32-0ubuntu5) ... RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-20377363 amd64 hirsute-proposed -c chroot:build-PACKAGEBUILD-20377363 --arch=amd64 --dist=hirsute-proposed --nolog -A cbflib_0.9.6+dfsg1-2build3.dsc Initiating build PACKAGEBUILD-20377363 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.15.0-124-generic #127-Ubuntu SMP Fri Nov 6 10:54:43 UTC 2020 x86_64 sbuild (Debian sbuild) 0.75.0 (21 Mar 2018) on lcy01-amd64-018.buildd +==============================================================================+ | cbflib 0.9.6+dfsg1-2build3 (amd64) Mon, 07 Dec 2020 20:00:30 +0000 | +==============================================================================+ Package: cbflib Version: 0.9.6+dfsg1-2build3 Source Version: 0.9.6+dfsg1-2build3 Distribution: hirsute-proposed Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: binary I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-20377363/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- cbflib_0.9.6+dfsg1-2build3.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/cbflib-klXZQZ/cbflib-0.9.6+dfsg1' with '<>' I: NOTICE: Log filtering will replace 'build/cbflib-klXZQZ' with '<>' +------------------------------------------------------------------------------+ | Install build-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-RCn7Ni/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-RCn7Ni/apt_archive ./ InRelease Get:2 copy:/<>/resolver-RCn7Ni/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-RCn7Ni/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-RCn7Ni/apt_archive ./ Sources [349 B] Get:5 copy:/<>/resolver-RCn7Ni/apt_archive ./ Packages [431 B] Fetched 1737 B in 0s (90.8 kB/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libisl22 libperl5.30 perl-modules-5.30 Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-RCn7Ni/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 14913 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any all) +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), dh-python, libhdf5-dev, pkg-config, python3-all-dbg, python3-all-dev Filtered Build-Depends: debhelper-compat (= 12), dh-python, libhdf5-dev, pkg-config, python3-all-dbg, python3-all-dev dpkg-deb: building package 'sbuild-build-depends-cbflib-dummy' in '/<>/resolver-RCn7Ni/apt_archive/sbuild-build-depends-cbflib-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-cbflib-dummy sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-RCn7Ni/apt_archive ./ InRelease Get:2 copy:/<>/resolver-RCn7Ni/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-RCn7Ni/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-RCn7Ni/apt_archive ./ Sources [527 B] Get:5 copy:/<>/resolver-RCn7Ni/apt_archive ./ Packages [606 B] Fetched 2096 B in 0s (78.3 kB/s) Reading package lists... Reading package lists... Install cbflib build dependencies (apt-based resolver) ------------------------------------------------------ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libisl22 libperl5.30 perl-modules-5.30 Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file gettext gettext-base groff-base hdf5-helpers intltool-debian libaec-dev libaec0 libarchive-zip-perl libcroco3 libdebhelper-perl libelf1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libgfortran5 libglib2.0-0 libhdf5-103-1 libhdf5-cpp-103-1 libhdf5-dev libhdf5-fortran-102 libhdf5-hl-100 libhdf5-hl-cpp-100 libhdf5-hl-fortran-100 libicu67 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libmagic-mgc libmagic1 libpipeline1 libpython3-all-dbg libpython3-all-dev libpython3-dbg libpython3-dev libpython3-stdlib libpython3.9 libpython3.9-dbg libpython3.9-dev libpython3.9-minimal libpython3.9-stdlib libsigsegv2 libsub-override-perl libsz2 libtool libuchardet0 libxml2 m4 mailcap man-db media-types mime-support pkg-config po-debconf python3 python3-all python3-all-dbg python3-all-dev python3-dbg python3-dev python3-distutils python3-lib2to3 python3-minimal python3.9 python3.9-dbg python3.9-dev python3.9-minimal zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc libasprintf-dev libgettextpo-dev groff libhdf5-doc libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl python3-doc python3-tk python3-venv python3.9-venv python3.9-doc python3-gdbm-dbg python3-tk-dbg binfmt-support Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev libmail-sendmail-perl gdb The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file gettext gettext-base groff-base hdf5-helpers intltool-debian libaec-dev libaec0 libarchive-zip-perl libcroco3 libdebhelper-perl libelf1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libgfortran5 libglib2.0-0 libhdf5-103-1 libhdf5-cpp-103-1 libhdf5-dev libhdf5-fortran-102 libhdf5-hl-100 libhdf5-hl-cpp-100 libhdf5-hl-fortran-100 libicu67 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libmagic-mgc libmagic1 libpipeline1 libpython3-all-dbg libpython3-all-dev libpython3-dbg libpython3-dev libpython3-stdlib libpython3.9 libpython3.9-dbg libpython3.9-dev libpython3.9-minimal libpython3.9-stdlib libsigsegv2 libsub-override-perl libsz2 libtool libuchardet0 libxml2 m4 mailcap man-db media-types mime-support pkg-config po-debconf python3 python3-all python3-all-dbg python3-all-dev python3-dbg python3-dev python3-distutils python3-lib2to3 python3-minimal python3.9 python3.9-dbg python3.9-dev python3.9-minimal sbuild-build-depends-cbflib-dummy zlib1g-dev 0 upgraded, 81 newly installed, 0 to remove and 0 not upgraded. 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http://ftpmaster.internal/ubuntu hirsute/main amd64 python3-dev amd64 3.9.0-3ubuntu1 [1212 B] Get:81 http://ftpmaster.internal/ubuntu hirsute/main amd64 python3-all-dev amd64 3.9.0-3ubuntu1 [1116 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 70.2 MB in 1s (58.0 MB/s) Selecting previously unselected package libpython3.9-minimal:amd64. (Reading database ... 14913 files and directories currently installed.) Preparing to unpack .../libpython3.9-minimal_3.9.1~rc1-2_amd64.deb ... Unpacking libpython3.9-minimal:amd64 (3.9.1~rc1-2) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.2.10-1_amd64.deb ... Unpacking libexpat1:amd64 (2.2.10-1) ... Selecting previously unselected package python3.9-minimal. Preparing to unpack .../python3.9-minimal_3.9.1~rc1-2_amd64.deb ... Unpacking python3.9-minimal (3.9.1~rc1-2) ... Setting up libpython3.9-minimal:amd64 (3.9.1~rc1-2) ... Setting up libexpat1:amd64 (2.2.10-1) ... Setting up python3.9-minimal (3.9.1~rc1-2) ... Selecting previously unselected package python3-minimal. (Reading database ... 15206 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.9.0-3ubuntu1_amd64.deb ... Unpacking python3-minimal (3.9.0-3ubuntu1) ... Selecting previously unselected package media-types. 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Setting up automake (1:1.16.3-1ubuntu1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.19.8.1-10build1) ... Setting up libjpeg-dev:amd64 (8c-2ubuntu8) ... Setting up libpython3.9-dev:amd64 (3.9.1~rc1-2) ... Setting up python3 (3.9.0-3ubuntu1) ... Setting up man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up python3.9-dbg (3.9.1~rc1-2) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libhdf5-hl-cpp-100:amd64 (1.10.6+repack-2) ... Setting up libhdf5-fortran-102:amd64 (1.10.6+repack-2) ... Setting up python3.9-dev (3.9.1~rc1-2) ... Setting up libhdf5-hl-fortran-100:amd64 (1.10.6+repack-2) ... Setting up python3-lib2to3 (3.9.0-1) ... Setting up python3-dbg (3.9.0-3ubuntu1) ... Setting up python3-distutils (3.9.0-1) ... Setting up dh-python (4.20201102ubuntu1) ... Setting up libpython3-dev:amd64 (3.9.0-3ubuntu1) ... Setting up po-debconf (1.0.21) ... Setting up python3-all (3.9.0-3ubuntu1) ... Setting up libpython3-all-dev:amd64 (3.9.0-3ubuntu1) ... Setting up python3-dev (3.9.0-3ubuntu1) ... Setting up libhdf5-dev (1.10.6+repack-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up python3-all-dbg (3.9.0-3ubuntu1) ... Setting up python3-all-dev (3.9.0-3ubuntu1) ... Setting up dh-autoreconf (19) ... Setting up debhelper (13.3ubuntu1) ... Setting up sbuild-build-depends-cbflib-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.32-0ubuntu5) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.15.0-124-generic amd64 (x86_64) Toolchain package versions: binutils_2.35.50.20201207-0ubuntu1 dpkg-dev_1.20.5ubuntu3 g++-10_10.2.0-20ubuntu1 gcc-10_10.2.0-20ubuntu1 libc6-dev_2.32-0ubuntu5 libstdc++-10-dev_10.2.0-20ubuntu1 libstdc++6_10.2.0-20ubuntu1 linux-libc-dev_5.8.0-32.34+21.04.1 Package versions: adduser_3.118ubuntu3 advancecomp_2.1-2.1build1 apt_2.1.12 autoconf_2.69-11.1 automake_1:1.16.3-1ubuntu1 autopoint_0.19.8.1-10build1 autotools-dev_20180224.1 base-files_11ubuntu16 base-passwd_3.5.48 bash_5.1~rc3-1ubuntu1 binutils_2.35.50.20201207-0ubuntu1 binutils-common_2.35.50.20201207-0ubuntu1 binutils-x86-64-linux-gnu_2.35.50.20201207-0ubuntu1 bsdextrautils_2.36.1-1ubuntu2 bsdutils_1:2.36.1-1ubuntu2 build-essential_12.8ubuntu3 bzip2_1.0.8-4ubuntu2 ca-certificates_20200601 coreutils_8.32-4ubuntu2 cpp_4:10.2.0-1ubuntu1 cpp-10_10.2.0-20ubuntu1 dash_0.5.11+git20200708+dd9ef66+really0.5.10.2-0ubuntu1 debconf_1.5.74 debhelper_13.3ubuntu1 debianutils_4.11.2 dh-autoreconf_19 dh-python_4.20201102ubuntu1 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3ubuntu1 dpkg_1.20.5ubuntu3 dpkg-dev_1.20.5ubuntu3 dwz_0.13+20201015-2 e2fsprogs_1.45.6-1ubuntu1 fakeroot_1.25.3-1.1 file_1:5.39-3 findutils_4.7.0-1ubuntu2 g++_4:10.2.0-1ubuntu1 g++-10_10.2.0-20ubuntu1 gcc_4:10.2.0-1ubuntu1 gcc-10_10.2.0-20ubuntu1 gcc-10-base_10.2.0-20ubuntu1 gettext_0.19.8.1-10build1 gettext-base_0.19.8.1-10build1 gpg_2.2.20-1ubuntu1 gpg-agent_2.2.20-1ubuntu1 gpgconf_2.2.20-1ubuntu1 gpgv_2.2.20-1ubuntu1 grep_3.6-1 groff-base_1.22.4-5 gzip_1.10-2ubuntu1 hdf5-helpers_1.10.6+repack-2 hostname_3.23 init_1.59 init-system-helpers_1.59 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libaec-dev_1.0.4-1 libaec0_1.0.4-1 libapparmor1_3.0.0-0ubuntu4 libapt-pkg6.0_2.1.12 libarchive-zip-perl_1.68-1 libargon2-1_0~20171227-0.2build20.10.0 libasan6_10.2.0-20ubuntu1 libassuan0_2.5.3-7.1 libatomic1_10.2.0-20ubuntu1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3ubuntu2 libaudit1_1:2.8.5-3ubuntu2 libbinutils_2.35.50.20201207-0ubuntu1 libblkid1_2.36.1-1ubuntu2 libbz2-1.0_1.0.8-4ubuntu2 libc-bin_2.32-0ubuntu5 libc-dev-bin_2.32-0ubuntu5 libc6_2.32-0ubuntu5 libc6-dev_2.32-0ubuntu5 libcap-ng0_0.7.9-2.2build1 libcap2_1:2.44-1 libcc1-0_10.2.0-20ubuntu1 libcom-err2_1.45.6-1ubuntu1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.17-1ubuntu1 libcrypt1_1:4.4.17-1ubuntu1 libcryptsetup12_2:2.3.4-1ubuntu1 libctf-nobfd0_2.35.50.20201207-0ubuntu1 libctf0_2.35.50.20201207-0ubuntu1 libdb5.3_5.3.28+dfsg1-0.6ubuntu3 libdebconfclient0_0.255ubuntu1 libdebhelper-perl_13.3ubuntu1 libdevmapper1.02.1_2:1.02.167-1ubuntu4 libdpkg-perl_1.20.5ubuntu3 libelf1_0.182-1 libexpat1_2.2.10-1 libexpat1-dev_2.2.10-1 libext2fs2_1.45.6-1ubuntu1 libfakeroot_1.25.3-1.1 libffi8ubuntu1_3.4~20200819gead65ca871-0ubuntu3 libfile-stripnondeterminism-perl_1.9.0-1 libgcc-10-dev_10.2.0-20ubuntu1 libgcc-s1_10.2.0-20ubuntu1 libgcrypt20_1.8.7-2ubuntu1 libgdbm-compat4_1.18.1-5.1 libgdbm6_1.18.1-5.1 libgfortran5_10.2.0-20ubuntu1 libglib2.0-0_2.66.3-2 libgmp10_2:6.2.0+dfsg-6ubuntu1 libgnutls30_3.6.15-4ubuntu2 libgomp1_10.2.0-20ubuntu1 libgpg-error0_1.38-2 libgssapi-krb5-2_1.17-10ubuntu1 libhdf5-103-1_1.10.6+repack-2 libhdf5-cpp-103-1_1.10.6+repack-2 libhdf5-dev_1.10.6+repack-2 libhdf5-fortran-102_1.10.6+repack-2 libhdf5-hl-100_1.10.6+repack-2 libhdf5-hl-cpp-100_1.10.6+repack-2 libhdf5-hl-fortran-100_1.10.6+repack-2 libhogweed6_3.6-2 libicu67_67.1-4 libidn2-0_2.3.0-4 libip4tc2_1.8.5-3ubuntu4 libisl22_0.22.1-1 libisl23_0.23-1 libitm1_10.2.0-20ubuntu1 libjpeg-dev_8c-2ubuntu8 libjpeg-turbo8_2.0.3-0ubuntu2 libjpeg-turbo8-dev_2.0.3-0ubuntu2 libjpeg8_8c-2ubuntu8 libjpeg8-dev_8c-2ubuntu8 libjson-c5_0.15-1 libk5crypto3_1.17-10ubuntu1 libkeyutils1_1.6.1-2ubuntu1 libkmod2_27+20200310-2ubuntu1 libkrb5-3_1.17-10ubuntu1 libkrb5support0_1.17-10ubuntu1 liblockfile-bin_1.16-1.1 liblockfile1_1.16-1.1 liblsan0_10.2.0-20ubuntu1 liblz4-1_1.9.3-0ubuntu1 liblzma5_5.2.4-1ubuntu1 libmagic-mgc_1:5.39-3 libmagic1_1:5.39-3 libmount1_2.36.1-1ubuntu2 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libncurses6_6.2+20201114-1 libncursesw6_6.2+20201114-1 libnettle8_3.6-2 libnpth0_1.6-3 libnsl-dev_1.3.0-0ubuntu3 libnsl2_1.3.0-0ubuntu3 libnss-nis_3.1-0ubuntu4 libnss-nisplus_1.3-0ubuntu4 libp11-kit0_0.23.21-2build1 libpam-modules_1.3.1-5ubuntu6 libpam-modules-bin_1.3.1-5ubuntu6 libpam-runtime_1.3.1-5ubuntu6 libpam0g_1.3.1-5ubuntu6 libpcre2-8-0_10.34-7 libpcre3_2:8.39-13 libperl5.30_5.30.3-4 libperl5.32_5.32.0-5 libpipeline1_1.5.3-1 libpng16-16_1.6.37-3 libprocps8_2:3.3.16-5ubuntu2 libpython3-all-dbg_3.9.0-3ubuntu1 libpython3-all-dev_3.9.0-3ubuntu1 libpython3-dbg_3.9.0-3ubuntu1 libpython3-dev_3.9.0-3ubuntu1 libpython3-stdlib_3.9.0-3ubuntu1 libpython3.9_3.9.1~rc1-2 libpython3.9-dbg_3.9.1~rc1-2 libpython3.9-dev_3.9.1~rc1-2 libpython3.9-minimal_3.9.1~rc1-2 libpython3.9-stdlib_3.9.1~rc1-2 libquadmath0_10.2.0-20ubuntu1 libreadline8_8.1~rc3-1 libseccomp2_2.4.3-1ubuntu5 libselinux1_3.1-2build1 libsemanage-common_3.1-1build2 libsemanage1_3.1-1build2 libsepol1_3.1-1 libsigsegv2_2.12-2build1 libsmartcols1_2.36.1-1ubuntu2 libsqlite3-0_3.34.0-1 libss2_1.45.6-1ubuntu1 libssl1.1_1.1.1f-1ubuntu4 libstdc++-10-dev_10.2.0-20ubuntu1 libstdc++6_10.2.0-20ubuntu1 libsub-override-perl_0.09-2 libsystemd0_246.6-5ubuntu1 libsz2_1.0.4-1 libtasn1-6_4.16.0-2 libtinfo6_6.2+20201114-1 libtirpc-common_1.2.6-3 libtirpc-dev_1.2.6-3 libtirpc3_1.2.6-3 libtool_2.4.6-14 libtsan0_10.2.0-20ubuntu1 libubsan1_10.2.0-20ubuntu1 libuchardet0_0.0.7-1 libudev1_246.6-5ubuntu1 libunistring2_0.9.10-4 libuuid1_2.36.1-1ubuntu2 libxml2_2.9.10+dfsg-6.3 libzstd1_1.4.5+dfsg-4 linux-libc-dev_5.8.0-32.34+21.04.1 lockfile-progs_0.1.18 login_1:4.8.1-1ubuntu7 logsave_1.45.6-1ubuntu1 lsb-base_11.1.0ubuntu2 m4_1.4.18-4 mailcap_3.67ubuntu1 make_4.3-4ubuntu1 man-db_2.9.3-2 mawk_1.3.4.20200120-2 media-types_1.0.1ubuntu1 mime-support_3.66 mount_2.36.1-1ubuntu2 ncurses-base_6.2+20201114-1 ncurses-bin_6.2+20201114-1 openssl_1.1.1f-1ubuntu4 optipng_0.7.7-1 passwd_1:4.8.1-1ubuntu7 patch_2.7.6-6 perl_5.32.0-5 perl-base_5.32.0-5 perl-modules-5.30_5.30.3-4 perl-modules-5.32_5.32.0-5 pinentry-curses_1.1.0-4build1 pkg-config_0.29.2-1ubuntu1 pkgbinarymangler_146 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.16-5ubuntu2 python3_3.9.0-3ubuntu1 python3-all_3.9.0-3ubuntu1 python3-all-dbg_3.9.0-3ubuntu1 python3-all-dev_3.9.0-3ubuntu1 python3-dbg_3.9.0-3ubuntu1 python3-dev_3.9.0-3ubuntu1 python3-distutils_3.9.0-1 python3-lib2to3_3.9.0-1 python3-minimal_3.9.0-3ubuntu1 python3.9_3.9.1~rc1-2 python3.9-dbg_3.9.1~rc1-2 python3.9-dev_3.9.1~rc1-2 python3.9-minimal_3.9.1~rc1-2 readline-common_8.1~rc3-1 rpcsvc-proto_1.4.2-0ubuntu4 sbuild-build-depends-cbflib-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.7-1ubuntu1 sensible-utils_0.0.13 systemd_246.6-5ubuntu1 systemd-sysv_246.6-5ubuntu1 systemd-timesyncd_246.6-5ubuntu1 sysvinit-utils_2.96-5ubuntu1 tar_1.32+dfsg-1 tzdata_2020d-1ubuntu1 ubuntu-keyring_2020.06.17.1 util-linux_2.36.1-1ubuntu2 xz-utils_5.2.4-1ubuntu1 zlib1g_1:1.2.11.dfsg-2ubuntu4 zlib1g-dev_1:1.2.11.dfsg-2ubuntu4 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Mon Dec 7 17:49:45 2020 UTC gpgv: using RSA key D56571B88A8BBAF140BF63D6BD7EAA60778FA6F5 gpgv: issuer "doko@ubuntu.com" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./cbflib_0.9.6+dfsg1-2build3.dsc dpkg-source: info: extracting cbflib in /<>/cbflib-0.9.6+dfsg1 dpkg-source: info: unpacking cbflib_0.9.6+dfsg1.orig.tar.xz dpkg-source: info: unpacking cbflib_0.9.6+dfsg1-2build3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 0001-makefile-fix-Get-system-HDF5-config-from-pkg-config.patch dpkg-source: info: applying 0002-makefile-fix-Fix-CBFLIB_DONT_USE_LOCAL_TIFF-config-v.patch dpkg-source: info: applying 0003-makefile-fix-Allow-disabling-PyCBF-from-env-with-NOP.patch dpkg-source: info: applying 0004-makefile-fix-Install-libs-to-CBF_PREFIX-INSTALL_LIB.patch dpkg-source: info: applying 0005-makefile-fix-Install-lib-to-SOVERSION-and-add-symlin.patch dpkg-source: info: applying 0006-makefile-fix-Allow-disabling-libimg-and-libfcb-build.patch dpkg-source: info: applying 0007-trailing-spaces.patch dpkg-source: info: applying 0007-makefile-fix-Do-not-link-example-progs-w.-libimg.patch dpkg-source: info: applying 0008-makefile-fix-Add-SONAME-to-linker-flags.patch dpkg-source: info: applying 0009-makefile-fix-Pick-up-CFLAGS-and-LDFLAGS-from-the-env.patch dpkg-source: info: applying 0010-makefile-fix-Prepend-CPPFLAGS-value-to-CFLAGS.patch dpkg-source: info: applying 0011-makefile-fix-Add-LDFLAGS-to-SOLDFLAGS-to-pick-up-har.patch dpkg-source: info: applying 0013-makefile-deb-Use-DESTDIR-usr-as-CBF_PREFIX.patch dpkg-source: info: applying 0014-makefile-deb-Do-not-build-tiff2cbf.patch dpkg-source: info: applying 0016-cross.patch dpkg-source: info: applying 0016-add-missing-LdFLAG-to-cbf_testxfelread.patch dpkg-source: info: applying 0017-Added-an-extra_compile_args-to-setup.py.patch dpkg-source: info: applying 0018-fix-the-FTBFS-with-missing-m4-Makefile.m4.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-20377363 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-20377363 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-20377363 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package cbflib dpkg-buildpackage: info: source version 0.9.6+dfsg1-2build3 dpkg-buildpackage: info: source distribution hirsute dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --with python3 --no-parallel debian/rules override_dh_auto_clean make[1]: Entering directory '/<>/cbflib-0.9.6+dfsg1' dh_auto_clean make -j1 distclean make[2]: Entering directory '/<>/cbflib-0.9.6+dfsg1' ./.undosymlinks make[2]: Leaving directory '/<>/cbflib-0.9.6+dfsg1' /usr/bin/make 'C++:=$(CXX)' /<>/cbflib-0.9.6+dfsg1/pycbf/setup.py make[2]: Entering directory '/<>/cbflib-0.9.6+dfsg1' (m4 -P -Dregexlib= -Dregexlib2= \ -Dregexlibdir=/lib -Dhdf5_prefix= -Dextra_compile_args=-I/usr/include/hdf5/serial \ /<>/cbflib-0.9.6+dfsg1/m4/setup_py.m4 > /<>/cbflib-0.9.6+dfsg1/pycbf/setup.py) make[2]: Leaving directory '/<>/cbflib-0.9.6+dfsg1' dh_auto_clean --buildsystem=pybuild --sourcedirectory=pycbf I: pybuild base:232: python3.9 setup.py clean running clean removing '/<>/cbflib-0.9.6+dfsg1/.pybuild/cpython3_3.9_pycbf/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.9' does not exist -- can't clean it I: pybuild base:232: python3.9-dbg setup.py clean running clean removing '/<>/cbflib-0.9.6+dfsg1/.pybuild/cpython3_3.9_dbg_pycbf/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.9' does not exist -- can't clean it rm -f pycbf/setup.py make[1]: Leaving directory '/<>/cbflib-0.9.6+dfsg1' dh_autoreconf_clean -O--no-parallel dh_clean -O--no-parallel debian/rules binary dh binary --with python3 --no-parallel dh_update_autotools_config -O--no-parallel dh_autoreconf -O--no-parallel debian/rules override_dh_auto_configure make[1]: Entering directory '/<>/cbflib-0.9.6+dfsg1' dh_auto_configure /usr/bin/make 'C++:=$(CXX)' /<>/cbflib-0.9.6+dfsg1/pycbf/setup.py make[2]: Entering directory '/<>/cbflib-0.9.6+dfsg1' (m4 -P -Dregexlib= -Dregexlib2= \ -Dregexlibdir=/lib -Dhdf5_prefix= -Dextra_compile_args=-I/usr/include/hdf5/serial \ /<>/cbflib-0.9.6+dfsg1/m4/setup_py.m4 > /<>/cbflib-0.9.6+dfsg1/pycbf/setup.py) make[2]: Leaving directory '/<>/cbflib-0.9.6+dfsg1' dh_auto_configure --buildsystem=pybuild --sourcedirectory=pycbf I: pybuild base:232: python3.9 setup.py config running config I: pybuild base:232: python3.9-dbg setup.py config running config make[1]: Leaving directory '/<>/cbflib-0.9.6+dfsg1' debian/rules override_dh_auto_build make[1]: Entering directory '/<>/cbflib-0.9.6+dfsg1' # build the C/C++ library dh_auto_build -- 'C++:=$(CXX)' all make -j1 "INSTALL=install --strip-program=true" C\+\+:=\$\(CXX\) all make[2]: Entering directory '/<>/cbflib-0.9.6+dfsg1' (cd /<>/cbflib-0.9.6+dfsg1/m4; m4 -P -Dfcb_bytes_in_rec=131072 fcb_exit_binary.m4) > /<>/cbflib-0.9.6+dfsg1/src/fcb_exit_binary.f90 (cd /<>/cbflib-0.9.6+dfsg1/m4; m4 -P -Dfcb_bytes_in_rec=131072 fcb_next_binary.m4) > /<>/cbflib-0.9.6+dfsg1/src/fcb_next_binary.f90 (cd /<>/cbflib-0.9.6+dfsg1/m4; m4 -P -Dfcb_bytes_in_rec=131072 fcb_open_cifin.m4) > /<>/cbflib-0.9.6+dfsg1/src/fcb_open_cifin.f90 (cd /<>/cbflib-0.9.6+dfsg1/m4; m4 -P -Dfcb_bytes_in_rec=131072 fcb_packed.m4) > /<>/cbflib-0.9.6+dfsg1/src/fcb_packed.f90 (cd /<>/cbflib-0.9.6+dfsg1/m4; m4 -P -Dfcb_bytes_in_rec=131072 fcb_read_bits.m4) > /<>/cbflib-0.9.6+dfsg1/src/fcb_read_bits.f90 (cd /<>/cbflib-0.9.6+dfsg1/m4; m4 -P -Dfcb_bytes_in_rec=131072 fcb_read_image.m4) > /<>/cbflib-0.9.6+dfsg1/src/fcb_read_image.f90 (cd /<>/cbflib-0.9.6+dfsg1/m4; m4 -P -Dfcb_bytes_in_rec=131072 fcb_read_xds_i2.m4) > /<>/cbflib-0.9.6+dfsg1/src/fcb_read_xds_i2.f90 chmod a+x .symlinks chmod a+x .undosymlinks chmod a+x doc/.symlinks chmod a+x doc/.undosymlinks ./.symlinks --use_ln touch symlinksdone rm -f /<>/cbflib-0.9.6+dfsg1/lib/libcbf.a rm -f *.o mkdir -p /<>/cbflib-0.9.6+dfsg1/lib gcc -g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -DCBF_REGEXLIB_REGEX \ -DCBF_FILTER_STATIC -I/<>/cbflib-0.9.6+dfsg1/include -I/<>/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial -c /<>/cbflib-0.9.6+dfsg1/src/cbf.c /<>/cbflib-0.9.6+dfsg1/src/cbf_airy_disk.c /<>/cbflib-0.9.6+dfsg1/src/cbf_alloc.c /<>/cbflib-0.9.6+dfsg1/src/cbf_ascii.c /<>/cbflib-0.9.6+dfsg1/src/cbf_binary.c /<>/cbflib-0.9.6+dfsg1/src/cbf_byte_offset.c /<>/cbflib-0.9.6+dfsg1/src/cbf_canonical.c /<>/cbflib-0.9.6+dfsg1/src/cbf_codes.c /<>/cbflib-0.9.6+dfsg1/src/cbf_compress.c /<>/cbflib-0.9.6+dfsg1/src/cbf_context.c /<>/cbflib-0.9.6+dfsg1/src/cbf_copy.c /<>/cbflib-0.9.6+dfsg1/src/cbf_file.c /<>/cbflib-0.9.6+dfsg1/src/cbf_getopt.c /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5_filter.c /<>/cbflib-0.9.6+dfsg1/src/cbf_lex.c /<>/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c /<>/cbflib-0.9.6+dfsg1/src/cbf_nibble_offset.c /<>/cbflib-0.9.6+dfsg1/src/cbf_packed.c /<>/cbflib-0.9.6+dfsg1/src/cbf_predictor.c /<>/cbflib-0.9.6+dfsg1/src/cbf_read_binary.c /<>/cbflib-0.9.6+dfsg1/src/cbf_read_mime.c /<>/cbflib-0.9.6+dfsg1/src/cbf_simple.c /<>/cbflib-0.9.6+dfsg1/src/cbf_string.c /<>/cbflib-0.9.6+dfsg1/src/cbf_stx.c /<>/cbflib-0.9.6+dfsg1/src/cbf_tree.c /<>/cbflib-0.9.6+dfsg1/src/cbf_uncompressed.c /<>/cbflib-0.9.6+dfsg1/src/cbf_write.c /<>/cbflib-0.9.6+dfsg1/src/cbf_write_binary.c /<>/cbflib-0.9.6+dfsg1/src/cbf_ws.c /<>/cbflib-0.9.6+dfsg1/src/cbff.c /<>/cbflib-0.9.6+dfsg1/src/md5c.c /<>/cbflib-0.9.6+dfsg1/src/img.c /<>/cbflib-0.9.6+dfsg1/src/fgetln.c /<>/cbflib-0.9.6+dfsg1/src/cbf.c: In function ‘cbf_convert_dictionary_definition’: /<>/cbflib-0.9.6+dfsg1/src/cbf.c:5474:22: warning: ‘itemname’ may be used uninitialized in this function [-Wmaybe-uninitialized] 5474 | cbf_failnez( cbf_set_hashedvalue (cbfdictionary, itemname, "name", -1)) | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:519, from /<>/cbflib-0.9.6+dfsg1/src/cbf.c:266: In function ‘strncpy’, inlined from ‘cbf_validate’ at /<>/cbflib-0.9.6+dfsg1/src/cbf.c:7605:6: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ output may be truncated copying 80 bytes from a string of length 81 [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘cbf_validate’ at /<>/cbflib-0.9.6+dfsg1/src/cbf.c:7686:25: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ output may be truncated copying 80 bytes from a string of length 81 [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:519, from /<>/cbflib-0.9.6+dfsg1/src/cbf_context.c:262: In function ‘strncpy’, inlined from ‘cbf_copy_string’ at /<>/cbflib-0.9.6+dfsg1/src/cbf_context.c:937:21: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_context.c: In function ‘cbf_copy_string’: /<>/cbflib-0.9.6+dfsg1/src/cbf_context.c:909:13: note: length computed here 909 | n = strlen(string); | ^~~~~~~~~~~~~~ In file included from /usr/include/string.h:519, from /<>/cbflib-0.9.6+dfsg1/src/cbf_context.c:262: In function ‘strncpy’, inlined from ‘cbf_copy_string’ at /<>/cbflib-0.9.6+dfsg1/src/cbf_context.c:922:21: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_context.c: In function ‘cbf_copy_string’: /<>/cbflib-0.9.6+dfsg1/src/cbf_context.c:909:13: note: length computed here 909 | n = strlen(string); | ^~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function ‘cbf_write_nx2cbf__cbfcat_op’: /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:20819:38: warning: implicit declaration of function ‘cbf_read_h5file_group’; did you mean ‘cbf_read_h5file’? [-Wimplicit-function-declaration] 20819 | error |= cbf_read_h5file_group(cbf,nx,nx->flags,(hid_t)object); | ^~~~~~~~~~~~~~~~~~~~~ | cbf_read_h5file /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:20811:48: warning: unused variable ‘indent’ [-Wunused-variable] 20811 | const unsigned int indent = table->indent; | ^~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:20784:31: warning: unused variable ‘nxpdb_found’ [-Wunused-variable] 20784 | const int nxpdb_found = _cbf_Attrval(object,"NXpdb_class", &NXpdb_class); | ^~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function ‘cbf_write_nx2cbf__cbfdb_op’: /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:20933:48: warning: unused variable ‘indent’ [-Wunused-variable] 20933 | const unsigned int indent = table->indent; | ^~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:20906:31: warning: unused variable ‘nxpdb_found’ [-Wunused-variable] 20906 | const int nxpdb_found = _cbf_Attrval(object,"NXpdb_class", &NXpdb_class); | ^~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function ‘cbf_write_nx2cbf__entry_op’: /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:21797:48: warning: unused variable ‘indent’ [-Wunused-variable] 21797 | const unsigned int indent = table->indent; | ^~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:21716:31: warning: unused variable ‘nxpdb_found’ [-Wunused-variable] 21716 | const int nxpdb_found = _cbf_Attrval(object,"NXpdb_class", &NXpdb_class); | ^~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function ‘cbf_write_nx2cbf’: /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22516:36: warning: variable ‘node’ set but not used [-Wunused-but-set-variable] 22516 | cbf_node * node = NULL; | ^~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22769:25: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 22769 | if (pixel_offset_name[i]) free((void*)pixel_offset_name[i]);pixel_offset_name[i]=NULL; | ^~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22769:85: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 22769 | if (pixel_offset_name[i]) free((void*)pixel_offset_name[i]);pixel_offset_name[i]=NULL; | ^~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22770:25: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 22770 | if (pixel_offset_long_name[i]) free((void*)pixel_offset_long_name[i]);pixel_offset_long_name[i]=NULL; | ^~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22770:95: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 22770 | if (pixel_offset_long_name[i]) free((void*)pixel_offset_long_name[i]);pixel_offset_long_name[i]=NULL; | ^~~~~~~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22771:25: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 22771 | if (pixel_size_name[i]) free((void*)pixel_size_name[i]);pixel_size_name[i]=NULL; | ^~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22771:81: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 22771 | if (pixel_size_name[i]) free((void*)pixel_size_name[i]);pixel_size_name[i]=NULL; | ^~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22110:30: warning: variable ‘data_row’ set but not used [-Wunused-but-set-variable] 22110 | unsigned int data_row = ~0x0; | ^~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22836:32: warning: variable ‘diffrn_scan_axis’ set but not used [-Wunused-but-set-variable] 22836 | cbf_node * diffrn_scan_axis = NULL; | ^~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function ‘cbf_write_cbf2nx__array_structure_list_axis’: /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:26493:50: warning: unused variable ‘rotation_axis_path’ [-Wunused-variable] 26493 | const char * rotation_axis_path = NULL; | ^~~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function ‘cbf_write_cbf2nx__cbf_general_axes’: /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:26704:26: warning: unused variable ‘equipment_component’ [-Wunused-variable] 26704 | const char * equipment_component = NULL; | ^~~~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function ‘cbf_write_cbf2nx__axis’: /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:27034:28: warning: variable ‘axis_rotation_axis’ set but not used [-Wunused-but-set-variable] 27034 | cbf_node * axis_rotation_axis = NULL; | ^~~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function ‘cbf_h5ds_store_as_column’: /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:29166:40: warning: unused variable ‘close’ [-Wunused-variable] 29166 | char open, close; | ^~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:29166:34: warning: unused variable ‘open’ [-Wunused-variable] 29166 | char open, close; | ^~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:28931:21: warning: variable ‘type_order’ set but not used [-Wunused-but-set-variable] 28931 | H5T_order_t type_order; | ^~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:28925:16: warning: unused variable ‘byte_order’ [-Wunused-variable] 28925 | char * byte_order; | ^~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:28903:14: warning: unused variable ‘buffer’ [-Wunused-variable] 28903 | char buffer[25]; | ^~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function ‘cbf_object_visit’: /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:30752:42: warning: variable ‘checked_digest’ set but not used [-Wunused-but-set-variable] 30752 | int binary_id, bits, sign, type, checked_digest, realarray = 0; | ^~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:30752:36: warning: variable ‘type’ set but not used [-Wunused-but-set-variable] 30752 | int binary_id, bits, sign, type, checked_digest, realarray = 0; | ^~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:30708:32: warning: variable ‘atcbf’ set but not used [-Wunused-but-set-variable] 30708 | int save_incbf, incbf, atcbf; /* within or at NXpdb or CBF_cif, etc. */ | ^~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:30707:36: warning: unused variable ‘atnexus’ [-Wunused-variable] 30707 | int save_innexus, innexus, atnexus; /* within or at NXentry */ | ^~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function ‘cbf_read_h5file_group’: /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:31937:13: warning: unused variable ‘errorcode’ [-Wunused-variable] 31937 | int errorcode = 0; | ^~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:31933:19: warning: unused variable ‘node’ [-Wunused-variable] 31933 | cbf_node *node; | ^~~~ At top level: /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:20853:16: warning: ‘cbf_write_nx2cbf__cbfdb_op’ defined but not used [-Wunused-function] 20853 | static int cbf_write_nx2cbf__cbfdb_op | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:20641:16: warning: ‘cbf_write_nx2cbf__cbfcat_op’ defined but not used [-Wunused-function] 20641 | static int cbf_write_nx2cbf__cbfcat_op | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:9133:16: warning: ‘cbf_require_nxdetectors’ defined but not used [-Wunused-function] 9133 | static int cbf_require_nxdetectors(const cbf_handle handle, | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function ‘cbf_get_nxdata_field_name2.isra’: /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:6345:37: warning: ‘%06d’ directive writing between 6 and 10 bytes into a region of size 7 [-Wformat-overflow=] 6345 | sprintf(buffer,"%06d",block); | ^~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:6345:36: note: directive argument in the range [1, 2147483647] 6345 | sprintf(buffer,"%06d",block); | ^~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/hdf5/serial/H5Epublic.h:20, from /usr/include/hdf5/serial/hdf5.h:26, from /<>/cbflib-0.9.6+dfsg1/include/cbf.h:253, from /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:258: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 7 and 11 bytes into a destination of size 7 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:519, from /<>/cbflib-0.9.6+dfsg1/include/cbf_hdf5.h:265, from /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:260: In function ‘strncat’, inlined from ‘cbf_create_h5handle2’ at /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:17932:9: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:122:10: warning: ‘__builtin___strncat_chk’ output may be truncated copying 10 bytes from a string of length 11 [-Wstringop-truncation] 122 | return __builtin___strncat_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncat’, inlined from ‘cbf_create_h5handle2’ at /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:17934:9: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:122:10: warning: ‘__builtin___strncat_chk’ output may be truncated copying 50 bytes from a string of length 53 [-Wstringop-truncation] 122 | return __builtin___strncat_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncat’, inlined from ‘cbf_create_h5handle2u’ at /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:18014:9: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:122:10: warning: ‘__builtin___strncat_chk’ output may be truncated copying 10 bytes from a string of length 11 [-Wstringop-truncation] 122 | return __builtin___strncat_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncat’, inlined from ‘cbf_create_h5handle2u’ at /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:18016:9: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:122:10: warning: ‘__builtin___strncat_chk’ output may be truncated copying 50 bytes from a string of length 53 [-Wstringop-truncation] 122 | return __builtin___strncat_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function ‘cbf_write_nx2cbf’: /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:23197:42: warning: ‘offset[2]’ may be used uninitialized in this function [-Wmaybe-uninitialized] 23197 | CBF_CALL(cbf_set_doublevalue(cbf,"%.15g",offset[2])); | ^~~~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:23195:42: warning: ‘offset[1]’ may be used uninitialized in this function [-Wmaybe-uninitialized] 23195 | CBF_CALL(cbf_set_doublevalue(cbf,"%.15g",offset[1])); | ^~~~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:23193:42: warning: ‘offset’ may be used uninitialized in this function [-Wmaybe-uninitialized] 23193 | CBF_CALL(cbf_set_doublevalue(cbf,"%.15g",offset[0])); | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:519, from /<>/cbflib-0.9.6+dfsg1/include/cbf_minicbf_header.h:264, from /<>/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c:259: In function ‘strncpy’, inlined from ‘cbf_append_string.part.0’ at /<>/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c:325:9: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c: In function ‘cbf_append_string.part.0’: /<>/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c:302:18: note: length computed here 302 | srclen = strlen(src); | ^~~~~~~~~~~ In file included from /usr/include/string.h:519, from /<>/cbflib-0.9.6+dfsg1/include/cbf_minicbf_header.h:264, from /<>/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c:259: In function ‘strncpy’, inlined from ‘cbf_append_string’ at /<>/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c:325:9, inlined from ‘cbf_append_string’ at /<>/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c:293:16, inlined from ‘cbf_set_minicbf_header’ at /<>/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c:429:13: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ output truncated before terminating nul copying 1 byte from a string of the same length [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_nibble_offset.c: In function ‘cbf_compress_nibble_offset’: /<>/cbflib-0.9.6+dfsg1/src/cbf_nibble_offset.c:936:21: warning: ‘dmode[0]’ may be used uninitialized in this function [-Wmaybe-uninitialized] 936 | curmode = dmode[inrun]; | ~~~~~~~~^~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_simple.c: In function ‘cbf_set_reference_beam_center’: /<>/cbflib-0.9.6+dfsg1/src/cbf_simple.c:8587:44: warning: variable ‘ncenter2’ set but not used [-Wunused-but-set-variable] 8587 | double nindex1, nindex2, ncenter1, ncenter2; | ^~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_simple.c:8587:34: warning: variable ‘ncenter1’ set but not used [-Wunused-but-set-variable] 8587 | double nindex1, nindex2, ncenter1, ncenter2; | ^~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_stx.c: In function ‘cbf_lex_wrapper’: /<>/cbflib-0.9.6+dfsg1/src/cbf_stx.c:370:13: warning: variable ‘cbffile’ set but not used [-Wunused-but-set-variable] 370 | cbf_file *cbffile; | ^~~~~~~ At top level: /<>/cbflib-0.9.6+dfsg1/src/cbf_stx.c:827:26: warning: ‘yytname’ defined but not used [-Wunused-const-variable=] 827 | static const char *const yytname[] = | ^~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/img.c: In function ‘img_read_mar345header’: /<>/cbflib-0.9.6+dfsg1/src/img.c:1334:44: warning: array subscript -1 is outside array bounds of ‘char[65]’ [-Warray-bounds] 1334 | for (C = C64+strlen(C64)-1; (C != C64-1 && *C == ' '); C-- ) *C = '\0'; | ~~~^~ /<>/cbflib-0.9.6+dfsg1/src/img.c:1230:8: note: while referencing ‘C64’ 1230 | char C64[65], D64[65], *C, *D, *E; | ^~~ In file included from /usr/include/string.h:519, from /<>/cbflib-0.9.6+dfsg1/src/img.c:12: In function ‘memcpy’, inlined from ‘img_set_tags’ at /<>/cbflib-0.9.6+dfsg1/src/img.c:1784:7, inlined from ‘img_set_tags’ at /<>/cbflib-0.9.6+dfsg1/src/img.c:1761:5, inlined from ‘img_free_handle’ at /<>/cbflib-0.9.6+dfsg1/src/img.c:1844:3: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:29:10: warning: ‘__builtin___memcpy_chk’ writing between 18446744039349813248 and 18446744073709551600 bytes into a region of size 0 [-Wstringop-overflow=] 29 | return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/img.c: In function ‘img_free_handle’: /<>/cbflib-0.9.6+dfsg1/src/img.c:1773:28: note: at offset 0 to an object with size 0 allocated by ‘malloc’ here 1773 | img->tag = (img_tag *) malloc (tags * sizeof (img_tag)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/bin/ar cr /<>/cbflib-0.9.6+dfsg1/lib/libcbf.a *.o /usr/bin/ranlib /<>/cbflib-0.9.6+dfsg1/lib/libcbf.a rm -f *.o mkdir -p /<>/cbflib-0.9.6+dfsg1/bin gcc -g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -D_SVID_SOURCE -I/<>/cbflib-0.9.6+dfsg1/include -I/<>/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \ /<>/cbflib-0.9.6+dfsg1/examples/adscimg2cbf.c /<>/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c -L/<>/cbflib-0.9.6+dfsg1/lib \ -lcbf -lm -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -o /<>/cbflib-0.9.6+dfsg1/bin/adscimg2cbf In file included from /usr/include/x86_64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /<>/cbflib-0.9.6+dfsg1/examples/adscimg2cbf.c:1: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /<>/cbflib-0.9.6+dfsg1/examples/adscimg2cbf.c: In function ‘main’: /<>/cbflib-0.9.6+dfsg1/examples/adscimg2cbf.c:245:27: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 245 | strstrhit = cbf_cistrnstr(argv[iarg], flags[j], strlen(flags[j])); | ^ /<>/cbflib-0.9.6+dfsg1/examples/adscimg2cbf.c:176:10: warning: unused variable ‘thickness’ [-Wunused-variable] 176 | double thickness=0.; | ^~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/examples/adscimg2cbf.c:162:7: warning: variable ‘cbf_status’ set but not used [-Wunused-but-set-variable] 162 | int cbf_status; | ^~~~~~~~~~ In file included from /usr/include/string.h:519, from /<>/cbflib-0.9.6+dfsg1/examples/adscimg2cbf.c:13: In function ‘strncpy’, inlined from ‘gethd.constprop’ at /<>/cbflib-0.9.6+dfsg1/examples/adscimg2cbf.c:31:3: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/examples/adscimg2cbf.c: In function ‘gethd.constprop’: /<>/cbflib-0.9.6+dfsg1/examples/adscimg2cbf.c:28:7: note: length computed here 28 | l = strlen (field); | ^~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5public.h:35, from /usr/include/hdf5/serial/hdf5.h:22, from /<>/cbflib-0.9.6+dfsg1/include/cbf.h:253, from /<>/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:177: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /<>/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c: In function ‘adscimg2cbf_sub2’: /<>/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:793:20: warning: passing argument 1 of ‘convertroi’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 793 | if (convertroi(roi, smv_size1, smv_size2, | ^~~ /<>/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:433:22: note: expected ‘char *’ but argument is of type ‘const char *’ 433 | int convertroi(char *roi, int fastdim, int slowdim, | ~~~~~~^~~ /<>/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:1727:27: warning: passing argument 1 of ‘cbf_free_text’ from incompatible pointer type [-Wincompatible-pointer-types] 1727 | cbf_free_text(&log,NULL); | ^~~~ | | | char ** In file included from /<>/cbflib-0.9.6+dfsg1/include/cbf_minicbf_header.h:262, from /<>/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:179: /<>/cbflib-0.9.6+dfsg1/include/cbf_alloc.h:274:33: note: expected ‘const char **’ but argument is of type ‘char **’ 274 | int cbf_free_text (const char **old_block, size_t *old_nelem); | ~~~~~~~~~~~~~^~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:1868:30: warning: variable ‘valmax’ set but not used [-Wunused-but-set-variable] 1868 | double valnew,valmin,valmax; | ^~~~~~ /<>/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:1868:16: warning: variable ‘valnew’ set but not used [-Wunused-but-set-variable] 1868 | double valnew,valmin,valmax; | ^~~~~~ /<>/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:530:27: warning: unused variable ‘kjcm’ [-Wunused-variable] 530 | int ki, kj, kicm, kjcm; | ^~~~ /<>/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:530:21: warning: unused variable ‘kicm’ [-Wunused-variable] 530 | int ki, kj, kicm, kjcm; | ^~~~ /<>/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:522:28: warning: variable ‘smv_bin_type’ set but not used [-Wunused-but-set-variable] 522 | int smv_bin, smv_adc, smv_bin_type; | ^~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c: In function ‘adscimg2cbf_sub’: /<>/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:2075:34: warning: passing argument 4 of ‘adscimg2cbf_sub2’ makes integer from pointer without a cast [-Wint-conversion] 2075 | NULL,NULL,NULL,NULL, | ^~~~ | | | void * /<>/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:481:29: note: expected ‘size_t’ {aka ‘long unsigned int’} but argument is of type ‘void *’ 481 | size_t old_int_data_size, | ~~~~~~~^~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:519, from /<>/cbflib-0.9.6+dfsg1/include/cbf_minicbf_header.h:264, from /<>/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:179: In function ‘strncpy’, inlined from ‘gethd.constprop’ at /<>/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:263:3: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c: In function ‘gethd.constprop’: /<>/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:260:7: note: length computed here 260 | l = strlen (field); | ^~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c: In function ‘adscimg2cbf_sub2’: /<>/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:588:29: warning: ‘; ’ directive writing 2 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 588 | sprintf(temp, "%s=%s;\n", s, s1); | ^~~ In file included from /usr/include/stdio.h:866, from /usr/include/hdf5/serial/H5Epublic.h:20, from /usr/include/hdf5/serial/hdf5.h:26, from /<>/cbflib-0.9.6+dfsg1/include/cbf.h:253, from /<>/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:177: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output 4 or more bytes (assuming 1027) into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:1846:53: warning: ‘smooth_data_as_int’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1846 | if (ki > 0 && smooth_data_as_int[(ki-1)*(1+fasthigh-fastlow+fastpadlow+fastpadhigh)/(bin+1)+kj] > 0) { | ^ mkdir -p /<>/cbflib-0.9.6+dfsg1/bin gcc -g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/<>/cbflib-0.9.6+dfsg1/include -I/<>/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \ /<>/cbflib-0.9.6+dfsg1/examples/arvai_test.c -L/<>/cbflib-0.9.6+dfsg1/lib \ -lcbf -lm -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -o /<>/cbflib-0.9.6+dfsg1/bin/arvai_test mkdir -p /<>/cbflib-0.9.6+dfsg1/bin gcc -g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -D_SVID_SOURCE -I/<>/cbflib-0.9.6+dfsg1/include -I/<>/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \ /<>/cbflib-0.9.6+dfsg1/examples/cbf2adscimg.c /<>/cbflib-0.9.6+dfsg1/examples/cbf2adscimg_sub.c -L/<>/cbflib-0.9.6+dfsg1/lib \ -lcbf -lm -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -o /<>/cbflib-0.9.6+dfsg1/bin/cbf2adscimg In file included from /usr/include/x86_64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /<>/cbflib-0.9.6+dfsg1/examples/cbf2adscimg.c:1: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from /usr/include/string.h:519, from /<>/cbflib-0.9.6+dfsg1/examples/cbf2adscimg.c:3: In function ‘strncpy’, inlined from ‘gethd’ at /<>/cbflib-0.9.6+dfsg1/examples/cbf2adscimg.c:21:3: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/examples/cbf2adscimg.c: In function ‘gethd’: /<>/cbflib-0.9.6+dfsg1/examples/cbf2adscimg.c:18:7: note: length computed here 18 | l = strlen (field); | ^~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5public.h:35, from /usr/include/hdf5/serial/hdf5.h:22, from /<>/cbflib-0.9.6+dfsg1/include/cbf.h:253, from /<>/cbflib-0.9.6+dfsg1/examples/cbf2adscimg_sub.c:126: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /<>/cbflib-0.9.6+dfsg1/examples/cbf2adscimg_sub.c: In function ‘padhd’: /<>/cbflib-0.9.6+dfsg1/examples/cbf2adscimg_sub.c:217:3: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 217 | for ( hp=header; *hp != '}'; hp++); hp++; | ^~~ /<>/cbflib-0.9.6+dfsg1/examples/cbf2adscimg_sub.c:217:39: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 217 | for ( hp=header; *hp != '}'; hp++); hp++; | ^~ /<>/cbflib-0.9.6+dfsg1/examples/cbf2adscimg_sub.c: In function ‘cbfhandle2img_sub’: /<>/cbflib-0.9.6+dfsg1/examples/cbf2adscimg_sub.c:247:57: warning: variable ‘dirinc’ set but not used [-Wunused-but-set-variable] 247 | int i, k, colrow, first, second,dirsta[2], dirend[2], dirinc[2]; | ^~~~~~ /<>/cbflib-0.9.6+dfsg1/examples/cbf2adscimg_sub.c:247:46: warning: variable ‘dirend’ set but not used [-Wunused-but-set-variable] 247 | int i, k, colrow, first, second,dirsta[2], dirend[2], dirinc[2]; | ^~~~~~ /<>/cbflib-0.9.6+dfsg1/examples/cbf2adscimg_sub.c:247:35: warning: variable ‘dirsta’ set but not used [-Wunused-but-set-variable] 247 | int i, k, colrow, first, second,dirsta[2], dirend[2], dirinc[2]; | ^~~~~~ /<>/cbflib-0.9.6+dfsg1/examples/cbf2adscimg_sub.c:247:28: warning: variable ‘second’ set but not used [-Wunused-but-set-variable] 247 | int i, k, colrow, first, second,dirsta[2], dirend[2], dirinc[2]; | ^~~~~~ /<>/cbflib-0.9.6+dfsg1/examples/cbf2adscimg_sub.c:247:21: warning: variable ‘first’ set but not used [-Wunused-but-set-variable] 247 | int i, k, colrow, first, second,dirsta[2], dirend[2], dirinc[2]; | ^~~~~ /<>/cbflib-0.9.6+dfsg1/examples/cbf2adscimg_sub.c:247:13: warning: variable ‘colrow’ set but not used [-Wunused-but-set-variable] 247 | int i, k, colrow, first, second,dirsta[2], dirend[2], dirinc[2]; | ^~~~~~ mkdir -p /<>/cbflib-0.9.6+dfsg1/bin gcc -g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/<>/cbflib-0.9.6+dfsg1/include -I/<>/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \ /<>/cbflib-0.9.6+dfsg1/examples/cbf2nexus.c -L/<>/cbflib-0.9.6+dfsg1/lib \ -lcbf -lm -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -o /<>/cbflib-0.9.6+dfsg1/bin/cbf2nexus mkdir -p /<>/cbflib-0.9.6+dfsg1/bin g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/<>/cbflib-0.9.6+dfsg1/include -I/<>/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \ /<>/cbflib-0.9.6+dfsg1/examples/cif2c.c -L/<>/cbflib-0.9.6+dfsg1/lib \ -lcbf -lm -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -o /<>/cbflib-0.9.6+dfsg1/bin/cif2c bash: line 1: g: command not found make[2]: [Makefile:1771: /<>/cbflib-0.9.6+dfsg1/bin/cif2c] Error 127 (ignored) rm -f /<>/cbflib-0.9.6+dfsg1/solib/libcbf.so rm -f *.o mkdir -p /<>/cbflib-0.9.6+dfsg1/solib gcc -g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -DCBF_REGEXLIB_REGEX -fPIC -I/<>/cbflib-0.9.6+dfsg1/include -I/<>/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial -c /<>/cbflib-0.9.6+dfsg1/src/cbf.c /<>/cbflib-0.9.6+dfsg1/src/cbf_airy_disk.c /<>/cbflib-0.9.6+dfsg1/src/cbf_alloc.c /<>/cbflib-0.9.6+dfsg1/src/cbf_ascii.c /<>/cbflib-0.9.6+dfsg1/src/cbf_binary.c /<>/cbflib-0.9.6+dfsg1/src/cbf_byte_offset.c /<>/cbflib-0.9.6+dfsg1/src/cbf_canonical.c /<>/cbflib-0.9.6+dfsg1/src/cbf_codes.c /<>/cbflib-0.9.6+dfsg1/src/cbf_compress.c /<>/cbflib-0.9.6+dfsg1/src/cbf_context.c /<>/cbflib-0.9.6+dfsg1/src/cbf_copy.c /<>/cbflib-0.9.6+dfsg1/src/cbf_file.c /<>/cbflib-0.9.6+dfsg1/src/cbf_getopt.c /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5_filter.c /<>/cbflib-0.9.6+dfsg1/src/cbf_lex.c /<>/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c /<>/cbflib-0.9.6+dfsg1/src/cbf_nibble_offset.c /<>/cbflib-0.9.6+dfsg1/src/cbf_packed.c /<>/cbflib-0.9.6+dfsg1/src/cbf_predictor.c /<>/cbflib-0.9.6+dfsg1/src/cbf_read_binary.c /<>/cbflib-0.9.6+dfsg1/src/cbf_read_mime.c /<>/cbflib-0.9.6+dfsg1/src/cbf_simple.c /<>/cbflib-0.9.6+dfsg1/src/cbf_string.c /<>/cbflib-0.9.6+dfsg1/src/cbf_stx.c /<>/cbflib-0.9.6+dfsg1/src/cbf_tree.c /<>/cbflib-0.9.6+dfsg1/src/cbf_uncompressed.c /<>/cbflib-0.9.6+dfsg1/src/cbf_write.c /<>/cbflib-0.9.6+dfsg1/src/cbf_write_binary.c /<>/cbflib-0.9.6+dfsg1/src/cbf_ws.c /<>/cbflib-0.9.6+dfsg1/src/cbff.c /<>/cbflib-0.9.6+dfsg1/src/md5c.c /<>/cbflib-0.9.6+dfsg1/src/img.c /<>/cbflib-0.9.6+dfsg1/src/fgetln.c In file included from /usr/include/string.h:519, from /<>/cbflib-0.9.6+dfsg1/src/cbf.c:266: In function ‘strncpy’, inlined from ‘cbf_validate’ at /<>/cbflib-0.9.6+dfsg1/src/cbf.c:7605:6: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ output may be truncated copying 80 bytes from a string of length 81 [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncpy’, inlined from ‘cbf_validate’ at /<>/cbflib-0.9.6+dfsg1/src/cbf.c:7686:25: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ output may be truncated copying 80 bytes from a string of length 81 [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:519, from /<>/cbflib-0.9.6+dfsg1/src/cbf_context.c:262: In function ‘strncpy’, inlined from ‘cbf_copy_string’ at /<>/cbflib-0.9.6+dfsg1/src/cbf_context.c:937:21: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_context.c: In function ‘cbf_copy_string’: /<>/cbflib-0.9.6+dfsg1/src/cbf_context.c:909:13: note: length computed here 909 | n = strlen(string); | ^~~~~~~~~~~~~~ In file included from /usr/include/string.h:519, from /<>/cbflib-0.9.6+dfsg1/src/cbf_context.c:262: In function ‘strncpy’, inlined from ‘cbf_copy_string’ at /<>/cbflib-0.9.6+dfsg1/src/cbf_context.c:922:21: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_context.c: In function ‘cbf_copy_string’: /<>/cbflib-0.9.6+dfsg1/src/cbf_context.c:909:13: note: length computed here 909 | n = strlen(string); | ^~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function ‘cbf_write_nx2cbf__cbfcat_op’: /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:20819:38: warning: implicit declaration of function ‘cbf_read_h5file_group’; did you mean ‘cbf_read_h5file’? [-Wimplicit-function-declaration] 20819 | error |= cbf_read_h5file_group(cbf,nx,nx->flags,(hid_t)object); | ^~~~~~~~~~~~~~~~~~~~~ | cbf_read_h5file /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:20811:48: warning: unused variable ‘indent’ [-Wunused-variable] 20811 | const unsigned int indent = table->indent; | ^~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:20784:31: warning: unused variable ‘nxpdb_found’ [-Wunused-variable] 20784 | const int nxpdb_found = _cbf_Attrval(object,"NXpdb_class", &NXpdb_class); | ^~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function ‘cbf_write_nx2cbf__cbfdb_op’: /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:20933:48: warning: unused variable ‘indent’ [-Wunused-variable] 20933 | const unsigned int indent = table->indent; | ^~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:20906:31: warning: unused variable ‘nxpdb_found’ [-Wunused-variable] 20906 | const int nxpdb_found = _cbf_Attrval(object,"NXpdb_class", &NXpdb_class); | ^~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function ‘cbf_write_nx2cbf__entry_op’: /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:21797:48: warning: unused variable ‘indent’ [-Wunused-variable] 21797 | const unsigned int indent = table->indent; | ^~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:21716:31: warning: unused variable ‘nxpdb_found’ [-Wunused-variable] 21716 | const int nxpdb_found = _cbf_Attrval(object,"NXpdb_class", &NXpdb_class); | ^~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function ‘cbf_write_nx2cbf’: /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22516:36: warning: variable ‘node’ set but not used [-Wunused-but-set-variable] 22516 | cbf_node * node = NULL; | ^~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22769:25: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 22769 | if (pixel_offset_name[i]) free((void*)pixel_offset_name[i]);pixel_offset_name[i]=NULL; | ^~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22769:85: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 22769 | if (pixel_offset_name[i]) free((void*)pixel_offset_name[i]);pixel_offset_name[i]=NULL; | ^~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22770:25: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 22770 | if (pixel_offset_long_name[i]) free((void*)pixel_offset_long_name[i]);pixel_offset_long_name[i]=NULL; | ^~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22770:95: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 22770 | if (pixel_offset_long_name[i]) free((void*)pixel_offset_long_name[i]);pixel_offset_long_name[i]=NULL; | ^~~~~~~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22771:25: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 22771 | if (pixel_size_name[i]) free((void*)pixel_size_name[i]);pixel_size_name[i]=NULL; | ^~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22771:81: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 22771 | if (pixel_size_name[i]) free((void*)pixel_size_name[i]);pixel_size_name[i]=NULL; | ^~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22110:30: warning: variable ‘data_row’ set but not used [-Wunused-but-set-variable] 22110 | unsigned int data_row = ~0x0; | ^~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22836:32: warning: variable ‘diffrn_scan_axis’ set but not used [-Wunused-but-set-variable] 22836 | cbf_node * diffrn_scan_axis = NULL; | ^~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function ‘cbf_write_cbf2nx__array_structure_list_axis’: /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:26493:50: warning: unused variable ‘rotation_axis_path’ [-Wunused-variable] 26493 | const char * rotation_axis_path = NULL; | ^~~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function ‘cbf_write_cbf2nx__cbf_general_axes’: /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:26704:26: warning: unused variable ‘equipment_component’ [-Wunused-variable] 26704 | const char * equipment_component = NULL; | ^~~~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function ‘cbf_write_cbf2nx__axis’: /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:27034:28: warning: variable ‘axis_rotation_axis’ set but not used [-Wunused-but-set-variable] 27034 | cbf_node * axis_rotation_axis = NULL; | ^~~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function ‘cbf_h5ds_store_as_column’: /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:29166:40: warning: unused variable ‘close’ [-Wunused-variable] 29166 | char open, close; | ^~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:29166:34: warning: unused variable ‘open’ [-Wunused-variable] 29166 | char open, close; | ^~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:28931:21: warning: variable ‘type_order’ set but not used [-Wunused-but-set-variable] 28931 | H5T_order_t type_order; | ^~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:28925:16: warning: unused variable ‘byte_order’ [-Wunused-variable] 28925 | char * byte_order; | ^~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:28903:14: warning: unused variable ‘buffer’ [-Wunused-variable] 28903 | char buffer[25]; | ^~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function ‘cbf_object_visit’: /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:30752:42: warning: variable ‘checked_digest’ set but not used [-Wunused-but-set-variable] 30752 | int binary_id, bits, sign, type, checked_digest, realarray = 0; | ^~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:30752:36: warning: variable ‘type’ set but not used [-Wunused-but-set-variable] 30752 | int binary_id, bits, sign, type, checked_digest, realarray = 0; | ^~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:30708:32: warning: variable ‘atcbf’ set but not used [-Wunused-but-set-variable] 30708 | int save_incbf, incbf, atcbf; /* within or at NXpdb or CBF_cif, etc. */ | ^~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:30707:36: warning: unused variable ‘atnexus’ [-Wunused-variable] 30707 | int save_innexus, innexus, atnexus; /* within or at NXentry */ | ^~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function ‘cbf_read_h5file_group’: /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:31937:13: warning: unused variable ‘errorcode’ [-Wunused-variable] 31937 | int errorcode = 0; | ^~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:31933:19: warning: unused variable ‘node’ [-Wunused-variable] 31933 | cbf_node *node; | ^~~~ At top level: /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:20853:16: warning: ‘cbf_write_nx2cbf__cbfdb_op’ defined but not used [-Wunused-function] 20853 | static int cbf_write_nx2cbf__cbfdb_op | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:20641:16: warning: ‘cbf_write_nx2cbf__cbfcat_op’ defined but not used [-Wunused-function] 20641 | static int cbf_write_nx2cbf__cbfcat_op | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:9133:16: warning: ‘cbf_require_nxdetectors’ defined but not used [-Wunused-function] 9133 | static int cbf_require_nxdetectors(const cbf_handle handle, | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function ‘cbf_get_nxdata_field_name2.isra’: /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:6345:37: warning: ‘%06d’ directive writing between 6 and 10 bytes into a region of size 7 [-Wformat-overflow=] 6345 | sprintf(buffer,"%06d",block); | ^~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:6345:36: note: directive argument in the range [1, 2147483647] 6345 | sprintf(buffer,"%06d",block); | ^~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/hdf5/serial/H5Epublic.h:20, from /usr/include/hdf5/serial/hdf5.h:26, from /<>/cbflib-0.9.6+dfsg1/include/cbf.h:253, from /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:258: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 7 and 11 bytes into a destination of size 7 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:519, from /<>/cbflib-0.9.6+dfsg1/include/cbf_hdf5.h:265, from /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:260: In function ‘strncat’, inlined from ‘cbf_create_h5handle2’ at /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:17932:9: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:122:10: warning: ‘__builtin___strncat_chk’ output may be truncated copying 10 bytes from a string of length 11 [-Wstringop-truncation] 122 | return __builtin___strncat_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncat’, inlined from ‘cbf_create_h5handle2’ at /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:17934:9: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:122:10: warning: ‘__builtin___strncat_chk’ output may be truncated copying 50 bytes from a string of length 53 [-Wstringop-truncation] 122 | return __builtin___strncat_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncat’, inlined from ‘cbf_create_h5handle2u’ at /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:18014:9: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:122:10: warning: ‘__builtin___strncat_chk’ output may be truncated copying 10 bytes from a string of length 11 [-Wstringop-truncation] 122 | return __builtin___strncat_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strncat’, inlined from ‘cbf_create_h5handle2u’ at /<>/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:18016:9: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:122:10: warning: ‘__builtin___strncat_chk’ output may be truncated copying 50 bytes from a string of length 53 [-Wstringop-truncation] 122 | return __builtin___strncat_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:519, from /<>/cbflib-0.9.6+dfsg1/include/cbf_minicbf_header.h:264, from /<>/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c:259: In function ‘strncpy’, inlined from ‘cbf_append_string.part.0’ at /<>/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c:325:9: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c: In function ‘cbf_append_string.part.0’: /<>/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c:302:18: note: length computed here 302 | srclen = strlen(src); | ^~~~~~~~~~~ In file included from /usr/include/string.h:519, from /<>/cbflib-0.9.6+dfsg1/include/cbf_minicbf_header.h:264, from /<>/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c:259: In function ‘strncpy’, inlined from ‘cbf_append_string’ at /<>/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c:325:9, inlined from ‘cbf_append_string’ at /<>/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c:293:16, inlined from ‘cbf_set_minicbf_header’ at /<>/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c:429:13: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ output truncated before terminating nul copying 1 byte from a string of the same length [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_nibble_offset.c: In function ‘cbf_compress_nibble_offset’: /<>/cbflib-0.9.6+dfsg1/src/cbf_nibble_offset.c:936:21: warning: ‘dmode[0]’ may be used uninitialized in this function [-Wmaybe-uninitialized] 936 | curmode = dmode[inrun]; | ~~~~~~~~^~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_simple.c: In function ‘cbf_set_reference_beam_center’: /<>/cbflib-0.9.6+dfsg1/src/cbf_simple.c:8587:44: warning: variable ‘ncenter2’ set but not used [-Wunused-but-set-variable] 8587 | double nindex1, nindex2, ncenter1, ncenter2; | ^~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_simple.c:8587:34: warning: variable ‘ncenter1’ set but not used [-Wunused-but-set-variable] 8587 | double nindex1, nindex2, ncenter1, ncenter2; | ^~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/cbf_stx.c: In function ‘cbf_lex_wrapper’: /<>/cbflib-0.9.6+dfsg1/src/cbf_stx.c:370:13: warning: variable ‘cbffile’ set but not used [-Wunused-but-set-variable] 370 | cbf_file *cbffile; | ^~~~~~~ At top level: /<>/cbflib-0.9.6+dfsg1/src/cbf_stx.c:827:26: warning: ‘yytname’ defined but not used [-Wunused-const-variable=] 827 | static const char *const yytname[] = | ^~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/img.c: In function ‘img_read_mar345header’: /<>/cbflib-0.9.6+dfsg1/src/img.c:1334:44: warning: array subscript -1 is outside array bounds of ‘char[65]’ [-Warray-bounds] 1334 | for (C = C64+strlen(C64)-1; (C != C64-1 && *C == ' '); C-- ) *C = '\0'; | ~~~^~ /<>/cbflib-0.9.6+dfsg1/src/img.c:1230:8: note: while referencing ‘C64’ 1230 | char C64[65], D64[65], *C, *D, *E; | ^~~ gcc -o /<>/cbflib-0.9.6+dfsg1/solib/libcbf.so *.o -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname -Wl,libcbf.so.1 -lm -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 rm -f *.o mkdir -p /<>/cbflib-0.9.6+dfsg1/bin gcc -g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/<>/cbflib-0.9.6+dfsg1/include -I/<>/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \ /<>/cbflib-0.9.6+dfsg1/examples/cif2cbf.c -L/<>/cbflib-0.9.6+dfsg1/lib \ -lcbf -lm -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -o /<>/cbflib-0.9.6+dfsg1/bin/cif2cbf In file included from /usr/include/string.h:519, from /<>/cbflib-0.9.6+dfsg1/include/cbf_hdf5.h:265, from /<>/cbflib-0.9.6+dfsg1/examples/cif2cbf.c:465: In function ‘strncpy’, inlined from ‘main’ at /<>/cbflib-0.9.6+dfsg1/examples/cif2cbf.c:2015:25: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound depends on the length of the source argument [-Wstringop-overflow=] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/examples/cif2cbf.c: In function ‘main’: /<>/cbflib-0.9.6+dfsg1/examples/cif2cbf.c:2012:28: note: length computed here 2012 | dbsz = strlen(datablock_name+idb); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ mkdir -p /<>/cbflib-0.9.6+dfsg1/bin gcc -g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -D_SVID_SOURCE -I/<>/cbflib-0.9.6+dfsg1/include -I/<>/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \ /<>/cbflib-0.9.6+dfsg1/examples/cbf_standardize_numbers.c /<>/cbflib-0.9.6+dfsg1/src/fgetln.c -lm -o /<>/cbflib-0.9.6+dfsg1/bin/cbf_standardize_numbers In file included from /usr/include/hdf5/serial/H5public.h:35, from /usr/include/hdf5/serial/hdf5.h:22, from /<>/cbflib-0.9.6+dfsg1/include/cbf.h:253, from /<>/cbflib-0.9.6+dfsg1/examples/cbf_standardize_numbers.c:9: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /<>/cbflib-0.9.6+dfsg1/examples/cbf_standardize_numbers.c: In function ‘main’: /<>/cbflib-0.9.6+dfsg1/examples/cbf_standardize_numbers.c:60:24: warning: ‘%d’ directive writing between 1 and 10 bytes into a region of size 8 [-Wformat-overflow=] 60 | sprintf(format,"%%.%dg ",(digits>0)?digits+1:0); | ^~ /<>/cbflib-0.9.6+dfsg1/examples/cbf_standardize_numbers.c:60:20: note: directive argument in the range [0, 2147483647] 60 | sprintf(format,"%%.%dg ",(digits>0)?digits+1:0); | ^~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/hdf5/serial/H5Epublic.h:20, from /usr/include/hdf5/serial/hdf5.h:26, from /<>/cbflib-0.9.6+dfsg1/include/cbf.h:253, from /<>/cbflib-0.9.6+dfsg1/examples/cbf_standardize_numbers.c:9: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 6 and 15 bytes into a destination of size 10 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/x86_64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /<>/cbflib-0.9.6+dfsg1/src/fgetln.c:30: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ mkdir -p /<>/cbflib-0.9.6+dfsg1/bin gcc -g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/<>/cbflib-0.9.6+dfsg1/include -I/<>/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \ /<>/cbflib-0.9.6+dfsg1/examples/convert_image.c /<>/cbflib-0.9.6+dfsg1/src/img.c -L/<>/cbflib-0.9.6+dfsg1/lib \ -lcbf -lm -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -o /<>/cbflib-0.9.6+dfsg1/bin/convert_image /<>/cbflib-0.9.6+dfsg1/examples/convert_image.c: In function ‘main’: /<>/cbflib-0.9.6+dfsg1/examples/convert_image.c:533:7: warning: variable ‘transpose’ set but not used [-Wunused-but-set-variable] 533 | int transpose; | ^~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/img.c: In function ‘img_read_mar345header’: /<>/cbflib-0.9.6+dfsg1/src/img.c:1334:44: warning: array subscript -1 is outside array bounds of ‘char[65]’ [-Warray-bounds] 1334 | for (C = C64+strlen(C64)-1; (C != C64-1 && *C == ' '); C-- ) *C = '\0'; | ~~~^~ /<>/cbflib-0.9.6+dfsg1/src/img.c:1230:8: note: while referencing ‘C64’ 1230 | char C64[65], D64[65], *C, *D, *E; | ^~~ In file included from /usr/include/string.h:519, from /<>/cbflib-0.9.6+dfsg1/src/img.c:12: In function ‘memcpy’, inlined from ‘img_set_tags’ at /<>/cbflib-0.9.6+dfsg1/src/img.c:1784:7, inlined from ‘img_set_tags’ at /<>/cbflib-0.9.6+dfsg1/src/img.c:1761:5, inlined from ‘img_free_handle’ at /<>/cbflib-0.9.6+dfsg1/src/img.c:1844:3: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:29:10: warning: ‘__builtin___memcpy_chk’ writing between 18446744039349813248 and 18446744073709551600 bytes into a region of size 0 [-Wstringop-overflow=] 29 | return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/src/img.c: In function ‘img_free_handle’: /<>/cbflib-0.9.6+dfsg1/src/img.c:1773:28: note: at offset 0 to an object with size 0 allocated by ‘malloc’ here 1773 | img->tag = (img_tag *) malloc (tags * sizeof (img_tag)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/bin/ld: /tmp/cc4Bflcg.o: in function `main': ././examples/convert_image.c:672: warning: the use of `mktemp' is dangerous, better use `mkstemp' or `mkdtemp' mkdir -p /<>/cbflib-0.9.6+dfsg1/bin gcc -g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/<>/cbflib-0.9.6+dfsg1/include -I/<>/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \ /<>/cbflib-0.9.6+dfsg1/examples/convert_minicbf.c -L/<>/cbflib-0.9.6+dfsg1/lib \ -lcbf -lm -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -o /<>/cbflib-0.9.6+dfsg1/bin/convert_minicbf chmod 755 /<>/cbflib-0.9.6+dfsg1/examples/batch_convert_minicbf.sh mkdir -p /<>/cbflib-0.9.6+dfsg1/bin gcc -g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/<>/cbflib-0.9.6+dfsg1/include -I/<>/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \ /<>/cbflib-0.9.6+dfsg1/examples/img2cif.c -L/<>/cbflib-0.9.6+dfsg1/lib \ -lcbf -lm -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -o /<>/cbflib-0.9.6+dfsg1/bin/img2cif gcc -g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/<>/cbflib-0.9.6+dfsg1/include -I/<>/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \ /<>/cbflib-0.9.6+dfsg1/examples/makecbf.c -L/<>/cbflib-0.9.6+dfsg1/lib \ -lcbf -lm -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -o /<>/cbflib-0.9.6+dfsg1/bin/makecbf gcc -g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/<>/cbflib-0.9.6+dfsg1/include -I/<>/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \ /<>/cbflib-0.9.6+dfsg1/examples/minicbf2nexus.c -L/<>/cbflib-0.9.6+dfsg1/lib \ -lcbf -lm -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -o /<>/cbflib-0.9.6+dfsg1/bin/minicbf2nexus mkdir -p /<>/cbflib-0.9.6+dfsg1/bin gcc -g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/<>/cbflib-0.9.6+dfsg1/include -I/<>/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \ /<>/cbflib-0.9.6+dfsg1/examples/nexus2cbf.c -L/<>/cbflib-0.9.6+dfsg1/lib \ -lcbf -lm -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -o /<>/cbflib-0.9.6+dfsg1/bin/nexus2cbf mkdir -p /<>/cbflib-0.9.6+dfsg1/bin gcc -g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/<>/cbflib-0.9.6+dfsg1/include -I/<>/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \ /<>/cbflib-0.9.6+dfsg1/examples/roi_peaksearch.c /<>/cbflib-0.9.6+dfsg1/examples/dps_peaksearch.c -L/<>/cbflib-0.9.6+dfsg1/lib \ -lcbf -lm -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -o /<>/cbflib-0.9.6+dfsg1/bin/roi_peaksearch mkdir -p /<>/cbflib-0.9.6+dfsg1/bin gcc -g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/<>/cbflib-0.9.6+dfsg1/include -I/<>/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \ /<>/cbflib-0.9.6+dfsg1/examples/sequence_match.c -L/<>/cbflib-0.9.6+dfsg1/lib \ -lcbf -lm -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -o /<>/cbflib-0.9.6+dfsg1/bin/sequence_match mkdir -p /<>/cbflib-0.9.6+dfsg1/bin g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/<>/cbflib-0.9.6+dfsg1/include -I/<>/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \ /<>/cbflib-0.9.6+dfsg1/examples/testcell.C -L/<>/cbflib-0.9.6+dfsg1/lib \ -lcbf -lm -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -o /<>/cbflib-0.9.6+dfsg1/bin/testcell bash: line 1: g: command not found make[2]: [Makefile:1762: /<>/cbflib-0.9.6+dfsg1/bin/testcell] Error 127 (ignored) mkdir -p /<>/cbflib-0.9.6+dfsg1/bin gcc -g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/<>/cbflib-0.9.6+dfsg1/include -I/<>/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial /<>/cbflib-0.9.6+dfsg1/examples/testalloc.c -L/<>/cbflib-0.9.6+dfsg1/lib /<>/cbflib-0.9.6+dfsg1/lib/libcbf.a -lm -o /<>/cbflib-0.9.6+dfsg1/bin/testalloc.tmp mv /<>/cbflib-0.9.6+dfsg1/bin/testalloc.tmp /<>/cbflib-0.9.6+dfsg1/bin/testalloc mkdir -p /<>/cbflib-0.9.6+dfsg1/bin gcc -g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/<>/cbflib-0.9.6+dfsg1/include -I/<>/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \ /<>/cbflib-0.9.6+dfsg1/examples/testreals.c -L/<>/cbflib-0.9.6+dfsg1/lib \ -lcbf -lm -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -o /<>/cbflib-0.9.6+dfsg1/bin/testreals mkdir -p /<>/cbflib-0.9.6+dfsg1/bin gcc -g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/<>/cbflib-0.9.6+dfsg1/include -I/<>/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \ /<>/cbflib-0.9.6+dfsg1/examples/testflat.c -L/<>/cbflib-0.9.6+dfsg1/lib \ -lcbf -lm -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -o /<>/cbflib-0.9.6+dfsg1/bin/testflat mkdir -p /<>/cbflib-0.9.6+dfsg1/bin gcc -g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/<>/cbflib-0.9.6+dfsg1/include -I/<>/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \ /<>/cbflib-0.9.6+dfsg1/examples/testflatpacked.c -L/<>/cbflib-0.9.6+dfsg1/lib \ -lcbf -lm -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -o /<>/cbflib-0.9.6+dfsg1/bin/testflatpacked mkdir -p /<>/cbflib-0.9.6+dfsg1/bin gcc -g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/<>/cbflib-0.9.6+dfsg1/include -I/<>/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \ /<>/cbflib-0.9.6+dfsg1/examples/testhdf5.c -L/<>/cbflib-0.9.6+dfsg1/lib /<>/cbflib-0.9.6+dfsg1/lib/libcbf.a -lm -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -o /<>/cbflib-0.9.6+dfsg1/bin/testhdf5.tmp mv /<>/cbflib-0.9.6+dfsg1/bin/testhdf5.tmp /<>/cbflib-0.9.6+dfsg1/bin/testhdf5 mkdir -p /<>/cbflib-0.9.6+dfsg1/bin gcc -g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/<>/cbflib-0.9.6+dfsg1/include -I/<>/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial /<>/cbflib-0.9.6+dfsg1/examples/test_cbf_airy_disk.c -L/<>/cbflib-0.9.6+dfsg1/lib /<>/cbflib-0.9.6+dfsg1/lib/libcbf.a -lm -o /<>/cbflib-0.9.6+dfsg1/bin/test_cbf_airy_disk.tmp mv /<>/cbflib-0.9.6+dfsg1/bin/test_cbf_airy_disk.tmp /<>/cbflib-0.9.6+dfsg1/bin/test_cbf_airy_disk mkdir -p /<>/cbflib-0.9.6+dfsg1/bin gcc -g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/<>/cbflib-0.9.6+dfsg1/include -I/<>/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial /<>/cbflib-0.9.6+dfsg1/examples/cbf_testxfelread.c -L/<>/cbflib-0.9.6+dfsg1/lib /<>/cbflib-0.9.6+dfsg1/lib/libcbf.a -lm -o /<>/cbflib-0.9.6+dfsg1/bin/cbf_testxfelread.tmp mv /<>/cbflib-0.9.6+dfsg1/bin/cbf_testxfelread.tmp /<>/cbflib-0.9.6+dfsg1/bin/cbf_testxfelread make[2]: Leaving directory '/<>/cbflib-0.9.6+dfsg1' # build the python extension. /usr/bin/make 'C++:=$(CXX)' /<>/cbflib-0.9.6+dfsg1/pycbf/setup.py make[2]: Entering directory '/<>/cbflib-0.9.6+dfsg1' make[2]: '/<>/cbflib-0.9.6+dfsg1/pycbf/setup.py' is up to date. make[2]: Leaving directory '/<>/cbflib-0.9.6+dfsg1' dh_auto_build --buildsystem=pybuild --sourcedirectory=pycbf I: pybuild base:232: /usr/bin/python3 setup.py build running build running build_py copying pycbf.py -> /<>/cbflib-0.9.6+dfsg1/.pybuild/cpython3_3.9_pycbf/build running build_ext building '_pycbf' extension creating build creating build/src creating build/temp.linux-x86_64-3.9 x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../include -I/include -I/usr/include/python3.9 -c ../src/cbf_simple.c -o build/temp.linux-x86_64-3.9/../src/cbf_simple.o -I/usr/include/hdf5/serial ../src/cbf_simple.c: In function ‘cbf_set_reference_beam_center’: ../src/cbf_simple.c:8587:44: warning: variable ‘ncenter2’ set but not used [-Wunused-but-set-variable] 8587 | double nindex1, nindex2, ncenter1, ncenter2; | ^~~~~~~~ ../src/cbf_simple.c:8587:34: warning: variable ‘ncenter1’ set but not used [-Wunused-but-set-variable] 8587 | double nindex1, nindex2, ncenter1, ncenter2; | ^~~~~~~~ x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../include -I/include -I/usr/include/python3.9 -c pycbf_wrap.c -o build/temp.linux-x86_64-3.9/pycbf_wrap.o -I/usr/include/hdf5/serial pycbf_wrap.c: In function ‘cbf_handle_struct_set_image’: pycbf_wrap.c:4074:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 4074 | void *array; | ^~~~~ pycbf_wrap.c:4072:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 4072 | size_t els; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_realarray_wdims’: pycbf_wrap.c:4289:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 4289 | void *array; | ^~~~~ pycbf_wrap.c:4288:21: warning: variable ‘ele’ set but not used [-Wunused-but-set-variable] 4288 | size_t els, ele; | ^~~ pycbf_wrap.c:4288:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 4288 | size_t els, ele; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_3d_image_fs’: pycbf_wrap.c:4383:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 4383 | void *array; | ^~~~~ pycbf_wrap.c:4381:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 4381 | size_t els; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_real_3d_image_sf’: pycbf_wrap.c:4418:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 4418 | void *array; | ^~~~~ pycbf_wrap.c:4416:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 4416 | size_t els; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_image_fs’: pycbf_wrap.c:4460:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 4460 | void *array; | ^~~~~ pycbf_wrap.c:4458:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 4458 | size_t els; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_real_3d_image’: pycbf_wrap.c:4611:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 4611 | void *array; | ^~~~~ pycbf_wrap.c:4609:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 4609 | size_t els; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_integerarray_wdims_sf’: pycbf_wrap.c:4634:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 4634 | void *array; | ^~~~~ pycbf_wrap.c:4633:21: warning: variable ‘ele’ set but not used [-Wunused-but-set-variable] 4633 | size_t els, ele; | ^~~ pycbf_wrap.c:4633:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 4633 | size_t els, ele; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_3d_image’: pycbf_wrap.c:4782:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 4782 | void *array; | ^~~~~ pycbf_wrap.c:4780:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 4780 | size_t els; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_integerarray_wdims’: pycbf_wrap.c:4832:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 4832 | void *array; | ^~~~~ pycbf_wrap.c:4831:21: warning: variable ‘ele’ set but not used [-Wunused-but-set-variable] 4831 | size_t els, ele; | ^~~ pycbf_wrap.c:4831:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 4831 | size_t els, ele; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_real_image_fs’: pycbf_wrap.c:4908:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 4908 | void *array; | ^~~~~ pycbf_wrap.c:4906:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 4906 | size_t els; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_real_image_sf’: pycbf_wrap.c:5004:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 5004 | void *array; | ^~~~~ pycbf_wrap.c:5002:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 5002 | size_t els; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_realarray_wdims_sf’: pycbf_wrap.c:5060:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 5060 | void *array; | ^~~~~ pycbf_wrap.c:5059:21: warning: variable ‘ele’ set but not used [-Wunused-but-set-variable] 5059 | size_t els, ele; | ^~~ pycbf_wrap.c:5059:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 5059 | size_t els, ele; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_real_image’: pycbf_wrap.c:5091:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 5091 | void *array; | ^~~~~ pycbf_wrap.c:5089:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 5089 | size_t els; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_3d_image_sf’: pycbf_wrap.c:5147:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 5147 | void *array; | ^~~~~ pycbf_wrap.c:5145:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 5145 | size_t els; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_integerarray’: pycbf_wrap.c:5223:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 5223 | void *array; | ^~~~~ pycbf_wrap.c:5222:21: warning: variable ‘ele’ set but not used [-Wunused-but-set-variable] 5222 | size_t els, ele; | ^~~ pycbf_wrap.c:5222:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 5222 | size_t els, ele; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_realarray’: pycbf_wrap.c:5295:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 5295 | void *array; | ^~~~~ pycbf_wrap.c:5294:21: warning: variable ‘ele’ set but not used [-Wunused-but-set-variable] 5294 | size_t els, ele; | ^~~ pycbf_wrap.c:5294:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 5294 | size_t els, ele; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_real_3d_image_fs’: pycbf_wrap.c:5380:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 5380 | void *array; | ^~~~~ pycbf_wrap.c:5378:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 5378 | size_t els; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_realarray_wdims_fs’: pycbf_wrap.c:5422:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 5422 | void *array; | ^~~~~ pycbf_wrap.c:5421:21: warning: variable ‘ele’ set but not used [-Wunused-but-set-variable] 5421 | size_t els, ele; | ^~~ pycbf_wrap.c:5421:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 5421 | size_t els, ele; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_integerarray_wdims_fs’: pycbf_wrap.c:5447:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 5447 | void *array; | ^~~~~ pycbf_wrap.c:5446:21: warning: variable ‘ele’ set but not used [-Wunused-but-set-variable] 5446 | size_t els, ele; | ^~~ pycbf_wrap.c:5446:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 5446 | size_t els, ele; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_image_sf’: pycbf_wrap.c:5468:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 5468 | void *array; | ^~~~~ pycbf_wrap.c:5466:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 5466 | size_t els; | ^~~ At top level: pycbf_wrap.c:3469:16: warning: ‘convert_iarray’ defined but not used [-Wunused-function] 3469 | static int convert_iarray(PyObject *input, int *ptr, int size) { | ^~~~~~~~~~~~~~ pycbf_wrap.c:3445:17: warning: ‘convert_larray’ defined but not used [-Wunused-function] 3445 | static long convert_larray(PyObject *input, long *ptr, int size) { | ^~~~~~~~~~~~~~ pycbf_wrap.c: In function ‘get_error_message’: pycbf_wrap.c:3510:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3510 | sprintf(error_message,"%s %s",error_message,"CBF_FORMAT "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3512:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3512 | sprintf(error_message,"%s %s",error_message,"CBF_ALLOC "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3514:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3514 | sprintf(error_message,"%s %s",error_message,"CBF_ARGUMENT "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3516:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3516 | sprintf(error_message,"%s %s",error_message,"CBF_ASCII "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3518:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3518 | sprintf(error_message,"%s %s",error_message,"CBF_BINARY "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3520:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3520 | sprintf(error_message,"%s %s",error_message,"CBF_BITCOUNT "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3522:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3522 | sprintf(error_message,"%s %s",error_message,"CBF_ENDOFDATA "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3524:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3524 | sprintf(error_message,"%s %s",error_message,"CBF_FILECLOSE "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3526:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3526 | sprintf(error_message,"%s %s",error_message,"CBF_FILEOPEN "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3528:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3528 | sprintf(error_message,"%s %s",error_message,"CBF_FILEREAD "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3530:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3530 | sprintf(error_message,"%s %s",error_message,"CBF_FILESEEK "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3532:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3532 | sprintf(error_message,"%s %s",error_message,"CBF_FILETELL "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3534:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3534 | sprintf(error_message,"%s %s",error_message,"CBF_FILEWRITE "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3536:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3536 | sprintf(error_message,"%s %s",error_message,"CBF_IDENTICAL "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3538:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3538 | sprintf(error_message,"%s %s",error_message,"CBF_NOTFOUND "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3540:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3540 | sprintf(error_message,"%s %s",error_message,"CBF_OVERFLOW "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3542:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3542 | sprintf(error_message,"%s %s",error_message,"CBF_UNDEFINED "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3544:31: warning: ‘%s’ directive writing 18 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3544 | sprintf(error_message,"%s %s",error_message,"CBF_NOTIMPLEMENTED"); | ^~ ~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 20 and 1043 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3546:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3546 | sprintf(error_message,"%s %s",error_message,"CBF_NOCOMPRESSION"); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:519, from /usr/include/python3.9/Python.h:30, from pycbf_wrap.c:149: In function ‘strncpy’, inlined from ‘cbf_handle_struct_get_integerarrayparameters_wdims_sf’ at pycbf_wrap.c:4980:9, inlined from ‘_wrap_cbf_handle_struct_get_integerarrayparameters_wdims_sf’ at pycbf_wrap.c:16981:5: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound depends on the length of the source argument [-Wstringop-overflow=] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c: In function ‘_wrap_cbf_handle_struct_get_integerarrayparameters_wdims_sf’: pycbf_wrap.c:4978:18: note: length computed here 4978 | *bolen = strlen(byteorder); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:519, from /usr/include/python3.9/Python.h:30, from pycbf_wrap.c:149: In function ‘strncpy’, inlined from ‘cbf_handle_struct_get_realarrayparameters_wdims_sf’ at pycbf_wrap.c:4366:9, inlined from ‘_wrap_cbf_handle_struct_get_realarrayparameters_wdims_sf’ at pycbf_wrap.c:12615:5: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound depends on the length of the source argument [-Wstringop-overflow=] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c: In function ‘_wrap_cbf_handle_struct_get_realarrayparameters_wdims_sf’: pycbf_wrap.c:4364:18: note: length computed here 4364 | *bolen = strlen(byteorder); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:519, from /usr/include/python3.9/Python.h:30, from pycbf_wrap.c:149: In function ‘strncpy’, inlined from ‘SWIG_Python_FixMethods’ at pycbf_wrap.c:29493:15, inlined from ‘PyInit__pycbf’ at pycbf_wrap.c:29593:3: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ output truncated before terminating nul copying 10 bytes from a string of the same length [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/../src/cbf_simple.o build/temp.linux-x86_64-3.9/pycbf_wrap.o -L../solib/ -L../lib/ -lcbf -o /<>/cbflib-0.9.6+dfsg1/.pybuild/cpython3_3.9_pycbf/build/_pycbf.cpython-39-x86_64-linux-gnu.so I: pybuild base:232: /usr/bin/python3-dbg setup.py build running build running build_py copying pycbf.py -> /<>/cbflib-0.9.6+dfsg1/.pybuild/cpython3_3.9_dbg_pycbf/build running build_ext building '_pycbf' extension creating build/temp.linux-x86_64-3.9-pydebug x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../include -I/include -I/usr/include/python3.9d -c ../src/cbf_simple.c -o build/temp.linux-x86_64-3.9-pydebug/../src/cbf_simple.o -I/usr/include/hdf5/serial ../src/cbf_simple.c: In function ‘cbf_set_reference_beam_center’: ../src/cbf_simple.c:8587:44: warning: variable ‘ncenter2’ set but not used [-Wunused-but-set-variable] 8587 | double nindex1, nindex2, ncenter1, ncenter2; | ^~~~~~~~ ../src/cbf_simple.c:8587:34: warning: variable ‘ncenter1’ set but not used [-Wunused-but-set-variable] 8587 | double nindex1, nindex2, ncenter1, ncenter2; | ^~~~~~~~ x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../include -I/include -I/usr/include/python3.9d -c pycbf_wrap.c -o build/temp.linux-x86_64-3.9-pydebug/pycbf_wrap.o -I/usr/include/hdf5/serial pycbf_wrap.c: In function ‘cbf_handle_struct_set_image’: pycbf_wrap.c:4074:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 4074 | void *array; | ^~~~~ pycbf_wrap.c:4072:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 4072 | size_t els; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_realarray_wdims’: pycbf_wrap.c:4289:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 4289 | void *array; | ^~~~~ pycbf_wrap.c:4288:21: warning: variable ‘ele’ set but not used [-Wunused-but-set-variable] 4288 | size_t els, ele; | ^~~ pycbf_wrap.c:4288:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 4288 | size_t els, ele; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_3d_image_fs’: pycbf_wrap.c:4383:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 4383 | void *array; | ^~~~~ pycbf_wrap.c:4381:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 4381 | size_t els; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_real_3d_image_sf’: pycbf_wrap.c:4418:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 4418 | void *array; | ^~~~~ pycbf_wrap.c:4416:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 4416 | size_t els; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_image_fs’: pycbf_wrap.c:4460:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 4460 | void *array; | ^~~~~ pycbf_wrap.c:4458:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 4458 | size_t els; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_real_3d_image’: pycbf_wrap.c:4611:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 4611 | void *array; | ^~~~~ pycbf_wrap.c:4609:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 4609 | size_t els; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_integerarray_wdims_sf’: pycbf_wrap.c:4634:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 4634 | void *array; | ^~~~~ pycbf_wrap.c:4633:21: warning: variable ‘ele’ set but not used [-Wunused-but-set-variable] 4633 | size_t els, ele; | ^~~ pycbf_wrap.c:4633:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 4633 | size_t els, ele; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_3d_image’: pycbf_wrap.c:4782:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 4782 | void *array; | ^~~~~ pycbf_wrap.c:4780:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 4780 | size_t els; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_integerarray_wdims’: pycbf_wrap.c:4832:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 4832 | void *array; | ^~~~~ pycbf_wrap.c:4831:21: warning: variable ‘ele’ set but not used [-Wunused-but-set-variable] 4831 | size_t els, ele; | ^~~ pycbf_wrap.c:4831:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 4831 | size_t els, ele; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_real_image_fs’: pycbf_wrap.c:4908:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 4908 | void *array; | ^~~~~ pycbf_wrap.c:4906:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 4906 | size_t els; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_real_image_sf’: pycbf_wrap.c:5004:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 5004 | void *array; | ^~~~~ pycbf_wrap.c:5002:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 5002 | size_t els; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_realarray_wdims_sf’: pycbf_wrap.c:5060:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 5060 | void *array; | ^~~~~ pycbf_wrap.c:5059:21: warning: variable ‘ele’ set but not used [-Wunused-but-set-variable] 5059 | size_t els, ele; | ^~~ pycbf_wrap.c:5059:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 5059 | size_t els, ele; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_real_image’: pycbf_wrap.c:5091:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 5091 | void *array; | ^~~~~ pycbf_wrap.c:5089:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 5089 | size_t els; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_3d_image_sf’: pycbf_wrap.c:5147:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 5147 | void *array; | ^~~~~ pycbf_wrap.c:5145:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 5145 | size_t els; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_integerarray’: pycbf_wrap.c:5223:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 5223 | void *array; | ^~~~~ pycbf_wrap.c:5222:21: warning: variable ‘ele’ set but not used [-Wunused-but-set-variable] 5222 | size_t els, ele; | ^~~ pycbf_wrap.c:5222:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 5222 | size_t els, ele; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_realarray’: pycbf_wrap.c:5295:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 5295 | void *array; | ^~~~~ pycbf_wrap.c:5294:21: warning: variable ‘ele’ set but not used [-Wunused-but-set-variable] 5294 | size_t els, ele; | ^~~ pycbf_wrap.c:5294:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 5294 | size_t els, ele; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_real_3d_image_fs’: pycbf_wrap.c:5380:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 5380 | void *array; | ^~~~~ pycbf_wrap.c:5378:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 5378 | size_t els; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_realarray_wdims_fs’: pycbf_wrap.c:5422:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 5422 | void *array; | ^~~~~ pycbf_wrap.c:5421:21: warning: variable ‘ele’ set but not used [-Wunused-but-set-variable] 5421 | size_t els, ele; | ^~~ pycbf_wrap.c:5421:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 5421 | size_t els, ele; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_integerarray_wdims_fs’: pycbf_wrap.c:5447:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 5447 | void *array; | ^~~~~ pycbf_wrap.c:5446:21: warning: variable ‘ele’ set but not used [-Wunused-but-set-variable] 5446 | size_t els, ele; | ^~~ pycbf_wrap.c:5446:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 5446 | size_t els, ele; | ^~~ pycbf_wrap.c: In function ‘cbf_handle_struct_set_image_sf’: pycbf_wrap.c:5468:15: warning: variable ‘array’ set but not used [-Wunused-but-set-variable] 5468 | void *array; | ^~~~~ pycbf_wrap.c:5466:16: warning: variable ‘els’ set but not used [-Wunused-but-set-variable] 5466 | size_t els; | ^~~ At top level: pycbf_wrap.c:3469:16: warning: ‘convert_iarray’ defined but not used [-Wunused-function] 3469 | static int convert_iarray(PyObject *input, int *ptr, int size) { | ^~~~~~~~~~~~~~ pycbf_wrap.c:3445:17: warning: ‘convert_larray’ defined but not used [-Wunused-function] 3445 | static long convert_larray(PyObject *input, long *ptr, int size) { | ^~~~~~~~~~~~~~ pycbf_wrap.c: In function ‘get_error_message’: pycbf_wrap.c:3510:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3510 | sprintf(error_message,"%s %s",error_message,"CBF_FORMAT "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9d/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3512:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3512 | sprintf(error_message,"%s %s",error_message,"CBF_ALLOC "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9d/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3514:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3514 | sprintf(error_message,"%s %s",error_message,"CBF_ARGUMENT "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9d/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3516:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3516 | sprintf(error_message,"%s %s",error_message,"CBF_ASCII "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9d/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3518:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3518 | sprintf(error_message,"%s %s",error_message,"CBF_BINARY "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9d/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3520:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3520 | sprintf(error_message,"%s %s",error_message,"CBF_BITCOUNT "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9d/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3522:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3522 | sprintf(error_message,"%s %s",error_message,"CBF_ENDOFDATA "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9d/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3524:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3524 | sprintf(error_message,"%s %s",error_message,"CBF_FILECLOSE "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9d/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3526:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3526 | sprintf(error_message,"%s %s",error_message,"CBF_FILEOPEN "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9d/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3528:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3528 | sprintf(error_message,"%s %s",error_message,"CBF_FILEREAD "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9d/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3530:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3530 | sprintf(error_message,"%s %s",error_message,"CBF_FILESEEK "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9d/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3532:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3532 | sprintf(error_message,"%s %s",error_message,"CBF_FILETELL "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9d/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3534:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3534 | sprintf(error_message,"%s %s",error_message,"CBF_FILEWRITE "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9d/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3536:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3536 | sprintf(error_message,"%s %s",error_message,"CBF_IDENTICAL "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9d/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3538:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3538 | sprintf(error_message,"%s %s",error_message,"CBF_NOTFOUND "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9d/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3540:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3540 | sprintf(error_message,"%s %s",error_message,"CBF_OVERFLOW "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9d/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3542:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3542 | sprintf(error_message,"%s %s",error_message,"CBF_UNDEFINED "); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9d/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3544:31: warning: ‘%s’ directive writing 18 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3544 | sprintf(error_message,"%s %s",error_message,"CBF_NOTIMPLEMENTED"); | ^~ ~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9d/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 20 and 1043 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c:3546:31: warning: ‘%s’ directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 3546 | sprintf(error_message,"%s %s",error_message,"CBF_NOCOMPRESSION"); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /usr/include/python3.9d/Python.h:25, from pycbf_wrap.c:149: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__builtin___sprintf_chk’ output between 19 and 1042 bytes into a destination of size 1024 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:519, from /usr/include/python3.9d/Python.h:30, from pycbf_wrap.c:149: In function ‘strncpy’, inlined from ‘cbf_handle_struct_get_integerarrayparameters_wdims_sf’ at pycbf_wrap.c:4980:9, inlined from ‘_wrap_cbf_handle_struct_get_integerarrayparameters_wdims_sf’ at pycbf_wrap.c:16981:5: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound depends on the length of the source argument [-Wstringop-overflow=] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c: In function ‘_wrap_cbf_handle_struct_get_integerarrayparameters_wdims_sf’: pycbf_wrap.c:4978:18: note: length computed here 4978 | *bolen = strlen(byteorder); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:519, from /usr/include/python3.9d/Python.h:30, from pycbf_wrap.c:149: In function ‘strncpy’, inlined from ‘cbf_handle_struct_get_realarrayparameters_wdims_sf’ at pycbf_wrap.c:4366:9, inlined from ‘_wrap_cbf_handle_struct_get_realarrayparameters_wdims_sf’ at pycbf_wrap.c:12615:5: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound depends on the length of the source argument [-Wstringop-overflow=] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pycbf_wrap.c: In function ‘_wrap_cbf_handle_struct_get_realarrayparameters_wdims_sf’: pycbf_wrap.c:4364:18: note: length computed here 4364 | *bolen = strlen(byteorder); | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:519, from /usr/include/python3.9d/Python.h:30, from pycbf_wrap.c:149: In function ‘strncpy’, inlined from ‘SWIG_Python_FixMethods’ at pycbf_wrap.c:29493:15, inlined from ‘PyInit__pycbf’ at pycbf_wrap.c:29593:3: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ output truncated before terminating nul copying 10 bytes from a string of the same length [-Wstringop-truncation] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9-pydebug/../src/cbf_simple.o build/temp.linux-x86_64-3.9-pydebug/pycbf_wrap.o -L../solib/ -L../lib/ -lcbf -o /<>/cbflib-0.9.6+dfsg1/.pybuild/cpython3_3.9_dbg_pycbf/build/_pycbf.cpython-39d-x86_64-linux-gnu.so make[1]: Leaving directory '/<>/cbflib-0.9.6+dfsg1' create-stamp debian/debhelper-build-stamp dh_testroot -O--no-parallel dh_prep -O--no-parallel debian/rules override_dh_auto_install make[1]: Entering directory '/<>/cbflib-0.9.6+dfsg1' # install the C/C++ library dh_auto_install make -j1 install DESTDIR=/<>/cbflib-0.9.6\+dfsg1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/<>/cbflib-0.9.6+dfsg1' mkdir -p /<>/cbflib-0.9.6+dfsg1/bin g++ -g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/<>/cbflib-0.9.6+dfsg1/include -I/<>/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \ /<>/cbflib-0.9.6+dfsg1/examples/cif2c.c -L/<>/cbflib-0.9.6+dfsg1/lib \ -lcbf -lm -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -o /<>/cbflib-0.9.6+dfsg1/bin/cif2c mkdir -p /<>/cbflib-0.9.6+dfsg1/bin gcc -g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/<>/cbflib-0.9.6+dfsg1/include -I/<>/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \ /<>/cbflib-0.9.6+dfsg1/examples/cif2cbf.c -L/<>/cbflib-0.9.6+dfsg1/lib \ -lcbf -lm -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -o /<>/cbflib-0.9.6+dfsg1/bin/cif2cbf In file included from /usr/include/string.h:519, from /<>/cbflib-0.9.6+dfsg1/include/cbf_hdf5.h:265, from /<>/cbflib-0.9.6+dfsg1/examples/cif2cbf.c:465: In function ‘strncpy’, inlined from ‘main’ at /<>/cbflib-0.9.6+dfsg1/examples/cif2cbf.c:2015:25: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound depends on the length of the source argument [-Wstringop-overflow=] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/cbflib-0.9.6+dfsg1/examples/cif2cbf.c: In function ‘main’: /<>/cbflib-0.9.6+dfsg1/examples/cif2cbf.c:2012:28: note: length computed here 2012 | dbsz = strlen(datablock_name+idb); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ mkdir -p /<>/cbflib-0.9.6+dfsg1/bin g++ -g -O2 -fdebug-prefix-map=/<>/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/<>/cbflib-0.9.6+dfsg1/include -I/<>/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \ /<>/cbflib-0.9.6+dfsg1/examples/testcell.C -L/<>/cbflib-0.9.6+dfsg1/lib \ -lcbf -lm -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -o /<>/cbflib-0.9.6+dfsg1/bin/testcell mkdir -p /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr mkdir -p /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/x86_64-linux-gnu mkdir -p /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin mkdir -p /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/include mkdir -p /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/include/cbflib # # libcbf # chmod 755 /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/x86_64-linux-gnu/libcbf.a chmod: cannot access '/<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/x86_64-linux-gnu/libcbf.a': No such file or directory make[2]: [Makefile:1101: baseinstall] Error 1 (ignored) cp /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/x86_64-linux-gnu/libcbf.a /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/x86_64-linux-gnu/libcbf_old.a cp: cannot stat '/<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/x86_64-linux-gnu/libcbf.a': No such file or directory make[2]: [Makefile:1102: baseinstall] Error 1 (ignored) cp /<>/cbflib-0.9.6+dfsg1/lib/libcbf.a /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/x86_64-linux-gnu/libcbf.a #-chmod 755 /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/x86_64-linux-gnu/libcbf.so #-cp /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/x86_64-linux-gnu/libcbf.so /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/x86_64-linux-gnu/libcbf_old.so cp /<>/cbflib-0.9.6+dfsg1/solib/libcbf.so /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/x86_64-linux-gnu/libcbf.so.1.0.0 ln -s -r -f /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/x86_64-linux-gnu/libcbf.so.1.0.0 /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/x86_64-linux-gnu/libcbf.so.1 ln -s -r -f /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/x86_64-linux-gnu/libcbf.so.1.0.0 /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/x86_64-linux-gnu/libcbf.so #ln -s -f /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/x86_64-linux-gnu/libcbf.so /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/x86_64-linux-gnu/lib_cbf.so chmod 644 /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/x86_64-linux-gnu/libcbf.a chmod 755 /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/x86_64-linux-gnu/libcbf.so # # includes # chmod -R 755 /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/include/cbflib chmod -R 755 /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/include/cbflib rm -rf /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/include/cbflib_old cp -r /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/include/cbflib /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/include/cbflib_old rm -rf /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/include/cbflib cp -r /<>/cbflib-0.9.6+dfsg1/include /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/include/cbflib chmod 644 /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/include/cbflib/*.h # # libfcb # # # libimg # # # programs # cp /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/adscimg2cbf /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/adscimg2cbf_old cp: cannot stat '/<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/adscimg2cbf': No such file or directory make[2]: [Makefile:1131: baseinstall] Error 1 (ignored) cp /<>/cbflib-0.9.6+dfsg1/bin/adscimg2cbf /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/adscimg2cbf cp /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cbf2adscimg /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cbf2adscimg_old cp: cannot stat '/<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cbf2adscimg': No such file or directory make[2]: [Makefile:1133: baseinstall] Error 1 (ignored) cp /<>/cbflib-0.9.6+dfsg1/bin/cbf2adscimg /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cbf2adscimg cp /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cbf_standardize_numbers \ /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cbf_standardize_numbers_old cp: cannot stat '/<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cbf_standardize_numbers': No such file or directory make[2]: [Makefile:1135: baseinstall] Error 1 (ignored) cp /<>/cbflib-0.9.6+dfsg1/bin/cbf_standardize_numbers /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cbf_standardize_numbers cp /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/convert_image /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/convert_image_old cp: cannot stat '/<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/convert_image': No such file or directory make[2]: [Makefile:1137: baseinstall] Error 1 (ignored) cp /<>/cbflib-0.9.6+dfsg1/bin/convert_image /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/convert_image cp /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/convert_minicbf /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/convert_minicbf_old cp: cannot stat '/<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/convert_minicbf': No such file or directory make[2]: [Makefile:1139: baseinstall] Error 1 (ignored) cp /<>/cbflib-0.9.6+dfsg1/bin/convert_minicbf /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/convert_minicbf cp /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/makecbf /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/makecbf_old cp: cannot stat '/<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/makecbf': No such file or directory make[2]: [Makefile:1141: baseinstall] Error 1 (ignored) cp /<>/cbflib-0.9.6+dfsg1/bin/makecbf /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/makecbf cp /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/img2cif /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/img2cif_old cp: cannot stat '/<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/img2cif': No such file or directory make[2]: [Makefile:1143: baseinstall] Error 1 (ignored) cp /<>/cbflib-0.9.6+dfsg1/bin/img2cif /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/img2cif cp /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cif2cbf /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cif2cbf_old cp: cannot stat '/<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cif2cbf': No such file or directory make[2]: [Makefile:1145: baseinstall] Error 1 (ignored) cp /<>/cbflib-0.9.6+dfsg1/bin/cif2cbf /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cif2cbf cp /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/minicbf2nexus /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/minicbf2nexus_old cp: cannot stat '/<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/minicbf2nexus': No such file or directory make[2]: [Makefile:1147: baseinstall] Error 1 (ignored) cp /<>/cbflib-0.9.6+dfsg1/bin/minicbf2nexus /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/minicbf2nexus cp /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cbf2nexus /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cbf2nexus_old cp: cannot stat '/<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cbf2nexus': No such file or directory make[2]: [Makefile:1149: baseinstall] Error 1 (ignored) cp /<>/cbflib-0.9.6+dfsg1/bin/cbf2nexus /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cbf2nexus cp /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/nexus2cbf /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/nexus2cbf_old cp: cannot stat '/<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/nexus2cbf': No such file or directory make[2]: [Makefile:1151: baseinstall] Error 1 (ignored) cp /<>/cbflib-0.9.6+dfsg1/bin/nexus2cbf /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/nexus2cbf cp /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/roi_peaksearch /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/roi_peaksearch_old cp: cannot stat '/<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/roi_peaksearch': No such file or directory make[2]: [Makefile:1153: baseinstall] Error 1 (ignored) cp /<>/cbflib-0.9.6+dfsg1/bin/roi_peaksearch /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/roi_peaksearch cp /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/sequence_match /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/sequence_match_old cp: cannot stat '/<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/sequence_match': No such file or directory make[2]: [Makefile:1155: baseinstall] Error 1 (ignored) cp /<>/cbflib-0.9.6+dfsg1/bin/sequence_match /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/sequence_match cp /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testalloc /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testalloc_old cp: cannot stat '/<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testalloc': No such file or directory make[2]: [Makefile:1157: baseinstall] Error 1 (ignored) cp /<>/cbflib-0.9.6+dfsg1/bin/testalloc /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testalloc cp /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/arvai_test /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/arvai_test_old cp: cannot stat '/<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/arvai_test': No such file or directory make[2]: [Makefile:1159: baseinstall] Error 1 (ignored) cp /<>/cbflib-0.9.6+dfsg1/bin/arvai_test /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/arvai_test cp /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cif2c /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cif2c_old cp: cannot stat '/<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cif2c': No such file or directory make[2]: [Makefile:1161: baseinstall] Error 1 (ignored) cp /<>/cbflib-0.9.6+dfsg1/bin/cif2c /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cif2c cp /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testreals /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testreals_old cp: cannot stat '/<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testreals': No such file or directory make[2]: [Makefile:1163: baseinstall] Error 1 (ignored) cp /<>/cbflib-0.9.6+dfsg1/bin/testreals /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testreals cp /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testflat /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testflat_old cp: cannot stat '/<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testflat': No such file or directory make[2]: [Makefile:1165: baseinstall] Error 1 (ignored) cp /<>/cbflib-0.9.6+dfsg1/bin/testflat /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testflat cp /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testflatpacked /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testflatpacked_old cp: cannot stat '/<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testflatpacked': No such file or directory make[2]: [Makefile:1167: baseinstall] Error 1 (ignored) cp /<>/cbflib-0.9.6+dfsg1/bin/testflatpacked /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testflatpacked #-cp /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/tiff2cbf /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/tiff2cbf_old #cp /<>/cbflib-0.9.6+dfsg1/bin/tiff2cbf /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/tiff2cbf cp /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/test_cbf_airy_disk /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/test_cbf_airy_disk_old cp: cannot stat '/<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/test_cbf_airy_disk': No such file or directory make[2]: [Makefile:1171: baseinstall] Error 1 (ignored) cp /<>/cbflib-0.9.6+dfsg1/bin/test_cbf_airy_disk /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/test_cbf_airy_disk cp /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/test_cbf_airy_disk /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/test_cbf_airy_disk_old cp /<>/cbflib-0.9.6+dfsg1/bin/test_cbf_airy_disk /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/test_cbf_airy_disk cp /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testhdf5 /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testhdf5_old cp: cannot stat '/<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testhdf5': No such file or directory make[2]: [Makefile:1175: baseinstall] Error 1 (ignored) cp /<>/cbflib-0.9.6+dfsg1/bin/testhdf5 /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testhdf5 cp /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/batch_convert_minicbf.sh /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/batch_convert_minicbf_old.sh cp: cannot stat '/<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/batch_convert_minicbf.sh': No such file or directory make[2]: [Makefile:1177: baseinstall] Error 1 (ignored) cp /<>/cbflib-0.9.6+dfsg1/examples/batch_convert_minicbf.sh /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/batch_convert_minicbf.sh chmod 755 /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/arvai_test chmod 755 /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cbf2nexus chmod 755 /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cbf_standardize_numbers chmod 755 /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cif2c chmod 755 /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cif2cbf chmod 755 /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/convert_image chmod 755 /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/convert_minicbf chmod 755 /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/img2cif chmod 755 /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/makecbf chmod 755 /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/minicbf2nexus chmod 755 /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/nexus2cbf chmod 755 /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/roi_peaksearch chmod 755 /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/sequence_match chmod 755 /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testalloc chmod 755 /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testflat chmod 755 /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testflatpacked chmod 755 /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testhdf5 chmod 755 /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testreals chmod 755 /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/test_cbf_airy_disk chmod 755 /<>/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/batch_convert_minicbf.sh make[2]: Leaving directory '/<>/cbflib-0.9.6+dfsg1' # install the python extension /usr/bin/make 'C++:=$(CXX)' /<>/cbflib-0.9.6+dfsg1/pycbf/setup.py make[2]: Entering directory '/<>/cbflib-0.9.6+dfsg1' make[2]: '/<>/cbflib-0.9.6+dfsg1/pycbf/setup.py' is up to date. make[2]: Leaving directory '/<>/cbflib-0.9.6+dfsg1' dh_auto_install --buildsystem=pybuild --sourcedirectory=pycbf I: pybuild base:232: /usr/bin/python3 setup.py install --root /<>/cbflib-0.9.6+dfsg1/debian/python3-pycbf running install running build running build_py running build_ext running install_lib creating /<>/cbflib-0.9.6+dfsg1/debian/python3-pycbf creating /<>/cbflib-0.9.6+dfsg1/debian/python3-pycbf/usr creating /<>/cbflib-0.9.6+dfsg1/debian/python3-pycbf/usr/lib creating /<>/cbflib-0.9.6+dfsg1/debian/python3-pycbf/usr/lib/python3.9 creating /<>/cbflib-0.9.6+dfsg1/debian/python3-pycbf/usr/lib/python3.9/dist-packages copying /<>/cbflib-0.9.6+dfsg1/.pybuild/cpython3_3.9_pycbf/build/_pycbf.cpython-39-x86_64-linux-gnu.so -> /<>/cbflib-0.9.6+dfsg1/debian/python3-pycbf/usr/lib/python3.9/dist-packages copying /<>/cbflib-0.9.6+dfsg1/.pybuild/cpython3_3.9_pycbf/build/pycbf.py -> /<>/cbflib-0.9.6+dfsg1/debian/python3-pycbf/usr/lib/python3.9/dist-packages byte-compiling /<>/cbflib-0.9.6+dfsg1/debian/python3-pycbf/usr/lib/python3.9/dist-packages/pycbf.py to pycbf.cpython-39.pyc running install_egg_info Writing /<>/cbflib-0.9.6+dfsg1/debian/python3-pycbf/usr/lib/python3.9/dist-packages/_pycbf-0.0.0.egg-info I: pybuild base:232: /usr/bin/python3-dbg setup.py install --root /<>/cbflib-0.9.6+dfsg1/debian/python3-pycbf-dbg running install running build running build_py running build_ext running install_lib creating /<>/cbflib-0.9.6+dfsg1/debian/python3-pycbf-dbg creating /<>/cbflib-0.9.6+dfsg1/debian/python3-pycbf-dbg/usr creating /<>/cbflib-0.9.6+dfsg1/debian/python3-pycbf-dbg/usr/lib creating /<>/cbflib-0.9.6+dfsg1/debian/python3-pycbf-dbg/usr/lib/python3.9 creating /<>/cbflib-0.9.6+dfsg1/debian/python3-pycbf-dbg/usr/lib/python3.9/dist-packages copying /<>/cbflib-0.9.6+dfsg1/.pybuild/cpython3_3.9_dbg_pycbf/build/_pycbf.cpython-39d-x86_64-linux-gnu.so -> /<>/cbflib-0.9.6+dfsg1/debian/python3-pycbf-dbg/usr/lib/python3.9/dist-packages copying /<>/cbflib-0.9.6+dfsg1/.pybuild/cpython3_3.9_dbg_pycbf/build/pycbf.py -> /<>/cbflib-0.9.6+dfsg1/debian/python3-pycbf-dbg/usr/lib/python3.9/dist-packages byte-compiling /<>/cbflib-0.9.6+dfsg1/debian/python3-pycbf-dbg/usr/lib/python3.9/dist-packages/pycbf.py to pycbf.cpython-39.pyc running install_egg_info Writing /<>/cbflib-0.9.6+dfsg1/debian/python3-pycbf-dbg/usr/lib/python3.9/dist-packages/_pycbf-0.0.0.egg-info make[1]: Leaving directory '/<>/cbflib-0.9.6+dfsg1' debian/rules override_dh_install make[1]: Entering directory '/<>/cbflib-0.9.6+dfsg1' # cbflib-bin dh_install -p cbflib-bin usr/bin/cbf2nexus dh_install -p cbflib-bin usr/bin/cif2cbf dh_install -p cbflib-bin usr/bin/convert_image dh_install -p cbflib-bin usr/bin/img2cif dh_install -p cbflib-bin usr/bin/makecbf # libcbf-dev dh_install -p libcbf-dev usr/include/cbflib/* dh_install -p libcbf-dev usr/lib/*/lib*.a dh_install -p libcbf-dev usr/lib/*/lib*.so # libcbf1 dh_install -p libcbf1 usr/lib/*/libcbf.so.* # Exclude duplicates (lintian check duplicate-files) dh_install -Xcif_img_1.3.2_22Jun05.html -Xcif_img_1.3.1.html make[1]: Leaving directory '/<>/cbflib-0.9.6+dfsg1' debian/rules override_dh_installdocs make[1]: Entering directory '/<>/cbflib-0.9.6+dfsg1' # cbflib-doc dh_install -p cbflib-doc doc/*.html usr/share/doc/cbflib-doc/html dh_installdocs -p cbflib-doc html_graphics dh_installdocs: warning: Cannot auto-detect main package for cbflib-doc. If the default is wrong, please use --doc-main-package # libcbf-dev dh_installdocs -p libcbf-dev README dh_installdocs make[1]: Leaving directory '/<>/cbflib-0.9.6+dfsg1' dh_installchangelogs -O--no-parallel debian/rules override_dh_installman make[1]: Entering directory '/<>/cbflib-0.9.6+dfsg1' dh_installman -p cbflib-bin debian/manpages/* make[1]: Leaving directory '/<>/cbflib-0.9.6+dfsg1' dh_python3 -O--no-parallel dh_installinit -O--no-parallel dh_installsystemduser -O--no-parallel dh_perl -O--no-parallel dh_link -O--no-parallel dh_strip_nondeterminism -O--no-parallel dh_compress -O--no-parallel dh_fixperms -O--no-parallel dh_missing -O--no-parallel dh_missing: warning: usr/bin/adscimg2cbf exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/arvai_test exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/batch_convert_minicbf.sh exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/cbf2adscimg exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/cbf_standardize_numbers exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/cif2c exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/convert_minicbf exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/minicbf2nexus exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/nexus2cbf exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/roi_peaksearch exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/sequence_match exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/test_cbf_airy_disk exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/test_cbf_airy_disk_old exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/testalloc exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/testflat exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/testflatpacked exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/testhdf5 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/testreals exists in debian/tmp but is not installed to anywhere The following debhelper tools have reported what they installed (with files per package) * dh_install: cbflib-bin (5), cbflib-doc (230), libcbf-dev (37), libcbf1 (2), python3-pycbf (0), python3-pycbf-dbg (0) * dh_installdocs: cbflib-bin (0), cbflib-doc (1), libcbf-dev (1), libcbf1 (0), python3-pycbf (0), python3-pycbf-dbg (0) * dh_installman: cbflib-bin (4), cbflib-doc (0), libcbf-dev (0), libcbf1 (0), python3-pycbf (0), python3-pycbf-dbg (0) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built If the omission is intentional or no other helper can take care of this consider adding the paths to debian/not-installed. dh_dwz -O--no-parallel dh_strip -O--no-parallel dh_makeshlibs -O--no-parallel dh_shlibdeps -O--no-parallel dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python3-pycbf-dbg/usr/lib/python3/dist-packages/_pycbf.cpython-39d-x86_64-linux-gnu.so was not linked against libpthread.so.0 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python3-pycbf/usr/lib/python3/dist-packages/_pycbf.cpython-39-x86_64-linux-gnu.so was not linked against libpthread.so.0 (it uses none of the library's symbols) dh_installdeb -O--no-parallel dh_gencontrol -O--no-parallel dpkg-gencontrol: warning: package python3-pycbf-dbg: substitution variable ${python3:Provides} unused, but is defined dpkg-gencontrol: warning: package python3-pycbf-dbg: substitution variable ${python3:Versions} unused, but is defined dpkg-gencontrol: warning: package python3-pycbf: substitution variable ${python3:Provides} unused, but is defined dpkg-gencontrol: warning: package python3-pycbf: substitution variable ${python3:Versions} unused, but is defined dpkg-gencontrol: warning: package python3-pycbf: substitution variable ${python3:Provides} unused, but is defined dpkg-gencontrol: warning: package python3-pycbf: substitution variable ${python3:Versions} unused, but is defined dh_md5sums -O--no-parallel dh_builddeb -O--no-parallel INFO: pkgstriptranslations version 146 INFO: pkgstriptranslations version 146 INFO: pkgstriptranslations version 146 pkgstriptranslations: processing cbflib-bin (in debian/cbflib-bin); do_strip: , oemstrip: pkgstriptranslations: processing libcbf-dev (in debian/libcbf-dev); do_strip: , oemstrip: pkgstriptranslations: processing python3-pycbf-dbgsym (in debian/.debhelper/python3-pycbf/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/cbflib-bin/DEBIAN/control, package cbflib-bin, directory debian/cbflib-bin INFO: pkgstripfiles: waiting for lock (cbflib-bin) ... pkgstripfiles: processing control file: debian/libcbf-dev/DEBIAN/control, package libcbf-dev, directory debian/libcbf-dev Searching for duplicated docs in dependency libcbf1... symlinking changelog.Debian.gz in libcbf-dev to file in libcbf1 pkgstripfiles: Running PNG optimization (using 4 cpus) for package libcbf-dev ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libcbf-dev' in '../libcbf-dev_0.9.6+dfsg1-2build3_amd64.deb'. INFO: pkgstripfiles: waiting for lock (cbflib-bin) ... INFO: pkgstriptranslations version 146 INFO: pkgstripfiles: waiting for lock (cbflib-bin) ... pkgstriptranslations: processing libcbf1 (in debian/libcbf1); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/libcbf1/DEBIAN/control, package libcbf1, directory debian/libcbf1 pkgstripfiles: Truncating usr/share/doc/libcbf1/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package libcbf1 ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libcbf1' in '../libcbf1_0.9.6+dfsg1-2build3_amd64.deb'. pkgstripfiles: Truncating usr/share/doc/cbflib-bin/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package cbflib-bin ... pkgstripfiles: No PNG files. dpkg-deb: building package 'cbflib-bin' in '../cbflib-bin_0.9.6+dfsg1-2build3_amd64.deb'. INFO: pkgstriptranslations version 146 pkgstriptranslations: processing libcbf1-dbgsym (in debian/.debhelper/libcbf1/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/.debhelper/libcbf1/dbgsym-root/DEBIAN/control, package libcbf1-dbgsym, directory debian/.debhelper/libcbf1/dbgsym-root dpkg-deb: building package 'libcbf1-dbgsym' in 'debian/.debhelper/scratch-space/build-libcbf1/libcbf1-dbgsym_0.9.6+dfsg1-2build3_amd64.deb'. pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " Renaming libcbf1-dbgsym_0.9.6+dfsg1-2build3_amd64.deb to libcbf1-dbgsym_0.9.6+dfsg1-2build3_amd64.ddeb pkgstripfiles: processing control file: debian/.debhelper/python3-pycbf/dbgsym-root/DEBIAN/control, package python3-pycbf-dbgsym, directory debian/.debhelper/python3-pycbf/dbgsym-root dpkg-deb: building package 'python3-pycbf-dbgsym' in 'debian/.debhelper/scratch-space/build-python3-pycbf/python3-pycbf-dbgsym_0.9.6+dfsg1-2build3_amd64.deb'. INFO: pkgstriptranslations version 146 pkgstriptranslations: processing cbflib-bin-dbgsym (in debian/.debhelper/cbflib-bin/dbgsym-root); do_strip: , oemstrip: Renaming python3-pycbf-dbgsym_0.9.6+dfsg1-2build3_amd64.deb to python3-pycbf-dbgsym_0.9.6+dfsg1-2build3_amd64.ddeb pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " INFO: pkgstriptranslations version 146 pkgstripfiles: processing control file: debian/.debhelper/cbflib-bin/dbgsym-root/DEBIAN/control, package cbflib-bin-dbgsym, directory debian/.debhelper/cbflib-bin/dbgsym-root dpkg-deb: building package 'cbflib-bin-dbgsym' in 'debian/.debhelper/scratch-space/build-cbflib-bin/cbflib-bin-dbgsym_0.9.6+dfsg1-2build3_amd64.deb'. pkgstriptranslations: processing python3-pycbf-dbg (in debian/python3-pycbf-dbg); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/python3-pycbf-dbg/DEBIAN/control, package python3-pycbf-dbg, directory debian/python3-pycbf-dbg INFO: pkgstripfiles: waiting for lock (python3-pycbf-dbg) ... Renaming cbflib-bin-dbgsym_0.9.6+dfsg1-2build3_amd64.deb to cbflib-bin-dbgsym_0.9.6+dfsg1-2build3_amd64.ddeb INFO: pkgstripfiles: waiting for lock (python3-pycbf-dbg) ... INFO: pkgstriptranslations version 146 pkgstriptranslations: processing python3-pycbf (in debian/python3-pycbf); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " INFO: pkgstripfiles: waiting for lock (python3-pycbf-dbg) ... pkgstripfiles: processing control file: debian/python3-pycbf/DEBIAN/control, package python3-pycbf, directory debian/python3-pycbf Searching for duplicated docs in dependency libcbf1... symlinking changelog.Debian.gz in python3-pycbf to file in libcbf1 pkgstripfiles: Running PNG optimization (using 4 cpus) for package python3-pycbf ... pkgstripfiles: No PNG files. dpkg-deb: building package 'python3-pycbf' in '../python3-pycbf_0.9.6+dfsg1-2build3_amd64.deb'. Searching for duplicated docs in dependency python3-pycbf... symlinking changelog.Debian.gz in python3-pycbf-dbg to file in libcbf1 Searching for duplicated docs in dependency libcbf1... pkgstripfiles: Running PNG optimization (using 4 cpus) for package python3-pycbf-dbg ... pkgstripfiles: No PNG files. dpkg-deb: building package 'python3-pycbf-dbg' in '../python3-pycbf-dbg_0.9.6+dfsg1-2build3_amd64.deb'. INFO: pkgstriptranslations version 146 pkgstriptranslations: processing cbflib-doc (in debian/cbflib-doc); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/cbflib-doc/DEBIAN/control, package cbflib-doc, directory debian/cbflib-doc .. removing usr/share/doc/cbflib-doc/html/ChangeLog.html pkgstripfiles: Truncating usr/share/doc/cbflib-doc/changelog.Debian.gz to topmost ten records pkgstripfiles: Disabled PNG optimization for -doc package cbflib-doc (to save build time) dpkg-deb: building package 'cbflib-doc' in '../cbflib-doc_0.9.6+dfsg1-2build3_all.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary -mLaunchpad Build Daemon >../cbflib_0.9.6+dfsg1-2build3_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-12-07T20:03:56Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ cbflib_0.9.6+dfsg1-2build3_amd64.changes: ----------------------------------------- Format: 1.8 Date: Mon, 07 Dec 2020 18:39:29 +0100 Source: cbflib Binary: cbflib-bin cbflib-doc libcbf-dev libcbf1 python3-pycbf python3-pycbf-dbg Architecture: amd64 all Version: 0.9.6+dfsg1-2build3 Distribution: hirsute-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Matthias Klose Description: cbflib-bin - utilities to manipulate CBF files cbflib-doc - documentation for CBFlib libcbf-dev - development files for CBFlib libcbf1 - shared library supporting CBFlib python3-pycbf - Python modules for CBFLib -- Python3 python3-pycbf-dbg - Python modules for CBFLib -- Python3 (Debug) Changes: cbflib (0.9.6+dfsg1-2build3) hirsute; urgency=medium . * No-change rebuild to drop python3.8 extensions. 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4:10.2.0-1ubuntu1), cpp-10 (= 10.2.0-20ubuntu1), dash (= 0.5.11+git20200708+dd9ef66+really0.5.10.2-0ubuntu1), debconf (= 1.5.74), debhelper (= 13.3ubuntu1), debianutils (= 4.11.2), dh-autoreconf (= 19), dh-python (= 4.20201102ubuntu1), dh-strip-nondeterminism (= 1.9.0-1), diffutils (= 1:3.7-3ubuntu1), dpkg (= 1.20.5ubuntu3), dpkg-dev (= 1.20.5ubuntu3), dwz (= 0.13+20201015-2), file (= 1:5.39-3), findutils (= 4.7.0-1ubuntu2), g++ (= 4:10.2.0-1ubuntu1), g++-10 (= 10.2.0-20ubuntu1), gcc (= 4:10.2.0-1ubuntu1), gcc-10 (= 10.2.0-20ubuntu1), gcc-10-base (= 10.2.0-20ubuntu1), gettext (= 0.19.8.1-10build1), gettext-base (= 0.19.8.1-10build1), grep (= 3.6-1), groff-base (= 1.22.4-5), gzip (= 1.10-2ubuntu1), hdf5-helpers (= 1.10.6+repack-2), hostname (= 3.23), init-system-helpers (= 1.59), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-8), libaec-dev (= 1.0.4-1), libaec0 (= 1.0.4-1), libarchive-zip-perl (= 1.68-1), libasan6 (= 10.2.0-20ubuntu1), libatomic1 (= 10.2.0-20ubuntu1), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-3ubuntu2), libaudit1 (= 1:2.8.5-3ubuntu2), libbinutils (= 2.35.50.20201207-0ubuntu1), libblkid1 (= 2.36.1-1ubuntu2), libbz2-1.0 (= 1.0.8-4ubuntu2), libc-bin (= 2.32-0ubuntu5), libc-dev-bin (= 2.32-0ubuntu5), libc6 (= 2.32-0ubuntu5), libc6-dev (= 2.32-0ubuntu5), libcap-ng0 (= 0.7.9-2.2build1), libcc1-0 (= 10.2.0-20ubuntu1), libcom-err2 (= 1.45.6-1ubuntu1), libcroco3 (= 0.6.13-1), libcrypt-dev (= 1:4.4.17-1ubuntu1), libcrypt1 (= 1:4.4.17-1ubuntu1), libctf-nobfd0 (= 2.35.50.20201207-0ubuntu1), libctf0 (= 2.35.50.20201207-0ubuntu1), libdb5.3 (= 5.3.28+dfsg1-0.6ubuntu3), libdebconfclient0 (= 0.255ubuntu1), libdebhelper-perl (= 13.3ubuntu1), libdpkg-perl (= 1.20.5ubuntu3), libelf1 (= 0.182-1), libexpat1 (= 2.2.10-1), libexpat1-dev (= 2.2.10-1), libffi8ubuntu1 (= 3.4~20200819gead65ca871-0ubuntu3), libfile-stripnondeterminism-perl (= 1.9.0-1), libgcc-10-dev (= 10.2.0-20ubuntu1), libgcc-s1 (= 10.2.0-20ubuntu1), libgcrypt20 (= 1.8.7-2ubuntu1), libgdbm-compat4 (= 1.18.1-5.1), libgdbm6 (= 1.18.1-5.1), libgfortran5 (= 10.2.0-20ubuntu1), libglib2.0-0 (= 2.66.3-2), libgmp10 (= 2:6.2.0+dfsg-6ubuntu1), libgomp1 (= 10.2.0-20ubuntu1), libgpg-error0 (= 1.38-2), libgssapi-krb5-2 (= 1.17-10ubuntu1), libhdf5-103-1 (= 1.10.6+repack-2), libhdf5-cpp-103-1 (= 1.10.6+repack-2), libhdf5-dev (= 1.10.6+repack-2), libhdf5-fortran-102 (= 1.10.6+repack-2), libhdf5-hl-100 (= 1.10.6+repack-2), libhdf5-hl-cpp-100 (= 1.10.6+repack-2), libhdf5-hl-fortran-100 (= 1.10.6+repack-2), libicu67 (= 67.1-4), libisl23 (= 0.23-1), libitm1 (= 10.2.0-20ubuntu1), libjpeg-dev (= 8c-2ubuntu8), libjpeg-turbo8 (= 2.0.3-0ubuntu2), libjpeg-turbo8-dev (= 2.0.3-0ubuntu2), libjpeg8 (= 8c-2ubuntu8), libjpeg8-dev (= 8c-2ubuntu8), libk5crypto3 (= 1.17-10ubuntu1), libkeyutils1 (= 1.6.1-2ubuntu1), libkrb5-3 (= 1.17-10ubuntu1), libkrb5support0 (= 1.17-10ubuntu1), liblsan0 (= 10.2.0-20ubuntu1), liblz4-1 (= 1.9.3-0ubuntu1), liblzma5 (= 5.2.4-1ubuntu1), libmagic-mgc (= 1:5.39-3), libmagic1 (= 1:5.39-3), libmount1 (= 2.36.1-1ubuntu2), libmpc3 (= 1.2.0-1), libmpfr6 (= 4.1.0-3), libncursesw6 (= 6.2+20201114-1), libnsl-dev (= 1.3.0-0ubuntu3), libnsl2 (= 1.3.0-0ubuntu3), libpam-modules (= 1.3.1-5ubuntu6), libpam-modules-bin (= 1.3.1-5ubuntu6), libpam-runtime (= 1.3.1-5ubuntu6), libpam0g (= 1.3.1-5ubuntu6), libpcre2-8-0 (= 10.34-7), libpcre3 (= 2:8.39-13), libperl5.32 (= 5.32.0-5), libpipeline1 (= 1.5.3-1), libpython3-all-dbg (= 3.9.0-3ubuntu1), libpython3-all-dev (= 3.9.0-3ubuntu1), libpython3-dbg (= 3.9.0-3ubuntu1), libpython3-dev (= 3.9.0-3ubuntu1), libpython3-stdlib (= 3.9.0-3ubuntu1), libpython3.9 (= 3.9.1~rc1-2), libpython3.9-dbg (= 3.9.1~rc1-2), libpython3.9-dev (= 3.9.1~rc1-2), libpython3.9-minimal (= 3.9.1~rc1-2), libpython3.9-stdlib (= 3.9.1~rc1-2), libquadmath0 (= 10.2.0-20ubuntu1), libreadline8 (= 8.1~rc3-1), libseccomp2 (= 2.4.3-1ubuntu5), libselinux1 (= 3.1-2build1), libsigsegv2 (= 2.12-2build1), libsmartcols1 (= 2.36.1-1ubuntu2), libsqlite3-0 (= 3.34.0-1), libssl1.1 (= 1.1.1f-1ubuntu4), libstdc++-10-dev (= 10.2.0-20ubuntu1), libstdc++6 (= 10.2.0-20ubuntu1), libsub-override-perl (= 0.09-2), libsystemd0 (= 246.6-5ubuntu1), libsz2 (= 1.0.4-1), libtinfo6 (= 6.2+20201114-1), libtirpc-common (= 1.2.6-3), libtirpc-dev (= 1.2.6-3), libtirpc3 (= 1.2.6-3), libtool (= 2.4.6-14), libtsan0 (= 10.2.0-20ubuntu1), libubsan1 (= 10.2.0-20ubuntu1), libuchardet0 (= 0.0.7-1), libudev1 (= 246.6-5ubuntu1), libunistring2 (= 0.9.10-4), libuuid1 (= 2.36.1-1ubuntu2), libxml2 (= 2.9.10+dfsg-6.3), libzstd1 (= 1.4.5+dfsg-4), linux-libc-dev (= 5.8.0-32.34+21.04.1), login (= 1:4.8.1-1ubuntu7), lsb-base (= 11.1.0ubuntu2), m4 (= 1.4.18-4), mailcap (= 3.67ubuntu1), make (= 4.3-4ubuntu1), man-db (= 2.9.3-2), mawk (= 1.3.4.20200120-2), media-types (= 1.0.1ubuntu1), mime-support (= 3.66), ncurses-base (= 6.2+20201114-1), ncurses-bin (= 6.2+20201114-1), patch (= 2.7.6-6), perl (= 5.32.0-5), perl-base (= 5.32.0-5), perl-modules-5.32 (= 5.32.0-5), pkg-config (= 0.29.2-1ubuntu1), po-debconf (= 1.0.21), python3 (= 3.9.0-3ubuntu1), python3-all (= 3.9.0-3ubuntu1), python3-all-dbg (= 3.9.0-3ubuntu1), python3-all-dev (= 3.9.0-3ubuntu1), python3-dbg (= 3.9.0-3ubuntu1), python3-dev (= 3.9.0-3ubuntu1), python3-distutils (= 3.9.0-1), python3-lib2to3 (= 3.9.0-1), python3-minimal (= 3.9.0-3ubuntu1), python3.9 (= 3.9.1~rc1-2), python3.9-dbg (= 3.9.1~rc1-2), python3.9-dev (= 3.9.1~rc1-2), python3.9-minimal (= 3.9.1~rc1-2), readline-common (= 8.1~rc3-1), rpcsvc-proto (= 1.4.2-0ubuntu4), sed (= 4.7-1ubuntu1), sensible-utils (= 0.0.13), sysvinit-utils (= 2.96-5ubuntu1), tar (= 1.32+dfsg-1), tzdata (= 2020d-1ubuntu1), util-linux (= 2.36.1-1ubuntu2), xz-utils (= 5.2.4-1ubuntu1), zlib1g (= 1:1.2.11.dfsg-2ubuntu4), zlib1g-dev (= 1:1.2.11.dfsg-2ubuntu4) Environment: DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1607362769" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ cbflib-bin_0.9.6+dfsg1-2build3_amd64.deb ---------------------------------------- new Debian package, version 2.0. size 488704 bytes: control archive=1036 bytes. 679 bytes, 17 lines control 676 bytes, 11 lines md5sums Package: cbflib-bin Source: cbflib Version: 0.9.6+dfsg1-2build3 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Science Maintainers Installed-Size: 2894 Depends: libc6 (>= 2.29), libhdf5-103-1 Section: science Priority: optional Homepage: http://www.bernstein-plus-sons.com/software/CBF/ Description: utilities to manipulate CBF files CBFlib is a library of ANSI-C functions providing a simple mechanism for accessing Crystallographic Binary Files (CBF files) and Image-supporting CIF (imgCIF) files. . 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cbflib Version: 0.9.6+dfsg1-2build3 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Science Maintainers Installed-Size: 2503 Depends: libcbf1 (= 0.9.6+dfsg1-2build3), libhdf5-dev Section: libdevel Priority: optional Multi-Arch: same Homepage: http://www.bernstein-plus-sons.com/software/CBF/ Description: development files for CBFlib CBFLIB is a library of ANSI-C functions providing a simple mechanism for accessing Crystallographic Binary Files (CBF files) and Image-supporting CIF (imgCIF) files. The CBFLIB API is loosely based on the CIFPARSE API for mmCIF files. CBFLIB does not perform any semantic integrity checks and simply provides functions to create, read, modify and write CBF binary data files and imgCIF ASCII data files. . This package contains libraries and header files for program development. drwxr-xr-x root/root 0 2020-12-07 17:39 ./ drwxr-xr-x root/root 0 2020-12-07 17:39 ./usr/ drwxr-xr-x root/root 0 2020-12-07 17:39 ./usr/include/ drwxr-xr-x root/root 0 2020-12-07 17:39 ./usr/include/cbflib/ -rw-r--r-- root/root 72478 2020-12-07 17:39 ./usr/include/cbflib/cbf.h -rw-r--r-- root/root 19076 2020-12-07 17:39 ./usr/include/cbflib/cbf_airy_disk.h -rw-r--r-- root/root 17939 2020-12-07 17:39 ./usr/include/cbflib/cbf_alloc.h -rw-r--r-- root/root 18102 2020-12-07 17:39 ./usr/include/cbflib/cbf_ascii.h -rw-r--r-- root/root 21042 2020-12-07 17:39 ./usr/include/cbflib/cbf_binary.h -rw-r--r-- root/root 20826 2020-12-07 17:39 ./usr/include/cbflib/cbf_byte_offset.h -rw-r--r-- root/root 24266 2020-12-07 17:39 ./usr/include/cbflib/cbf_canonical.h -rw-r--r-- root/root 19954 2020-12-07 17:39 ./usr/include/cbflib/cbf_codes.h -rw-r--r-- root/root 20928 2020-12-07 17:39 ./usr/include/cbflib/cbf_compress.h -rw-r--r-- root/root 18820 2020-12-07 17:39 ./usr/include/cbflib/cbf_context.h -rw-r--r-- root/root 21743 2020-12-07 17:39 ./usr/include/cbflib/cbf_copy.h -rw-r--r-- root/root 23370 2020-12-07 17:39 ./usr/include/cbflib/cbf_file.h -rw-r--r-- root/root 9277 2020-12-07 17:39 ./usr/include/cbflib/cbf_getopt.h -rw-r--r-- root/root 74109 2020-12-07 17:39 ./usr/include/cbflib/cbf_hdf5.h -rw-r--r-- root/root 19495 2020-12-07 17:39 ./usr/include/cbflib/cbf_hdf5_filter.h -rw-r--r-- root/root 17604 2020-12-07 17:39 ./usr/include/cbflib/cbf_lex.h -rw-r--r-- root/root 17718 2020-12-07 17:39 ./usr/include/cbflib/cbf_minicbf_header.h -rw-r--r-- root/root 20856 2020-12-07 17:39 ./usr/include/cbflib/cbf_nibble_offset.h -rw-r--r-- root/root 20598 2020-12-07 17:39 ./usr/include/cbflib/cbf_packed.h -rw-r--r-- root/root 20803 2020-12-07 17:39 ./usr/include/cbflib/cbf_predictor.h -rw-r--r-- root/root 17785 2020-12-07 17:39 ./usr/include/cbflib/cbf_read_binary.h -rw-r--r-- root/root 20072 2020-12-07 17:39 ./usr/include/cbflib/cbf_read_mime.h -rw-r--r-- root/root 78061 2020-12-07 17:39 ./usr/include/cbflib/cbf_simple.h -rw-r--r-- root/root 18154 2020-12-07 17:39 ./usr/include/cbflib/cbf_string.h -rw-r--r-- root/root 2803 2020-12-07 17:39 ./usr/include/cbflib/cbf_stx.h -rw-r--r-- root/root 22471 2020-12-07 17:39 ./usr/include/cbflib/cbf_tree.h -rw-r--r-- root/root 2225 2020-12-07 17:39 ./usr/include/cbflib/cbf_ulp.h -rw-r--r-- root/root 20537 2020-12-07 17:39 ./usr/include/cbflib/cbf_uncompressed.h -rw-r--r-- root/root 18145 2020-12-07 17:39 ./usr/include/cbflib/cbf_write.h -rw-r--r-- root/root 17696 2020-12-07 17:39 ./usr/include/cbflib/cbf_write_binary.h -rw-r--r-- root/root 21535 2020-12-07 17:39 ./usr/include/cbflib/cbf_ws.h -rw-r--r-- root/root 123992 2020-12-07 17:39 ./usr/include/cbflib/cbff.h -rw-r--r-- root/root 1653 2020-12-07 17:39 ./usr/include/cbflib/global.h -rw-r--r-- root/root 4959 2020-12-07 17:39 ./usr/include/cbflib/img.h -rw-r--r-- root/root 1833 2020-12-07 17:39 ./usr/include/cbflib/md5.h drwxr-xr-x root/root 0 2020-12-07 17:39 ./usr/lib/ drwxr-xr-x root/root 0 2020-12-07 17:39 ./usr/lib/x86_64-linux-gnu/ -rw-r--r-- root/root 1635498 2020-12-07 17:39 ./usr/lib/x86_64-linux-gnu/libcbf.a lrwxrwxrwx root/root 0 2020-12-07 17:39 ./usr/lib/x86_64-linux-gnu/libcbf.so -> libcbf.so.1.0.0 drwxr-xr-x root/root 0 2020-12-07 17:39 ./usr/share/ drwxr-xr-x root/root 0 2020-12-07 17:39 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-12-07 17:39 ./usr/share/doc/libcbf-dev/ -rw-r--r-- root/root 6315 2020-04-16 10:29 ./usr/share/doc/libcbf-dev/README.gz lrwxrwxrwx root/root 0 2020-12-07 17:39 ./usr/share/doc/libcbf-dev/changelog.Debian.gz -> ../libcbf1/changelog.Debian.gz -rw-r--r-- root/root 13872 2020-04-20 18:16 ./usr/share/doc/libcbf-dev/copyright libcbf1_0.9.6+dfsg1-2build3_amd64.deb ------------------------------------- new Debian package, version 2.0. size 326036 bytes: control archive=5336 bytes. 682 bytes, 18 lines control 217 bytes, 3 lines md5sums 34 bytes, 1 lines shlibs 38190 bytes, 1044 lines symbols 72 bytes, 2 lines triggers Package: libcbf1 Source: cbflib Version: 0.9.6+dfsg1-2build3 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Science Maintainers Installed-Size: 945 Depends: libc6 (>= 2.29), libhdf5-103-1 Section: libs Priority: optional Multi-Arch: same Homepage: http://www.bernstein-plus-sons.com/software/CBF/ Description: shared library supporting CBFlib CBFlib is a library of ANSI-C functions providing a simple mechanism for accessing Crystallographic Binary Files (CBF files) and Image-supporting CIF (imgCIF) files. . This package contains the shared library. drwxr-xr-x root/root 0 2020-12-07 17:39 ./ drwxr-xr-x root/root 0 2020-12-07 17:39 ./usr/ drwxr-xr-x root/root 0 2020-12-07 17:39 ./usr/lib/ drwxr-xr-x root/root 0 2020-12-07 17:39 ./usr/lib/x86_64-linux-gnu/ lrwxrwxrwx root/root 0 2020-12-07 17:39 ./usr/lib/x86_64-linux-gnu/libcbf.so.1 -> libcbf.so.1.0.0 -rw-r--r-- root/root 899360 2020-12-07 17:39 ./usr/lib/x86_64-linux-gnu/libcbf.so.1.0.0 drwxr-xr-x root/root 0 2020-12-07 17:39 ./usr/share/ drwxr-xr-x root/root 0 2020-12-07 17:39 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-12-07 17:39 ./usr/share/doc/libcbf1/ -rw-r--r-- root/root 2315 2020-12-07 17:39 ./usr/share/doc/libcbf1/changelog.Debian.gz -rw-r--r-- root/root 13872 2020-04-20 18:16 ./usr/share/doc/libcbf1/copyright python3-pycbf-dbg_0.9.6+dfsg1-2build3_amd64.deb ----------------------------------------------- new Debian package, version 2.0. size 130092 bytes: control archive=840 bytes. 787 bytes, 17 lines control 179 bytes, 2 lines md5sums Package: python3-pycbf-dbg Source: cbflib Version: 0.9.6+dfsg1-2build3 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Science Maintainers Installed-Size: 815 Depends: python3-pycbf (= 0.9.6+dfsg1-2build3), python3-dbg (<< 3.10), python3-dbg (>= 3.9~), libc6 (>= 2.14), libcbf1 (>= 0.9.5.18) Section: debug Priority: optional Homepage: http://www.bernstein-plus-sons.com/software/CBF/ Description: Python modules for CBFLib -- Python3 (Debug) CBFlib is a library of ANSI-C functions providing a simple mechanism for accessing Crystallographic Binary Files (CBF files) and Image-supporting CIF (imgCIF) files. . This package contains the Python3 Debug module. drwxr-xr-x root/root 0 2020-12-07 17:39 ./ drwxr-xr-x root/root 0 2020-12-07 17:39 ./usr/ drwxr-xr-x root/root 0 2020-12-07 17:39 ./usr/lib/ drwxr-xr-x root/root 0 2020-12-07 17:39 ./usr/lib/python3/ drwxr-xr-x root/root 0 2020-12-07 17:39 ./usr/lib/python3/dist-packages/ -rw-r--r-- root/root 807600 2020-12-07 17:39 ./usr/lib/python3/dist-packages/_pycbf.cpython-39d-x86_64-linux-gnu.so drwxr-xr-x root/root 0 2020-12-07 17:39 ./usr/share/ drwxr-xr-x root/root 0 2020-12-07 17:39 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-12-07 17:39 ./usr/share/doc/python3-pycbf-dbg/ lrwxrwxrwx root/root 0 2020-12-07 17:39 ./usr/share/doc/python3-pycbf-dbg/changelog.Debian.gz -> ../libcbf1/changelog.Debian.gz -rw-r--r-- root/root 13872 2020-04-20 18:16 ./usr/share/doc/python3-pycbf-dbg/copyright python3-pycbf_0.9.6+dfsg1-2build3_amd64.deb ------------------------------------------- new Debian package, version 2.0. size 142868 bytes: control archive=1200 bytes. 737 bytes, 17 lines control 333 bytes, 4 lines md5sums 251 bytes, 12 lines * postinst #!/bin/sh 400 bytes, 12 lines * prerm #!/bin/sh Package: python3-pycbf Source: cbflib Version: 0.9.6+dfsg1-2build3 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Science Maintainers Installed-Size: 1243 Depends: python3 (<< 3.10), python3 (>= 3.9~), python3:any, libc6 (>= 2.14), libcbf1 (>= 0.9.5.18) Section: python Priority: optional Homepage: http://www.bernstein-plus-sons.com/software/CBF/ Description: Python modules for CBFLib -- Python3 CBFlib is a library of ANSI-C functions providing a simple mechanism for accessing Crystallographic Binary Files (CBF files) and Image-supporting CIF (imgCIF) files. . This package contains the Python3 module. drwxr-xr-x root/root 0 2020-12-07 17:39 ./ drwxr-xr-x root/root 0 2020-12-07 17:39 ./usr/ drwxr-xr-x root/root 0 2020-12-07 17:39 ./usr/lib/ drwxr-xr-x root/root 0 2020-12-07 17:39 ./usr/lib/python3/ drwxr-xr-x root/root 0 2020-12-07 17:39 ./usr/lib/python3/dist-packages/ -rw-r--r-- root/root 180 2020-12-07 17:39 ./usr/lib/python3/dist-packages/_pycbf-0.0.0.egg-info -rw-r--r-- root/root 799536 2020-12-07 17:39 ./usr/lib/python3/dist-packages/_pycbf.cpython-39-x86_64-linux-gnu.so -rw-r--r-- root/root 443246 2020-04-16 10:29 ./usr/lib/python3/dist-packages/pycbf.py drwxr-xr-x root/root 0 2020-12-07 17:39 ./usr/share/ drwxr-xr-x root/root 0 2020-12-07 17:39 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-12-07 17:39 ./usr/share/doc/python3-pycbf/ lrwxrwxrwx root/root 0 2020-12-07 17:39 ./usr/share/doc/python3-pycbf/changelog.Debian.gz -> ../libcbf1/changelog.Debian.gz -rw-r--r-- root/root 13872 2020-04-20 18:16 ./usr/share/doc/python3-pycbf/copyright +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: binary Build-Space: n/a Build-Time: 172 Distribution: hirsute-proposed Host Architecture: amd64 Install-Time: 31 Job: cbflib_0.9.6+dfsg1-2build3.dsc Machine Architecture: amd64 Package: cbflib Package-Time: 206 Source-Version: 0.9.6+dfsg1-2build3 Space: n/a Status: successful Version: 0.9.6+dfsg1-2build3 -------------------------------------------------------------------------------- Finished at 2020-12-07T20:03:56Z Build needed 00:03:26, no disk space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=hirsute --arch=amd64 PACKAGEBUILD-20377363 Scanning for processes to kill in build PACKAGEBUILD-20377363