https://launchpad.net/ubuntu/+source/cctbx/2023.12+ds2+~3.17.0+ds1-4build2/+build/27987401 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos01-s390x-004 5.4.0-173-generic #191-Ubuntu SMP Fri Feb 2 13:54:49 UTC 2024 s390x Buildd toolchain package versions: launchpad-buildd_236~650~ubuntu20.04.1 python3-lpbuildd_236~650~ubuntu20.04.1 sbuild_0.79.0-1ubuntu1 git-build-recipe_0.3.6 git_1:2.25.1-1ubuntu3.11 dpkg-dev_1.19.7ubuntu3.2 python3-debian_0.1.36ubuntu1.1. Syncing the system clock with the buildd NTP service... 1 Apr 03:18:41 ntpdate[1872]: adjust time server 10.211.37.1 offset -0.000099 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=noble --arch=s390x PACKAGEBUILD-27987401 --image-type chroot /home/buildd/filecache-default/c23f799bb684944311373fdcead5a58221fa6ef7 Creating target for build PACKAGEBUILD-27987401 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=noble --arch=s390x PACKAGEBUILD-27987401 Starting target for build PACKAGEBUILD-27987401 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=noble --arch=s390x PACKAGEBUILD-27987401 'deb http://ftpmaster.internal/ubuntu noble main universe' 'deb http://ftpmaster.internal/ubuntu noble-security main universe' 'deb http://ftpmaster.internal/ubuntu noble-updates main universe' 'deb http://ftpmaster.internal/ubuntu noble-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-27987401 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=noble --arch=s390x PACKAGEBUILD-27987401 Updating target for build PACKAGEBUILD-27987401 Get:1 http://ftpmaster.internal/ubuntu noble InRelease [255 kB] Get:2 http://ftpmaster.internal/ubuntu noble-security InRelease [90.7 kB] Get:3 http://ftpmaster.internal/ubuntu noble-updates InRelease [89.7 kB] Get:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] Get:5 http://ftpmaster.internal/ubuntu noble/main s390x Packages [1357 kB] Get:6 http://ftpmaster.internal/ubuntu noble/main Translation-en [512 kB] Get:7 http://ftpmaster.internal/ubuntu noble/universe s390x Packages [14.4 MB] Get:8 http://ftpmaster.internal/ubuntu noble/universe Translation-en [6118 kB] Get:9 http://ftpmaster.internal/ubuntu noble-updates/main s390x Packages [675 kB] Get:10 http://ftpmaster.internal/ubuntu noble-updates/main Translation-en [242 kB] Get:11 http://ftpmaster.internal/ubuntu noble-updates/universe s390x Packages [4414 kB] Get:12 http://ftpmaster.internal/ubuntu noble-updates/universe Translation-en [1693 kB] Get:13 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [524 kB] Get:14 http://ftpmaster.internal/ubuntu noble-proposed/main Translation-en [212 kB] Get:15 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [1914 kB] Get:16 http://ftpmaster.internal/ubuntu noble-proposed/universe Translation-en [893 kB] Fetched 33.5 MB in 6s (5302 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libnsl-dev libperl5.36 libtirpc-dev libunistring2 perl-modules-5.36 Use 'sudo apt autoremove' to remove them. The following packages will be REMOVED: libapt-pkg6.0* libdb5.3* libext2fs2* libgdbm-compat4* libgdbm6* libgnutls30* libhogweed6* libnettle8* libnpth0* libpng16-16* libreadline8* libssl3* libtirpc3* usrmerge* The following NEW packages will be installed: cpp-13-s390x-linux-gnu cpp-s390x-linux-gnu g++-13-s390x-linux-gnu g++-s390x-linux-gnu gcc-13-s390x-linux-gnu gcc-14-base gcc-s390x-linux-gnu libapt-pkg6.0t64 libdb5.3t64 libext2fs2t64 libgdbm-compat4t64 libgdbm6t64 libgnutls30t64 libhogweed6t64 libnettle8t64 libnpth0t64 libperl5.38t64 libpng16-16t64 libreadline8t64 libssl3t64 libtirpc3t64 libunistring5 perl-modules-5.38 The following packages will be upgraded: apt apt-utils base-files base-passwd bash bash-completion binutils binutils-common binutils-s390x-linux-gnu bsdextrautils bsdutils bzip2 ca-certificates coreutils cpp cpp-13 dash debconf debconf-i18n debianutils diffutils dpkg dpkg-dev e2fsprogs fakeroot g++ g++-13 gcc gcc-13 gcc-13-base gpg gpg-agent gpgconf gpgv grep gzip hostname init init-system-helpers krb5-locales libacl1 libapparmor1 libargon2-1 libasan8 libatomic1 libattr1 libaudit-common libaudit1 libbinutils libblkid1 libbz2-1.0 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcom-err2 libcrypt-dev libcrypt1 libcryptsetup12 libctf-nobfd0 libctf0 libdebconfclient0 libdevmapper1.02.1 libdpkg-perl libfakeroot libfdisk1 libffi8 libgcc-13-dev libgcc-s1 libgcrypt20 libgomp1 libgpg-error-l10n libgpg-error0 libgpm2 libgssapi-krb5-2 libidn2-0 libip4tc2 libitm1 libjansson4 libk5crypto3 libkeyutils1 libkmod2 libkrb5-3 libkrb5support0 liblocale-gettext-perl liblzma5 libmd0 libmount1 libncursesw6 libnsl-dev libnsl2 libnss-nisplus libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpcre2-8-0 libproc2-0 libseccomp2 libselinux1 libsemanage-common libsemanage2 libsepol2 libsframe1 libsmartcols1 libsqlite3-0 libss2 libstdc++-13-dev libstdc++6 libsystemd-shared libsystemd0 libtext-charwidth-perl libtext-iconv-perl libtinfo6 libtirpc-common libtirpc-dev libubsan1 libudev1 libuuid1 libxxhash0 libzstd1 linux-libc-dev login logsave lto-disabled-list mawk mount ncurses-base ncurses-bin openssl optipng passwd perl perl-base pinentry-curses procps psmisc readline-common sed sensible-utils systemd systemd-dev systemd-sysv sysvinit-utils tar tzdata ubuntu-keyring util-linux uuid-runtime xz-utils zlib1g 155 upgraded, 23 newly installed, 14 to remove and 0 not upgraded. Need to get 105 MB of archives. After this operation, 76.0 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libnsl-dev s390x 1.3.0-3build3 [73.1 kB] Get:2 http://ftpmaster.internal/ubuntu noble/main s390x libcrypt-dev s390x 1:4.4.36-4 [135 kB] Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libc6-dev s390x 2.39-0ubuntu8 [1629 kB] Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libc-dev-bin s390x 2.39-0ubuntu8 [20.2 kB] Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libtirpc-common all 1.3.4+ds-1.1build1 [8094 B] Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libtirpc-dev s390x 1.3.4+ds-1.1build1 [197 kB] Get:7 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libnss-nisplus s390x 1.3-5build1 [23.8 kB] Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libtirpc3t64 s390x 1.3.4+ds-1.1build1 [85.9 kB] Get:9 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgssapi-krb5-2 s390x 1.20.1-6ubuntu2 [149 kB] Get:10 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libkrb5-3 s390x 1.20.1-6ubuntu2 [360 kB] Get:11 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libk5crypto3 s390x 1.20.1-6ubuntu2 [90.3 kB] Get:12 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libkrb5support0 s390x 1.20.1-6ubuntu2 [34.7 kB] Get:13 http://ftpmaster.internal/ubuntu noble/main s390x libacl1 s390x 2.3.2-1 [18.0 kB] Get:14 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libapparmor1 s390x 4.0.0-beta3-0ubuntu3 [50.8 kB] Get:15 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libaudit-common all 1:3.1.2-2.1build1 [5736 B] Get:16 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcap-ng0 s390x 0.8.4-2build2 [15.8 kB] Get:17 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libaudit1 s390x 1:3.1.2-2.1build1 [48.9 kB] Get:18 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblkid1 s390x 2.39.3-9ubuntu3 [128 kB] Get:19 http://ftpmaster.internal/ubuntu noble/main s390x libcap2 s390x 1:2.66-5ubuntu1 [31.7 kB] Get:20 http://ftpmaster.internal/ubuntu noble/main s390x libcrypt1 s390x 1:4.4.36-4 [102 kB] Get:21 http://ftpmaster.internal/ubuntu noble/main s390x libgpg-error-l10n all 1.47-3build1 [8024 B] Get:22 http://ftpmaster.internal/ubuntu noble/main s390x libgpg-error0 s390x 1.47-3build1 [75.6 kB] Get:23 http://ftpmaster.internal/ubuntu noble/main s390x libgcrypt20 s390x 1.10.3-2 [499 kB] Get:24 http://ftpmaster.internal/ubuntu noble-proposed/main s390x liblzma5 s390x 5.6.1+really5.4.5-1build1 [135 kB] Get:25 http://ftpmaster.internal/ubuntu noble/main s390x libzstd1 s390x 1.5.5+dfsg2-2 [336 kB] Get:26 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libkmod2 s390x 31+20240202-2ubuntu5 [56.3 kB] Get:27 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-8-0 s390x 10.42-4ubuntu1 [243 kB] Get:28 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libselinux1 s390x 3.5-2ubuntu2 [84.8 kB] Get:29 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libmount1 s390x 2.39.3-9ubuntu3 [138 kB] Get:30 http://ftpmaster.internal/ubuntu noble-proposed/main s390x perl-modules-5.38 all 5.38.2-3.2build1 [3110 kB] Get:31 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libdb5.3t64 s390x 5.3.28+dfsg2-6build1 [763 kB] Get:32 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgdbm6t64 s390x 1.23-5.1build1 [36.5 kB] Get:33 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgdbm-compat4t64 s390x 1.23-5.1build1 [6890 B] Get:34 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libperl5.38t64 s390x 5.38.2-3.2build1 [5008 kB] Get:35 http://ftpmaster.internal/ubuntu noble-proposed/main s390x perl s390x 5.38.2-3.2build1 [231 kB] Get:36 http://ftpmaster.internal/ubuntu noble-proposed/main s390x perl-base s390x 5.38.2-3.2build1 [1968 kB] Get:37 http://ftpmaster.internal/ubuntu noble-proposed/main s390x liblocale-gettext-perl s390x 1.07-6ubuntu5 [15.8 kB] Get:38 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libtext-iconv-perl s390x 1.7-8build3 [13.8 kB] Get:39 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libtext-charwidth-perl s390x 0.04-11build3 [9518 B] Get:40 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libc6 s390x 2.39-0ubuntu8 [2847 kB] Get:41 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libc-bin s390x 2.39-0ubuntu8 [654 kB] Get:42 http://ftpmaster.internal/ubuntu noble-proposed/main s390x openssl s390x 3.0.13-0ubuntu3 [1009 kB] Get:43 http://ftpmaster.internal/ubuntu noble/main s390x libsystemd-shared s390x 255.4-1ubuntu5 [2131 kB] Get:44 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcryptsetup12 s390x 2:2.7.0-1ubuntu3 [264 kB] Get:45 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libssl3t64 s390x 3.0.13-0ubuntu3 [1675 kB] Get:46 http://ftpmaster.internal/ubuntu noble-proposed/main s390x systemd-dev all 255.4-1ubuntu6 [104 kB] Get:47 http://ftpmaster.internal/ubuntu noble/main s390x systemd-sysv s390x 255.4-1ubuntu5 [11.9 kB] Get:48 http://ftpmaster.internal/ubuntu noble/main s390x systemd s390x 255.4-1ubuntu5 [3533 kB] Get:49 http://ftpmaster.internal/ubuntu noble/main s390x libsystemd0 s390x 255.4-1ubuntu5 [443 kB] Get:50 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpam-modules-bin s390x 1.5.3-5ubuntu4 [57.2 kB] Get:51 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpam-modules s390x 1.5.3-5ubuntu4 [289 kB] Get:52 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libnettle8t64 s390x 3.9.1-2.2build1 [210 kB] Get:53 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libhogweed6t64 s390x 3.9.1-2.2build1 [204 kB] Get:54 http://ftpmaster.internal/ubuntu noble/main s390x libp11-kit0 s390x 0.25.3-4ubuntu1 [318 kB] Get:55 http://ftpmaster.internal/ubuntu noble/main s390x libunistring5 s390x 1.1-2 [544 kB] Get:56 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgnutls30t64 s390x 3.8.3-1.1ubuntu3 [944 kB] Get:57 http://ftpmaster.internal/ubuntu noble/main s390x libapt-pkg6.0t64 s390x 2.7.14 [1014 kB] Get:58 http://ftpmaster.internal/ubuntu noble-proposed/main s390x bzip2 s390x 1.0.8-5.1 [35.5 kB] Get:59 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libbz2-1.0 s390x 1.0.8-5.1 [40.0 kB] Get:60 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gcc-14-base s390x 14-20240330-1ubuntu2 [47.4 kB] Get:61 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgcc-s1 s390x 14-20240330-1ubuntu2 [35.9 kB] Get:62 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libstdc++6 s390x 14-20240330-1ubuntu2 [905 kB] Get:63 http://ftpmaster.internal/ubuntu noble/main s390x libudev1 s390x 255.4-1ubuntu5 [178 kB] Get:64 http://ftpmaster.internal/ubuntu noble/main s390x libxxhash0 s390x 0.8.2-2 [23.6 kB] Get:65 http://ftpmaster.internal/ubuntu noble-proposed/main s390x zlib1g s390x 1:1.3.dfsg-3.1ubuntu2 [75.9 kB] Get:66 http://ftpmaster.internal/ubuntu noble/main s390x libffi8 s390x 3.4.6-1 [23.0 kB] Get:67 http://ftpmaster.internal/ubuntu noble/main s390x libidn2-0 s390x 2.3.7-2 [67.2 kB] Get:68 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libdebconfclient0 s390x 0.271ubuntu3 [11.4 kB] Get:69 http://ftpmaster.internal/ubuntu noble/main s390x base-passwd s390x 3.6.3 [51.1 kB] Get:70 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsqlite3-0 s390x 3.45.1-1ubuntu2 [747 kB] Get:71 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gpg s390x 2.4.4-2ubuntu16 [589 kB] Get:72 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libreadline8t64 s390x 8.2-4build1 [171 kB] Get:73 http://ftpmaster.internal/ubuntu noble-proposed/main s390x readline-common all 8.2-4build1 [56.5 kB] Get:74 http://ftpmaster.internal/ubuntu noble/main s390x libncursesw6 s390x 6.4+20240113-1ubuntu1 [161 kB] Get:75 http://ftpmaster.internal/ubuntu noble/main s390x libtinfo6 s390x 6.4+20240113-1ubuntu1 [117 kB] Get:76 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gpg-agent s390x 2.4.4-2ubuntu16 [240 kB] Get:77 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gpgconf s390x 2.4.4-2ubuntu16 [111 kB] Get:78 http://ftpmaster.internal/ubuntu noble-proposed/main s390x pinentry-curses s390x 1.2.1-3ubuntu5 [37.6 kB] Get:79 http://ftpmaster.internal/ubuntu noble/main s390x init-system-helpers all 1.66ubuntu1 [39.4 kB] Get:80 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libnpth0t64 s390x 1.6-3.1build1 [8204 B] Get:81 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gpgv s390x 2.4.4-2ubuntu16 [165 kB] Get:82 http://ftpmaster.internal/ubuntu noble/main s390x ubuntu-keyring all 2023.11.28.1 [11.1 kB] Get:83 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libseccomp2 s390x 2.5.5-1ubuntu3 [53.4 kB] Get:84 http://ftpmaster.internal/ubuntu noble/main s390x apt-utils s390x 2.7.14 [214 kB] Get:85 http://ftpmaster.internal/ubuntu noble/main s390x apt s390x 2.7.14 [1390 kB] Get:86 http://ftpmaster.internal/ubuntu noble/main s390x debconf-i18n all 1.5.86 [205 kB] Get:87 http://ftpmaster.internal/ubuntu noble/main s390x debconf all 1.5.86 [124 kB] Get:88 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpam0g s390x 1.5.3-5ubuntu4 [69.7 kB] Get:89 http://ftpmaster.internal/ubuntu noble/main s390x libargon2-1 s390x 0~20190702+dfsg-4 [53.1 kB] Get:90 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libdevmapper1.02.1 s390x 2:1.02.185-3ubuntu3 [142 kB] Get:91 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libuuid1 s390x 2.39.3-9ubuntu3 [35.8 kB] Get:92 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libfdisk1 s390x 2.39.3-9ubuntu3 [151 kB] Get:93 http://ftpmaster.internal/ubuntu noble-proposed/main s390x mount s390x 2.39.3-9ubuntu3 [119 kB] Get:94 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcom-err2 s390x 1.47.0-2.4~exp1ubuntu3 [22.9 kB] Get:95 http://ftpmaster.internal/ubuntu noble/main s390x libkeyutils1 s390x 1.6.3-3 [9448 B] Get:96 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libnsl2 s390x 1.3.0-3build3 [44.1 kB] Get:97 http://ftpmaster.internal/ubuntu noble/main s390x linux-libc-dev s390x 6.8.0-20.20 [1592 kB] Get:98 http://ftpmaster.internal/ubuntu noble-proposed/main s390x base-files s390x 13ubuntu9 [73.7 kB] Get:99 http://ftpmaster.internal/ubuntu noble-proposed/main s390x debianutils s390x 5.17build1 [90.2 kB] Get:100 http://ftpmaster.internal/ubuntu noble-proposed/main s390x bash s390x 5.2.21-2ubuntu4 [845 kB] Get:101 http://ftpmaster.internal/ubuntu noble-proposed/main s390x bsdutils s390x 1:2.39.3-9ubuntu3 [96.3 kB] Get:102 http://ftpmaster.internal/ubuntu noble-proposed/main s390x coreutils s390x 9.4-3ubuntu5 [1482 kB] Get:103 http://ftpmaster.internal/ubuntu noble/main s390x tar s390x 1.35+dfsg-3 [269 kB] Get:104 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dpkg s390x 1.22.6ubuntu6 [1278 kB] Get:105 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dash s390x 0.5.12-6ubuntu5 [95.0 kB] Get:106 http://ftpmaster.internal/ubuntu noble/main s390x diffutils s390x 1:3.10-1 [187 kB] Get:107 http://ftpmaster.internal/ubuntu noble/main s390x grep s390x 3.11-4 [189 kB] Get:108 http://ftpmaster.internal/ubuntu noble/main s390x gzip s390x 1.12-1ubuntu2 [106 kB] Get:109 http://ftpmaster.internal/ubuntu noble/main s390x hostname s390x 3.23+nmu2ubuntu1 [11.1 kB] Get:110 http://ftpmaster.internal/ubuntu noble/main s390x login s390x 1:4.13+dfsg1-4ubuntu1 [202 kB] Get:111 http://ftpmaster.internal/ubuntu noble/main s390x ncurses-bin s390x 6.4+20240113-1ubuntu1 [198 kB] Get:112 http://ftpmaster.internal/ubuntu noble/main s390x sed s390x 4.9-2 [207 kB] Get:113 http://ftpmaster.internal/ubuntu noble-proposed/main s390x util-linux s390x 2.39.3-9ubuntu3 [1142 kB] Get:114 http://ftpmaster.internal/ubuntu noble/main s390x ncurses-base all 6.4+20240113-1ubuntu1 [25.4 kB] Get:115 http://ftpmaster.internal/ubuntu noble/main s390x sysvinit-utils s390x 3.08-6ubuntu2 [34.7 kB] Get:116 http://ftpmaster.internal/ubuntu noble-proposed/main s390x logsave s390x 1.47.0-2.4~exp1ubuntu3 [22.6 kB] Get:117 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libext2fs2t64 s390x 1.47.0-2.4~exp1ubuntu3 [234 kB] Get:118 http://ftpmaster.internal/ubuntu noble-proposed/main s390x e2fsprogs s390x 1.47.0-2.4~exp1ubuntu3 [615 kB] Get:119 http://ftpmaster.internal/ubuntu noble-proposed/main s390x optipng s390x 0.7.8+ds-1build2 [114 kB] Get:120 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpng16-16t64 s390x 1.6.43-5build1 [200 kB] Get:121 http://ftpmaster.internal/ubuntu noble/main s390x init s390x 1.66ubuntu1 [6188 B] Get:122 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsmartcols1 s390x 2.39.3-9ubuntu3 [68.1 kB] Get:123 http://ftpmaster.internal/ubuntu noble-proposed/main s390x uuid-runtime s390x 2.39.3-9ubuntu3 [33.4 kB] Get:124 http://ftpmaster.internal/ubuntu noble/main s390x libattr1 s390x 1:2.5.2-1 [11.7 kB] Get:125 http://ftpmaster.internal/ubuntu noble/main s390x libmd0 s390x 1.1.0-2 [24.7 kB] Get:126 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpam-runtime all 1.5.3-5ubuntu4 [40.8 kB] Get:127 http://ftpmaster.internal/ubuntu noble/main s390x libsemanage-common all 3.5-1build4 [10.1 kB] Get:128 http://ftpmaster.internal/ubuntu noble/main s390x libsepol2 s390x 3.5-2 [308 kB] Get:129 http://ftpmaster.internal/ubuntu noble/main s390x libsemanage2 s390x 3.5-1build4 [96.7 kB] Get:130 http://ftpmaster.internal/ubuntu noble/main s390x passwd s390x 1:4.13+dfsg1-4ubuntu1 [857 kB] Get:131 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libproc2-0 s390x 2:4.0.4-4ubuntu3 [59.8 kB] Get:132 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libss2 s390x 1.47.0-2.4~exp1ubuntu3 [17.2 kB] Get:133 http://ftpmaster.internal/ubuntu noble/main s390x mawk s390x 1.3.4.20240123-1 [133 kB] Get:134 http://ftpmaster.internal/ubuntu noble-proposed/main s390x procps s390x 2:4.0.4-4ubuntu3 [724 kB] Get:135 http://ftpmaster.internal/ubuntu noble/main s390x sensible-utils all 0.0.22 [22.5 kB] Get:136 http://ftpmaster.internal/ubuntu noble/main s390x ca-certificates all 20240203 [159 kB] Get:137 http://ftpmaster.internal/ubuntu noble/main s390x krb5-locales all 1.20.1-6ubuntu1 [13.8 kB] Get:138 http://ftpmaster.internal/ubuntu noble/main s390x tzdata all 2024a-1ubuntu1 [273 kB] Get:139 http://ftpmaster.internal/ubuntu noble/main s390x bash-completion all 1:2.11-8 [180 kB] Get:140 http://ftpmaster.internal/ubuntu noble-proposed/main s390x bsdextrautils s390x 2.39.3-9ubuntu3 [76.4 kB] Get:141 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgpm2 s390x 1.20.7-11 [14.7 kB] Get:142 http://ftpmaster.internal/ubuntu noble/main s390x libip4tc2 s390x 1.8.10-3ubuntu1 [24.2 kB] Get:143 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libjansson4 s390x 2.14-2build2 [33.2 kB] Get:144 http://ftpmaster.internal/ubuntu noble-proposed/main s390x psmisc s390x 23.7-1build1 [178 kB] Get:145 http://ftpmaster.internal/ubuntu noble-proposed/main s390x xz-utils s390x 5.6.1+really5.4.5-1build1 [269 kB] Get:146 http://ftpmaster.internal/ubuntu noble/main s390x libctf0 s390x 2.42-4ubuntu2 [98.4 kB] Get:147 http://ftpmaster.internal/ubuntu noble/main s390x libctf-nobfd0 s390x 2.42-4ubuntu2 [100 kB] Get:148 http://ftpmaster.internal/ubuntu noble/main s390x binutils-s390x-linux-gnu s390x 2.42-4ubuntu2 [2270 kB] Get:149 http://ftpmaster.internal/ubuntu noble/main s390x libbinutils s390x 2.42-4ubuntu2 [479 kB] Get:150 http://ftpmaster.internal/ubuntu noble/main s390x binutils s390x 2.42-4ubuntu2 [3042 B] Get:151 http://ftpmaster.internal/ubuntu noble/main s390x binutils-common s390x 2.42-4ubuntu2 [217 kB] Get:152 http://ftpmaster.internal/ubuntu noble/main s390x libsframe1 s390x 2.42-4ubuntu2 [14.2 kB] Get:153 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libubsan1 s390x 14-20240330-1ubuntu2 [1186 kB] Get:154 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgomp1 s390x 14-20240330-1ubuntu2 [151 kB] Get:155 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libitm1 s390x 14-20240330-1ubuntu2 [31.1 kB] Get:156 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libatomic1 s390x 14-20240330-1ubuntu2 [9386 B] Get:157 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libasan8 s390x 14-20240330-1ubuntu2 [2994 kB] Get:158 http://ftpmaster.internal/ubuntu noble-proposed/main s390x g++-13 s390x 13.2.0-23ubuntu3 [14.5 kB] Get:159 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gcc-13 s390x 13.2.0-23ubuntu3 [469 kB] Get:160 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libstdc++-13-dev s390x 13.2.0-23ubuntu3 [2494 kB] Get:161 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgcc-13-dev s390x 13.2.0-23ubuntu3 [1003 kB] Get:162 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcc1-0 s390x 14-20240330-1ubuntu2 [49.8 kB] Get:163 http://ftpmaster.internal/ubuntu noble-proposed/main s390x cpp-13 s390x 13.2.0-23ubuntu3 [1026 B] Get:164 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gcc-13-base s390x 13.2.0-23ubuntu3 [48.6 kB] Get:165 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gcc-13-s390x-linux-gnu s390x 13.2.0-23ubuntu3 [19.1 MB] Get:166 http://ftpmaster.internal/ubuntu noble-proposed/main s390x g++-13-s390x-linux-gnu s390x 13.2.0-23ubuntu3 [11.3 MB] Get:167 http://ftpmaster.internal/ubuntu noble-proposed/main s390x cpp-13-s390x-linux-gnu s390x 13.2.0-23ubuntu3 [9936 kB] Get:168 http://ftpmaster.internal/ubuntu noble/main s390x g++ s390x 4:13.2.0-7ubuntu1 [1096 B] Get:169 http://ftpmaster.internal/ubuntu noble/main s390x gcc s390x 4:13.2.0-7ubuntu1 [5014 B] Get:170 http://ftpmaster.internal/ubuntu noble/main s390x cpp s390x 4:13.2.0-7ubuntu1 [22.4 kB] Get:171 http://ftpmaster.internal/ubuntu noble/main s390x cpp-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [5308 B] Get:172 http://ftpmaster.internal/ubuntu noble/main s390x gcc-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [1208 B] Get:173 http://ftpmaster.internal/ubuntu noble/main s390x g++-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [956 B] Get:174 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dpkg-dev all 1.22.6ubuntu6 [1074 kB] Get:175 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libdpkg-perl all 1.22.6ubuntu6 [268 kB] Get:176 http://ftpmaster.internal/ubuntu noble/main s390x lto-disabled-list all 47 [12.4 kB] Get:177 http://ftpmaster.internal/ubuntu noble/main s390x libfakeroot s390x 1.33-1 [31.9 kB] Get:178 http://ftpmaster.internal/ubuntu noble/main s390x fakeroot s390x 1.33-1 [67.5 kB] Preconfiguring packages ... Fetched 105 MB in 6s (16.4 MB/s) (Reading database ... 13395 files and directories currently installed.) Preparing to unpack .../0-libnsl-dev_1.3.0-3build3_s390x.deb ... Unpacking libnsl-dev:s390x (1.3.0-3build3) over (1.3.0-2build2) ... Preparing to unpack .../1-libcrypt-dev_1%3a4.4.36-4_s390x.deb ... Unpacking libcrypt-dev:s390x (1:4.4.36-4) over (1:4.4.36-2) ... Preparing to unpack .../2-libc6-dev_2.39-0ubuntu8_s390x.deb ... Unpacking libc6-dev:s390x (2.39-0ubuntu8) over (2.38-1ubuntu6) ... Preparing to unpack .../3-libc-dev-bin_2.39-0ubuntu8_s390x.deb ... Unpacking libc-dev-bin (2.39-0ubuntu8) over (2.38-1ubuntu6) ... Preparing to unpack .../4-libtirpc-common_1.3.4+ds-1.1build1_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.1build1) over (1.3.3+ds-1) ... Preparing to unpack .../5-libtirpc-dev_1.3.4+ds-1.1build1_s390x.deb ... Unpacking libtirpc-dev:s390x (1.3.4+ds-1.1build1) over (1.3.3+ds-1) ... Preparing to unpack .../6-libnss-nisplus_1.3-5build1_s390x.deb ... 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Unpacking libgdbm6t64:s390x (1.23-5.1build1) ... dpkg: libgdbm-compat4:s390x: dependency problems, but removing anyway as you requested: libperl5.36:s390x depends on libgdbm-compat4 (>= 1.18-3). (Reading database ... 14817 files and directories currently installed.) Removing libgdbm-compat4:s390x (1.23-3) ... Selecting previously unselected package libgdbm-compat4t64:s390x. (Reading database ... 14812 files and directories currently installed.) Preparing to unpack .../libgdbm-compat4t64_1.23-5.1build1_s390x.deb ... Unpacking libgdbm-compat4t64:s390x (1.23-5.1build1) ... Selecting previously unselected package libperl5.38t64:s390x. Preparing to unpack .../libperl5.38t64_5.38.2-3.2build1_s390x.deb ... Unpacking libperl5.38t64:s390x (5.38.2-3.2build1) ... Preparing to unpack .../perl-base_5.38.2-3.2build1_s390x.deb ... Unpacking perl-base (5.38.2-3.2build1) over (5.36.0-9ubuntu1) ... Setting up perl-base (5.38.2-3.2build1) ... 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Unpacking systemd (255.4-1ubuntu5) over (253.5-1ubuntu6) ... dpkg: warning: unable to delete old directory '/lib/systemd/system-preset': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system-generators': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system/user@0.service.d': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system/user@.service.d': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system/user-.slice.d': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system/timers.target.wants': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system/systemd-localed.service.d': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system/sysinit.target.wants': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system/sockets.target.wants': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system/rescue.target.wants': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system/rc-local.service.d': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system/multi-user.target.wants': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system/initrd-root-fs.target.wants': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system/initrd-root-device.target.wants': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system/graphical.target.wants': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system/getty.target.wants': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/network': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/journald.conf.d': Directory not empty dpkg: warning: unable to delete old directory '/lib/modprobe.d': Directory not empty Preparing to unpack .../libsystemd0_255.4-1ubuntu5_s390x.deb ... 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Setting up libctf-nobfd0:s390x (2.42-4ubuntu2) ... Setting up krb5-locales (1.20.1-6ubuntu1) ... Setting up libgomp1:s390x (14-20240330-1ubuntu2) ... Setting up bzip2 (1.0.8-5.1) ... Setting up libsframe1:s390x (2.42-4ubuntu2) ... Setting up libfakeroot:s390x (1.33-1) ... Setting up libjansson4:s390x (2.14-2build2) ... Setting up libkrb5support0:s390x (1.20.1-6ubuntu2) ... Setting up tzdata (2024a-1ubuntu1) ... Current default time zone: 'Etc/UTC' Local time is now: Mon Apr 1 03:19:20 UTC 2024. Universal Time is now: Mon Apr 1 03:19:20 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up fakeroot (1.33-1) ... Setting up gcc-13-base:s390x (13.2.0-23ubuntu3) ... Setting up cpp-13-s390x-linux-gnu (13.2.0-23ubuntu3) ... Setting up bash-completion (1:2.11-8) ... Setting up xz-utils (5.6.1+really5.4.5-1build1) ... Setting up perl-modules-5.38 (5.38.2-3.2build1) ... Setting up libproc2-0:s390x (2:4.0.4-4ubuntu3) ... Setting up libpng16-16t64:s390x (1.6.43-5build1) ... Setting up libatomic1:s390x (14-20240330-1ubuntu2) ... Setting up libss2:s390x (1.47.0-2.4~exp1ubuntu3) ... Setting up libncursesw6:s390x (6.4+20240113-1ubuntu1) ... Setting up libk5crypto3:s390x (1.20.1-6ubuntu2) ... Setting up logsave (1.47.0-2.4~exp1ubuntu3) ... Setting up libdb5.3t64:s390x (5.3.28+dfsg2-6build1) ... Setting up libubsan1:s390x (14-20240330-1ubuntu2) ... Setting up sensible-utils (0.0.22) ... Setting up uuid-runtime (2.39.3-9ubuntu3) ... Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of restart. Setting up libcrypt-dev:s390x (1:4.4.36-4) ... Setting up libasan8:s390x (14-20240330-1ubuntu2) ... Setting up procps (2:4.0.4-4ubuntu3) ... Installing new version of config file /etc/sysctl.conf ... Setting up mawk (1.3.4.20240123-1) ... Setting up libkrb5-3:s390x (1.20.1-6ubuntu2) ... Setting up libperl5.38t64:s390x (5.38.2-3.2build1) ... Setting up libbinutils:s390x (2.42-4ubuntu2) ... Setting up libc-dev-bin (2.39-0ubuntu8) ... Setting up openssl (3.0.13-0ubuntu3) ... Setting up libgpg-error-l10n (1.47-3build1) ... Setting up readline-common (8.2-4build1) ... Setting up libcc1-0:s390x (14-20240330-1ubuntu2) ... Setting up liblocale-gettext-perl (1.07-6ubuntu5) ... Setting up libitm1:s390x (14-20240330-1ubuntu2) ... Setting up libctf0:s390x (2.42-4ubuntu2) ... Setting up pinentry-curses (1.2.1-3ubuntu5) ... Setting up apt-utils (2.7.14) ... Setting up binutils-s390x-linux-gnu (2.42-4ubuntu2) ... Setting up cpp-13 (13.2.0-23ubuntu3) ... Setting up cpp-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... Setting up debconf-i18n (1.5.86) ... Setting up e2fsprogs (1.47.0-2.4~exp1ubuntu3) ... Setting up binutils (2.42-4ubuntu2) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... rehash: warning: skipping ca-certificates.crt,it does not contain exactly one certificate or CRL 14 added, 5 removed; done. Setting up perl (5.38.2-3.2build1) ... Setting up optipng (0.7.8+ds-1build2) ... Setting up libgssapi-krb5-2:s390x (1.20.1-6ubuntu2) ... Setting up libdpkg-perl (1.22.6ubuntu6) ... Setting up libreadline8t64:s390x (8.2-4build1) ... Setting up libgcc-13-dev:s390x (13.2.0-23ubuntu3) ... Setting up cpp (4:13.2.0-7ubuntu1) ... Setting up gpgconf (2.4.4-2ubuntu16) ... Setting up libc6-dev:s390x (2.39-0ubuntu8) ... Setting up gpg (2.4.4-2ubuntu16) ... Setting up libstdc++-13-dev:s390x (13.2.0-23ubuntu3) ... Setting up gpg-agent (2.4.4-2ubuntu16) ... Setting up libtirpc3t64:s390x (1.3.4+ds-1.1build1) ... Setting up dpkg-dev (1.22.6ubuntu6) ... Setting up libtirpc-dev:s390x (1.3.4+ds-1.1build1) ... Setting up gcc-13-s390x-linux-gnu (13.2.0-23ubuntu3) ... Setting up gcc-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... Setting up g++-13-s390x-linux-gnu (13.2.0-23ubuntu3) ... Setting up gcc-13 (13.2.0-23ubuntu3) ... Setting up libnsl2:s390x (1.3.0-3build3) ... Setting up g++-13 (13.2.0-23ubuntu3) ... Setting up g++-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... Setting up libnss-nisplus:s390x (1.3-5build1) ... Setting up gcc (4:13.2.0-7ubuntu1) ... Setting up g++ (4:13.2.0-7ubuntu1) ... Setting up libnsl-dev:s390x (1.3.0-3build3) ... Processing triggers for libc-bin (2.39-0ubuntu8) ... Processing triggers for debianutils (5.17build1) ... (Reading database ... 15548 files and directories currently installed.) Purging configuration files for libssl3:s390x (3.0.10-1ubuntu2) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-27987401 s390x noble-proposed -c chroot:build-PACKAGEBUILD-27987401 --arch=s390x --dist=noble-proposed --nolog 'cctbx_2023.12+ds2+~3.17.0+ds1-4build2.dsc' Initiating build PACKAGEBUILD-27987401 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 5.4.0-173-generic #191-Ubuntu SMP Fri Feb 2 13:54:49 UTC 2024 s390x sbuild (Debian sbuild) 0.79.0 (05 February 2020) on bos01-s390x-004.buildd +===============================================================================+ | cctbx 2023.12+ds2+~3.17.0+ds1-4build2 (s390x) Mon, 01 Apr 2024 03:19:25 +0000 | +===============================================================================+ Package: cctbx Version: 2023.12+ds2+~3.17.0+ds1-4build2 Source Version: 2023.12+ds2+~3.17.0+ds1-4build2 Distribution: noble-proposed Machine Architecture: s390x Host Architecture: s390x Build Architecture: s390x Build Type: any I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-27987401/chroot-autobuild' with '<>' I: NOTICE: Log filtering will replace 'build/cctbx-jAT8iA/resolver-GkcNGV' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- cctbx_2023.12+ds2+~3.17.0+ds1-4build2.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/cctbx-jAT8iA/cctbx-2023.12+ds2+~3.17.0+ds1' with '<>' I: NOTICE: Log filtering will replace 'build/cctbx-jAT8iA' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), dh-exec, dh-python, dh-sequence-numpy3, dh-sequence-python3, jq, libann-cctbx-dev (>= 1.1.2+doc-9~), libantlr3c-dev, libboost-dev, libboost-numpy-dev, libboost-python-dev, libboost-thread-dev, libcbf-dev (>= 0.9.7+dfsg1-2~), libclipper-dev, libeigen3-dev, libexpat1-dev, libfftw3-dev, libgl-dev, libglu1-mesa-dev, libhdf5-dev, liblz4-dev, libssm-dev, libtiff-dev, libtool, pybind11-dev, python3-all-dev:any, python3-biopython, python3-h5py (>= 3), python3-matplotlib, python3-mrcfile, python3-msgpack, python3-numpy, python3-nxmx, python3-orderedset, python3-pint, python3-pip, python3-procrunner, python3-psutil, python3-pycbf (>= 0.9.7+dfsg1-2~), python3-pymol, python3-pytest, python3-requests, python3-scipy, python3-setuptools, python3-six, python3-tqdm, python3-wxgtk4.0, rsync, scons, build-essential, fakeroot Filtered Build-Depends: debhelper-compat (= 13), dh-exec, dh-python, dh-sequence-numpy3, dh-sequence-python3, jq, libann-cctbx-dev (>= 1.1.2+doc-9~), libantlr3c-dev, libboost-dev, libboost-numpy-dev, libboost-python-dev, libboost-thread-dev, libcbf-dev (>= 0.9.7+dfsg1-2~), libclipper-dev, libeigen3-dev, libexpat1-dev, libfftw3-dev, libgl-dev, libglu1-mesa-dev, libhdf5-dev, liblz4-dev, libssm-dev, libtiff-dev, libtool, pybind11-dev, python3-all-dev:any, python3-biopython, python3-h5py (>= 3), python3-matplotlib, python3-mrcfile, python3-msgpack, python3-numpy, python3-nxmx, python3-orderedset, python3-pint, python3-pip, python3-procrunner, python3-psutil, python3-pycbf (>= 0.9.7+dfsg1-2~), python3-pymol, python3-pytest, python3-requests, python3-scipy, python3-setuptools, python3-six, python3-tqdm, python3-wxgtk4.0, rsync, scons, build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [683 B] Get:5 copy:/<>/apt_archive ./ Packages [759 B] Fetched 2405 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: apt-utils bash-completion debconf-i18n krb5-locales libgpg-error-l10n libgpm2 libip4tc2 liblocale-gettext-perl libnsl-dev libnsl2 libnss-nis libnss-nisplus libperl5.36 libtext-charwidth-perl libtext-iconv-perl libtext-wrapi18n-perl libtirpc-common libtirpc-dev libtirpc3t64 libunistring2 perl-modules-5.36 psmisc uuid-runtime Use 'apt autoremove' to remove them. The following additional packages will be installed: adwaita-icon-theme at-spi2-common autoconf automake autopoint autotools-dev blt dbus dbus-bin dbus-daemon dbus-session-bus-common dbus-system-bus-common dbus-user-session dconf-gsettings-backend dconf-service debhelper debugedit dh-autoreconf dh-exec dh-python dh-strip-nondeterminism dwz fftw-dev fftw2 file fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome fonts-lato fonts-lyx fonts-urw-base35 gettext gettext-base groff-base gtk-update-icon-cache hdf5-helpers hicolor-icon-theme humanity-icon-theme ibverbs-providers intltool-debian jq libaec-dev libaec0 libann-cctbx-dev libann-cctbx0 libantlr3c-3.4-0 libantlr3c-dev libarchive-zip-perl libatk-bridge2.0-0t64 libatk1.0-0t64 libatspi2.0-0t64 libavahi-client3 libavahi-common-data libavahi-common3 libblas3 libboost-atomic1.83-dev libboost-atomic1.83.0 libboost-chrono1.83-dev libboost-chrono1.83.0t64 libboost-date-time1.83-dev libboost-date-time1.83.0 libboost-dev libboost-numpy-dev libboost-numpy1.83-dev libboost-numpy1.83.0 libboost-python-dev libboost-python1.83-dev libboost-python1.83.0 libboost-serialization1.83-dev libboost-serialization1.83.0 libboost-system1.83-dev libboost-system1.83.0 libboost-thread-dev libboost-thread1.83-dev libboost-thread1.83.0 libboost1.83-dev libbrotli1 libbsd0 libcairo-gobject2 libcairo2 libcbf-dev libcbf1t64 libccp4-data libccp4-dev libccp4c0 libccp4f0 libclipper-dev libclipper2 libcolord2 libcups2t64 libcurl3-gnutls libcurl4-openssl-dev libcurl4t64 libdatrie1 libdbus-1-3 libdconf1 libdebhelper-perl libdeflate-dev libdeflate0 libdouble-conversion3 libdrm-amdgpu1 libdrm-common libdrm-nouveau2 libdrm-radeon1 libdrm2 libdw1t64 libedit2 libegl-mesa0 libegl1 libeigen3-dev libelf1t64 libepoxy0 libevdev2 libevent-core-2.1-7 libevent-pthreads-2.1-7 libexpat1 libexpat1-dev libfabric1 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-single3 libfile-stripnondeterminism-perl libfontconfig1 libfontenc1 libfreetype6 libfribidi0 libgbm1 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgfortran5 libgl-dev libgl1 libgl1-mesa-dri libglapi-mesa libglew2.2 libglib2.0-0t64 libglu1-mesa libglu1-mesa-dev libglvnd0 libglx-dev libglx-mesa0 libglx0 libgraphite2-3 libgtk-3-0t64 libgtk-3-common libgudev-1.0-0 libharfbuzz0b libhdf5-103-1t64 libhdf5-cpp-103-1t64 libhdf5-dev libhdf5-fortran-102t64 libhdf5-hl-100t64 libhdf5-hl-cpp-100t64 libhdf5-hl-fortran-100t64 libhwloc-plugins libhwloc15 libibverbs1 libice6 libicu74 libimagequant0 libinput-bin libinput10 libjbig-dev libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjq1 libjs-jquery libjs-jquery-ui libjs-sphinxdoc libjs-underscore liblapack3 liblbfgsb0 liblcms2-2 libldap2 libllvm17t64 liblz4-dev liblzf1 liblzma-dev libmagic-mgc libmagic1t64 libmd4c0 libmmdb2-0 libmmdb2-dev libmtdev1t64 libmunge2 libnetcdf19 libnghttp2-14 libnl-3-200 libnl-route-3-200 libnotify4 libonig5 libopengl-dev libopengl0 libopenjp2-7 libopenmpi3t64 libpam-systemd libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpciaccess0 libpcre2-16-0 libpcre2-32-0 libpipeline1 libpixman-1-0 libpkgconf3 libpmix2t64 libpopt0 libpsl5t64 libpthread-stubs0-dev libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.12-dev libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 libqhull-r8.0 libqt5core5t64 libqt5dbus5t64 libqt5designer5 libqt5gui5t64 libqt5help5 libqt5network5t64 libqt5opengl5t64 libqt5printsupport5t64 libqt5sql5t64 libqt5test5t64 libqt5widgets5t64 libqt5xml5t64 libraqm0 librdmacm1t64 librtmp1 libsasl2-2 libsasl2-modules-db libsensors-config libsensors5 libsharpyuv-dev libsharpyuv0 libsm6 libssh-4 libssl-dev libssm-dev libssm2 libsub-override-perl libsz2 libtcl8.6 libthai-data libthai0 libtiff-dev libtiff6 libtiffxx6 libtk8.6 libtool libuchardet0 libvulkan1 libwacom-common libwacom9 libwayland-client0 libwayland-cursor0 libwayland-egl1 libwayland-server0 libwebp-dev libwebp7 libwebpdecoder3 libwebpdemux2 libwebpmux3 libwxbase3.2-1t64 libwxgtk-gl3.2-1t64 libwxgtk3.2-1t64 libx11-6 libx11-data libx11-dev libx11-xcb1 libxau-dev libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present0 libxcb-randr0 libxcb-render-util0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-util1 libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxcb1 libxcb1-dev libxcomposite1 libxcursor1 libxdamage1 libxdmcp-dev libxdmcp6 libxext6 libxfixes3 libxft2 libxi6 libxinerama1 libxkbcommon-x11-0 libxkbcommon0 libxml2 libxnvctrl0 libxrandr2 libxrender1 libxshmfence1 libxslt1.1 libxss1 libxtst6 libxxf86vm1 libzstd-dev m4 man-db media-types netbase ocl-icd-libopencl1 pkg-config pkgconf pkgconf-bin po-debconf pybind11-dev pymol-data python-matplotlib-data python3 python3-all python3-all-dev python3-appdirs python3-attr python3-biopython python3-brotli python3-cairo python3-certifi python3-chardet python3-contourpy python3-cycler python3-dateutil python3-decorator python3-dev python3-fonttools python3-freetype python3-fs python3-h5py python3-h5py-serial python3-idna python3-iniconfig python3-kiwisolver python3-lxml python3-lz4 python3-matplotlib python3-minimal python3-mpmath python3-mrcfile python3-msgpack python3-numpy python3-nxmx python3-opengl python3-orderedset python3-packaging python3-pil python3-pil.imagetk python3-pint python3-pip python3-pkg-resources python3-pluggy python3-procrunner python3-psutil python3-pycbf python3-pymol python3-pyparsing python3-pyqt5 python3-pyqt5.qtopengl python3-pyqt5.sip python3-pytest python3-reportlab python3-requests python3-rlpycairo python3-scipy python3-setuptools python3-six python3-sympy python3-tk python3-tqdm python3-tz python3-ufolib2 python3-urllib3 python3-wheel python3-wxgtk4.0 python3.12 python3.12-dev python3.12-minimal rsync scons sfftw-dev sfftw2 sgml-base shared-mime-info sphinx-rtd-theme-common tk8.6-blt2.5 ubuntu-mono unicode-data w3c-sgml-lib x11-common x11proto-dev xfonts-encodings xfonts-utils xkb-data xml-core xorg-sgml-doctools xtrans-dev zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc blt-demo dh-make flit python3-build python3-installer mpi-defaults-bin fonts-freefont-otf | fonts-freefont-ttf fonts-texgyre gettext-doc libasprintf-dev libgettextpo-dev groff libboost-doc libboost1.83-doc gccxml libboost-container1.83-dev libboost-context1.83-dev libboost-contract1.83-dev libboost-coroutine1.83-dev libboost-exception1.83-dev libboost-fiber1.83-dev libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev libboost-program-options1.83-dev libboost-random1.83-dev libboost-regex1.83-dev libboost-stacktrace1.83-dev libboost-test1.83-dev libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev libclipper-doc colord cups-common libcurl4-doc libidn-dev libkrb5-dev libldap2-dev librtmp-dev libssh2-1-dev libeigen3-doc libfftw3-doc glew-utils low-memory-monitor gvfs libhdf5-doc libjs-jquery-ui-docs liblcms2-utils liblzma-doc notification-daemon pciutils qgnomeplatform-qt5 qt5-image-formats-plugins lm-sensors libssl-doc tcl8.6 tk8.6 libtool-doc gfortran | fortran95-compiler gcj-jdk libwacom-bin libx11-doc libxcb-doc m4-doc apparmor less www-browser opencl-icd libmail-box-perl pybind11-doc python3-doc python3-venv python-attr-doc bwa clustalo clustalw dialign dssp emboss fasttree mafft muscle3 phylip phyml prank probcons python3-mysqldb python3-mmtf python3-rdflib python3-psycopg2 raxml samtools t-coffee wise python-cycler-doc python-h5py-doc python-lxml-doc cm-super-minimal dvipng ffmpeg fonts-staypuft ghostscript gir1.2-gtk-3.0 inkscape ipython3 librsvg2-common python3-cairocffi python3-gi python3-gi-cairo python3-gobject python3-sip python3-tornado texlive-extra-utils texlive-latex-extra python-mpmath-doc python3-gmpy2 gfortran libgle3 python-pil-doc python-pyparsing-doc pdf-viewer python3-egenix-mxtexttools python-reportlab-doc rl-accel rl-renderpm python3-cryptography python3-openssl python3-socks python-requests-doc python-scipy-doc python-setuptools-doc texlive-fonts-extra python-sympy-doc tix python3-tk-dbg wx3.2-doc python3.12-venv python3.12-doc binfmt-support openssh-client openssh-server python3-braceexpand scons-doc sgml-base-doc Recommended packages: librsvg2-common curl | wget | lynx at-spi2-core libarchive-cpio-perl libgdk-pixbuf2.0-bin libgl1-amber-dri libglib2.0-data xdg-user-dirs libgtk-3-bin javascript-common libldap-common publicsuffix qttranslations5-l10n libqt5svg5 qt5-gtk-platformtheme qtwayland5 libqt5sql5-sqlite | libqt5sql5-mysql | libqt5sql5-odbc | libqt5sql5-psql | libqt5sql5-tds | libqt5sql5-ibase libsasl2-modules libltdl-dev mesa-vulkan-drivers | vulkan-icd libmail-sendmail-perl python-biopython-doc ncbi-blast+ python3-bs4 python3-cssselect python3-html5lib libglut-dev python3-olefile python3-pygments fonts-dejavu-extra isympy-common The following NEW packages will be installed: adwaita-icon-theme at-spi2-common autoconf automake autopoint autotools-dev blt dbus dbus-bin dbus-daemon dbus-session-bus-common dbus-system-bus-common dbus-user-session dconf-gsettings-backend dconf-service debhelper debugedit dh-autoreconf dh-exec dh-python dh-strip-nondeterminism dwz fftw-dev fftw2 file fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome fonts-lato fonts-lyx fonts-urw-base35 gettext gettext-base groff-base gtk-update-icon-cache hdf5-helpers hicolor-icon-theme humanity-icon-theme ibverbs-providers intltool-debian jq libaec-dev libaec0 libann-cctbx-dev libann-cctbx0 libantlr3c-3.4-0 libantlr3c-dev libarchive-zip-perl libatk-bridge2.0-0t64 libatk1.0-0t64 libatspi2.0-0t64 libavahi-client3 libavahi-common-data libavahi-common3 libblas3 libboost-atomic1.83-dev libboost-atomic1.83.0 libboost-chrono1.83-dev libboost-chrono1.83.0t64 libboost-date-time1.83-dev libboost-date-time1.83.0 libboost-dev libboost-numpy-dev libboost-numpy1.83-dev libboost-numpy1.83.0 libboost-python-dev libboost-python1.83-dev libboost-python1.83.0 libboost-serialization1.83-dev libboost-serialization1.83.0 libboost-system1.83-dev libboost-system1.83.0 libboost-thread-dev libboost-thread1.83-dev libboost-thread1.83.0 libboost1.83-dev libbrotli1 libbsd0 libcairo-gobject2 libcairo2 libcbf-dev libcbf1t64 libccp4-data libccp4-dev libccp4c0 libccp4f0 libclipper-dev libclipper2 libcolord2 libcups2t64 libcurl3-gnutls libcurl4-openssl-dev libcurl4t64 libdatrie1 libdbus-1-3 libdconf1 libdebhelper-perl libdeflate-dev libdeflate0 libdouble-conversion3 libdrm-amdgpu1 libdrm-common libdrm-nouveau2 libdrm-radeon1 libdrm2 libdw1t64 libedit2 libegl-mesa0 libegl1 libeigen3-dev libelf1t64 libepoxy0 libevdev2 libevent-core-2.1-7 libevent-pthreads-2.1-7 libexpat1 libexpat1-dev libfabric1 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-single3 libfile-stripnondeterminism-perl libfontconfig1 libfontenc1 libfreetype6 libfribidi0 libgbm1 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgfortran5 libgl-dev libgl1 libgl1-mesa-dri libglapi-mesa libglew2.2 libglib2.0-0t64 libglu1-mesa libglu1-mesa-dev libglvnd0 libglx-dev libglx-mesa0 libglx0 libgraphite2-3 libgtk-3-0t64 libgtk-3-common libgudev-1.0-0 libharfbuzz0b libhdf5-103-1t64 libhdf5-cpp-103-1t64 libhdf5-dev libhdf5-fortran-102t64 libhdf5-hl-100t64 libhdf5-hl-cpp-100t64 libhdf5-hl-fortran-100t64 libhwloc-plugins libhwloc15 libibverbs1 libice6 libicu74 libimagequant0 libinput-bin libinput10 libjbig-dev libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjq1 libjs-jquery libjs-jquery-ui libjs-sphinxdoc libjs-underscore liblapack3 liblbfgsb0 liblcms2-2 libldap2 libllvm17t64 liblz4-dev liblzf1 liblzma-dev libmagic-mgc libmagic1t64 libmd4c0 libmmdb2-0 libmmdb2-dev libmtdev1t64 libmunge2 libnetcdf19 libnghttp2-14 libnl-3-200 libnl-route-3-200 libnotify4 libonig5 libopengl-dev libopengl0 libopenjp2-7 libopenmpi3t64 libpam-systemd libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpciaccess0 libpcre2-16-0 libpcre2-32-0 libpipeline1 libpixman-1-0 libpkgconf3 libpmix2t64 libpopt0 libpsl5t64 libpthread-stubs0-dev libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.12-dev libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 libqhull-r8.0 libqt5core5t64 libqt5dbus5t64 libqt5designer5 libqt5gui5t64 libqt5help5 libqt5network5t64 libqt5opengl5t64 libqt5printsupport5t64 libqt5sql5t64 libqt5test5t64 libqt5widgets5t64 libqt5xml5t64 libraqm0 librdmacm1t64 librtmp1 libsasl2-2 libsasl2-modules-db libsensors-config libsensors5 libsharpyuv-dev libsharpyuv0 libsm6 libssh-4 libssl-dev libssm-dev libssm2 libsub-override-perl libsz2 libtcl8.6 libthai-data libthai0 libtiff-dev libtiff6 libtiffxx6 libtk8.6 libtool libuchardet0 libvulkan1 libwacom-common libwacom9 libwayland-client0 libwayland-cursor0 libwayland-egl1 libwayland-server0 libwebp-dev libwebp7 libwebpdecoder3 libwebpdemux2 libwebpmux3 libwxbase3.2-1t64 libwxgtk-gl3.2-1t64 libwxgtk3.2-1t64 libx11-6 libx11-data libx11-dev libx11-xcb1 libxau-dev libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present0 libxcb-randr0 libxcb-render-util0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-util1 libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxcb1 libxcb1-dev libxcomposite1 libxcursor1 libxdamage1 libxdmcp-dev libxdmcp6 libxext6 libxfixes3 libxft2 libxi6 libxinerama1 libxkbcommon-x11-0 libxkbcommon0 libxml2 libxnvctrl0 libxrandr2 libxrender1 libxshmfence1 libxslt1.1 libxss1 libxtst6 libxxf86vm1 libzstd-dev m4 man-db media-types netbase ocl-icd-libopencl1 pkg-config pkgconf pkgconf-bin po-debconf pybind11-dev pymol-data python-matplotlib-data python3 python3-all python3-all-dev python3-appdirs python3-attr python3-biopython python3-brotli python3-cairo python3-certifi python3-chardet python3-contourpy python3-cycler python3-dateutil python3-decorator python3-dev python3-fonttools python3-freetype python3-fs python3-h5py python3-h5py-serial python3-idna python3-iniconfig python3-kiwisolver python3-lxml python3-lz4 python3-matplotlib python3-minimal python3-mpmath python3-mrcfile python3-msgpack python3-numpy python3-nxmx python3-opengl python3-orderedset python3-packaging python3-pil python3-pil.imagetk python3-pint python3-pip python3-pkg-resources python3-pluggy python3-procrunner python3-psutil python3-pycbf python3-pymol python3-pyparsing python3-pyqt5 python3-pyqt5.qtopengl python3-pyqt5.sip python3-pytest python3-reportlab python3-requests python3-rlpycairo python3-scipy python3-setuptools python3-six python3-sympy python3-tk python3-tqdm python3-tz python3-ufolib2 python3-urllib3 python3-wheel python3-wxgtk4.0 python3.12 python3.12-dev python3.12-minimal rsync sbuild-build-depends-main-dummy scons sfftw-dev sfftw2 sgml-base shared-mime-info sphinx-rtd-theme-common tk8.6-blt2.5 ubuntu-mono unicode-data w3c-sgml-lib x11-common x11proto-dev xfonts-encodings xfonts-utils xkb-data xml-core xorg-sgml-doctools xtrans-dev zlib1g-dev 0 upgraded, 425 newly installed, 0 to remove and 0 not upgraded. Need to get 258 MB of archives. After this operation, 1248 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [980 B] Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpython3.12-minimal s390x 3.12.2-4build4 [829 kB] Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libexpat1 s390x 2.6.1-2build1 [94.4 kB] Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3.12-minimal s390x 3.12.2-4build4 [2437 kB] Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-minimal s390x 3.12.2-0ubuntu2 [27.1 kB] Get:6 http://ftpmaster.internal/ubuntu noble/main s390x media-types all 10.1.0 [27.5 kB] Get:7 http://ftpmaster.internal/ubuntu noble/main s390x netbase all 6.4 [13.1 kB] Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpython3.12-stdlib s390x 3.12.2-4build4 [2046 kB] Get:9 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3.12 s390x 3.12.2-4build4 [645 kB] Get:10 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpython3-stdlib s390x 3.12.2-0ubuntu2 [9854 B] Get:11 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3 s390x 3.12.2-0ubuntu2 [24.1 kB] Get:12 http://ftpmaster.internal/ubuntu noble/main s390x libpopt0 s390x 1.19+dfsg-1 [28.9 kB] Get:13 http://ftpmaster.internal/ubuntu noble-proposed/main s390x rsync s390x 3.2.7-1build2 [446 kB] Get:14 http://ftpmaster.internal/ubuntu noble/main s390x fonts-lato all 2.015-1 [2781 kB] Get:15 http://ftpmaster.internal/ubuntu noble/main s390x sgml-base all 1.31 [11.4 kB] Get:16 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libdbus-1-3 s390x 1.14.10-4ubuntu3 [214 kB] Get:17 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dbus-bin s390x 1.14.10-4ubuntu3 [41.4 kB] Get:18 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dbus-session-bus-common all 1.14.10-4ubuntu3 [80.4 kB] Get:19 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dbus-daemon s390x 1.14.10-4ubuntu3 [118 kB] Get:20 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dbus-system-bus-common all 1.14.10-4ubuntu3 [81.5 kB] Get:21 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dbus s390x 1.14.10-4ubuntu3 [24.3 kB] Get:22 http://ftpmaster.internal/ubuntu noble/main s390x libpam-systemd s390x 255.4-1ubuntu5 [242 kB] Get:23 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dbus-user-session s390x 1.14.10-4ubuntu3 [9968 B] Get:24 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libbsd0 s390x 0.12.1-1build1 [46.8 kB] Get:25 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libelf1t64 s390x 0.190-1.1build3 [69.6 kB] Get:26 http://ftpmaster.internal/ubuntu noble/main s390x libfribidi0 s390x 1.0.13-3 [27.2 kB] Get:27 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libglib2.0-0t64 s390x 2.80.0-6build1 [1338 kB] Get:28 http://ftpmaster.internal/ubuntu noble/main s390x libicu74 s390x 74.2-1ubuntu1 [10.9 MB] Get:29 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libxml2 s390x 2.9.14+dfsg-1.3ubuntu3 [818 kB] Get:30 http://ftpmaster.internal/ubuntu noble/main s390x python3-pkg-resources all 68.1.2-2ubuntu1 [168 kB] Get:31 http://ftpmaster.internal/ubuntu noble-proposed/main s390x shared-mime-info s390x 2.4-1build2 [474 kB] Get:32 http://ftpmaster.internal/ubuntu noble/main s390x xkb-data all 2.41-2 [395 kB] Get:33 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libmagic-mgc s390x 1:5.45-3build1 [305 kB] Get:34 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libmagic1t64 s390x 1:5.45-3build1 [93.2 kB] Get:35 http://ftpmaster.internal/ubuntu noble-proposed/main s390x file s390x 1:5.45-3build1 [22.2 kB] Get:36 http://ftpmaster.internal/ubuntu noble/main s390x gettext-base s390x 0.21-14ubuntu1 [39.4 kB] Get:37 http://ftpmaster.internal/ubuntu noble/main s390x libuchardet0 s390x 0.0.8-1 [76.1 kB] Get:38 http://ftpmaster.internal/ubuntu noble-proposed/main s390x groff-base s390x 1.23.0-3build2 [1049 kB] Get:39 http://ftpmaster.internal/ubuntu noble/main s390x libdrm-common all 2.4.120-2 [7998 B] Get:40 http://ftpmaster.internal/ubuntu noble/main s390x libdrm2 s390x 2.4.120-2 [43.8 kB] Get:41 http://ftpmaster.internal/ubuntu noble/main s390x libedit2 s390x 3.1-20230828-1 [106 kB] Get:42 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libnghttp2-14 s390x 1.59.0-1build2 [77.8 kB] Get:43 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpipeline1 s390x 1.5.7-2 [25.0 kB] Get:44 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpsl5t64 s390x 0.21.2-1.1build1 [57.7 kB] Get:45 http://ftpmaster.internal/ubuntu noble/main s390x libxau6 s390x 1:1.0.9-1build5 [7522 B] Get:46 http://ftpmaster.internal/ubuntu noble/main s390x libxdmcp6 s390x 1:1.1.3-0ubuntu5 [10.8 kB] Get:47 http://ftpmaster.internal/ubuntu noble/main s390x libxcb1 s390x 1.15-1 [48.3 kB] Get:48 http://ftpmaster.internal/ubuntu noble/main s390x libx11-data all 2:1.8.7-1 [115 kB] Get:49 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Get:59 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libtiff6 s390x 4.5.1+git230720-4ubuntu2 [218 kB] Get:60 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgdk-pixbuf-2.0-0 s390x 2.42.10+dfsg-3ubuntu2 [154 kB] Get:61 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gtk-update-icon-cache s390x 3.24.41-1.1ubuntu4 [51.4 kB] Get:62 http://ftpmaster.internal/ubuntu noble/main s390x hicolor-icon-theme all 0.17-2 [9976 B] Get:63 http://ftpmaster.internal/ubuntu noble/main s390x humanity-icon-theme all 0.6.16 [1282 kB] Get:64 http://ftpmaster.internal/ubuntu noble/main s390x ubuntu-mono all 24.04-0ubuntu1 [151 kB] Get:65 http://ftpmaster.internal/ubuntu noble-proposed/main s390x adwaita-icon-theme all 46.0-1 [723 kB] Get:66 http://ftpmaster.internal/ubuntu noble-proposed/main s390x at-spi2-common all 2.52.0-1 [8586 B] Get:67 http://ftpmaster.internal/ubuntu noble/main s390x m4 s390x 1.4.19-4 [255 kB] Get:68 http://ftpmaster.internal/ubuntu noble/main s390x autoconf all 2.71-3 [339 kB] Get:69 http://ftpmaster.internal/ubuntu noble/main s390x autotools-dev all 20220109.1 [44.9 kB] Get:70 http://ftpmaster.internal/ubuntu noble/main s390x automake all 1:1.16.5-1.3ubuntu1 [558 kB] Get:71 http://ftpmaster.internal/ubuntu noble/main s390x autopoint all 0.21-14ubuntu1 [422 kB] Get:72 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libtcl8.6 s390x 8.6.14+dfsg-1build1 [1038 kB] Get:73 http://ftpmaster.internal/ubuntu noble/main s390x libbrotli1 s390x 1.1.0-2build1 [375 kB] Get:74 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libfreetype6 s390x 2.13.2+dfsg-1build3 [437 kB] Get:75 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] Get:76 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-core all 2.37-8 [835 kB] Get:77 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libfontenc1 s390x 1:1.1.8-1build1 [14.8 kB] Get:78 http://ftpmaster.internal/ubuntu noble/main s390x x11-common all 1:7.7+23ubuntu2 [23.4 kB] Get:79 http://ftpmaster.internal/ubuntu noble/main s390x xfonts-encodings all 1:1.0.5-0ubuntu2 [578 kB] Get:80 http://ftpmaster.internal/ubuntu noble/main s390x xfonts-utils s390x 1:7.7+6build2 [94.8 kB] Get:81 http://ftpmaster.internal/ubuntu noble/main s390x fonts-urw-base35 all 20200910-8 [11.0 MB] Get:82 http://ftpmaster.internal/ubuntu noble-proposed/main s390x fontconfig-config s390x 2.15.0-1.1ubuntu2 [37.4 kB] Get:83 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libfontconfig1 s390x 2.15.0-1.1ubuntu2 [150 kB] Get:84 http://ftpmaster.internal/ubuntu noble/main s390x libxrender1 s390x 1:0.9.10-1.1 [19.4 kB] Get:85 http://ftpmaster.internal/ubuntu noble/main s390x libxft2 s390x 2.3.6-1 [44.3 kB] Get:86 http://ftpmaster.internal/ubuntu noble/main s390x libxss1 s390x 1:1.2.3-1build2 [8192 B] Get:87 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libtk8.6 s390x 8.6.14-1build1 [833 kB] Get:88 http://ftpmaster.internal/ubuntu noble/main s390x tk8.6-blt2.5 s390x 2.5.3+dfsg-7 [661 kB] Get:89 http://ftpmaster.internal/ubuntu noble/main s390x blt s390x 2.5.3+dfsg-7 [4826 B] Get:90 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libdconf1 s390x 0.40.0-4build2 [40.3 kB] Get:91 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dconf-service s390x 0.40.0-4build2 [28.6 kB] Get:92 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dconf-gsettings-backend s390x 0.40.0-4build2 [23.2 kB] Get:93 http://ftpmaster.internal/ubuntu noble/main s390x libdebhelper-perl all 13.14.1ubuntu5 [89.8 kB] Get:94 http://ftpmaster.internal/ubuntu noble/main s390x libtool all 2.4.7-7 [166 kB] Get:95 http://ftpmaster.internal/ubuntu noble/main s390x dh-autoreconf all 20 [16.1 kB] Get:96 http://ftpmaster.internal/ubuntu noble/main s390x libarchive-zip-perl all 1.68-1 [90.2 kB] Get:97 http://ftpmaster.internal/ubuntu noble/main s390x libsub-override-perl all 0.10-1 [10.0 kB] Get:98 http://ftpmaster.internal/ubuntu noble/main s390x libfile-stripnondeterminism-perl all 1.13.1-1 [18.1 kB] Get:99 http://ftpmaster.internal/ubuntu noble/main s390x dh-strip-nondeterminism all 1.13.1-1 [5362 B] Get:100 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libdw1t64 s390x 0.190-1.1build3 [286 kB] Get:101 http://ftpmaster.internal/ubuntu noble-proposed/main s390x debugedit s390x 1:5.0-5build1 [50.5 kB] Get:102 http://ftpmaster.internal/ubuntu noble/main s390x dwz s390x 0.15-1build5 [122 kB] Get:103 http://ftpmaster.internal/ubuntu noble/main s390x gettext s390x 0.21-14ubuntu1 [917 kB] Get:104 http://ftpmaster.internal/ubuntu noble/main s390x intltool-debian all 0.35.0+20060710.6 [23.2 kB] Get:105 http://ftpmaster.internal/ubuntu noble/main s390x po-debconf all 1.0.21+nmu1 [233 kB] Get:106 http://ftpmaster.internal/ubuntu noble/main s390x debhelper all 13.14.1ubuntu5 [869 kB] Get:107 http://ftpmaster.internal/ubuntu noble/main s390x python3-setuptools all 68.1.2-2ubuntu1 [396 kB] Get:108 http://ftpmaster.internal/ubuntu noble/universe s390x dh-python all 6.20231223ubuntu2 [111 kB] Get:109 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libevent-core-2.1-7 s390x 2.1.12-stable-9build1 [94.3 kB] Get:110 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libevent-pthreads-2.1-7 s390x 2.1.12-stable-9build1 [7778 B] Get:111 http://ftpmaster.internal/ubuntu noble/main s390x libnl-3-200 s390x 3.7.0-0.3 [59.6 kB] Get:112 http://ftpmaster.internal/ubuntu noble/main s390x libnl-route-3-200 s390x 3.7.0-0.3 [191 kB] Get:113 http://ftpmaster.internal/ubuntu noble/main s390x libibverbs1 s390x 50.0-2build1 [70.0 kB] Get:114 http://ftpmaster.internal/ubuntu noble/main s390x ibverbs-providers s390x 50.0-2build1 [408 kB] Get:115 http://ftpmaster.internal/ubuntu noble/main s390x librdmacm1t64 s390x 50.0-2build1 [74.1 kB] Get:116 http://ftpmaster.internal/ubuntu noble/universe s390x libfabric1 s390x 1.17.0-3build1 [566 kB] Get:117 http://ftpmaster.internal/ubuntu noble/universe s390x libhwloc15 s390x 2.10.0-1 [174 kB] Get:118 http://ftpmaster.internal/ubuntu noble/universe s390x libmunge2 s390x 0.5.15-4 [15.6 kB] Get:119 http://ftpmaster.internal/ubuntu noble/main s390x libpciaccess0 s390x 0.17-3 [18.5 kB] Get:120 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libxnvctrl0 s390x 510.47.03-0ubuntu4 [12.7 kB] Get:121 http://ftpmaster.internal/ubuntu noble/universe s390x ocl-icd-libopencl1 s390x 2.3.2-1 [39.1 kB] Get:122 http://ftpmaster.internal/ubuntu noble/universe s390x libhwloc-plugins s390x 2.10.0-1 [16.1 kB] Get:123 http://ftpmaster.internal/ubuntu noble/universe s390x libpmix2t64 s390x 5.0.1-4.1 [727 kB] Get:124 http://ftpmaster.internal/ubuntu noble/universe s390x libopenmpi3t64 s390x 4.1.6-7ubuntu1 [2437 kB] Get:125 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x fftw2 s390x 2.1.5-6build2 [227 kB] Get:126 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x fftw-dev s390x 2.1.5-6build2 [267 kB] Get:127 http://ftpmaster.internal/ubuntu noble-proposed/main s390x fontconfig s390x 2.15.0-1.1ubuntu2 [191 kB] Get:128 http://ftpmaster.internal/ubuntu noble/main s390x fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] Get:129 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x fonts-lyx all 2.4.0~RC3-1build3 [171 kB] Get:130 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x hdf5-helpers s390x 1.10.10+repack-3.1ubuntu4 [15.8 kB] Get:131 http://ftpmaster.internal/ubuntu noble/main s390x libonig5 s390x 6.9.9-1 [186 kB] Get:132 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libjq1 s390x 1.7.1-3build1 [168 kB] Get:133 http://ftpmaster.internal/ubuntu noble-proposed/main s390x jq s390x 1.7.1-3build1 [66.5 kB] Get:134 http://ftpmaster.internal/ubuntu noble/universe s390x libaec0 s390x 1.1.2-1 [25.7 kB] Get:135 http://ftpmaster.internal/ubuntu noble/universe s390x libann-cctbx0 s390x 1.1.2+doc-9 [31.9 kB] Get:136 http://ftpmaster.internal/ubuntu noble/universe s390x libann-cctbx-dev s390x 1.1.2+doc-9 [44.8 kB] Get:137 http://ftpmaster.internal/ubuntu noble/universe s390x libantlr3c-3.4-0 s390x 3.4+dfsg-4build1 [42.5 kB] Get:138 http://ftpmaster.internal/ubuntu noble/universe s390x libantlr3c-dev s390x 3.4+dfsg-4build1 [123 kB] Get:139 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libatk1.0-0t64 s390x 2.52.0-1 [56.3 kB] Get:140 http://ftpmaster.internal/ubuntu noble/main s390x libxi6 s390x 2:1.8.1-1 [35.7 kB] Get:141 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libatspi2.0-0t64 s390x 2.52.0-1 [81.1 kB] Get:142 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libatk-bridge2.0-0t64 s390x 2.52.0-1 [66.9 kB] Get:143 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libavahi-common-data s390x 0.8-13ubuntu5 [29.6 kB] Get:144 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libavahi-common3 s390x 0.8-13ubuntu5 [24.1 kB] Get:145 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libavahi-client3 s390x 0.8-13ubuntu5 [27.2 kB] Get:146 http://ftpmaster.internal/ubuntu noble/main s390x libblas3 s390x 3.12.0-3 [245 kB] Get:147 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libboost1.83-dev s390x 1.83.0-2.1ubuntu2 [10.7 MB] Get:148 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libboost-atomic1.83.0 s390x 1.83.0-2.1ubuntu2 [239 kB] Get:149 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libboost-atomic1.83-dev s390x 1.83.0-2.1ubuntu2 [235 kB] Get:150 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libboost-chrono1.83.0t64 s390x 1.83.0-2.1ubuntu2 [245 kB] Get:151 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libboost-chrono1.83-dev s390x 1.83.0-2.1ubuntu2 [247 kB] Get:152 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libboost-date-time1.83.0 s390x 1.83.0-2.1ubuntu2 [236 kB] Get:153 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libboost-serialization1.83.0 s390x 1.83.0-2.1ubuntu2 [350 kB] Get:154 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libboost-serialization1.83-dev s390x 1.83.0-2.1ubuntu2 [408 kB] Get:155 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libboost-date-time1.83-dev s390x 1.83.0-2.1ubuntu2 [239 kB] Get:156 http://ftpmaster.internal/ubuntu noble/main s390x libboost-dev s390x 1.83.0.1ubuntu2 [4310 B] Get:157 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libboost-python1.83.0 s390x 1.83.0-2.1ubuntu2 [314 kB] Get:158 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libboost-numpy1.83.0 s390x 1.83.0-2.1ubuntu2 [243 kB] Get:159 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libboost-numpy1.83-dev s390x 1.83.0-2.1ubuntu2 [248 kB] Get:160 http://ftpmaster.internal/ubuntu noble/universe s390x libboost-numpy-dev s390x 1.83.0.1ubuntu2 [4098 B] Get:161 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpython3.12t64 s390x 3.12.2-4build4 [2529 kB] Get:162 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libexpat1-dev s390x 2.6.1-2build1 [149 kB] Get:163 http://ftpmaster.internal/ubuntu noble-proposed/main s390x zlib1g-dev s390x 1:1.3.dfsg-3.1ubuntu2 [904 kB] Get:164 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpython3.12-dev s390x 3.12.2-4build4 [5852 kB] Get:165 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpython3-dev s390x 3.12.2-0ubuntu2 [10.1 kB] Get:166 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3.12-dev s390x 3.12.2-4build4 [498 kB] Get:167 http://ftpmaster.internal/ubuntu noble/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] Get:168 http://ftpmaster.internal/ubuntu noble/main s390x libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] Get:169 http://ftpmaster.internal/ubuntu noble/main s390x libjs-sphinxdoc all 7.2.6-6 [149 kB] Get:170 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-dev s390x 3.12.2-0ubuntu2 [26.7 kB] Get:171 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libboost-python1.83-dev s390x 1.83.0-2.1ubuntu2 [337 kB] Get:172 http://ftpmaster.internal/ubuntu noble/universe s390x libboost-python-dev s390x 1.83.0.1ubuntu2 [4344 B] Get:173 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libboost-system1.83.0 s390x 1.83.0-2.1ubuntu2 [236 kB] Get:174 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libboost-system1.83-dev s390x 1.83.0-2.1ubuntu2 [231 kB] Get:175 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libboost-thread1.83.0 s390x 1.83.0-2.1ubuntu2 [278 kB] Get:176 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libboost-thread1.83-dev s390x 1.83.0-2.1ubuntu2 [283 kB] Get:177 http://ftpmaster.internal/ubuntu noble/main s390x libboost-thread-dev s390x 1.83.0.1ubuntu2 [4086 B] Get:178 http://ftpmaster.internal/ubuntu noble/main s390x libpixman-1-0 s390x 0.42.2-1 [173 kB] Get:179 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-render0 s390x 1.15-1 [17.0 kB] Get:180 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-shm0 s390x 1.15-1 [5782 B] Get:181 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcairo2 s390x 1.18.0-3 [589 kB] Get:182 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcairo-gobject2 s390x 1.18.0-3 [127 kB] Get:183 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsasl2-modules-db s390x 2.1.28+dfsg1-5ubuntu2 [21.2 kB] Get:184 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsasl2-2 s390x 2.1.28+dfsg1-5ubuntu2 [57.8 kB] Get:185 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libldap2 s390x 2.6.7+dfsg-1~exp1ubuntu7 [202 kB] Get:186 http://ftpmaster.internal/ubuntu noble-proposed/main s390x librtmp1 s390x 2.4+20151223.gitfa8646d.1-2build7 [58.4 kB] Get:187 http://ftpmaster.internal/ubuntu noble/main s390x libssh-4 s390x 0.10.6-2build1 [189 kB] Get:188 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcurl4t64 s390x 8.5.0-2ubuntu9 [363 kB] Get:189 http://ftpmaster.internal/ubuntu noble/universe s390x libsz2 s390x 1.1.2-1 [5346 B] Get:190 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libhdf5-103-1t64 s390x 1.10.10+repack-3.1ubuntu4 [1436 kB] Get:191 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libcbf1t64 s390x 0.9.7+dfsg1-3.1build2 [388 kB] Get:192 http://ftpmaster.internal/ubuntu noble/universe s390x libccp4-data all 8.0.0-2 [65.1 kB] Get:193 http://ftpmaster.internal/ubuntu noble/universe s390x libccp4c0 s390x 8.0.0-2 [92.9 kB] Get:194 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgfortran5 s390x 14-20240330-1ubuntu2 [598 kB] Get:195 http://ftpmaster.internal/ubuntu noble/universe s390x libmmdb2-0 s390x 2.0.22-1 [351 kB] Get:196 http://ftpmaster.internal/ubuntu noble/universe s390x libccp4f0 s390x 8.0.0-2 [221 kB] Get:197 http://ftpmaster.internal/ubuntu noble/universe s390x libccp4-dev s390x 8.0.0-2 [42.3 kB] Get:198 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x sfftw2 s390x 2.1.5-6build2 [214 kB] Get:199 http://ftpmaster.internal/ubuntu noble/universe s390x libclipper2 s390x 2.1.20201109-2 [1151 kB] Get:200 http://ftpmaster.internal/ubuntu noble/universe s390x libmmdb2-dev s390x 2.0.22-1 [93.5 kB] Get:201 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x sfftw-dev s390x 2.1.5-6build2 [254 kB] Get:202 http://ftpmaster.internal/ubuntu noble/universe s390x libclipper-dev s390x 2.1.20201109-2 [77.0 kB] Get:203 http://ftpmaster.internal/ubuntu noble/main s390x liblcms2-2 s390x 2.14-2 [155 kB] Get:204 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcolord2 s390x 1.4.7-1build2 [151 kB] Get:205 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcups2t64 s390x 2.4.7-1.2ubuntu3 [282 kB] Get:206 http://ftpmaster.internal/ubuntu noble/main s390x libcurl3-gnutls s390x 8.5.0-2ubuntu2 [356 kB] Get:207 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcurl4-openssl-dev s390x 8.5.0-2ubuntu9 [473 kB] Get:208 http://ftpmaster.internal/ubuntu noble/main s390x libdatrie1 s390x 0.2.13-3 [22.6 kB] Get:209 http://ftpmaster.internal/ubuntu noble/main s390x libdeflate-dev s390x 1.19-1 [52.4 kB] Get:210 http://ftpmaster.internal/ubuntu noble/universe s390x libdouble-conversion3 s390x 3.3.0-1 [39.6 kB] Get:211 http://ftpmaster.internal/ubuntu noble/main s390x libdrm-amdgpu1 s390x 2.4.120-2 [21.1 kB] Get:212 http://ftpmaster.internal/ubuntu noble/main s390x libdrm-nouveau2 s390x 2.4.120-2 [18.5 kB] Get:213 http://ftpmaster.internal/ubuntu noble/main s390x libdrm-radeon1 s390x 2.4.120-2 [22.7 kB] Get:214 http://ftpmaster.internal/ubuntu noble/main s390x libwayland-server0 s390x 1.22.0-2.1 [34.9 kB] Get:215 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-randr0 s390x 1.15-1 [19.0 kB] Get:216 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgbm1 s390x 24.0.3-1ubuntu4 [44.5 kB] Get:217 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libglapi-mesa s390x 24.0.3-1ubuntu4 [69.2 kB] Get:218 http://ftpmaster.internal/ubuntu noble/main s390x libwayland-client0 s390x 1.22.0-2.1 [26.1 kB] Get:219 http://ftpmaster.internal/ubuntu noble/main s390x libx11-xcb1 s390x 2:1.8.7-1 [7778 B] Get:220 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-dri2-0 s390x 1.15-1 [7426 B] Get:221 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-dri3-0 s390x 1.15-1 [7270 B] Get:222 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-present0 s390x 1.15-1 [5752 B] Get:223 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-sync1 s390x 1.15-1 [9392 B] Get:224 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-xfixes0 s390x 1.15-1 [10.5 kB] Get:225 http://ftpmaster.internal/ubuntu noble/main s390x libxshmfence1 s390x 1.3-1build4 [5334 B] Get:226 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libegl-mesa0 s390x 24.0.3-1ubuntu4 [123 kB] Get:227 http://ftpmaster.internal/ubuntu noble/main s390x libepoxy0 s390x 1.5.10-1 [232 kB] Get:228 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libfftw3-double3 s390x 3.3.10-1ubuntu3 [512 kB] Get:229 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libfftw3-long3 s390x 3.3.10-1ubuntu3 [528 kB] Get:230 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libfftw3-single3 s390x 3.3.10-1ubuntu3 [481 kB] Get:231 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libfftw3-bin s390x 3.3.10-1ubuntu3 [37.5 kB] Get:232 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libfftw3-dev s390x 3.3.10-1ubuntu3 [1325 kB] Get:233 http://ftpmaster.internal/ubuntu noble/main s390x libglvnd0 s390x 1.7.0-1 [106 kB] Get:234 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-glx0 s390x 1.15-1 [25.8 kB] Get:235 http://ftpmaster.internal/ubuntu noble/main s390x libxfixes3 s390x 1:6.0.0-2 [10.6 kB] Get:236 http://ftpmaster.internal/ubuntu noble/main s390x libxxf86vm1 s390x 1:1.1.4-1build3 [9900 B] Get:237 http://ftpmaster.internal/ubuntu noble/main s390x libvulkan1 s390x 1.3.275.0-1 [155 kB] Get:238 http://ftpmaster.internal/ubuntu noble/main s390x libllvm17t64 s390x 1:17.0.6-9build2 [31.2 MB] Get:239 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsensors-config all 1:3.6.0-9build1 [5546 B] Get:240 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsensors5 s390x 1:3.6.0-9build1 [27.3 kB] Get:241 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgl1-mesa-dri s390x 24.0.3-1ubuntu4 [7186 kB] Get:242 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libglx-mesa0 s390x 24.0.3-1ubuntu4 [182 kB] Get:243 http://ftpmaster.internal/ubuntu noble/main s390x libglx0 s390x 1.7.0-1 [31.4 kB] Get:244 http://ftpmaster.internal/ubuntu noble/main s390x libgl1 s390x 1.7.0-1 [137 kB] Get:245 http://ftpmaster.internal/ubuntu noble/main s390x xorg-sgml-doctools all 1:1.11-1.1 [10.9 kB] Get:246 http://ftpmaster.internal/ubuntu noble/main s390x x11proto-dev all 2023.2-1 [602 kB] Get:247 http://ftpmaster.internal/ubuntu noble/main s390x libxau-dev s390x 1:1.0.9-1build5 [9702 B] Get:248 http://ftpmaster.internal/ubuntu noble/main s390x libxdmcp-dev s390x 1:1.1.3-0ubuntu5 [26.5 kB] Get:249 http://ftpmaster.internal/ubuntu noble/main s390x xtrans-dev all 1.4.0-1 [68.9 kB] Get:250 http://ftpmaster.internal/ubuntu noble/main s390x libpthread-stubs0-dev s390x 0.4-1build2 [5508 B] Get:251 http://ftpmaster.internal/ubuntu noble/main s390x libxcb1-dev s390x 1.15-1 [86.5 kB] Get:252 http://ftpmaster.internal/ubuntu noble/main s390x libx11-dev s390x 2:1.8.7-1 [758 kB] Get:253 http://ftpmaster.internal/ubuntu noble/main s390x libglx-dev s390x 1.7.0-1 [14.2 kB] Get:254 http://ftpmaster.internal/ubuntu noble/main s390x libgl-dev s390x 1.7.0-1 [102 kB] Get:255 http://ftpmaster.internal/ubuntu noble/universe s390x libglew2.2 s390x 2.2.0-4 [202 kB] Get:256 http://ftpmaster.internal/ubuntu noble/main s390x libopengl0 s390x 1.7.0-1 [45.9 kB] Get:257 http://ftpmaster.internal/ubuntu noble/main s390x libglu1-mesa s390x 9.0.2-1.1 [145 kB] Get:258 http://ftpmaster.internal/ubuntu noble/main s390x libopengl-dev s390x 1.7.0-1 [3438 B] Get:259 http://ftpmaster.internal/ubuntu noble/main s390x libglu1-mesa-dev s390x 9.0.2-1.1 [228 kB] Get:260 http://ftpmaster.internal/ubuntu noble/main s390x libgraphite2-3 s390x 1.3.14-2 [90.4 kB] Get:261 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libharfbuzz0b s390x 8.3.0-2build2 [515 kB] Get:262 http://ftpmaster.internal/ubuntu noble/main s390x libthai-data all 0.1.29-2 [158 kB] Get:263 http://ftpmaster.internal/ubuntu noble/main s390x libthai0 s390x 0.1.29-2 [20.6 kB] Get:264 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpango-1.0-0 s390x 1.52.1+ds-1build1 [243 kB] Get:265 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpangoft2-1.0-0 s390x 1.52.1+ds-1build1 [44.0 kB] Get:266 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpangocairo-1.0-0 s390x 1.52.1+ds-1build1 [28.8 kB] Get:267 http://ftpmaster.internal/ubuntu noble/main s390x libwayland-cursor0 s390x 1.22.0-2.1 [11.1 kB] Get:268 http://ftpmaster.internal/ubuntu noble/main s390x libwayland-egl1 s390x 1.22.0-2.1 [5452 B] Get:269 http://ftpmaster.internal/ubuntu noble/main s390x libxcomposite1 s390x 1:0.4.5-1build2 [6952 B] Get:270 http://ftpmaster.internal/ubuntu noble/main s390x libxcursor1 s390x 1:1.2.1-1 [22.2 kB] Get:271 http://ftpmaster.internal/ubuntu noble/main s390x libxdamage1 s390x 1:1.1.6-1 [5810 B] Get:272 http://ftpmaster.internal/ubuntu noble/main s390x libxinerama1 s390x 2:1.1.4-3 [7110 B] Get:273 http://ftpmaster.internal/ubuntu noble/main s390x libxkbcommon0 s390x 1.6.0-1 [129 kB] Get:274 http://ftpmaster.internal/ubuntu noble/main s390x libxrandr2 s390x 2:1.5.2-2 [19.5 kB] Get:275 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgtk-3-common all 3.24.41-1.1ubuntu4 [1202 kB] Get:276 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgtk-3-0t64 s390x 3.24.41-1.1ubuntu4 [2951 kB] Get:277 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgudev-1.0-0 s390x 1:238-5ubuntu1 [15.9 kB] Get:278 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libhdf5-cpp-103-1t64 s390x 1.10.10+repack-3.1ubuntu4 [123 kB] Get:279 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libhdf5-fortran-102t64 s390x 1.10.10+repack-3.1ubuntu4 [92.7 kB] Get:280 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libhdf5-hl-100t64 s390x 1.10.10+repack-3.1ubuntu4 [58.0 kB] Get:281 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libhdf5-hl-fortran-100t64 s390x 1.10.10+repack-3.1ubuntu4 [32.3 kB] Get:282 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libhdf5-hl-cpp-100t64 s390x 1.10.10+repack-3.1ubuntu4 [11.1 kB] Get:283 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-turbo8-dev s390x 2.1.5-2ubuntu1 [264 kB] Get:284 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg8-dev s390x 8c-2ubuntu11 [1484 B] Get:285 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-dev s390x 8c-2ubuntu11 [1484 B] Get:286 http://ftpmaster.internal/ubuntu noble/universe s390x libaec-dev s390x 1.1.2-1 [23.1 kB] Get:287 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libssl-dev s390x 3.0.13-0ubuntu3 [2131 kB] Get:288 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libhdf5-dev s390x 1.10.10+repack-3.1ubuntu4 [2908 kB] Get:289 http://ftpmaster.internal/ubuntu noble/main s390x libice6 s390x 2:1.0.10-1build2 [40.8 kB] Get:290 http://ftpmaster.internal/ubuntu noble/main s390x libimagequant0 s390x 2.18.0-1 [42.9 kB] Get:291 http://ftpmaster.internal/ubuntu noble/main s390x libevdev2 s390x 1.13.1+dfsg-1 [35.6 kB] Get:292 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libwacom-common all 2.10.0-2 [63.4 kB] Get:293 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libwacom9 s390x 2.10.0-2 [24.2 kB] Get:294 http://ftpmaster.internal/ubuntu noble/main s390x libinput-bin s390x 1.25.0-1ubuntu1 [22.2 kB] Get:295 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libmtdev1t64 s390x 1.1.6-1.1build1 [15.7 kB] Get:296 http://ftpmaster.internal/ubuntu noble/main s390x libinput10 s390x 1.25.0-1ubuntu1 [136 kB] Get:297 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] Get:298 http://ftpmaster.internal/ubuntu noble/main s390x liblapack3 s390x 3.12.0-3 [2979 kB] Get:299 http://ftpmaster.internal/ubuntu noble/universe s390x liblbfgsb0 s390x 3.0+dfsg.4-1 [28.4 kB] Get:300 http://ftpmaster.internal/ubuntu noble/universe s390x liblzf1 s390x 3.6-4 [7020 B] Get:301 http://ftpmaster.internal/ubuntu noble/universe s390x libmd4c0 s390x 0.4.8-1 [43.6 kB] Get:302 http://ftpmaster.internal/ubuntu noble/universe s390x libnetcdf19 s390x 1:4.9.2-3ubuntu1 [506 kB] Get:303 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libnotify4 s390x 0.8.3-1build2 [25.5 kB] Get:304 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-16-0 s390x 10.42-4ubuntu1 [229 kB] Get:305 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-32-0 s390x 10.42-4ubuntu1 [217 kB] Get:306 http://ftpmaster.internal/ubuntu noble/main s390x libpkgconf3 s390x 1.8.1-2 [30.4 kB] Get:307 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpython3-all-dev s390x 3.12.2-0ubuntu2 [912 B] Get:308 http://ftpmaster.internal/ubuntu noble/universe s390x libqhull-r8.0 s390x 2020.2-6 [181 kB] Get:309 http://ftpmaster.internal/ubuntu noble/universe s390x libqt5core5t64 s390x 5.15.12+dfsg-3ubuntu6 [2263 kB] Get:310 http://ftpmaster.internal/ubuntu noble/universe s390x libqt5dbus5t64 s390x 5.15.12+dfsg-3ubuntu6 [244 kB] Get:311 http://ftpmaster.internal/ubuntu noble/main s390x libegl1 s390x 1.7.0-1 [30.9 kB] Get:312 http://ftpmaster.internal/ubuntu noble/universe s390x libqt5network5t64 s390x 5.15.12+dfsg-3ubuntu6 [798 kB] Get:313 http://ftpmaster.internal/ubuntu noble/main s390x libsm6 s390x 2:1.2.3-1build2 [16.9 kB] Get:314 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-icccm4 s390x 0.4.1-1.1build2 [11.5 kB] Get:315 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-util1 s390x 0.4.0-1build2 [11.2 kB] Get:316 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-image0 s390x 0.4.0-2 [11.8 kB] Get:317 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-keysyms1 s390x 0.4.0-1build3 [8780 B] Get:318 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-render-util0 s390x 0.3.9-1build3 [10.1 kB] Get:319 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-shape0 s390x 1.15-1 [6146 B] Get:320 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-xinerama0 s390x 1.15-1 [5382 B] Get:321 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-xinput0 s390x 1.15-1 [34.6 kB] Get:322 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-xkb1 s390x 1.15-1 [32.3 kB] Get:323 http://ftpmaster.internal/ubuntu noble/main s390x libxkbcommon-x11-0 s390x 1.6.0-1 [14.8 kB] Get:324 http://ftpmaster.internal/ubuntu noble/universe s390x libqt5gui5t64 s390x 5.15.12+dfsg-3ubuntu6 [4203 kB] Get:325 http://ftpmaster.internal/ubuntu noble/universe s390x libqt5widgets5t64 s390x 5.15.12+dfsg-3ubuntu6 [2754 kB] Get:326 http://ftpmaster.internal/ubuntu noble/universe s390x libqt5xml5t64 s390x 5.15.12+dfsg-3ubuntu6 [132 kB] Get:327 http://ftpmaster.internal/ubuntu noble/universe s390x libqt5designer5 s390x 5.15.12-2build2 [2912 kB] Get:328 http://ftpmaster.internal/ubuntu noble/universe s390x libqt5sql5t64 s390x 5.15.12+dfsg-3ubuntu6 [131 kB] Get:329 http://ftpmaster.internal/ubuntu noble/universe s390x libqt5help5 s390x 5.15.12-2build2 [174 kB] Get:330 http://ftpmaster.internal/ubuntu noble/universe s390x libqt5opengl5t64 s390x 5.15.12+dfsg-3ubuntu6 [157 kB] Get:331 http://ftpmaster.internal/ubuntu noble/universe s390x libqt5printsupport5t64 s390x 5.15.12+dfsg-3ubuntu6 [220 kB] Get:332 http://ftpmaster.internal/ubuntu noble/universe s390x libqt5test5t64 s390x 5.15.12+dfsg-3ubuntu6 [156 kB] Get:333 http://ftpmaster.internal/ubuntu noble/main s390x libraqm0 s390x 0.10.1-1 [14.4 kB] Get:334 http://ftpmaster.internal/ubuntu noble/main s390x libsharpyuv-dev s390x 1.3.2-0.4build2 [14.6 kB] Get:335 http://ftpmaster.internal/ubuntu noble/universe s390x libssm2 s390x 1.4.0-2 [77.0 kB] Get:336 http://ftpmaster.internal/ubuntu noble/universe s390x libssm-dev s390x 1.4.0-2 [14.0 kB] Get:337 http://ftpmaster.internal/ubuntu noble/main s390x libjbig-dev s390x 2.1-6.1ubuntu1 [28.3 kB] Get:338 http://ftpmaster.internal/ubuntu noble-proposed/main s390x liblzma-dev s390x 5.6.1+really5.4.5-1build1 [184 kB] Get:339 http://ftpmaster.internal/ubuntu noble/main s390x libzstd-dev s390x 1.5.5+dfsg2-2 [408 kB] Get:340 http://ftpmaster.internal/ubuntu noble/main s390x libwebpdemux2 s390x 1.3.2-0.4build2 [12.5 kB] Get:341 http://ftpmaster.internal/ubuntu noble/main s390x libwebpmux3 s390x 1.3.2-0.4build2 [25.4 kB] Get:342 http://ftpmaster.internal/ubuntu noble/main s390x libwebpdecoder3 s390x 1.3.2-0.4build2 [90.9 kB] Get:343 http://ftpmaster.internal/ubuntu noble/main s390x libwebp-dev s390x 1.3.2-0.4build2 [335 kB] Get:344 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libtiffxx6 s390x 4.5.1+git230720-4ubuntu2 [5882 B] Get:345 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libtiff-dev s390x 4.5.1+git230720-4ubuntu2 [358 kB] Get:346 http://ftpmaster.internal/ubuntu noble/universe s390x libwxbase3.2-1t64 s390x 3.2.4+dfsg-4 [925 kB] Get:347 http://ftpmaster.internal/ubuntu noble/main s390x libxtst6 s390x 2:1.2.3-1.1 [13.4 kB] Get:348 http://ftpmaster.internal/ubuntu noble/universe s390x libwxgtk3.2-1t64 s390x 3.2.4+dfsg-4 [4739 kB] Get:349 http://ftpmaster.internal/ubuntu noble/universe s390x libwxgtk-gl3.2-1t64 s390x 3.2.4+dfsg-4 [53.5 kB] Get:350 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libxslt1.1 s390x 1.1.39-0exp1build1 [170 kB] Get:351 http://ftpmaster.internal/ubuntu noble/main s390x pkgconf-bin s390x 1.8.1-2 [20.8 kB] Get:352 http://ftpmaster.internal/ubuntu noble/main s390x pkgconf s390x 1.8.1-2 [16.7 kB] Get:353 http://ftpmaster.internal/ubuntu noble/main s390x pkg-config s390x 1.8.1-2 [7170 B] Get:354 http://ftpmaster.internal/ubuntu noble/universe s390x pybind11-dev all 2.11.1-2 [159 kB] Get:355 http://ftpmaster.internal/ubuntu noble/universe s390x pymol-data all 2.5.0+dfsg-1build5 [1353 kB] Get:356 http://ftpmaster.internal/ubuntu noble/universe s390x python-matplotlib-data all 3.6.3-1ubuntu3 [2936 kB] Get:357 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-all s390x 3.12.2-0ubuntu2 [890 B] Get:358 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-all-dev s390x 3.12.2-0ubuntu2 [908 B] Get:359 http://ftpmaster.internal/ubuntu noble/main s390x python3-appdirs all 1.4.4-4 [10.9 kB] Get:360 http://ftpmaster.internal/ubuntu noble/main s390x python3-attr all 23.2.0-2 [48.6 kB] Get:361 http://ftpmaster.internal/ubuntu noble/main s390x python3-numpy s390x 1:1.24.2-3ubuntu1 [4155 kB] Get:362 http://ftpmaster.internal/ubuntu noble/main s390x python3-chardet all 5.2.0+dfsg-1 [117 kB] Get:363 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-tk s390x 3.12.2-3ubuntu4 [104 kB] Get:364 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pil.imagetk s390x 10.2.0-1 [9578 B] Get:365 http://ftpmaster.internal/ubuntu noble/main s390x libopenjp2-7 s390x 2.5.0-2build2 [192 kB] Get:366 http://ftpmaster.internal/ubuntu noble/main s390x python3-pil s390x 10.2.0-1 [519 kB] Get:367 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-cairo s390x 1.25.1-2build2 [120 kB] Get:368 http://ftpmaster.internal/ubuntu noble/universe s390x python3-freetype all 2.4.0-1 [83.1 kB] Get:369 http://ftpmaster.internal/ubuntu noble/universe s390x python3-rlpycairo all 0.3.0-3 [9130 B] Get:370 http://ftpmaster.internal/ubuntu noble/universe s390x python3-reportlab all 4.1.0-4 [1105 kB] Get:371 http://ftpmaster.internal/ubuntu noble/main s390x xml-core all 0.19 [20.3 kB] Get:372 http://ftpmaster.internal/ubuntu noble/universe s390x w3c-sgml-lib all 1.3-3 [280 kB] Get:373 http://ftpmaster.internal/ubuntu noble/universe s390x python3-biopython s390x 1.81+dfsg-3 [2234 kB] Get:374 http://ftpmaster.internal/ubuntu noble/universe s390x python3-brotli s390x 1.1.0-2build1 [376 kB] Get:375 http://ftpmaster.internal/ubuntu noble/main s390x python3-certifi all 2023.11.17-1 [165 kB] Get:376 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x python3-contourpy s390x 1.0.7-2build1 [182 kB] Get:377 http://ftpmaster.internal/ubuntu noble/universe s390x python3-cycler all 0.11.0-2 [8202 B] Get:378 http://ftpmaster.internal/ubuntu noble/main s390x python3-six all 1.16.0-4 [12.4 kB] Get:379 http://ftpmaster.internal/ubuntu noble/main s390x python3-dateutil all 2.8.2-3 [79.2 kB] Get:380 http://ftpmaster.internal/ubuntu noble/main s390x python3-decorator all 5.1.1-5 [10.1 kB] Get:381 http://ftpmaster.internal/ubuntu noble/universe s390x python3-scipy s390x 1.11.4-6 [20.1 MB] Get:382 http://ftpmaster.internal/ubuntu noble/universe s390x python3-ufolib2 all 0.16.0+dfsg1-1 [33.5 kB] Get:383 http://ftpmaster.internal/ubuntu noble/universe s390x python3-mpmath all 1.2.1-3 [421 kB] Get:384 http://ftpmaster.internal/ubuntu noble/universe s390x python3-sympy all 1.12-7 [3966 kB] Get:385 http://ftpmaster.internal/ubuntu noble/main s390x python3-tz all 2024.1-2 [31.4 kB] Get:386 http://ftpmaster.internal/ubuntu noble/universe s390x python3-fs all 2.4.16-3 [91.1 kB] Get:387 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-lxml s390x 5.1.0-1build2 [1386 kB] Get:388 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x python3-lz4 s390x 4.0.2+dfsg-1build4 [26.4 kB] Get:389 http://ftpmaster.internal/ubuntu noble/universe s390x unicode-data all 15.1.0-1 [8878 kB] Get:390 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x python3-fonttools s390x 4.46.0-1build2 [1453 kB] Get:391 http://ftpmaster.internal/ubuntu noble/universe s390x python3-h5py-serial s390x 3.10.0-1ubuntu2 [920 kB] Get:392 http://ftpmaster.internal/ubuntu noble/universe s390x python3-h5py all 3.10.0-1ubuntu2 [7980 B] Get:393 http://ftpmaster.internal/ubuntu noble/main s390x python3-idna all 3.6-2 [46.0 kB] Get:394 http://ftpmaster.internal/ubuntu noble/universe s390x python3-iniconfig all 1.1.1-2 [6024 B] Get:395 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x python3-kiwisolver s390x 1.4.4-2build1 [53.4 kB] Get:396 http://ftpmaster.internal/ubuntu noble/main s390x python3-pyparsing all 3.1.1-1 [86.2 kB] Get:397 http://ftpmaster.internal/ubuntu noble/main s390x python3-packaging all 23.2-1 [40.6 kB] Get:398 http://ftpmaster.internal/ubuntu noble/universe s390x python3-matplotlib s390x 3.6.3-1ubuntu3 [7346 kB] Get:399 http://ftpmaster.internal/ubuntu noble/main s390x sphinx-rtd-theme-common all 2.0.0+dfsg-1 [1012 kB] Get:400 http://ftpmaster.internal/ubuntu noble/universe s390x python3-mrcfile all 1.4.3-3 [110 kB] Get:401 http://ftpmaster.internal/ubuntu noble/main s390x python3-msgpack s390x 1.0.3-3build1 [101 kB] Get:402 http://ftpmaster.internal/ubuntu noble/main s390x python3-pint all 0.19.2-1 [170 kB] Get:403 http://ftpmaster.internal/ubuntu noble/universe s390x python3-nxmx all 0.0.3-2 [15.3 kB] Get:404 http://ftpmaster.internal/ubuntu noble/universe s390x python3-opengl all 3.1.7+dfsg-1 [612 kB] Get:405 http://ftpmaster.internal/ubuntu noble/universe s390x python3-orderedset s390x 2.0.3+ds1-2 [102 kB] Get:406 http://ftpmaster.internal/ubuntu noble/universe s390x python3-wheel all 0.42.0-2 [53.1 kB] Get:407 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pip all 24.0+dfsg-1ubuntu1 [1316 kB] Get:408 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pluggy all 1.4.0-1 [20.4 kB] Get:409 http://ftpmaster.internal/ubuntu noble/universe s390x python3-procrunner all 2.3.3-1 [11.9 kB] Get:410 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-psutil s390x 5.9.8-2build1 [195 kB] Get:411 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x python3-pycbf s390x 0.9.7+dfsg1-3.1build2 [150 kB] Get:412 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x python3-pyqt5.sip s390x 12.13.0-1build3 [64.9 kB] Get:413 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pyqt5 s390x 5.15.10+dfsg-1build4 [2905 kB] Get:414 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pyqt5.qtopengl s390x 5.15.10+dfsg-1build4 [140 kB] Get:415 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pymol s390x 2.5.0+dfsg-1build5 [4159 kB] Get:416 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x python3-pytest all 8.0.2-1 [248 kB] Get:417 http://ftpmaster.internal/ubuntu noble/main s390x python3-urllib3 all 2.0.7-1 [113 kB] Get:418 http://ftpmaster.internal/ubuntu noble/main s390x python3-requests all 2.31.0+dfsg-1ubuntu1 [50.7 kB] Get:419 http://ftpmaster.internal/ubuntu noble/universe s390x python3-tqdm all 4.66.2-2 [91.1 kB] Get:420 http://ftpmaster.internal/ubuntu noble/universe s390x python3-wxgtk4.0 s390x 4.2.1+dfsg-3build1 [7705 kB] Get:421 http://ftpmaster.internal/ubuntu noble/universe s390x scons all 4.5.2+dfsg-1 [577 kB] Get:422 http://ftpmaster.internal/ubuntu noble/main s390x dh-exec s390x 0.29 [25.8 kB] Get:423 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libcbf-dev s390x 0.9.7+dfsg1-3.1build2 [498 kB] Get:424 http://ftpmaster.internal/ubuntu noble/universe s390x libeigen3-dev all 3.4.0-4 [1056 kB] Get:425 http://ftpmaster.internal/ubuntu noble/main s390x liblz4-dev s390x 1.9.4-1 [85.9 kB] Preconfiguring packages ... Fetched 258 MB in 14s (19.0 MB/s) Selecting previously unselected package libpython3.12-minimal:s390x. (Reading database ... 15548 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.2-4build4_s390x.deb ... Unpacking libpython3.12-minimal:s390x (3.12.2-4build4) ... Selecting previously unselected package libexpat1:s390x. Preparing to unpack .../libexpat1_2.6.1-2build1_s390x.deb ... Unpacking libexpat1:s390x (2.6.1-2build1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.2-4build4_s390x.deb ... Unpacking python3.12-minimal (3.12.2-4build4) ... Setting up libpython3.12-minimal:s390x (3.12.2-4build4) ... Setting up libexpat1:s390x (2.6.1-2build1) ... Setting up python3.12-minimal (3.12.2-4build4) ... Selecting previously unselected package python3-minimal. (Reading database ... 15866 files and directories currently installed.) 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Setting up libboost-chrono1.83.0t64:s390x (1.83.0-2.1ubuntu2) ... Setting up librtmp1:s390x (2.4+20151223.gitfa8646d.1-2build7) ... Setting up libavahi-common-data:s390x (0.8-13ubuntu5) ... Setting up libdbus-1-3:s390x (1.14.10-4ubuntu3) ... Setting up liblzf1:s390x (3.6-4) ... Setting up xfonts-encodings (1:1.0.5-0ubuntu2) ... Setting up libfribidi0:s390x (1.0.13-3) ... Setting up libimagequant0:s390x (2.18.0-1) ... Setting up pymol-data (2.5.0+dfsg-1build5) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libssl-dev:s390x (3.0.13-0ubuntu3) ... Setting up libhwloc15:s390x (2.10.0-1) ... Setting up libevent-core-2.1-7:s390x (2.1.12-stable-9build1) ... Setting up libmmdb2-dev (2.0.22-1) ... Setting up libtcl8.6:s390x (8.6.14+dfsg-1build1) ... Setting up autopoint (0.21-14ubuntu1) ... Setting up libboost-numpy1.83-dev (1.83.0-2.1ubuntu2) ... Setting up liblz4-dev:s390x (1.9.4-1) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up libccp4c0:s390x (8.0.0-2) ... Setting up pkgconf-bin (1.8.1-2) ... Setting up libsensors5:s390x (1:3.6.0-9build1) ... Setting up libjpeg-turbo8:s390x (2.1.5-2ubuntu1) ... Setting up libfftw3-double3:s390x (3.3.10-1ubuntu3) ... Setting up libglapi-mesa:s390x (24.0.3-1ubuntu4) ... Setting up libsasl2-2:s390x (2.1.28+dfsg1-5ubuntu2) ... Setting up libssh-4:s390x (0.10.6-2build1) ... Setting up libgfortran5:s390x (14-20240330-1ubuntu2) ... Setting up libvulkan1:s390x (1.3.275.0-1) ... Setting up libboost-atomic1.83-dev:s390x (1.83.0-2.1ubuntu2) ... Setting up autoconf (2.71-3) ... Setting up libwebp7:s390x (1.3.2-0.4build2) ... Setting up liblzma-dev:s390x (5.6.1+really5.4.5-1build1) ... Setting up libicu74:s390x (74.2-1ubuntu1) ... Setting up zlib1g-dev:s390x (1:1.3.dfsg-3.1ubuntu2) ... Setting up dwz (0.15-1build5) ... Setting up libmtdev1t64:s390x (1.1.6-1.1build1) ... Setting up ocl-icd-libopencl1:s390x (2.3.2-1) ... Setting up libxshmfence1:s390x (1.3-1build4) ... Setting up at-spi2-common (2.52.0-1) ... Setting up dbus-session-bus-common (1.14.10-4ubuntu3) ... Setting up libuchardet0:s390x (0.0.8-1) ... Setting up libnl-3-200:s390x (3.7.0-0.3) ... Setting up debugedit (1:5.0-5build1) ... Setting up libmd4c0:s390x (0.4.8-1) ... Setting up libopenjp2-7:s390x (2.5.0-2build2) ... Setting up libsub-override-perl (0.10-1) ... Setting up libharfbuzz0b:s390x (8.3.0-2build2) ... Setting up libthai-data (0.1.29-2) ... Setting up xorg-sgml-doctools (1:1.11-1.1) ... Setting up netbase (6.4) ... Setting up sgml-base (1.31) ... Setting up libboost-dev:s390x (1.83.0.1ubuntu2) ... Setting up libglu1-mesa:s390x (9.0.2-1.1) ... Setting up libwayland-egl1:s390x (1.22.0-2.1) ... Setting up libboost-system1.83-dev:s390x (1.83.0-2.1ubuntu2) ... Setting up libopengl-dev:s390x (1.7.0-1) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up dbus-system-bus-common (1.14.10-4ubuntu3) ... Setting up libsharpyuv-dev:s390x (1.3.2-0.4build2) ... Setting up python-matplotlib-data (3.6.3-1ubuntu3) ... Setting up libwebpmux3:s390x (1.3.2-0.4build2) ... Setting up libbsd0:s390x (0.12.1-1build1) ... Setting up libdeflate-dev:s390x (1.19-1) ... Setting up libdrm-common (2.4.120-2) ... Setting up libevdev2:s390x (1.13.1+dfsg-1) ... Setting up libxml2:s390x (2.9.14+dfsg-1.3ubuntu3) ... Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... Setting up sphinx-rtd-theme-common (2.0.0+dfsg-1) ... Setting up libldap2:s390x (2.6.7+dfsg-1~exp1ubuntu7) ... Setting up dbus-bin (1.14.10-4ubuntu3) ... Setting up libonig5:s390x (6.9.9-1) ... Setting up libgudev-1.0-0:s390x (1:238-5ubuntu1) ... Setting up libsz2:s390x (1.1.2-1) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up libpopt0:s390x (1.19+dfsg-1) ... Setting up libann-cctbx-dev (1.1.2+doc-9) ... Setting up libevent-pthreads-2.1-7:s390x (2.1.12-stable-9build1) ... Setting up libccp4f0:s390x (8.0.0-2) ... Setting up libwacom-common (2.10.0-2) ... Setting up libxkbcommon0:s390x (1.6.0-1) ... Setting up libwayland-client0:s390x (1.22.0-2.1) ... Setting up libjpeg8:s390x (8c-2ubuntu11) ... Setting up automake (1:1.16.5-1.3ubuntu1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up x11proto-dev (2023.2-1) ... Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up libice6:s390x (2:1.0.10-1build2) ... Setting up libjpeg-turbo8-dev:s390x (2.1.5-2ubuntu1) ... Setting up libxdmcp6:s390x (1:1.1.3-0ubuntu5) ... Setting up liblapack3:s390x (3.12.0-3) ... update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode Setting up libxcb1:s390x (1.15-1) ... Setting up gettext (0.21-14ubuntu1) ... Setting up libxcb-xfixes0:s390x (1.15-1) ... Setting up libssm2:s390x (1.4.0-2) ... Setting up libatk1.0-0t64:s390x (2.52.0-1) ... Setting up libxau-dev:s390x (1:1.0.9-1build5) ... Setting up libboost-chrono1.83-dev:s390x (1.83.0-2.1ubuntu2) ... Setting up libpython3.12-stdlib:s390x (3.12.2-4build4) ... Setting up libxcb-xinput0:s390x (1.15-1) ... Setting up libcurl4t64:s390x (8.5.0-2ubuntu9) ... Setting up libccp4-dev:s390x (8.0.0-2) ... Setting up libtool (2.4.7-7) ... Setting up libxcb-render0:s390x (1.15-1) ... Setting up libfftw3-bin (3.3.10-1ubuntu3) ... Setting up libwacom9:s390x (2.10.0-2) ... Setting up libjq1:s390x (1.7.1-3build1) ... Setting up fontconfig-config (2.15.0-1.1ubuntu2) ... Setting up libxcb-glx0:s390x (1.15-1) ... Setting up libwebpdemux2:s390x (1.3.2-0.4build2) ... Setting up python3.12 (3.12.2-4build4) ... Setting up libedit2:s390x (3.1-20230828-1) ... Setting up libxcb-keysyms1:s390x (0.4.0-1build3) ... Setting up libaec-dev:s390x (1.1.2-1) ... Setting up libxcb-shape0:s390x (1.15-1) ... Setting up libavahi-common3:s390x (0.8-13ubuntu5) ... Setting up libboost-serialization1.83-dev:s390x (1.83.0-2.1ubuntu2) ... Setting up libjbig-dev:s390x (2.1-6.1ubuntu1) ... Setting up libxcb-render-util0:s390x (0.3.9-1build3) ... Setting up libcurl3-gnutls:s390x (8.5.0-2ubuntu2) ... Setting up libxcb-shm0:s390x (1.15-1) ... Setting up libxcb-icccm4:s390x (0.4.1-1.1build2) ... Setting up dbus-daemon (1.14.10-4ubuntu3) ... Setting up xfonts-utils (1:7.7+6build2) ... Setting up libcolord2:s390x (1.4.7-1build2) ... Setting up libxcb-util1:s390x (0.4.0-1build2) ... Setting up pkgconf:s390x (1.8.1-2) ... Setting up libinput-bin (1.25.0-1ubuntu1) ... Setting up libxcb-xkb1:s390x (1.15-1) ... Setting up libxcb-image0:s390x (0.4.0-2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libnl-route-3-200:s390x (3.7.0-0.3) ... Setting up libxcb-present0:s390x (1.15-1) ... Setting up libdconf1:s390x (0.40.0-4build2) ... Setting up libpython3.12t64:s390x (3.12.2-4build4) ... Setting up dh-autoreconf (20) ... Setting up libthai0:s390x (0.1.29-2) ... Setting up libxdmcp-dev:s390x (1:1.1.3-0ubuntu5) ... Setting up libwebp-dev:s390x (1.3.2-0.4build2) ... Setting up libxcb-xinerama0:s390x (1.15-1) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libllvm17t64:s390x (1:17.0.6-9build2) ... Setting up libcurl4-openssl-dev:s390x (8.5.0-2ubuntu9) ... Setting up libxcb-sync1:s390x (1.15-1) ... Setting up libboost-date-time1.83-dev:s390x (1.83.0-2.1ubuntu2) ... Setting up libraqm0:s390x (0.10.1-1) ... Setting up dbus (1.14.10-4ubuntu3) ... Setting up shared-mime-info (2.4-1build2) ... Setting up libboost-numpy-dev (1.83.0.1ubuntu2) ... Setting up libxkbcommon-x11-0:s390x (1.6.0-1) ... Setting up libeigen3-dev (3.4.0-4) ... Setting up pkg-config:s390x (1.8.1-2) ... Setting up libjs-sphinxdoc (7.2.6-6) ... Setting up libssm-dev:s390x (1.4.0-2) ... Setting up libxcb-dri2-0:s390x (1.15-1) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up libdrm2:s390x (2.4.120-2) ... Setting up groff-base (1.23.0-3build2) ... Setting up libtiff6:s390x (4.5.1+git230720-4ubuntu2) ... Setting up libwayland-cursor0:s390x (1.22.0-2.1) ... Setting up libxcb-randr0:s390x (1.15-1) ... Setting up xml-core (0.19) ... Setting up jq (1.7.1-3build1) ... Setting up libxslt1.1:s390x (1.1.39-0exp1build1) ... Setting up libpam-systemd:s390x (255.4-1ubuntu5) ... Setting up libx11-6:s390x (2:1.8.7-1) ... Setting up libgdk-pixbuf-2.0-0:s390x (2.42.10+dfsg-3ubuntu2) ... Setting up libfontconfig1:s390x (2.15.0-1.1ubuntu2) ... Setting up libwxbase3.2-1t64:s390x (3.2.4+dfsg-4) ... Setting up libjpeg8-dev:s390x (8c-2ubuntu11) ... Setting up libhdf5-103-1t64:s390x (1.10.10+repack-3.1ubuntu4) ... Setting up libtiffxx6:s390x (4.5.1+git230720-4ubuntu2) ... Setting up libxcomposite1:s390x (1:0.4.5-1build2) ... Setting up libsm6:s390x (2:1.2.3-1build2) ... Setting up libfftw3-dev:s390x (3.3.10-1ubuntu3) ... Setting up libavahi-client3:s390x (0.8-13ubuntu5) ... Setting up rsync (3.2.7-1build2) ... Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up libpython3-stdlib:s390x (3.12.2-0ubuntu2) ... Setting up liblbfgsb0:s390x (3.0+dfsg.4-1) ... Setting up libdrm-amdgpu1:s390x (2.4.120-2) ... Setting up libboost-thread1.83-dev:s390x (1.83.0-2.1ubuntu2) ... Setting up libxcb-dri3-0:s390x (1.15-1) ... Setting up libinput10:s390x (1.25.0-1ubuntu1) ... Setting up gtk-update-icon-cache (3.24.41-1.1ubuntu4) ... Setting up libhdf5-hl-100t64:s390x (1.10.10+repack-3.1ubuntu4) ... Setting up libx11-xcb1:s390x (2:1.8.7-1) ... Setting up libibverbs1:s390x (50.0-2build1) ... Setting up fontconfig (2.15.0-1.1ubuntu2) ... Regenerating fonts cache... done. Setting up libdrm-nouveau2:s390x (2.4.120-2) ... Setting up libxdamage1:s390x (1:1.1.6-1) ... Setting up libxcb1-dev:s390x (1.15-1) ... Setting up libcbf1t64:s390x (0.9.7+dfsg1-3.1build2) ... Setting up libxrender1:s390x (1:0.9.10-1.1) ... Setting up libgbm1:s390x (24.0.3-1ubuntu4) ... Setting up ibverbs-providers:s390x (50.0-2build1) ... Setting up libdrm-radeon1:s390x (2.4.120-2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpango-1.0-0:s390x (1.52.1+ds-1build1) ... Setting up libhdf5-cpp-103-1t64:s390x (1.10.10+repack-3.1ubuntu4) ... Setting up libgl1-mesa-dri:s390x (24.0.3-1ubuntu4) ... Setting up libjpeg-dev:s390x (8c-2ubuntu11) ... Setting up libx11-dev:s390x (2:1.8.7-1) ... Setting up libxext6:s390x (2:1.3.4-1build1) ... Setting up libhdf5-fortran-102t64:s390x (1.10.10+repack-3.1ubuntu4) ... Setting up python3 (3.12.2-0ubuntu2) ... Setting up libpython3.12-dev:s390x (3.12.2-4build4) ... Setting up fonts-urw-base35 (20200910-8) ... Setting up python3-freetype (2.4.0-1) ... Setting up man-db (2.12.0-4build1) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /usr/lib/systemd/system/man-db.timer. Setting up python3-wheel (0.42.0-2) ... Setting up libcairo2:s390x (1.18.0-3) ... Setting up python3-psutil (5.9.8-2build1) ... Setting up python3-tz (2024.1-2) ... Setting up python3-orderedset (2.0.3+ds1-2) ... Setting up libxxf86vm1:s390x (1:1.1.4-1build3) ... Setting up libxnvctrl0:s390x (510.47.03-0ubuntu4) ... Setting up python3-six (1.16.0-4) ... Setting up python3-pil:s390x (10.2.0-1) ... Setting up dbus-user-session (1.14.10-4ubuntu3) ... Setting up libqt5core5t64:s390x (5.15.12+dfsg-3ubuntu6) ... Setting up python3-decorator (5.1.1-5) ... Setting up libegl-mesa0:s390x (24.0.3-1ubuntu4) ... Setting up python3-packaging (23.2-1) ... Setting up python3-pyparsing (3.1.1-1) ... Setting up python3-certifi (2023.11.17-1) ... Setting up libtiff-dev:s390x (4.5.1+git230720-4ubuntu2) ... Setting up libxfixes3:s390x (1:6.0.0-2) ... Setting up libnotify4:s390x (0.8.3-1build2) ... Setting up python3-brotli (1.1.0-2build1) ... Setting up python3-cycler (0.11.0-2) ... Setting up libxinerama1:s390x (2:1.1.4-3) ... Setting up python3-pycbf (0.9.7+dfsg1-3.1build2) ... Setting up python3-kiwisolver (1.4.4-2build1) ... Setting up python3-idna (3.6-2) ... Setting up libxrandr2:s390x (2:1.5.2-2) ... Setting up python3.12-dev (3.12.2-4build4) ... Setting up python3-urllib3 (2.0.7-1) ... Setting up python3-pluggy (1.4.0-1) ... Setting up libnetcdf19:s390x (1:4.9.2-3ubuntu1) ... Setting up python3-pyqt5.sip (12.13.0-1build3) ... Setting up python3-lxml:s390x (5.1.0-1build2) ... Setting up libegl1:s390x (1.7.0-1) ... Setting up libqt5sql5t64:s390x (5.15.12+dfsg-3ubuntu6) ... Setting up librdmacm1t64:s390x (50.0-2build1) ... Setting up python3-dateutil (2.8.2-3) ... Setting up python3-msgpack (1.0.3-3build1) ... Setting up libcairo-gobject2:s390x (1.18.0-3) ... Setting up libxss1:s390x (1:1.2.3-1build2) ... Setting up libpangoft2-1.0-0:s390x (1.52.1+ds-1build1) ... Setting up python3-mpmath (1.2.1-3) ... Setting up libhdf5-hl-cpp-100t64:s390x (1.10.10+repack-3.1ubuntu4) ... Setting up python3-appdirs (1.4.4-4) ... Setting up libcups2t64:s390x (2.4.7-1.2ubuntu3) ... Setting up python3-procrunner (2.3.3-1) ... Setting up libboost-thread-dev:s390x (1.83.0.1ubuntu2) ... Setting up libpangocairo-1.0-0:s390x (1.52.1+ds-1build1) ... Setting up python3-pkg-resources (68.1.2-2ubuntu1) ... Setting up libfabric1:s390x (1.17.0-3build1) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-sympy (1.12-7) ... Setting up python3-attr (23.2.0-2) ... Setting up libxft2:s390x (2.3.6-1) ... Setting up libqt5dbus5t64:s390x (5.15.12+dfsg-3ubuntu6) ... Setting up libglx-mesa0:s390x (24.0.3-1ubuntu4) ... Setting up libpython3-dev:s390x (3.12.2-0ubuntu2) ... Setting up python3-cairo (1.25.1-2build2) ... Setting up python3-setuptools (68.1.2-2ubuntu1) ... Setting up libxi6:s390x (2:1.8.1-1) ... Setting up libglx0:s390x (1.7.0-1) ... Setting up python3-lz4 (4.0.2+dfsg-1build4) ... Setting up python3-pytest (8.0.2-1) ... Setting up libxtst6:s390x (2:1.2.3-1.1) ... Setting up libtk8.6:s390x (8.6.14-1build1) ... Setting up libxcursor1:s390x (1:1.2.1-1) ... Setting up python3-tqdm (4.66.2-2) ... Setting up libqt5network5t64:s390x (5.15.12+dfsg-3ubuntu6) ... Setting up libhdf5-hl-fortran-100t64:s390x (1.10.10+repack-3.1ubuntu4) ... Setting up libqt5xml5t64:s390x (5.15.12+dfsg-3ubuntu6) ... Setting up python3-all (3.12.2-0ubuntu2) ... Setting up debhelper (13.14.1ubuntu5) ... Setting up dconf-service (0.40.0-4build2) ... Setting up dh-exec (0.29) ... Setting up libqt5test5t64:s390x (5.15.12+dfsg-3ubuntu6) ... Setting up libhwloc-plugins:s390x (2.10.0-1) ... Setting up pybind11-dev (2.11.1-2) ... Setting up python3-fs (2.4.16-3) ... Setting up python3-pint (0.19.2-1) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up libgl1:s390x (1.7.0-1) ... Setting up python3-rlpycairo (0.3.0-3) ... Setting up libpython3-all-dev:s390x (3.12.2-0ubuntu2) ... Setting up libatspi2.0-0t64:s390x (2.52.0-1) ... Setting up python3-dev (3.12.2-0ubuntu2) ... Setting up python3-requests (2.31.0+dfsg-1ubuntu1) ... Setting up libboost-python1.83-dev (1.83.0-2.1ubuntu2) ... Setting up libhdf5-dev (1.10.10+repack-3.1ubuntu4) ... update-alternatives: using /usr/lib/s390x-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/s390x-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up scons (4.5.2+dfsg-1) ... Setting up libpmix2t64:s390x (5.0.1-4.1) ... Setting up python3-pip (24.0+dfsg-1ubuntu1) ... Setting up python3-numpy (1:1.24.2-3ubuntu1) ... Setting up libglew2.2:s390x (2.2.0-4) ... Setting up libopenmpi3t64:s390x (4.1.6-7ubuntu1) ... Setting up python3-reportlab (4.1.0-4) ... Setting up libglx-dev:s390x (1.7.0-1) ... Setting up python3-contourpy (1.0.7-2build1) ... Setting up libgl-dev:s390x (1.7.0-1) ... Setting up python3-mrcfile (1.4.3-3) ... Setting up dh-python (6.20231223ubuntu2) ... Setting up python3-all-dev (3.12.2-0ubuntu2) ... Setting up libatk-bridge2.0-0t64:s390x (2.52.0-1) ... Setting up tk8.6-blt2.5 (2.5.3+dfsg-7) ... Setting up python3-scipy (1.11.4-6) ... Setting up dconf-gsettings-backend:s390x (0.40.0-4build2) ... Setting up blt (2.5.3+dfsg-7) ... Setting up sfftw2 (2.1.5-6build2) ... Setting up python3-h5py-serial (3.10.0-1ubuntu2) ... Setting up python3-tk:s390x (3.12.2-3ubuntu4) ... Setting up python3-opengl (3.1.7+dfsg-1) ... /usr/lib/python3/dist-packages/OpenGL/GL/AMD/vertex_shader_tessellator.py:1: SyntaxWarning: invalid escape sequence '\ ' '''OpenGL extension AMD.vertex_shader_tessellator Setting up libboost-python-dev (1.83.0.1ubuntu2) ... Setting up libqt5gui5t64:s390x (5.15.12+dfsg-3ubuntu6) ... Setting up fftw2 (2.1.5-6build2) ... Setting up python3-pil.imagetk:s390x (10.2.0-1) ... Setting up libcbf-dev:s390x (0.9.7+dfsg1-3.1build2) ... Setting up python3-h5py (3.10.0-1ubuntu2) ... Setting up sfftw-dev (2.1.5-6build2) ... Setting up libglu1-mesa-dev:s390x (9.0.2-1.1) ... Setting up libclipper2:s390x (2.1.20201109-2) ... Setting up fftw-dev (2.1.5-6build2) ... Setting up python3-nxmx (0.0.3-2) ... Setting up libgtk-3-common (3.24.41-1.1ubuntu4) ... Setting up libqt5widgets5t64:s390x (5.15.12+dfsg-3ubuntu6) ... Setting up libqt5help5:s390x (5.15.12-2build2) ... Setting up libclipper-dev:s390x (2.1.20201109-2) ... Setting up libqt5opengl5t64:s390x (5.15.12+dfsg-3ubuntu6) ... Setting up libqt5printsupport5t64:s390x (5.15.12+dfsg-3ubuntu6) ... Setting up libqt5designer5:s390x (5.15.12-2build2) ... Setting up python3-pyqt5 (5.15.10+dfsg-1build4) ... Setting up python3-pyqt5.qtopengl (5.15.10+dfsg-1build4) ... Setting up python3-pymol (2.5.0+dfsg-1build5) ... /usr/lib/python3/dist-packages/chempy/sdf.py:23: SyntaxWarning: invalid escape sequence '\s' getkee = re.compile("^>\s+<([^>]*)>") /usr/lib/python3/dist-packages/chempy/sdf.py:24: SyntaxWarning: invalid escape sequence '\s' gettag = re.compile("^>\s+<[^>]*>\s+\((.*)\)") /usr/lib/python3/dist-packages/pmg_tk/skins/normal/__init__.py:849: SyntaxWarning: invalid escape sequence '\.' g = re.search("(.*)(\..*)$", save_file) /usr/lib/python3/dist-packages/pmg_tk/skins/normal/__init__.py:889: SyntaxWarning: invalid escape sequence '\.' if re.search("\.pym*$|\.PYM*$",ofile): /usr/lib/python3/dist-packages/pymol/internal.py:252: SyntaxWarning: invalid escape sequence '\.' if re.search("[0-9]*\.png$",fname): # remove numbering, etc. /usr/lib/python3/dist-packages/pymol/internal.py:253: SyntaxWarning: invalid escape sequence '\.' fname = re.sub("[0-9]*\.png$","",fname) /usr/lib/python3/dist-packages/pymol/internal.py:254: SyntaxWarning: invalid escape sequence '\.' if re.search("[0-9]*\.ppm$",fname): /usr/lib/python3/dist-packages/pymol/internal.py:257: SyntaxWarning: invalid escape sequence '\.' fname = re.sub("[0-9]*\.ppm$","",fname) /usr/lib/python3/dist-packages/pymol/movie.py:818: SyntaxWarning: invalid escape sequence '\W' '''Return full path to executable or None. /usr/lib/python3/dist-packages/pymol/moving.py:733: SyntaxWarning: invalid escape sequence '\s' input = re.sub("\s"," ",specification) /usr/lib/python3/dist-packages/pymol/parser.py:48: SyntaxWarning: invalid escape sequence '\[' remove_lists_re = re.compile("\[[^\]]*\]") /usr/lib/python3/dist-packages/pymol/parser.py:408: SyntaxWarning: invalid escape sequence '\.' if re.search("\.py$|\.pym$",path) is not None: /usr/lib/python3/dist-packages/pymol/plugins/installation.py:23: SyntaxWarning: invalid escape sequence '\p' ''' /usr/lib/python3/dist-packages/pymol/viewing.py:899: SyntaxWarning: invalid escape sequence '\.' re_pat = re.compile("[0-9]+\.") /usr/lib/python3/dist-packages/pymol/viewing.py:912: SyntaxWarning: invalid escape sequence '\.' new_file = re.sub("\.pse$",".psw",new_file,re.I) /usr/lib/python3/dist-packages/pymol/viewing.py:914: SyntaxWarning: invalid escape sequence '\.' new_file = re.sub("\.psw$",".pse",new_file,re.I) /usr/lib/python3/dist-packages/pymol/wizard/pseudoatom.py:13: SyntaxWarning: invalid escape sequence '\8' self.prefix = 'Label text: \888' Setting up python3-fonttools (4.46.0-1build2) ... Setting up adwaita-icon-theme (46.0-1) ... update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode Setting up libgtk-3-0t64:s390x (3.24.41-1.1ubuntu4) ... Setting up python3-ufolib2 (0.16.0+dfsg1-1) ... Setting up libwxgtk3.2-1t64:s390x (3.2.4+dfsg-4) ... Setting up libwxgtk-gl3.2-1t64:s390x (3.2.4+dfsg-4) ... Setting up python3-matplotlib (3.6.3-1ubuntu3) ... Setting up python3-wxgtk4.0 (4.2.1+dfsg-3build1) ... Setting up humanity-icon-theme (0.6.16) ... Setting up ubuntu-mono (24.04-0ubuntu1) ... Processing triggers for systemd (255.4-1ubuntu5) ... Processing triggers for libc-bin (2.39-0ubuntu8) ... Processing triggers for sgml-base (1.31) ... Setting up w3c-sgml-lib (1.3-3) ... Setting up python3-biopython (1.81+dfsg-3) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (s390x included in amd64 arm64 armel armhf i386 ppc64 ppc64el riscv64 s390x) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.4.0-173-generic #191-Ubuntu SMP Fri Feb 2 13:54:49 UTC 2024 s390x (s390x) Toolchain package versions: binutils_2.42-4ubuntu2 dpkg-dev_1.22.6ubuntu6 g++-13_13.2.0-23ubuntu3 gcc-13_13.2.0-23ubuntu3 libc6-dev_2.39-0ubuntu8 libstdc++-13-dev_13.2.0-23ubuntu3 libstdc++6_14-20240330-1ubuntu2 linux-libc-dev_6.8.0-20.20 Package versions: adduser_3.137ubuntu1 advancecomp_2.5-1 adwaita-icon-theme_46.0-1 apt_2.7.14 apt-utils_2.7.14 at-spi2-common_2.52.0-1 autoconf_2.71-3 automake_1:1.16.5-1.3ubuntu1 autopoint_0.21-14ubuntu1 autotools-dev_20220109.1 base-files_13ubuntu9 base-passwd_3.6.3 bash_5.2.21-2ubuntu4 bash-completion_1:2.11-8 binutils_2.42-4ubuntu2 binutils-common_2.42-4ubuntu2 binutils-s390x-linux-gnu_2.42-4ubuntu2 blt_2.5.3+dfsg-7 bsdextrautils_2.39.3-9ubuntu3 bsdutils_1:2.39.3-9ubuntu3 build-essential_12.10ubuntu1 bzip2_1.0.8-5.1 ca-certificates_20240203 coreutils_9.4-3ubuntu5 cpp_4:13.2.0-7ubuntu1 cpp-13_13.2.0-23ubuntu3 cpp-13-s390x-linux-gnu_13.2.0-23ubuntu3 cpp-s390x-linux-gnu_4:13.2.0-7ubuntu1 dash_0.5.12-6ubuntu5 dbus_1.14.10-4ubuntu3 dbus-bin_1.14.10-4ubuntu3 dbus-daemon_1.14.10-4ubuntu3 dbus-session-bus-common_1.14.10-4ubuntu3 dbus-system-bus-common_1.14.10-4ubuntu3 dbus-user-session_1.14.10-4ubuntu3 dconf-gsettings-backend_0.40.0-4build2 dconf-service_0.40.0-4build2 debconf_1.5.86 debconf-i18n_1.5.86 debhelper_13.14.1ubuntu5 debianutils_5.17build1 debugedit_1:5.0-5build1 dh-autoreconf_20 dh-exec_0.29 dh-python_6.20231223ubuntu2 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.10-1 dpkg_1.22.6ubuntu6 dpkg-dev_1.22.6ubuntu6 dwz_0.15-1build5 e2fsprogs_1.47.0-2.4~exp1ubuntu3 fakeroot_1.33-1 fftw-dev_2.1.5-6build2 fftw2_2.1.5-6build2 file_1:5.45-3build1 findutils_4.9.0-5 fontconfig_2.15.0-1.1ubuntu2 fontconfig-config_2.15.0-1.1ubuntu2 fonts-dejavu-core_2.37-8 fonts-dejavu-mono_2.37-8 fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1 fonts-lato_2.015-1 fonts-lyx_2.4.0~RC3-1build3 fonts-urw-base35_20200910-8 g++_4:13.2.0-7ubuntu1 g++-13_13.2.0-23ubuntu3 g++-13-s390x-linux-gnu_13.2.0-23ubuntu3 g++-s390x-linux-gnu_4:13.2.0-7ubuntu1 gcc_4:13.2.0-7ubuntu1 gcc-13_13.2.0-23ubuntu3 gcc-13-base_13.2.0-23ubuntu3 gcc-13-s390x-linux-gnu_13.2.0-23ubuntu3 gcc-14-base_14-20240330-1ubuntu2 gcc-s390x-linux-gnu_4:13.2.0-7ubuntu1 gettext_0.21-14ubuntu1 gettext-base_0.21-14ubuntu1 gpg_2.4.4-2ubuntu16 gpg-agent_2.4.4-2ubuntu16 gpgconf_2.4.4-2ubuntu16 gpgv_2.4.4-2ubuntu16 grep_3.11-4 groff-base_1.23.0-3build2 gtk-update-icon-cache_3.24.41-1.1ubuntu4 gzip_1.12-1ubuntu2 hdf5-helpers_1.10.10+repack-3.1ubuntu4 hicolor-icon-theme_0.17-2 hostname_3.23+nmu2ubuntu1 humanity-icon-theme_0.6.16 ibverbs-providers_50.0-2build1 init_1.66ubuntu1 init-system-helpers_1.66ubuntu1 intltool-debian_0.35.0+20060710.6 jq_1.7.1-3build1 krb5-locales_1.20.1-6ubuntu1 libacl1_2.3.2-1 libaec-dev_1.1.2-1 libaec0_1.1.2-1 libann-cctbx-dev_1.1.2+doc-9 libann-cctbx0_1.1.2+doc-9 libantlr3c-3.4-0_3.4+dfsg-4build1 libantlr3c-dev_3.4+dfsg-4build1 libapparmor1_4.0.0-beta3-0ubuntu3 libapt-pkg6.0t64_2.7.14 libarchive-zip-perl_1.68-1 libargon2-1_0~20190702+dfsg-4 libasan8_14-20240330-1ubuntu2 libassuan0_2.5.6-1 libatk-bridge2.0-0t64_2.52.0-1 libatk1.0-0t64_2.52.0-1 libatomic1_14-20240330-1ubuntu2 libatspi2.0-0t64_2.52.0-1 libattr1_1:2.5.2-1 libaudit-common_1:3.1.2-2.1build1 libaudit1_1:3.1.2-2.1build1 libavahi-client3_0.8-13ubuntu5 libavahi-common-data_0.8-13ubuntu5 libavahi-common3_0.8-13ubuntu5 libbinutils_2.42-4ubuntu2 libblas3_3.12.0-3 libblkid1_2.39.3-9ubuntu3 libboost-atomic1.83-dev_1.83.0-2.1ubuntu2 libboost-atomic1.83.0_1.83.0-2.1ubuntu2 libboost-chrono1.83-dev_1.83.0-2.1ubuntu2 libboost-chrono1.83.0t64_1.83.0-2.1ubuntu2 libboost-date-time1.83-dev_1.83.0-2.1ubuntu2 libboost-date-time1.83.0_1.83.0-2.1ubuntu2 libboost-dev_1.83.0.1ubuntu2 libboost-numpy-dev_1.83.0.1ubuntu2 libboost-numpy1.83-dev_1.83.0-2.1ubuntu2 libboost-numpy1.83.0_1.83.0-2.1ubuntu2 libboost-python-dev_1.83.0.1ubuntu2 libboost-python1.83-dev_1.83.0-2.1ubuntu2 libboost-python1.83.0_1.83.0-2.1ubuntu2 libboost-serialization1.83-dev_1.83.0-2.1ubuntu2 libboost-serialization1.83.0_1.83.0-2.1ubuntu2 libboost-system1.83-dev_1.83.0-2.1ubuntu2 libboost-system1.83.0_1.83.0-2.1ubuntu2 libboost-thread-dev_1.83.0.1ubuntu2 libboost-thread1.83-dev_1.83.0-2.1ubuntu2 libboost-thread1.83.0_1.83.0-2.1ubuntu2 libboost1.83-dev_1.83.0-2.1ubuntu2 libbrotli1_1.1.0-2build1 libbsd0_0.12.1-1build1 libbz2-1.0_1.0.8-5.1 libc-bin_2.39-0ubuntu8 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xfonts-encodings_1:1.0.5-0ubuntu2 xfonts-utils_1:7.7+6build2 xkb-data_2.41-2 xml-core_0.19 xorg-sgml-doctools_1:1.11-1.1 xtrans-dev_1.4.0-1 xz-utils_5.6.1+really5.4.5-1build1 zlib1g_1:1.3.dfsg-3.1ubuntu2 zlib1g-dev_1:1.3.dfsg-3.1ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: cctbx Binary: libcctbx0, libcctbx-dev, python3-cctbx Architecture: amd64 arm64 armel armhf i386 ppc64 ppc64el riscv64 s390x Version: 2023.12+ds2+~3.17.0+ds1-4build2 Maintainer: Ubuntu Developers Uploaders: Picca Frédéric-Emmanuel , Radostan Riedel , Homepage: https://github.com/cctbx/cctbx_project Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/science-team/cctbx Vcs-Git: https://salsa.debian.org/science-team/cctbx.git Testsuite: autopkgtest Testsuite-Triggers: bitshuffle, g++, python3-all, python3-dials-data, python3-h5py, python3-pytest, python3-pytest-mock, python3-pytest-regressions Build-Depends: debhelper-compat (= 13), dh-exec, dh-python, dh-sequence-numpy3, dh-sequence-python3, jq, libann-cctbx-dev (>= 1.1.2+doc-9~), libantlr3c-dev, libboost-dev, libboost-numpy-dev, libboost-python-dev, libboost-thread-dev, libcbf-dev (>= 0.9.7+dfsg1-2~), libclipper-dev, libeigen3-dev, libexpat1-dev, libfftw3-dev, libgl-dev, libglu1-mesa-dev, libhdf5-dev, liblz4-dev, libssm-dev, libtiff-dev, libtool, pybind11-dev, python3-all-dev:any, python3-biopython, python3-h5py (>= 3) , python3-matplotlib, python3-mrcfile, python3-msgpack, python3-numpy, python3-nxmx, python3-orderedset, python3-pint, python3-pip, python3-procrunner, python3-psutil, python3-pycbf (>= 0.9.7+dfsg1-2~), python3-pymol, python3-pytest , python3-requests, python3-scipy, python3-setuptools, python3-six, python3-tqdm , python3-wxgtk4.0, rsync, scons Package-List: libcctbx-dev deb devel optional arch=amd64,arm64,armel,armhf,i386,ppc64,ppc64el,riscv64,s390x libcctbx0 deb libs optional arch=amd64,arm64,armel,armhf,i386,ppc64,ppc64el,riscv64,s390x python3-cctbx deb python optional arch=amd64,arm64,armel,armhf,i386,ppc64,ppc64el,riscv64,s390x Checksums-Sha1: 583bc5895221491d4781f9b93c10e83631ea2a6c 352408 cctbx_2023.12+ds2+~3.17.0+ds1.orig-dxtbx.tar.xz d8d510a0b3209e405f33e661c932251e5a9927e6 23566808 cctbx_2023.12+ds2+~3.17.0+ds1.orig.tar.xz e8ab16390728cee05fdd6b8d4c6c8e1608658f38 417300 cctbx_2023.12+ds2+~3.17.0+ds1-4build2.debian.tar.xz Checksums-Sha256: 82bd787fee9624766cb748f58368535bcf7bb35100c660f397a07e93b5b906da 352408 cctbx_2023.12+ds2+~3.17.0+ds1.orig-dxtbx.tar.xz b9fb29501e5916d780e9088415d738fa4f115e2b698908ade233a1295fb352f7 23566808 cctbx_2023.12+ds2+~3.17.0+ds1.orig.tar.xz b4693a9c813197d80f254a54fca393fb353ee62a886561830aaa6781dd8d8053 417300 cctbx_2023.12+ds2+~3.17.0+ds1-4build2.debian.tar.xz Files: c4433045379327608dad40e2fb4f23a4 352408 cctbx_2023.12+ds2+~3.17.0+ds1.orig-dxtbx.tar.xz 5f5060528d2079c30a309afdea3c6a28 23566808 cctbx_2023.12+ds2+~3.17.0+ds1.orig.tar.xz 75462826a005dca4d0c68289a8fb1ced 417300 cctbx_2023.12+ds2+~3.17.0+ds1-4build2.debian.tar.xz Original-Maintainer: Debian Science Maintainers -----BEGIN PGP SIGNATURE----- iQJOBAEBCgA4FiEErEg/aN5yj0PyIC/KVo0w8yGyEz0FAmYJoYwaHHN0ZXZlLmxh bmdhc2VrQHVidW50dS5jb20ACgkQVo0w8yGyEz3xURAAmX8RcVi7PXN6HoVguRGw bAsz+IAF/qL54mMDGvdkMku+D1dX6voCRHbU7NQsnp5Q/39uW3j+smvTsfhQ9OAY XVF2FDzBwgYEic6hw7elvZwwZCuhYk866iQqNByLgt8NkjS+DgrqrDom3tiYgWAD Taim2iAUrRryUgcWvA/azSvVVW6fK2uOON7kJ8XgULhomGGXZsgYH5cbbQG+ie3N UfMye7jULEHK5MBISnklj/aZCsGnPneP6a4Ajs7cYQ0wR6PW2DvC/89TxJlb4OOv syJKW8dkyF6U9yEOZC1EALH6p6WpYVwEfMuvx0GbWxydtAsdZZeY3D+g5Al9DaRD Ilr9MT4apvI8DiWDeyt7NLuzT1rhM4NxfDWxIeC2THkpZNkFV9aa+7nU/4fKNjZM CscbabitlI0KkZjoES4BvJg9Nxl2MY1OJ2Hqe/KXCWYSnNiOK0y40xSUZkWxKGrQ z5Cqa+1dwCvXz0JTpAKST+3HUTJIgYEuBoMhnbcBs2qrfTfJ9gYNe4J71UX+/GAi 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reproducible-timestamp.patch dpkg-source: info: applying libtbx_env-per-python-version.patch dpkg-source: info: applying iotbx_with_system_libraries.patch dpkg-source: info: applying 0007-iotbx-mtz-load-ccp4-data-from-the-right-directory.patch dpkg-source: info: applying 0009-scons-soname.patch dpkg-source: info: applying 0010-fix-cbflib_adaptbx-compilation-with-the-system-cbfli.patch dpkg-source: info: applying 0011-dxtbx-use-the-system-libraries.patch dpkg-source: info: applying 0012-dxtbx-remove-hdf5plugin.patch dpkg-source: info: applying 0013-dxtbx-do-not-modify-the-HDF5_PLUGIN_PATH.patch dpkg-source: info: applying 0015-dxtbx-adapte-the-boost_python-link-name.patch dpkg-source: info: applying 0016-cctbx-avoid-FTBFS-when-cctbx-is-already-installed.patch dpkg-source: info: applying 0017-cctbx-do-not-hide-sign-comparison.patch dpkg-source: info: applying 0017-dxtbx-fix-for-unsigned-char-arch.patch dpkg-source: info: applying 0016-unactivated-ucif-compilation.patch dpkg-source: info: applying 0017-smtbx-save-the-generated-test-file-under-tmp.patch dpkg-source: info: applying 0018-iotbx-link-with-ccp4c-instead-of-ccp4io.patch dpkg-source: info: applying 0019-cbflib_adapter-link-cbf-private-with-cbf.patch dpkg-source: info: applying 0020-spotfinder-link-with-dxtbxspotfinder.patch dpkg-source: info: applying 0021-rstbx-link-with-ann_adaptor.patch dpkg-source: info: applying 0022-rstbx-link-rstbx_integration_ext-with-ann_adaptor.patch dpkg-source: info: applying 0023-rstbx-use-the-annself_excluded-namespace-from-ann-cc.patch dpkg-source: info: applying 0024-more-ann-ann-cctbx.patch dpkg-source: info: applying 0031-Add-missing-ctdint-header.patch dpkg-source: info: applying 0026-adapt-format-registry-to-Python-3.12.patch dpkg-source: info: applying 0032-no-future.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-27987401 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-27987401 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-27987401 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- Command: dpkg-buildpackage -us -uc -mLaunchpad Build Daemon -B -rfakeroot dpkg-buildpackage: info: source package cctbx dpkg-buildpackage: info: source version 2023.12+ds2+~3.17.0+ds1-4build2 dpkg-buildpackage: info: source distribution noble dpkg-source --before-build . dpkg-buildpackage: info: host architecture s390x debian/rules clean dh clean --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' cp -f debian/setup.py setup.py # add missing __init__.py files. It seems that it doesn not work when I use a patch touch serialtbx/__init__.py touch serialtbx/detector/legacy_metrology/__init__.py touch serialtbx/mono_simulation/__init__.py touch serialtbx/util/__init__.py cp -r debian/annlib_adaptbx annlib_adaptbx mkdir annlib cp -r debian/ccp4io_adaptbx ccp4io_adaptbx mkdir ccp4io cp -r debian/gui_resources gui_resources dh_auto_clean pybuild --clean -i python{version} -p 3.12 I: pybuild base:305: python3.12 setup.py clean running clean removing '/<>/.pybuild/cpython3_3.12/build' (and everything under it) 'build/bdist.linux-s390x' does not exist -- can't clean it 'build/scripts-3.12' does not exist -- can't clean it rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; find . -name __pycache__ -type d -exec rm -rf {} \; rm -f setup.py rm -rf annlib annlib_adaptbx rm -rf ccp4io ccp4io_adaptbx rm -rf gui_resources rm -f serialtbx/__init__.py rm -f serialtbx/detector/legacy_metrology/__init__.py rm -f serialtbx/mono_simulation/__init__.py rm -f serialtbx/util/__init__.py make[1]: Leaving directory '/<>' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/libcctbx0.substvars debian/libcctbx-dev.substvars debian/python3-cctbx.substvars debian/files rm -fr -- debian/libcctbx0/ debian/tmp/ debian/libcctbx-dev/ debian/python3-cctbx/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary-arch dh binary-arch --buildsystem=pybuild dh_update_autotools_config -a -O--buildsystem=pybuild dh_autoreconf -a -O--buildsystem=pybuild debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' cp -f debian/setup.py setup.py # add missing __init__.py files. It seems that it doesn not work when I use a patch touch serialtbx/__init__.py touch serialtbx/detector/legacy_metrology/__init__.py touch serialtbx/mono_simulation/__init__.py touch serialtbx/util/__init__.py cp -r debian/annlib_adaptbx annlib_adaptbx mkdir annlib cp -r debian/ccp4io_adaptbx ccp4io_adaptbx mkdir ccp4io cp -r debian/gui_resources gui_resources # configure the cctbx python modules dh_auto_configure pybuild --configure -i python{version} -p 3.12 I: pybuild base:305: python3.12 setup.py config running config # configure dxtbx python modules dh_auto_configure --sourcedirectory=dxtbx pybuild --configure -i python{version} -p 3.12 --dir dxtbx I: pybuild base:305: python3.12 setup.py config Found 20 dxtbx dispatchers Found 134 Format classes running config # configure the cctbx libtbx build system dh_auto_configure -- -s custom --configure-args="mkdir -p {build_dir}_ && cd {build_dir}_ \ && {interpreter} /<>/libtbx/configure.py --build=debug --use_environment_flags --cxxstd=c++14 annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx annlib ccp4io" pybuild --configure -i python{version} -p 3.12 -s custom "--configure-args=mkdir -p {build_dir}_ && cd {build_dir}_ && {interpreter} /<>/libtbx/configure.py --build=debug --use_environment_flags --cxxstd=c++14 annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx annlib ccp4io" I: pybuild base:305: mkdir -p '/<>/.pybuild/cpython3_3.12/build'_ && cd '/<>/.pybuild/cpython3_3.12/build'_ && python3.12 /<>/libtbx/configure.py --build=debug --use_environment_flags --cxxstd=c++14 annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx annlib ccp4io Python: 3.12.2 "/usr/bin/python3.12" Compiler: default Build mode: debug Warning level: 0 Precompiled Headers: False Static libraries: False Static exe: False Scan Boost headers: False Write full flex_fwd.h files: False Build Boost.Python extensions: True Define BOOST_PYTHON_NO_PY_SIGNATURES: False Define BOOST_PYTHON_BOOL_INT_STRICT: True Enable OpenMP if possible: False Boost threads enabled: True Enable CUDA: False Enable KOKKOS: False Use conda: False Use opt_resources if available: False Use environment flags: True Enable C++11: False CXXFLAGS = -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 CFLAGS = -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 CPPFLAGS = -Wdate-time -D_FORTIFY_SOURCE=3 LDFLAGS = -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 command_version_suffix: None Relocatable paths anchored at: /<>/.pybuild/cpython3_3.12/build_ Top-down list of all modules involved: wxtbx "/<>/wxtbx" serialtbx "/<>/serialtbx" rstbx "/<>/rstbx" spotfinder "/<>/spotfinder" mmtbx "/<>/mmtbx" gltbx "/<>/gltbx" dxtbx "/<>/dxtbx" iotbx "/<>/iotbx" smtbx "/<>/smtbx" ucif "/<>/ucif" crys3d "/<>/crys3d" cctbx "/<>/cctbx" chiltbx "/<>/chiltbx" ccp4io+adaptbx "/<>/ccp4io" "/<>/ccp4io_adaptbx" cbflib_adaptbx "/<>/cbflib_adaptbx" annlib+adaptbx "/<>/annlib" "/<>/annlib_adaptbx" scitbx "/<>/scitbx" fable "/<>/fable" cma_es "/<>/cma_es" omptbx "/<>/omptbx" boost+adaptbx "/<>/boost" "/<>/boost_adaptbx" tbxx "/<>/tbxx" libtbx "/<>/libtbx" Creating files in build directory: "/<>/.pybuild/cpython3_3.12/build_" dispatcher_include_template.sh dispatcher_head.sh setpaths.sh setpaths.csh setpaths_all.sh setpaths_all.csh setpaths_debug.sh unsetpaths.sh setpaths_debug.csh unsetpaths.csh SConstruct Makefile run_tests.csh Processing: "/<>/libtbx/command_line" Processing: "/<>/boost_adaptbx/command_line" Processing: "/<>/fable/command_line" Processing: "/<>/scitbx/command_line" Processing: "/<>/cbflib_adaptbx/command_line" Processing: "/<>/cctbx/command_line" Processing: "/<>/crys3d/command_line" Processing: "/<>/smtbx/command_line" Processing: "/<>/iotbx/command_line" Processing: "/<>/gltbx/command_line" Processing: "/<>/mmtbx/command_line" Processing: "/<>/spotfinder/command_line" Processing: "/<>/rstbx/command_line" Processing: "/<>/wxtbx/command_line" Processing: "/<>/libtbx/libtbx_refresh.py" Processing: "/<>/boost_adaptbx/libtbx_refresh.py" Processing: "/<>/scitbx/libtbx_refresh.py" Generating C++ header files in: "/<>/.pybuild/cpython3_3.12/build_/include/scitbx/array_family" Generating C++ files in: "/<>/.pybuild/cpython3_3.12/build_/include/scitbx/array_family/boost_python" Using fable to convert scitbx/lbfgs.f Updating entry points for scitbx 1 entries for entry point pytest_randomly.random_seeder Obtaining file:///<>/cctbx-2023.12%2Bds2%2B~3.17.0%2Bds1/dxtbx Checking if build backend supports build_editable: started Checking if build backend supports build_editable: finished with status 'done' Preparing metadata (pyproject.toml): started Preparing metadata (pyproject.toml): finished with status 'done' Installing collected packages: dxtbx Running setup.py develop for dxtbx Successfully installed dxtbx Processing: "/<>/cctbx/libtbx_refresh.py" Generating C++ files in: "/<>/.pybuild/cpython3_3.12/build_/cctbx/eltbx" Generating C++ files in: "/<>/.pybuild/cpython3_3.12/build_/include/cctbx/boost_python" Processing: "/<>/crys3d/libtbx_refresh.py" Processing: "/<>/smtbx/libtbx_refresh.py" Generating C++ files in: "/<>/.pybuild/cpython3_3.12/build_/include/smtbx/boost_python" Processing: "/<>/iotbx/libtbx_refresh.py" Using fable to convert iotbx/pdb/hybrid_36_f.f Writing: iotbx/pdb/hybrid_36_fem.cpp Processing: "/<>/dxtbx/libtbx_refresh.py" Processing: "/<>/gltbx/libtbx_refresh.py" Generating C++ files in: "/<>/.pybuild/cpython3_3.12/build_/gltbx" fonts: 8x13 9x15 10x20 /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() Processing: "/<>/mmtbx/libtbx_refresh.py" Done. make[1]: Leaving directory '/<>' rm -f debian/libcctbx-dev.debhelper.log debian/libcctbx0.debhelper.log debian/python3-cctbx.debhelper.log debian/rules override_dh_auto_build make[1]: Entering directory '/<>' # build the python modules dh_auto_build pybuild --build -i python{version} -p 3.12 I: pybuild base:305: /usr/bin/python3 setup.py build running build running build_py creating /<>/.pybuild/cpython3_3.12/build/smtbx copying smtbx/conftest.py -> /<>/.pybuild/cpython3_3.12/build/smtbx copying smtbx/run_tests.py -> /<>/.pybuild/cpython3_3.12/build/smtbx copying smtbx/development.py -> /<>/.pybuild/cpython3_3.12/build/smtbx copying smtbx/utils.py -> /<>/.pybuild/cpython3_3.12/build/smtbx copying smtbx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/smtbx copying smtbx/libtbx_refresh.py -> /<>/.pybuild/cpython3_3.12/build/smtbx creating /<>/.pybuild/cpython3_3.12/build/cctbx_website copying cctbx_website/run_tests.py -> /<>/.pybuild/cpython3_3.12/build/cctbx_website copying cctbx_website/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx_website copying cctbx_website/libtbx_refresh.py -> /<>/.pybuild/cpython3_3.12/build/cctbx_website creating /<>/.pybuild/cpython3_3.12/build/cbflib_adaptbx copying cbflib_adaptbx/copy_files.py -> /<>/.pybuild/cpython3_3.12/build/cbflib_adaptbx copying cbflib_adaptbx/run_tests.py -> /<>/.pybuild/cpython3_3.12/build/cbflib_adaptbx copying cbflib_adaptbx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cbflib_adaptbx copying cbflib_adaptbx/exercise_compression.py -> /<>/.pybuild/cpython3_3.12/build/cbflib_adaptbx creating /<>/.pybuild/cpython3_3.12/build/fast_linalg copying fast_linalg/__init__.py -> /<>/.pybuild/cpython3_3.12/build/fast_linalg creating /<>/.pybuild/cpython3_3.12/build/fable copying fable/tst_cout.py -> /<>/.pybuild/cpython3_3.12/build/fable copying fable/tst_cout_compile.py -> /<>/.pybuild/cpython3_3.12/build/fable copying fable/run_tests.py -> /<>/.pybuild/cpython3_3.12/build/fable copying fable/simple_compilation.py -> /<>/.pybuild/cpython3_3.12/build/fable copying fable/tst_equivalence.py -> /<>/.pybuild/cpython3_3.12/build/fable copying fable/utils.py -> /<>/.pybuild/cpython3_3.12/build/fable copying fable/tst_ext.py -> /<>/.pybuild/cpython3_3.12/build/fable copying fable/cout.py -> /<>/.pybuild/cpython3_3.12/build/fable copying fable/tokenization.py -> /<>/.pybuild/cpython3_3.12/build/fable copying fable/tst_read.py -> /<>/.pybuild/cpython3_3.12/build/fable copying fable/intrinsics.py -> /<>/.pybuild/cpython3_3.12/build/fable copying fable/read.py -> /<>/.pybuild/cpython3_3.12/build/fable copying fable/__init__.py -> /<>/.pybuild/cpython3_3.12/build/fable copying fable/equivalence.py -> /<>/.pybuild/cpython3_3.12/build/fable creating /<>/.pybuild/cpython3_3.12/build/scitbx copying scitbx/regular_grid_on_unit_sphere.py -> /<>/.pybuild/cpython3_3.12/build/scitbx copying scitbx/run_tests.py -> /<>/.pybuild/cpython3_3.12/build/scitbx copying scitbx/fftpack.py -> /<>/.pybuild/cpython3_3.12/build/scitbx copying scitbx/lbfgsb.py -> /<>/.pybuild/cpython3_3.12/build/scitbx copying scitbx/minimizers.py -> /<>/.pybuild/cpython3_3.12/build/scitbx copying scitbx/differential_evolution.py -> /<>/.pybuild/cpython3_3.12/build/scitbx copying scitbx/restraints.py -> /<>/.pybuild/cpython3_3.12/build/scitbx copying scitbx/genetic_algorithm_with_mp.py -> /<>/.pybuild/cpython3_3.12/build/scitbx copying scitbx/r3_utils.py -> /<>/.pybuild/cpython3_3.12/build/scitbx copying scitbx/cross_entropy.py -> /<>/.pybuild/cpython3_3.12/build/scitbx copying scitbx/golden_section_search.py -> /<>/.pybuild/cpython3_3.12/build/scitbx copying scitbx/direct_search_simulated_annealing.py -> /<>/.pybuild/cpython3_3.12/build/scitbx copying scitbx/simplex.py -> /<>/.pybuild/cpython3_3.12/build/scitbx copying scitbx/cubicle_neighbors.py -> /<>/.pybuild/cpython3_3.12/build/scitbx copying scitbx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/scitbx copying scitbx/libtbx_refresh.py -> /<>/.pybuild/cpython3_3.12/build/scitbx copying scitbx/minpack.py -> /<>/.pybuild/cpython3_3.12/build/scitbx copying scitbx/smoothing.py -> /<>/.pybuild/cpython3_3.12/build/scitbx creating /<>/.pybuild/cpython3_3.12/build/spotfinder copying spotfinder/run_tests.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder copying spotfinder/__init__.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder copying spotfinder/exception.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder creating /<>/.pybuild/cpython3_3.12/build/ccp4io_adaptbx copying ccp4io_adaptbx/copy_files.py -> /<>/.pybuild/cpython3_3.12/build/ccp4io_adaptbx copying ccp4io_adaptbx/tst.py -> /<>/.pybuild/cpython3_3.12/build/ccp4io_adaptbx copying ccp4io_adaptbx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/ccp4io_adaptbx creating /<>/.pybuild/cpython3_3.12/build/cma_es copying cma_es/run_tests.py -> /<>/.pybuild/cpython3_3.12/build/cma_es copying cma_es/cma_es_interface.py -> /<>/.pybuild/cpython3_3.12/build/cma_es copying cma_es/tst_cma_es.py -> /<>/.pybuild/cpython3_3.12/build/cma_es copying cma_es/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cma_es creating /<>/.pybuild/cpython3_3.12/build/annlib_adaptbx copying annlib_adaptbx/run_tests.py -> /<>/.pybuild/cpython3_3.12/build/annlib_adaptbx copying annlib_adaptbx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/annlib_adaptbx creating /<>/.pybuild/cpython3_3.12/build/simtbx copying simtbx/run_tests.py -> /<>/.pybuild/cpython3_3.12/build/simtbx copying simtbx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/simtbx creating /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/browser.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/process_control.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/layout.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/polygon.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/ensemble_validation.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/mtz_dump.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/heavy_atoms.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/xtriage.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/errors.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/app.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/wx4_compatibility.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/checklistctrl.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/info_panels.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/custom_restraints.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/metallicbutton.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/tables.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/symmetry_dialog.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/listeditor.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/sequence_view.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/utils.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/misc_dialogs.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/icons.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/qstat_view.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/anomalous_scattering.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/windows.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/b_plot.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/segmentedctrl.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/adp_statistics.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/monitor.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/path_dialogs.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/polygon_db_viewer.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/bitmaps.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/pdb_editor.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx creating /<>/.pybuild/cpython3_3.12/build/fftw3tbx copying fftw3tbx/tst_ext.py -> /<>/.pybuild/cpython3_3.12/build/fftw3tbx copying fftw3tbx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/fftw3tbx copying fftw3tbx/libtbx_refresh.py -> /<>/.pybuild/cpython3_3.12/build/fftw3tbx creating /<>/.pybuild/cpython3_3.12/build/boost_adaptbx copying boost_adaptbx/hybrid_times.py -> /<>/.pybuild/cpython3_3.12/build/boost_adaptbx copying boost_adaptbx/run_tests.py -> /<>/.pybuild/cpython3_3.12/build/boost_adaptbx copying boost_adaptbx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/boost_adaptbx copying boost_adaptbx/libtbx_refresh.py -> /<>/.pybuild/cpython3_3.12/build/boost_adaptbx creating /<>/.pybuild/cpython3_3.12/build/cctbx copying cctbx/multipolar.py -> /<>/.pybuild/cpython3_3.12/build/cctbx copying cctbx/math_module.py -> /<>/.pybuild/cpython3_3.12/build/cctbx copying cctbx/dmtbx.py -> /<>/.pybuild/cpython3_3.12/build/cctbx copying cctbx/french_wilson.py -> /<>/.pybuild/cpython3_3.12/build/cctbx copying cctbx/run_tests.py -> /<>/.pybuild/cpython3_3.12/build/cctbx copying cctbx/euclidean_model_matching.py -> /<>/.pybuild/cpython3_3.12/build/cctbx copying cctbx/crystal_orientation.py -> /<>/.pybuild/cpython3_3.12/build/cctbx copying cctbx/run_examples.py -> /<>/.pybuild/cpython3_3.12/build/cctbx copying cctbx/symmetry_search.py -> /<>/.pybuild/cpython3_3.12/build/cctbx copying cctbx/statistics.py -> /<>/.pybuild/cpython3_3.12/build/cctbx copying cctbx/translation_search.py -> /<>/.pybuild/cpython3_3.12/build/cctbx copying cctbx/r_free_utils.py -> /<>/.pybuild/cpython3_3.12/build/cctbx copying cctbx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx copying cctbx/libtbx_refresh.py -> /<>/.pybuild/cpython3_3.12/build/cctbx copying cctbx/anharmonic.py -> /<>/.pybuild/cpython3_3.12/build/cctbx copying cctbx/adptbx.py -> /<>/.pybuild/cpython3_3.12/build/cctbx creating /<>/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/grow_density.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/map_tools.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/real_space_correlation.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/invariant_domain.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/run_tests.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/model_vs_data.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/domains_from_pae.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/process_predicted_model.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/restraints.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/pdb_distances.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/arrays.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/f_model_info.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/proq2.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/msa.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/superpose.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/lattice.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/xmanip.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/clashes.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/find_peaks.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/pdbtools.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/xmanip_tasks.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/libtbx_refresh.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/pdb_symmetry.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/resolve_resources.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx creating /<>/.pybuild/cpython3_3.12/build/iotbx copying iotbx/cli_parser.py -> /<>/.pybuild/cpython3_3.12/build/iotbx copying iotbx/simple_parser.py -> /<>/.pybuild/cpython3_3.12/build/iotbx copying iotbx/ranges.py -> /<>/.pybuild/cpython3_3.12/build/iotbx copying iotbx/table_one.py -> /<>/.pybuild/cpython3_3.12/build/iotbx copying iotbx/data_plots.py -> /<>/.pybuild/cpython3_3.12/build/iotbx copying iotbx/map_tools.py -> /<>/.pybuild/cpython3_3.12/build/iotbx copying iotbx/reflection_file_converter.py -> /<>/.pybuild/cpython3_3.12/build/iotbx copying iotbx/pymol.py -> /<>/.pybuild/cpython3_3.12/build/iotbx copying iotbx/format.py -> /<>/.pybuild/cpython3_3.12/build/iotbx copying iotbx/reflection_file_editor.py -> /<>/.pybuild/cpython3_3.12/build/iotbx copying iotbx/map_model_manager.py -> /<>/.pybuild/cpython3_3.12/build/iotbx copying iotbx/run_tests.py -> /<>/.pybuild/cpython3_3.12/build/iotbx copying iotbx/crystal_symmetry_from_any.py -> /<>/.pybuild/cpython3_3.12/build/iotbx copying iotbx/reflection_file_reader.py -> /<>/.pybuild/cpython3_3.12/build/iotbx copying iotbx/phil.py -> /<>/.pybuild/cpython3_3.12/build/iotbx copying iotbx/logfiles.py -> /<>/.pybuild/cpython3_3.12/build/iotbx copying iotbx/builders_depending_on_smtbx.py -> /<>/.pybuild/cpython3_3.12/build/iotbx copying iotbx/poscar.py -> /<>/.pybuild/cpython3_3.12/build/iotbx copying iotbx/symmetry.py -> /<>/.pybuild/cpython3_3.12/build/iotbx copying iotbx/csv_utils.py -> /<>/.pybuild/cpython3_3.12/build/iotbx copying iotbx/phases.py -> /<>/.pybuild/cpython3_3.12/build/iotbx copying iotbx/file_reader.py -> /<>/.pybuild/cpython3_3.12/build/iotbx copying iotbx/merging_statistics.py -> /<>/.pybuild/cpython3_3.12/build/iotbx copying iotbx/option_parser.py -> /<>/.pybuild/cpython3_3.12/build/iotbx copying iotbx/cif_mtz_data_labels.py -> /<>/.pybuild/cpython3_3.12/build/iotbx copying iotbx/builders.py -> /<>/.pybuild/cpython3_3.12/build/iotbx copying iotbx/wildcard.py -> /<>/.pybuild/cpython3_3.12/build/iotbx copying iotbx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/iotbx copying iotbx/libtbx_refresh.py -> /<>/.pybuild/cpython3_3.12/build/iotbx copying iotbx/reflection_file_utils.py -> /<>/.pybuild/cpython3_3.12/build/iotbx copying iotbx/map_manager.py -> /<>/.pybuild/cpython3_3.12/build/iotbx copying iotbx/extract_xtal_data.py -> /<>/.pybuild/cpython3_3.12/build/iotbx copying iotbx/mtrix_biomt.py -> /<>/.pybuild/cpython3_3.12/build/iotbx creating /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_program_template.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/pyframe.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_dlite.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_path.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_easy_mp_multicore.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/xmlrpc_utils.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/cli.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/code_analysis.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/subprocess_with_fixes.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/start_print_trace.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/easy_pickle.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/math_utils.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/objgraph.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/dlite.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/easy_mp.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_representation.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/citations.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/run_tests.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/object_oriented_patterns.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_citations.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/topological_sort.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/simplexml.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/clusterTests.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/log.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_binary_search.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/program_template.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/str_utils.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/subversion.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/version.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/path.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/pkg_utils.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_scheduling.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/wingide.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/xmlrpc_server_example.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/crossmingw.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/metric_prefixes.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_thread_utils.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/load_env.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_math_utils.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/utils.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/forward_compatibility.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/configure.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_xmlrpc_utils.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/callbacks.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/complex_math.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/easy_profile.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_find_unused_imports.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_str_utils.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/mpi4py.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_topological_sort.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/assert_utils.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/table_utils.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/env_config.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/clear_paths.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/find_reference_cycles.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/option_parser.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/file_clutter.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_python_code_parsing.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/try_hello_world_c.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/pyplot.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/console_utils.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/python_code_parsing.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_easy_mp.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/smart_open.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/binary_search.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/runtime_utils.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_fully_buffered_timeout.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/cluster.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/libtbx_refresh.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_version.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/containers.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_utils.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_containers.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_easy_mp_state.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_object_oriented_patterns.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/cpp_function_name.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_easy_pickle.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/fastentrypoints.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/easy_run.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/introspection.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/progress.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_runtime_utils.py -> /<>/.pybuild/cpython3_3.12/build/libtbx copying libtbx/thread_utils.py -> /<>/.pybuild/cpython3_3.12/build/libtbx creating /<>/.pybuild/cpython3_3.12/build/omptbx copying omptbx/tst.py -> /<>/.pybuild/cpython3_3.12/build/omptbx copying omptbx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/omptbx creating /<>/.pybuild/cpython3_3.12/build/qttbx copying qttbx/phil.py -> /<>/.pybuild/cpython3_3.12/build/qttbx copying qttbx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/qttbx creating /<>/.pybuild/cpython3_3.12/build/gltbx copying gltbx/generate_fonts_ucs_cpp.py -> /<>/.pybuild/cpython3_3.12/build/gltbx copying gltbx/gl_managed.py -> /<>/.pybuild/cpython3_3.12/build/gltbx copying gltbx/wx_viewer.py -> /<>/.pybuild/cpython3_3.12/build/gltbx copying gltbx/generate_functions_bpl.py -> /<>/.pybuild/cpython3_3.12/build/gltbx copying gltbx/generate_defines_bpl.py -> /<>/.pybuild/cpython3_3.12/build/gltbx copying gltbx/fonts.py -> /<>/.pybuild/cpython3_3.12/build/gltbx copying gltbx/run_tests.py -> /<>/.pybuild/cpython3_3.12/build/gltbx copying gltbx/wx_ellipsoids_test.py -> /<>/.pybuild/cpython3_3.12/build/gltbx copying gltbx/wx_viewer_leapmotion.py -> /<>/.pybuild/cpython3_3.12/build/gltbx copying gltbx/quadrics.py -> /<>/.pybuild/cpython3_3.12/build/gltbx copying gltbx/viewer_utils.py -> /<>/.pybuild/cpython3_3.12/build/gltbx copying gltbx/util.py -> /<>/.pybuild/cpython3_3.12/build/gltbx copying gltbx/extract_opengl_specs.py -> /<>/.pybuild/cpython3_3.12/build/gltbx copying gltbx/gl.py -> /<>/.pybuild/cpython3_3.12/build/gltbx copying gltbx/tst_viewer_utils.py -> /<>/.pybuild/cpython3_3.12/build/gltbx copying gltbx/tst_ellipsoids.py -> /<>/.pybuild/cpython3_3.12/build/gltbx copying gltbx/images.py -> /<>/.pybuild/cpython3_3.12/build/gltbx copying gltbx/wx_motion_on_tab.py -> /<>/.pybuild/cpython3_3.12/build/gltbx copying gltbx/tst.py -> /<>/.pybuild/cpython3_3.12/build/gltbx copying gltbx/wx_cube.py -> /<>/.pybuild/cpython3_3.12/build/gltbx copying gltbx/glu.py -> /<>/.pybuild/cpython3_3.12/build/gltbx copying gltbx/wx_scene.py -> /<>/.pybuild/cpython3_3.12/build/gltbx copying gltbx/tst_fonts.py -> /<>/.pybuild/cpython3_3.12/build/gltbx copying gltbx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/gltbx copying gltbx/libtbx_refresh.py -> /<>/.pybuild/cpython3_3.12/build/gltbx copying gltbx/wx_viewers_images.py -> /<>/.pybuild/cpython3_3.12/build/gltbx copying gltbx/wx_viewer_example.py -> /<>/.pybuild/cpython3_3.12/build/gltbx creating /<>/.pybuild/cpython3_3.12/build/cootbx copying cootbx/hydrogens_button.py -> /<>/.pybuild/cpython3_3.12/build/cootbx copying cootbx/simple_zoom_list.py -> /<>/.pybuild/cpython3_3.12/build/cootbx copying cootbx/watch_file.py -> /<>/.pybuild/cpython3_3.12/build/cootbx copying cootbx/interactive_edit.py -> /<>/.pybuild/cpython3_3.12/build/cootbx copying cootbx/ligand_checklist.py -> /<>/.pybuild/cpython3_3.12/build/cootbx copying cootbx/validation_lists.py -> /<>/.pybuild/cpython3_3.12/build/cootbx copying cootbx/view_refinement.py -> /<>/.pybuild/cpython3_3.12/build/cootbx copying cootbx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cootbx copying cootbx/xmlrpc_server.py -> /<>/.pybuild/cpython3_3.12/build/cootbx creating /<>/.pybuild/cpython3_3.12/build/rstbx copying rstbx/run_tests.py -> /<>/.pybuild/cpython3_3.12/build/rstbx copying rstbx/utils.py -> /<>/.pybuild/cpython3_3.12/build/rstbx copying rstbx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/rstbx creating /<>/.pybuild/cpython3_3.12/build/serialtbx copying serialtbx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/serialtbx creating /<>/.pybuild/cpython3_3.12/build/smtbx/structure_factors copying smtbx/structure_factors/__init__.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/structure_factors creating /<>/.pybuild/cpython3_3.12/build/smtbx/stl copying smtbx/stl/map.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/stl copying smtbx/stl/__init__.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/stl creating /<>/.pybuild/cpython3_3.12/build/smtbx/ab_initio copying smtbx/ab_initio/charge_flipping.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/ab_initio copying smtbx/ab_initio/__init__.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/ab_initio creating /<>/.pybuild/cpython3_3.12/build/smtbx/regression copying smtbx/regression/tst_commandline_refine.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/regression copying smtbx/regression/tst_commandline_anomrefine.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/regression copying smtbx/regression/__init__.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/regression creating /<>/.pybuild/cpython3_3.12/build/smtbx/absolute_structure copying smtbx/absolute_structure/__init__.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/absolute_structure creating /<>/.pybuild/cpython3_3.12/build/smtbx/source_generators copying smtbx/source_generators/__init__.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/source_generators copying smtbx/source_generators/flex_fwd_h.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/source_generators creating /<>/.pybuild/cpython3_3.12/build/smtbx/refinement copying smtbx/refinement/least_squares.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/refinement copying smtbx/refinement/weighting_schemes.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/refinement copying smtbx/refinement/__init__.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/refinement creating /<>/.pybuild/cpython3_3.12/build/smtbx/array_family copying smtbx/array_family/__init__.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/array_family creating /<>/.pybuild/cpython3_3.12/build/smtbx/masks copying smtbx/masks/__init__.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/masks creating /<>/.pybuild/cpython3_3.12/build/smtbx/command_line copying smtbx/command_line/refine.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/command_line copying smtbx/command_line/absolute_structure.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/command_line copying smtbx/command_line/__init__.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/command_line copying smtbx/command_line/masks.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/command_line copying smtbx/command_line/benchmark_refinement.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/command_line copying smtbx/command_line/anom_refine.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/command_line creating /<>/.pybuild/cpython3_3.12/build/smtbx/structure_factors/direct copying smtbx/structure_factors/direct/__init__.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/structure_factors/direct creating /<>/.pybuild/cpython3_3.12/build/smtbx/ab_initio/tests copying smtbx/ab_initio/tests/tst_ab_initio_ext.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/ab_initio/tests copying smtbx/ab_initio/tests/tst_charge_flipping.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/ab_initio/tests copying smtbx/ab_initio/tests/__init__.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/ab_initio/tests creating /<>/.pybuild/cpython3_3.12/build/smtbx/regression/test_data copying smtbx/regression/test_data/__init__.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/regression/test_data creating /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/rigid.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/all.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/site.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/adp.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/fpfdp.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/occupancy.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/__init__.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints creating /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/restraints copying smtbx/refinement/restraints/origin_fixing_restraints.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/restraints copying smtbx/refinement/restraints/adp_restraints.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/restraints copying smtbx/refinement/restraints/__init__.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/restraints creating /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/geometrical copying smtbx/refinement/constraints/geometrical/all.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/geometrical copying smtbx/refinement/constraints/geometrical/hydrogens.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/geometrical copying smtbx/refinement/constraints/geometrical/__init__.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/geometrical creating /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/tst_reparametrisation.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/test_same_group.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/tst_lbfgs.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/test_rigid.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/test_occupancies.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/tst_constrained_structure.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/test_disorder.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/test_direction.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/__init__.py -> /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests creating /<>/.pybuild/cpython3_3.12/build/crys3d creating /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/preset_buttons.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/webbrowser_messenger_py3.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/HKLviewer.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/cmdlineframes.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/jsview_3d.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/default_user_preset_buttons.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/helpers.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/xtriage_runner.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/xtricorder_runner.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/webbrowser_messenger_py2.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/qt.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/hklview_frame.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/qt_chromium_check.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/display2.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/hklviewer_gui.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/__init__.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer creating /<>/.pybuild/cpython3_3.12/build/crys3d/regression copying crys3d/regression/tst_websocket.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/regression copying crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/regression copying crys3d/regression/tests_HKLviewer.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/regression copying crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/regression copying crys3d/regression/tst_hklinfo.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/regression copying crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/regression copying crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/regression copying crys3d/regression/__init__.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/regression creating /<>/.pybuild/cpython3_3.12/build/crys3d/programs copying crys3d/programs/__init__.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/programs copying crys3d/programs/HKLinfo.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/programs creating /<>/.pybuild/cpython3_3.12/build/crys3d/hklview copying crys3d/hklview/view_3d.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/hklview copying crys3d/hklview/view_2d.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/hklview copying crys3d/hklview/comparison.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/hklview copying crys3d/hklview/frames.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/hklview copying crys3d/hklview/__init__.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/hklview creating /<>/.pybuild/cpython3_3.12/build/crys3d/command_line copying crys3d/command_line/hklview.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/command_line copying crys3d/command_line/HKLviewer.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/command_line copying crys3d/command_line/model_viewer.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/command_line copying crys3d/command_line/visualize_r_factors.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/command_line copying crys3d/command_line/make_install_HKLviewer_ChimeraX.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/command_line copying crys3d/command_line/multiplicity_viewer.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/command_line copying crys3d/command_line/qttbx.view_structure.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/command_line copying crys3d/command_line/__init__.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/command_line copying crys3d/command_line/compare_datasets.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/command_line copying crys3d/command_line/HKLinfo.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/command_line creating /<>/.pybuild/cpython3_3.12/build/crys3d/qttbx copying crys3d/qttbx/xray_structure_viewer.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/qttbx copying crys3d/qttbx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/qttbx copying crys3d/qttbx/map_viewer.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/qttbx creating /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/chimeraX_wheel_src copying crys3d/hklviewer/chimeraX_wheel_src/tool.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/chimeraX_wheel_src copying crys3d/hklviewer/chimeraX_wheel_src/__init__.py -> /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/chimeraX_wheel_src creating /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_18_doc_programming_tips_2.py -> /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_py_from_html.py -> /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py -> /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_10_doc_programming_tips_1.py -> /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_19_doc_programming_tips_3.py -> /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_13_script_ideal_ss.py -> /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_14_script_lbfgs_no_curvature.py -> /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_2_doc_hlo_intro.py -> /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_12_script_compare_ss.py -> /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_16_script_lbfgs_with_curvature.py -> /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_4_doc_hlo_data_manager.py -> /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_1_template.py -> /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_5_doc_hlo_map_manager.py -> /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_3_doc_hlo_model_manager.py -> /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_8_doc_maps_intro.py -> /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_11_script_1.py -> /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/exercise.py -> /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_17_script_rfactors.py -> /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_15_doc_models_hierarchy.py -> /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_7_doc_low_flex_advanced.py -> /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_9_doc_maps_boxing.py -> /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression creating /<>/.pybuild/cpython3_3.12/build/cctbx_website/command_line copying cctbx_website/command_line/extract_script_from_html_cctbx_doc.py -> /<>/.pybuild/cpython3_3.12/build/cctbx_website/command_line copying cctbx_website/command_line/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx_website/command_line creating /<>/.pybuild/cpython3_3.12/build/cbflib_adaptbx/command_line copying cbflib_adaptbx/command_line/dump.py -> /<>/.pybuild/cpython3_3.12/build/cbflib_adaptbx/command_line copying cbflib_adaptbx/command_line/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cbflib_adaptbx/command_line creating /<>/.pybuild/cpython3_3.12/build/xfel creating /<>/.pybuild/cpython3_3.12/build/xfel/small_cell copying xfel/small_cell/small_cell.py -> /<>/.pybuild/cpython3_3.12/build/xfel/small_cell copying xfel/small_cell/powder_util.py -> /<>/.pybuild/cpython3_3.12/build/xfel/small_cell copying xfel/small_cell/solve_orientation.py -> /<>/.pybuild/cpython3_3.12/build/xfel/small_cell copying xfel/small_cell/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/small_cell copying xfel/small_cell/write_orientation_arrows.py -> /<>/.pybuild/cpython3_3.12/build/xfel/small_cell creating /<>/.pybuild/cpython3_3.12/build/xfel/mono_simulation copying xfel/mono_simulation/mono_treatment.py -> /<>/.pybuild/cpython3_3.12/build/xfel/mono_simulation copying xfel/mono_simulation/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/mono_simulation copying xfel/mono_simulation/max_like_pos_neg.py -> /<>/.pybuild/cpython3_3.12/build/xfel/mono_simulation creating /<>/.pybuild/cpython3_3.12/build/xfel/amo copying xfel/amo/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/amo creating /<>/.pybuild/cpython3_3.12/build/xfel/ui copying xfel/ui/phil_patch.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui copying xfel/ui/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui creating /<>/.pybuild/cpython3_3.12/build/xfel/cftbx copying xfel/cftbx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cftbx creating /<>/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/correction_vector_plot.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/cxi_cc.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/postrefinement_factory.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/integrate_image_api.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/completeness_plot.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/trumpet_plot.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/spectra_filter.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/display_powder_arcs.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/util.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/display_spots.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/strong_zulu.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/postrefinement_legacy_rs.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/data_utils.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/merging_utils.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/average_spots.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/postrefinement_hybrid_rs.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/postrefinement_updated_rs.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi creating /<>/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/split_detector.py -> /<>/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/image_pickle_locator.py -> /<>/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/mp.py -> /<>/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/dials_pickle_reader.py -> /<>/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/weather.py -> /<>/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/cctbx_xfel_installer.py -> /<>/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/drift.py -> /<>/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/dials_file_matcher.py -> /<>/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/show_spot_separation.py -> /<>/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/kapton_2019_correction_frame_frame_plugin.py -> /<>/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/reflection_length.py -> /<>/.pybuild/cpython3_3.12/build/xfel/util creating /<>/.pybuild/cpython3_3.12/build/xfel/euxfel copying xfel/euxfel/agipd_cxigeom2nexus.py -> /<>/.pybuild/cpython3_3.12/build/xfel/euxfel copying xfel/euxfel/agipd_from_defs.py -> /<>/.pybuild/cpython3_3.12/build/xfel/euxfel copying xfel/euxfel/write_composite_image.py -> /<>/.pybuild/cpython3_3.12/build/xfel/euxfel copying xfel/euxfel/read_geom.py -> /<>/.pybuild/cpython3_3.12/build/xfel/euxfel copying xfel/euxfel/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/euxfel creating /<>/.pybuild/cpython3_3.12/build/xfel/clustering copying xfel/clustering/simulate_partial_data.py -> /<>/.pybuild/cpython3_3.12/build/xfel/clustering copying xfel/clustering/cluster_groups.py -> /<>/.pybuild/cpython3_3.12/build/xfel/clustering copying xfel/clustering/api.py -> /<>/.pybuild/cpython3_3.12/build/xfel/clustering copying xfel/clustering/cluster.py -> /<>/.pybuild/cpython3_3.12/build/xfel/clustering copying xfel/clustering/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/clustering copying xfel/clustering/singleframe.py -> /<>/.pybuild/cpython3_3.12/build/xfel/clustering creating /<>/.pybuild/cpython3_3.12/build/xfel/graph_proc copying xfel/graph_proc/components.py -> /<>/.pybuild/cpython3_3.12/build/xfel/graph_proc copying xfel/graph_proc/parameter_optimizer.py -> /<>/.pybuild/cpython3_3.12/build/xfel/graph_proc copying xfel/graph_proc/multiproc_temp_parame_opt.py -> /<>/.pybuild/cpython3_3.12/build/xfel/graph_proc copying xfel/graph_proc/graph.py -> /<>/.pybuild/cpython3_3.12/build/xfel/graph_proc copying xfel/graph_proc/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/graph_proc creating /<>/.pybuild/cpython3_3.12/build/xfel/pal copying xfel/pal/jf4m_geom2nexus.py -> /<>/.pybuild/cpython3_3.12/build/xfel/pal copying xfel/pal/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/pal creating /<>/.pybuild/cpython3_3.12/build/xfel/vonHamos copying xfel/vonHamos/fit_3_gaussian.py -> /<>/.pybuild/cpython3_3.12/build/xfel/vonHamos copying xfel/vonHamos/test_3_gaussian.py -> /<>/.pybuild/cpython3_3.12/build/xfel/vonHamos copying xfel/vonHamos/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/vonHamos creating /<>/.pybuild/cpython3_3.12/build/xfel/lcls_api copying xfel/lcls_api/exercise_api.py -> /<>/.pybuild/cpython3_3.12/build/xfel/lcls_api copying xfel/lcls_api/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/lcls_api copying xfel/lcls_api/psana_cctbx.py -> /<>/.pybuild/cpython3_3.12/build/xfel/lcls_api creating /<>/.pybuild/cpython3_3.12/build/xfel/merging copying xfel/merging/refine.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging copying xfel/merging/absorption.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging copying xfel/merging/phil_validation.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging copying xfel/merging/general_fcalc.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging copying xfel/merging/predictions_to_edges.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging copying xfel/merging/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging creating /<>/.pybuild/cpython3_3.12/build/xfel/xpp copying xfel/xpp/simulate.py -> /<>/.pybuild/cpython3_3.12/build/xfel/xpp copying xfel/xpp/progress_utils.py -> /<>/.pybuild/cpython3_3.12/build/xfel/xpp copying xfel/xpp/isoform.py -> /<>/.pybuild/cpython3_3.12/build/xfel/xpp copying xfel/xpp/split_pickles.py -> /<>/.pybuild/cpython3_3.12/build/xfel/xpp copying xfel/xpp/progress_support.py -> /<>/.pybuild/cpython3_3.12/build/xfel/xpp copying xfel/xpp/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/xpp creating /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cspad_detector_statistics.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_pbs.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/convert_gain_map.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_index.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/view_pixel_histograms.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_pickle2cbf.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/xpp_progress_detail.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_lsf.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/fee_calibration.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/xpp_progress_bar.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/experiment_manager.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/make_mask.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_merge.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/xtc_process.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/trumpet_plots.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/xfel_process.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/find_highres_shots.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/fee_view.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_slaccalib2cbfheader.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/mpi_average.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cctbx_integration_pickle_viewer.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/convert_gain_map_cbf.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/metrology.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_cbfheader2slaccalib.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/xtc_dump.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/riso.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_parameters.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/filter_experiments_by_rmsd.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/quadrants.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/histogram_finalise.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/xpp_isoform.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/smooth_spectrum.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/print_pickle.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/or_mask.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_display_metrology.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_stream_to_pickle.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/stills_merge.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_psana.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cspad_circular_gain_mask.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/frame_extractor.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/xes_histograms.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/weather.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/get_next_trial_id.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/xpp_simulate.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/plot_to_subpixel.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/drift.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cbf_average.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/calc_gain_ratio.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/striping.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/launch_fxs.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/FEE_average_plot.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/xes_finalise.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_cspad_pinwheel.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/experiment_residuals.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_xmerge.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/detector_residuals.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/show_spot_separation.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/h5_average.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/overlay_spectra.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/runs_sentinel.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/experiment_json_to_cbf_def.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_generate_circular_gain_mask.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cspad_detector_congruence.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cspad_cbf_metrology.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/brehm_diederichs.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_detector_format_versions.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/upload_mtz.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_xtc_process.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/trial_stats.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/monitor_trials.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/jungfrau_metrics.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/subtract_background.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/frame_unpickler.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/beamcenter.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/list_db_metadata.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_plotcv.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/monitor_detectors.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_spots.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_mpi_submit.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cspad_detector_congruence2.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/make_mar_mask.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/jobs_sentinel.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_apply_metrology.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cspad_detector_shifts.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_view.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_optical2cbfheader.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_diff.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/make_dials_mask.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/recompute_mosaicity.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/auto_submit.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/radial_average.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/quadrants_cbf.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/postrefine.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_calibdir2cbfheader.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_pyana.py -> /<>/.pybuild/cpython3_3.12/build/xfel/command_line creating /<>/.pybuild/cpython3_3.12/build/xfel/swissfel copying xfel/swissfel/sync_jf16m_geometry.py -> /<>/.pybuild/cpython3_3.12/build/xfel/swissfel copying xfel/swissfel/jf16m_cxigeom2nexus.py -> /<>/.pybuild/cpython3_3.12/build/xfel/swissfel copying xfel/swissfel/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/swissfel creating /<>/.pybuild/cpython3_3.12/build/xfel/metrology copying xfel/metrology/mark1.py -> /<>/.pybuild/cpython3_3.12/build/xfel/metrology copying xfel/metrology/mark0.py -> /<>/.pybuild/cpython3_3.12/build/xfel/metrology copying xfel/metrology/flatfile.py -> /<>/.pybuild/cpython3_3.12/build/xfel/metrology copying xfel/metrology/mark3.py -> /<>/.pybuild/cpython3_3.12/build/xfel/metrology copying xfel/metrology/quadrant.py -> /<>/.pybuild/cpython3_3.12/build/xfel/metrology copying xfel/metrology/mark10.py -> /<>/.pybuild/cpython3_3.12/build/xfel/metrology copying xfel/metrology/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/metrology copying xfel/metrology/panel_fitting.py -> /<>/.pybuild/cpython3_3.12/build/xfel/metrology creating /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/small_cell_index.py -> /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/xfel_small_cell_process.py -> /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/cake_plot.py -> /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/cake_plot_prep.py -> /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/candidate_cells.py -> /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/small_cell_process.py -> /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/powder_from_spots.py -> /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line creating /<>/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/mpi_fxs_calib.py -> /<>/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/pnccd_tbx.py -> /<>/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/fxs.py -> /<>/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/pnccd_hit.py -> /<>/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/mpi_fxs_index.py -> /<>/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/mpi_fxs_mask.py -> /<>/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/mpi_fxs_c2.py -> /<>/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/mpi_fxs_bg.py -> /<>/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/mpi_fxs_launch.py -> /<>/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana creating /<>/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/run_stats_plotter.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/xfel_gui_plotter.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/spotfinder_plotter.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/submission_tracker.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/spotfinder_scraper.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/xfel_gui_controls.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/timeit.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/xfel_gui_init.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/xfel_gui_dialogs.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/tooltips.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/components creating /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/plot_run_stats_in_gui.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/ui_server.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/plot_reflection_stats.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/plot_run_stats.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/plot_run_stats_from_experiments.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/plot_isoform_cloud.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/print_run_stats.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/plot_uc_cloud.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/plot_uc_cloud_from_experiments.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/xfel_gui_launch.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/get_hit_timestamps.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/plot_spotfinder_stats_in_gui.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line creating /<>/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/experiment.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/trial.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/tag.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/frame_logging.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/run.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/job.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/merging_log_scraper.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/task.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/dxtbx_db.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/dataset.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/rungroup.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/stats.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/xfel_db.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/db creating /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/cfgs copying xfel/ui/db/cfgs/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/cfgs copying xfel/ui/db/cfgs/shifter_templates.py -> /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/cfgs creating /<>/.pybuild/cpython3_3.12/build/xfel/cftbx/detector copying xfel/cftbx/detector/metrology2phil.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cftbx/detector copying xfel/cftbx/detector/cspad_cbf_tbx.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cftbx/detector copying xfel/cftbx/detector/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cftbx/detector creating /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_hdf5.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_ledge.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_dump.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_daq_status.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/average_tbx.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/common_mode.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_average.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/parse_calib.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/pixel_histograms.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_illumination_filter.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/histogram_finalise.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_radial_average.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_view.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/display_calib.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_event_code.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/xes_histograms.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_event_info.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_filter.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_xes.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/xes_finalise.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_image_dict.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_hitfind.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_spectrum_filter.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/hitfinder_tbx.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/cspad_tbx.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/xes_faster_histograms.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_dump_bitmap.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_param.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/rayonix_tbx.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_mar.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_pulnix_dump.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana creating /<>/.pybuild/cpython3_3.12/build/xfel/cxi/clustering copying xfel/cxi/clustering/test_cluster.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/clustering copying xfel/cxi/clustering/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/clustering copying xfel/cxi/clustering/Cluster.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/clustering copying xfel/cxi/clustering/SingleFrame.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/clustering creating /<>/.pybuild/cpython3_3.12/build/xfel/cxi/gfx copying xfel/cxi/gfx/status_plot.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/gfx copying xfel/cxi/gfx/wx_detectors.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/gfx copying xfel/cxi/gfx/trials_plot.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/gfx copying xfel/cxi/gfx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/gfx creating /<>/.pybuild/cpython3_3.12/build/xfel/cxi/command_line copying xfel/cxi/command_line/einsle.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/command_line copying xfel/cxi/command_line/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/cxi/command_line creating /<>/.pybuild/cpython3_3.12/build/xfel/clustering/command_line copying xfel/clustering/command_line/cluster_unit_cell.py -> /<>/.pybuild/cpython3_3.12/build/xfel/clustering/command_line copying xfel/clustering/command_line/cluster_intensity_statistics.py -> /<>/.pybuild/cpython3_3.12/build/xfel/clustering/command_line copying xfel/clustering/command_line/cluster_per_frame_wilson.py -> /<>/.pybuild/cpython3_3.12/build/xfel/clustering/command_line copying xfel/clustering/command_line/cluster_42.py -> /<>/.pybuild/cpython3_3.12/build/xfel/clustering/command_line copying xfel/clustering/command_line/cluster_visualise_orientations.py -> /<>/.pybuild/cpython3_3.12/build/xfel/clustering/command_line copying xfel/clustering/command_line/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/clustering/command_line creating /<>/.pybuild/cpython3_3.12/build/xfel/merging/application copying xfel/merging/application/worker.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application copying xfel/merging/application/reflection_table_utils.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application copying xfel/merging/application/mpi_helper.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application copying xfel/merging/application/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application copying xfel/merging/application/mpi_logger.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application creating /<>/.pybuild/cpython3_3.12/build/xfel/merging/database copying xfel/merging/database/merging_database.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/database copying xfel/merging/database/merging_database_flex.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/database copying xfel/merging/database/merging_database_fs.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/database copying xfel/merging/database/merging_database_sqlite3.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/database copying xfel/merging/database/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/database creating /<>/.pybuild/cpython3_3.12/build/xfel/merging/model copying xfel/merging/model/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/model creating /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms copying xfel/merging/algorithms/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms creating /<>/.pybuild/cpython3_3.12/build/xfel/merging/report copying xfel/merging/report/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/report creating /<>/.pybuild/cpython3_3.12/build/xfel/merging/command_line copying xfel/merging/command_line/merge.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/command_line copying xfel/merging/command_line/mpi_integrate.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/command_line copying xfel/merging/command_line/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/command_line creating /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/integrate copying xfel/merging/application/integrate/factory.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/integrate copying xfel/merging/application/integrate/integrate.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/integrate copying xfel/merging/application/integrate/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/integrate creating /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/input copying xfel/merging/application/input/file_lister.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/input copying xfel/merging/application/input/file_loader.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/input copying xfel/merging/application/input/file_load_calculator.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/input copying xfel/merging/application/input/factory.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/input copying xfel/merging/application/input/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/input creating /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/output copying xfel/merging/application/output/factory.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/output copying xfel/merging/application/output/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/output creating /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/scale copying xfel/merging/application/scale/experiment_scaler.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/scale copying xfel/merging/application/scale/factory.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/scale copying xfel/merging/application/scale/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/scale creating /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/tdata copying xfel/merging/application/tdata/cell_listing.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/tdata copying xfel/merging/application/tdata/factory.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/tdata copying xfel/merging/application/tdata/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/tdata creating /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/filter copying xfel/merging/application/filter/factory.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/filter copying xfel/merging/application/filter/reflection_filter.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/filter copying xfel/merging/application/filter/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/filter copying xfel/merging/application/filter/experiment_filter.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/filter creating /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/utils copying xfel/merging/application/utils/memory_usage.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/utils copying xfel/merging/application/utils/data_counter.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/utils copying xfel/merging/application/utils/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/utils creating /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/model copying xfel/merging/application/model/factory.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/model copying xfel/merging/application/model/crystal_model.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/model copying xfel/merging/application/model/resolution_binner.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/model copying xfel/merging/application/model/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/model creating /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/validation copying xfel/merging/application/validation/application.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/validation copying xfel/merging/application/validation/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/validation creating /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/group copying xfel/merging/application/group/group_reflections.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/group copying xfel/merging/application/group/factory.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/group copying xfel/merging/application/group/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/group creating /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/phil copying xfel/merging/application/phil/phil.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/phil copying xfel/merging/application/phil/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/phil creating /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine copying xfel/merging/application/postrefine/postrefinement_rs.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine copying xfel/merging/application/postrefine/factory.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine copying xfel/merging/application/postrefine/postrefinement_rs2.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine copying xfel/merging/application/postrefine/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine creating /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/lunus copying xfel/merging/application/lunus/lunus.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/lunus copying xfel/merging/application/lunus/factory.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/lunus copying xfel/merging/application/lunus/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/lunus creating /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/merge copying xfel/merging/application/merge/merger.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/merge copying xfel/merging/application/merge/factory.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/merge copying xfel/merging/application/merge/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/merge creating /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/errors copying xfel/merging/application/errors/error_modifier_sr.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/errors copying xfel/merging/application/errors/error_modifier_ha14.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/errors copying xfel/merging/application/errors/factory.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/errors copying xfel/merging/application/errors/error_modifier_ev11.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/errors copying xfel/merging/application/errors/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/errors creating /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/compare_results.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/cosym_tranch_align.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/reindex_cosym.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/factory.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/token_passing_left_right.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/reindex_to_abc.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/cosym.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/df_cosym.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/reindex_to_reference.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/polarization.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/aux_cosym.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify creating /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/balance copying xfel/merging/application/balance/factory.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/balance copying xfel/merging/application/balance/load_balancer.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/balance copying xfel/merging/application/balance/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/balance creating /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/intensity_resolution_statistics.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/factory.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/intensity_histogram.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/experiment_resolution_statistics.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/beam_statistics.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/unit_cell_statistics.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics creating /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/postrefine copying xfel/merging/algorithms/postrefine/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/postrefine creating /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/error_modeler_base.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/sdfac_propagate.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/errors_from_residuals.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/sdfac_refine.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/sdfac_refine_levmar.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/sdfac_refine_lbfgs.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/reduced_chi_squared.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/sdfac_propagate_and_refine.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model creating /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/statistics copying xfel/merging/algorithms/statistics/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/statistics creating /<>/.pybuild/cpython3_3.12/build/xfel/merging/report/graphs copying xfel/merging/report/graphs/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/report/graphs creating /<>/.pybuild/cpython3_3.12/build/xfel/merging/report/tables copying xfel/merging/report/tables/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/merging/report/tables creating /<>/.pybuild/cpython3_3.12/build/xfel/metrology/legacy_scale copying xfel/metrology/legacy_scale/__init__.py -> /<>/.pybuild/cpython3_3.12/build/xfel/metrology/legacy_scale creating /<>/.pybuild/cpython3_3.12/build/fable/command_line copying fable/command_line/show_calls.py -> /<>/.pybuild/cpython3_3.12/build/fable/command_line copying fable/command_line/insert_write_at_start_of_each_procedure.py -> /<>/.pybuild/cpython3_3.12/build/fable/command_line copying fable/command_line/cout.py -> /<>/.pybuild/cpython3_3.12/build/fable/command_line copying fable/command_line/split.py -> /<>/.pybuild/cpython3_3.12/build/fable/command_line copying fable/command_line/read.py -> /<>/.pybuild/cpython3_3.12/build/fable/command_line copying fable/command_line/__init__.py -> /<>/.pybuild/cpython3_3.12/build/fable/command_line copying fable/command_line/fem_include_search_paths.py -> /<>/.pybuild/cpython3_3.12/build/fable/command_line creating /<>/.pybuild/cpython3_3.12/build/scitbx/stl copying scitbx/stl/map.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/stl copying scitbx/stl/tst_set.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/stl copying scitbx/stl/tst_map.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/stl copying scitbx/stl/vector.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/stl copying scitbx/stl/tst_vector.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/stl copying scitbx/stl/__init__.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/stl copying scitbx/stl/set.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/stl creating /<>/.pybuild/cpython3_3.12/build/scitbx/lstbx copying scitbx/lstbx/normal_eqns_solving.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/lstbx copying scitbx/lstbx/normal_eqns.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/lstbx copying scitbx/lstbx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/lstbx creating /<>/.pybuild/cpython3_3.12/build/scitbx/glmtbx copying scitbx/glmtbx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/glmtbx creating /<>/.pybuild/cpython3_3.12/build/scitbx/matrix copying scitbx/matrix/row_echelon.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/matrix copying scitbx/matrix/__init__.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/matrix creating /<>/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/lbfgs_recipe.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/rigid_body_refinement_core.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/chebyshev_lsq_example.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/integrating_a_weighted_sinc_function.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/functions.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/principal_axes_of_inertia.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/immoptibox_ports.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/minimizer_comparisons.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/lbfgs_linear_least_squares_fit.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/flex_array_loops.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/__init__.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/flex_grid.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/bootstrap.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/examples creating /<>/.pybuild/cpython3_3.12/build/scitbx/sparse copying scitbx/sparse/__init__.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/sparse creating /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body copying scitbx/rigid_body/tst.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body copying scitbx/rigid_body/__init__.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body creating /<>/.pybuild/cpython3_3.12/build/scitbx/linalg copying scitbx/linalg/svd.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/linalg copying scitbx/linalg/ext.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/linalg copying scitbx/linalg/householder.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/linalg copying scitbx/linalg/__init__.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/linalg copying scitbx/linalg/eigensystem.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/linalg creating /<>/.pybuild/cpython3_3.12/build/scitbx/graph copying scitbx/graph/test_cases_tardy_pdb.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/graph copying scitbx/graph/tst_tardy_tree.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/graph copying scitbx/graph/tst_tardy_tree_find_paths.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/graph copying scitbx/graph/rigidity_matrix_symbolic.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/graph copying scitbx/graph/utils.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/graph copying scitbx/graph/rigidity.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/graph copying scitbx/graph/tardy_tree.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/graph copying scitbx/graph/tst_rigidity.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/graph copying scitbx/graph/__init__.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/graph copying scitbx/graph/tst_utils.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/graph creating /<>/.pybuild/cpython3_3.12/build/scitbx/random copying scitbx/random/__init__.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/random creating /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators copying scitbx/source_generators/utils.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators copying scitbx/source_generators/lbfgs_fem.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators copying scitbx/source_generators/__init__.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators copying scitbx/source_generators/flex_fwd_h.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators creating /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin copying scitbx/dtmin/refinebase.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin copying scitbx/dtmin/optional.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin copying scitbx/dtmin/min_logging.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin copying scitbx/dtmin/compulsory.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin copying scitbx/dtmin/minimizer.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin copying scitbx/dtmin/bounds.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin copying scitbx/dtmin/reparams.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin copying scitbx/dtmin/realsymmetricpseudoinverse.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin copying scitbx/dtmin/twisted_gaussian.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin copying scitbx/dtmin/__init__.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin copying scitbx/dtmin/auxiliary.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin creating /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/tst_2d_zernike.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/tst_multivariate_moments.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/sphere_sphere_intersection.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/tst_zernike_mom.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/zernike_align_fft.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/incremental_SO3_sampling.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/besselk.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/tst_undirected_graph.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/fliege_mayer_900_ylm.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/tst_bessel_zeros.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/chebyshev_lsq_fit.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/clustering.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/lefebvre.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/so3_lie_algebra.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/minimum_covering_ellipsoid.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/des_3_100_13.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/tst_so3_lie_algebra.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/periodogram.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/spe.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/des_3_240_21.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/euler_angles.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/fliege_mayer_400.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/farey.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/distributions.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/curve_fitting.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/breakpoint.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/ext.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/fliege_mayer_900.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/tst_zernike.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/multiple_superposition.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/sieve_of_eratosthenes.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/superpose.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/undirected_graph.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/fit_quadratic_function.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/scale_curves.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/fit_peak.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/cubic_spline.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/gumbel.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/gaussian.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/__init__.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/gaussian_fit.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math creating /<>/.pybuild/cpython3_3.12/build/scitbx/graphics_utils copying scitbx/graphics_utils/tst.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/graphics_utils copying scitbx/graphics_utils/__init__.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/graphics_utils creating /<>/.pybuild/cpython3_3.12/build/scitbx/suffixtree copying scitbx/suffixtree/single.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/suffixtree copying scitbx/suffixtree/__init__.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/suffixtree creating /<>/.pybuild/cpython3_3.12/build/scitbx/array_family copying scitbx/array_family/shared.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/array_family copying scitbx/array_family/flex.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/array_family copying scitbx/array_family/__init__.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/array_family creating /<>/.pybuild/cpython3_3.12/build/scitbx/lbfgs copying scitbx/lbfgs/tst_mpi_split_evaluator.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/lbfgs copying scitbx/lbfgs/tst_lbfgs_fem.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/lbfgs copying scitbx/lbfgs/tst_func_free_line_search.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/lbfgs copying scitbx/lbfgs/tst_curvatures.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/lbfgs copying scitbx/lbfgs/tst_ext.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/lbfgs copying scitbx/lbfgs/__init__.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/lbfgs creating /<>/.pybuild/cpython3_3.12/build/scitbx/wigner copying scitbx/wigner/tst_wigner3j.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/wigner copying scitbx/wigner/__init__.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/wigner creating /<>/.pybuild/cpython3_3.12/build/scitbx/iso_surface copying scitbx/iso_surface/tst_iso_surface.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/iso_surface copying scitbx/iso_surface/__init__.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/iso_surface creating /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/signal_utils.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/tst_random_transform.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/robust_statistics.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/command_line.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/random_utils.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/tst_graph.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/misc.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/dicts.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/tst_robust.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/graph_tools.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/random_transform.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/__init__.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils creating /<>/.pybuild/cpython3_3.12/build/scitbx/boost_python copying scitbx/boost_python/__init__.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/boost_python creating /<>/.pybuild/cpython3_3.12/build/scitbx/stdlib copying scitbx/stdlib/__init__.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/stdlib creating /<>/.pybuild/cpython3_3.12/build/scitbx/lstbx/tests copying scitbx/lstbx/tests/tst_normal_equations.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/lstbx/tests copying scitbx/lstbx/tests/test_problems.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/lstbx/tests copying scitbx/lstbx/tests/__init__.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/lstbx/tests creating /<>/.pybuild/cpython3_3.12/build/scitbx/examples/bevington copying scitbx/examples/bevington/silver.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/examples/bevington copying scitbx/examples/bevington/__init__.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/examples/bevington creating /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_singular.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_joint_lib.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_free_motion_hard.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_molecules.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/free_motion_reference_impl.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/wx_free_motion.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_featherstone.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/joint_lib.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/test_simulation.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/wx_molecules.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/utils.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_spherical_refinement.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/wx_joint_lib.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/featherstone.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/test_utils.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/__init__.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_free_motion.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto creating /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/wx_tardy.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/tst_energy_plots.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/tardy.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/tst_tardy.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/joint_lib.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/body_lib.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/spatial_lib.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/featherstone.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/tst_basic.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/__init__.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/make_bundles.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence creating /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_reductions.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_operator_traits_builtin.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/operator_functor_info.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_all.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_algebras.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_operator_functors.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/__init__.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_apply.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_std_imports.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family creating /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_r3_rotation.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_gaussian.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_curve_fitting.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_resample.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_weighted_correlation.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_error_propagation_matrix_inverse.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_fit_peak.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_fit_quadratic_function.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_uniform_rotation_matrix.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_minimum_covering_ellipsoid.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_cubic_equation.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_halton.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_math.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_euler_angles.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_periodogram.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_gaussian_fit_1d_analytical.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_tetrahedron.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_exp_functions.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_orthonormal_basis.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_g_function.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_bessel.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_quadrature.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_angle_derivative.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/__init__.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_dmatrix.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_similarity_indices.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_superpose.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_clustering.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_line_search.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_gcd.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests creating /<>/.pybuild/cpython3_3.12/build/scitbx/math/boost_python copying scitbx/math/boost_python/__init__.py -> /<>/.pybuild/cpython3_3.12/build/scitbx/math/boost_python creating /<>/.pybuild/cpython3_3.12/build/spotfinder/math_support copying spotfinder/math_support/sphere_formulae.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/math_support copying spotfinder/math_support/__init__.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/math_support creating /<>/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/adsc_client.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/spotfinder_server_read_file.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/mp_spotfinder_server_read_file.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/pilatus_client.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/specific_client_example.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/multipart_encoder.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/general_client_example.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/spotfinder_server_client_push.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/bcsb_client_example.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/apache_bcsb.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/apache_utils.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/apache.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/mp_spotfinder_server_is_alive.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/__init__.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/thin_client.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/apache_dials.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/servers creating /<>/.pybuild/cpython3_3.12/build/spotfinder/dxtbx_toolbox copying spotfinder/dxtbx_toolbox/practical_heuristics.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/dxtbx_toolbox copying spotfinder/dxtbx_toolbox/__init__.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/dxtbx_toolbox creating /<>/.pybuild/cpython3_3.12/build/spotfinder/core_toolbox copying spotfinder/core_toolbox/close_spots_detail.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/core_toolbox copying spotfinder/core_toolbox/__init__.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/core_toolbox creating /<>/.pybuild/cpython3_3.12/build/spotfinder/array_family copying spotfinder/array_family/flex.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/array_family copying spotfinder/array_family/__init__.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/array_family creating /<>/.pybuild/cpython3_3.12/build/spotfinder/command_line copying spotfinder/command_line/mp_spotfinder_server_read_file.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/command_line copying spotfinder/command_line/sweep_strength.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/command_line copying spotfinder/command_line/image_viewer.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/command_line copying spotfinder/command_line/signal_strength.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/command_line copying spotfinder/command_line/find_active_area.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/command_line copying spotfinder/command_line/__init__.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/command_line copying spotfinder/command_line/thin_client.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/command_line creating /<>/.pybuild/cpython3_3.12/build/spotfinder/diffraction copying spotfinder/diffraction/geometry.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/diffraction copying spotfinder/diffraction/imagefiles.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/diffraction copying spotfinder/diffraction/__init__.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/diffraction creating /<>/.pybuild/cpython3_3.12/build/spotfinder/applications copying spotfinder/applications/wrappers.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/applications copying spotfinder/applications/practical_heuristics.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/applications copying spotfinder/applications/image_viewer.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/applications copying spotfinder/applications/stats_distl.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/applications copying spotfinder/applications/signal_strength.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/applications copying spotfinder/applications/__init__.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/applications creating /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel copying spotfinder/applications/xfel/correction_vector_plot.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel copying spotfinder/applications/xfel/cxi_run3.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel copying spotfinder/applications/xfel/cxi_phil.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel copying spotfinder/applications/xfel/__init__.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel creating /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx copying spotfinder/applications/heuristic_tbx/ice2.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx copying spotfinder/applications/heuristic_tbx/method2_resolution.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx copying spotfinder/applications/heuristic_tbx/ice_nztt.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx copying spotfinder/applications/heuristic_tbx/spotreporter.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx copying spotfinder/applications/heuristic_tbx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx creating /<>/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx copying annlib_adaptbx/annlib_adaptbx/self_match.py -> /<>/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx copying annlib_adaptbx/annlib_adaptbx/sample.py -> /<>/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx copying annlib_adaptbx/annlib_adaptbx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx creating /<>/.pybuild/cpython3_3.12/build/annlib_adaptbx/source_generators copying annlib_adaptbx/source_generators/generate_all.py -> /<>/.pybuild/cpython3_3.12/build/annlib_adaptbx/source_generators copying annlib_adaptbx/source_generators/__init__.py -> /<>/.pybuild/cpython3_3.12/build/annlib_adaptbx/source_generators creating /<>/.pybuild/cpython3_3.12/build/simtbx/gpu copying simtbx/gpu/tst_gpu_multisource_background.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/gpu copying simtbx/gpu/tst_shoeboxes.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/gpu copying simtbx/gpu/tst_exafel_api.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/gpu copying simtbx/gpu/__init__.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/gpu creating /<>/.pybuild/cpython3_3.12/build/simtbx/modeling copying simtbx/modeling/forward_models.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/modeling copying simtbx/modeling/predictions.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/modeling copying simtbx/modeling/FormatHDF5AttributeGeometry.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/modeling copying simtbx/modeling/__init__.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/modeling creating /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_input.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_gui_dialogs.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_nanoBragg_mosaic.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_multisource_background.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_nanoBragg_cbf_write.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_beam.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_gui_frames.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_nanoBragg_minimal.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_nanoBragg_multipanel.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_threads.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/utils.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_anisotropic_mosaicity.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_crystal.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_gui_init.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_gaussian_mosaicity.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/__init__.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/anisotropic_mosaicity.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_gaussian_mosaicity2.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_nanoBragg_pilatus.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_gauss_argchk.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_nanoBragg_basic.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/sim_data.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg creating /<>/.pybuild/cpython3_3.12/build/simtbx/pixel copying simtbx/pixel/__init__.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/pixel creating /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/parameter_errors.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/stage_two_utils.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/hopper_ensemble_utils.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/phil.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/utils.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/hopper_io.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/psf.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/hopper_utils.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/ensemble_refine_launcher.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/prep_stage2_input.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/device.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/attr_list.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/__init__.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/mpi_logger.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg creating /<>/.pybuild/cpython3_3.12/build/simtbx/kokkos copying simtbx/kokkos/tst_kokkos_lib.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/kokkos copying simtbx/kokkos/__init__.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/kokkos creating /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners copying simtbx/diffBragg/refiners/base_refiner.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners copying simtbx/diffBragg/refiners/stage_two_refiner.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners copying simtbx/diffBragg/refiners/parameters.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners copying simtbx/diffBragg/refiners/__init__.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners creating /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems copying simtbx/diffBragg/refiners/crystal_systems/manager.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems copying simtbx/diffBragg/refiners/crystal_systems/monoclinic.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems copying simtbx/diffBragg/refiners/crystal_systems/tetragonal.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems copying simtbx/diffBragg/refiners/crystal_systems/orthorhombic.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems copying simtbx/diffBragg/refiners/crystal_systems/hexagonal.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems copying simtbx/diffBragg/refiners/crystal_systems/__init__.py -> /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems creating /<>/.pybuild/cpython3_3.12/build/wxtbx/reports copying wxtbx/reports/blast.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/reports copying wxtbx/reports/__init__.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/reports copying wxtbx/reports/pdb_symmetry.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/reports creating /<>/.pybuild/cpython3_3.12/build/wxtbx/plots copying wxtbx/plots/molprobity.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/plots copying wxtbx/plots/emringer.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/plots copying wxtbx/plots/__init__.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/plots creating /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/loggraph.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/xtriage.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/inspect_r_free_flags.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/anomalous_differences_histogram.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/pdb_statistics.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/wxpython.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/plot_anomalous_scattering.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/show_file_info.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/b_plot.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/__init__.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/plan_sad_experiment.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/pdb_editor.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line creating /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/intctrl.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/choice_multi.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/ints.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/numbers.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/strctrl.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/tree.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/symop.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/choice.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/text_base.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/space_group.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/array_label.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/path.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/boolctrl.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/floatctrl.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/misc_ctrls.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/simple_dialogs.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/tribool.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/strings.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/__init__.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/floats.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/unit_cell.py -> /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls creating /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/graph copying boost_adaptbx/graph/graph_structure_comparison.py -> /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/graph copying boost_adaptbx/graph/maximum_clique.py -> /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/graph copying boost_adaptbx/graph/utility.py -> /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/graph copying boost_adaptbx/graph/connected_component_algorithm.py -> /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/graph copying boost_adaptbx/graph/metric.py -> /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/graph copying boost_adaptbx/graph/breadth_first_search.py -> /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/graph copying boost_adaptbx/graph/minimum_cut_enumerate.py -> /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/graph copying boost_adaptbx/graph/min_cut_max_flow.py -> /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/graph copying boost_adaptbx/graph/clustering_algorithm.py -> /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/graph copying boost_adaptbx/graph/__init__.py -> /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/graph creating /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/boost copying boost_adaptbx/boost/optional.py -> /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/boost copying boost_adaptbx/boost/tuple.py -> /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/boost copying boost_adaptbx/boost/std_pair.py -> /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/boost copying boost_adaptbx/boost/rational.py -> /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/boost copying boost_adaptbx/boost/python.py -> /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/boost copying boost_adaptbx/boost/__init__.py -> /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/boost creating /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/double_overflow.py -> /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/show_platform_info.py -> /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/inexact.py -> /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py -> /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/lcm.py -> /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/divide_by_zero.py -> /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/show_environ_usage.py -> /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/int_overflow.py -> /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/gcd.py -> /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/__init__.py -> /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/segmentation_fault.py -> /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line creating /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/view_fft_map.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/space_subgroups.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/neutron_structure_factors.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/unit_cell_refinement.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/tst_phase_o_phrenia.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/tst_exp_i_alpha_derivatives.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/all_axes.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/ccp4_map.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/miller_transform.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/fft_map_electron_density_around_atom.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/lebedev_2005_perturbation.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/reduced_cell_two_folds.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/exp_i_alpha_derivatives.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/cr2o3_primitive_cell.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/tst_structure_factor_derivatives_2.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/g_exp_i_alpha_derivatives.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/tst_space_subgroups.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/analyze_adp.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/structure_factor_derivatives_2.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/structure_factor_derivatives_3.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/maximum_subgroups.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/f_model_example.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/steve_collins.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/change_hand_p31.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/list_non_principal_continuous_shifts.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/symops_530.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/tst_structure_factor_derivatives_4.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/le_page_1982_vs_lebedev_2005.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/space_group_matrices.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/map_skewness.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/structure_factor_derivatives.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/sub_group_graph.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/trigonal_r_vs_tetragonal_i.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/miller_common_sets.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/tst_g_exp_i_alpha_derivatives.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/find_distances_using_cpp_objects.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/find_sys_abs_equiv_space_groups.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/site_symmetry_constraints.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/random_puckers.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/unit_cell_minimizers.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/tst_structure_factor_derivatives_3.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/hirshfeld_test.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/location_part.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/g_exp_i_partial_derivatives.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/random_f_calc.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/cr2o3_consistency_checks.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/structure_factor_derivatives_4.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/adp_symmetry_constraints.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/convert_ccp4_symop_lib.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/tst_structure_factor_derivatives.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/site_symmetry_table.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/quartz_structure.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/getting_started.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/phase_o_phrenia.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples creating /<>/.pybuild/cpython3_3.12/build/cctbx/covariance copying cctbx/covariance/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/covariance creating /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/real_space_refinement_simple.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/auto_sharpen.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/segment_and_split_map.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_interpolation_2.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/box.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/refine_sharpening.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/mem.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_atom_curves.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_bcr.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/resolution_from_map_and_model.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/prepare_map_for_docking.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/minimization.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_resolution_from_map_and_model.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/mask.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_atom_radius_as_central_peak_width.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_interpolation.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/refine_scales_errors.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_loft.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_target_and_gradients.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/map_symmetry.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_ccp.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_get_percentile_cutoffs.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_asymmetric_map.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_real_space_refinement_simple.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_peak_volume_estimate.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_map_peak_3d_as_2d.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_mask.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx creating /<>/.pybuild/cpython3_3.12/build/cctbx/neutron copying cctbx/neutron/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/neutron creating /<>/.pybuild/cpython3_3.12/build/cctbx/xray copying cctbx/xray/scatterer.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/xray copying cctbx/xray/minimization.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/xray copying cctbx/xray/target_functors.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/xray copying cctbx/xray/weighting_schemes.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/xray copying cctbx/xray/ext.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/xray copying cctbx/xray/observation_types.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/xray copying cctbx/xray/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/xray copying cctbx/xray/structure.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/xray creating /<>/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/fmt_utils.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/debug_utils.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/tst_cns_epsilon.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/structure_factor_utils.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/approx_amplitude_vs_resolution.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/space_group_option_parser.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/direct_or_fft.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/make_settings.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/random_structure.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/github.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/electron_density_sampling.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/run_shelx76.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/tst_cns_hl.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/create_models_or_maps.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/make_cns_input.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/cns_density_modification.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/run_shelx.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/development creating /<>/.pybuild/cpython3_3.12/build/cctbx/macro_mol copying cctbx/macro_mol/rotation_parameters.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/macro_mol copying cctbx/macro_mol/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/macro_mol creating /<>/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/reindex.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/tst_super_cell.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/tst_distance_based_connectivity.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/burzlaff_zimmermann_dewolff.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/super_cell.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/find_best_cell.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/distance_based_connectivity.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/direct_space_asu.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/tst_ext.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/close_packing.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/coordination_sequences.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/crystal creating /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_geometry_restraints.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_geometry_restraints_lbfgs.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_grouped_data.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_diffuse.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_miller.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_miller_fft_map.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_reciprocal_space_asu.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_show_cosets.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_pointgroup_tools.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_r_free_utils.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_loc_res.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_fast_nv1995.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_maptbx_mask.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_pair_asu_table.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_amplitude_normalisation.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_xray.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_change_basis.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_space_group_type_tidy_cb_op_t.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_wilson_plot.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_sgtbx.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_triplet_generator.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_fcalc_fft_stability.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_mem_2.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_adp_constraints.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_find_best_cell.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_refine_xray_curvs.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_expand_to_p1.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_miller_lookup_utils.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_coordination_sequences.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_miller_data_manipulation.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_reflection_statistics.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_crystal.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_statistics_graphs.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_web_change_basis.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_sgtbx_lattice_symmetry.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_sgtbx_harker.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_map_is_periodic.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_sf_low_res_accuracy.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_grm_modifications.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_french_wilson.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_twin_target.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_sgtbx_denominators.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_map_weights_for_symmetry_summation.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_direct_scaling.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_wavelength_units.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_connectivity.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_grm_pickling.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_sgtbx_tidy_pickling.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_crystal_asu_clusters.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_adp_aniso_restraints.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_xray_fast_gradients.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_krivy_gruber.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_miller_double_step_filtration.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_geometry_restraints_2.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_maptbx_box.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_xray_derivatives.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_adp_constraints_cartesian.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_sgtbx_subgroups.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_f_model.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_prepare_map_for_docking.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_xray_minimization.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_direct_space_asu.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_connectivity_allsym.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_weighting_schemes.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_emma.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_xray_minimization_failure.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_sgtbx_site_constraints.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_fourier_transform_real_part_at_x.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_create_models_or_maps.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_miller_statistics.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_miller_merge_equivalents.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_xray_target_functors.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_sphericity.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_mem.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_crystal_close_packing.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_sampled_model_density.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_itvb_2001_table_a1427_hall_symbols.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_math_module.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_sgtbx_special_op_simplifier.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_maptbx_structure_factors.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/regression creating /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/plane_groups.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/cosets.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/sys_abs_equiv.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/rational_matrices_point_groups.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/reticular_twin_laws.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/show_cosets.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/reticular_pg_tools.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/pointgroup_tools.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/symbol_confidence.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/subgroups.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/lattice_symmetry.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/literal_description.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/sub_lattice_tools.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/harker.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/bravais_types.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx creating /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/icsd_radii.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/tiny_pse.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/neutron.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/formula.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/sasaki.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/fp_fdp.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/van_der_waals_radii.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/e_scattering.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/distance_based_connectivity.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/henke.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/attenuation_coefficient.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/chemical_elements.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/read_custom_scattering_dict.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/covalent_radii.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/gaussian_fit.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/wavelengths.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx creating /<>/.pybuild/cpython3_3.12/build/cctbx/geometry copying cctbx/geometry/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/geometry creating /<>/.pybuild/cpython3_3.12/build/cctbx/source_generators copying cctbx/source_generators/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/source_generators copying cctbx/source_generators/flex_fwd_h.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/source_generators creating /<>/.pybuild/cpython3_3.12/build/cctbx/merging copying cctbx/merging/brehm_diederichs.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/merging copying cctbx/merging/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/merging creating /<>/.pybuild/cpython3_3.12/build/cctbx/adp_restraints copying cctbx/adp_restraints/tst_ext.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/adp_restraints copying cctbx/adp_restraints/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/adp_restraints copying cctbx/adp_restraints/energies.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/adp_restraints copying cctbx/adp_restraints/flags.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/adp_restraints creating /<>/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/shelx.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/frac_cart.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/change_hand.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/dispatcher.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/all_axes.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/change_basis.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/cgi_utils.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/io_utils.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/multiple_cell.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/libtbx_help.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/wyckoff.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/replay.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/browse_settings.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/structure_factors.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/structure_factors_pdb.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/explore_symmetry.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/emma.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/lattice_symmetry.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/iotbx_cif_validate.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/change_setting.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/phase_o_phrenia.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/web creating /<>/.pybuild/cpython3_3.12/build/cctbx/array_family copying cctbx/array_family/flex.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/array_family copying cctbx/array_family/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/array_family creating /<>/.pybuild/cpython3_3.12/build/cctbx/uctbx copying cctbx/uctbx/reduction_base.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/uctbx copying cctbx/uctbx/gruber_1973.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/uctbx copying cctbx/uctbx/gruber_1973_table_1.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/uctbx copying cctbx/uctbx/krivy_gruber_1976.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/uctbx copying cctbx/uctbx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/uctbx creating /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/tst_proxy_registry.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/tst_angle_derivs.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/manager.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/linking_class.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/tst_process_nonbonded_proxies.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/auto_linking_types.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/base_geometry.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/distance_least_squares.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/standard_cif_links.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/lbfgs.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/tst_ext.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/process_nonbonded_proxies.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/energies.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/tst_nonbonded_overlaps.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/nonbonded_overlaps.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/flags.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/tst_motif.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints creating /<>/.pybuild/cpython3_3.12/build/cctbx/masks copying cctbx/masks/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/masks creating /<>/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/auto_sharpen.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/segment_and_split_map.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/wavelength_units.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/samosa_scale.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/precession_view.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/version.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/diffuse.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/euclidean_model_matching.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/structure_factor_timings.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/space_group_info.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/cod_select_and_pickle.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/brehm_diederichs.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/find_reticular_twin_laws.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/cctbx_test_nightly.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/subgroups.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/samosa_join.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/xray_structure.show.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/eltbx.show_fp_fdp.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/form_factor_query.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/command_line creating /<>/.pybuild/cpython3_3.12/build/cctbx/miller copying cctbx/miller/tst_reindexing.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/miller copying cctbx/miller/reindexing.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/miller copying cctbx/miller/display.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/miller copying cctbx/miller/tst_map_to_asu_isym.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/miller copying cctbx/miller/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/miller creating /<>/.pybuild/cpython3_3.12/build/cctbx/omz copying cctbx/omz/tst_dev.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/omz copying cctbx/omz/tst_bfgs.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/omz copying cctbx/omz/tardy_adaptor.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/omz copying cctbx/omz/dev.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/omz copying cctbx/omz/cod_refine.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/omz copying cctbx/omz/cif_refine.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/omz copying cctbx/omz/cod_select_and_pickle.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/omz copying cctbx/omz/bfgs.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/omz copying cctbx/omz/eval_iso_vs_refined.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/omz copying cctbx/omz/pdb_dev.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/omz copying cctbx/omz/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/omz creating /<>/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus copying cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus copying cctbx/examples/structure_factor_calculus/sites_derivatives.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus copying cctbx/examples/structure_factor_calculus/site_derivatives.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus copying cctbx/examples/structure_factor_calculus/u_star_derivatives.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus copying cctbx/examples/structure_factor_calculus/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus creating /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging copying cctbx/examples/merging/test_levenberg_sparse.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging copying cctbx/examples/merging/sigma_correction.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging copying cctbx/examples/merging/task4.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging copying cctbx/examples/merging/tst_permutations.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging copying cctbx/examples/merging/data_subset.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging copying cctbx/examples/merging/test1.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging copying cctbx/examples/merging/show_results.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging copying cctbx/examples/merging/data_utilities.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging copying cctbx/examples/merging/test_cc_half.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging copying cctbx/examples/merging/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging creating /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa copying cctbx/examples/merging/samosa/per_lattice_postrefinement.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa copying cctbx/examples/merging/samosa/scale.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa copying cctbx/examples/merging/samosa/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa copying cctbx/examples/merging/samosa/join.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa creating /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/bcr copying cctbx/maptbx/bcr/bcr.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/bcr copying cctbx/maptbx/bcr/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/bcr creating /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/from_scatterers.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/manager.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/global_counters.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/gradients_fft.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/from_scatterers_fft.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/from_scatterers_direct.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/misc.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/gradients_base.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/from_scatterers_direct_parallel.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/gradient_flags.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/gradients_direct.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/gradients.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors creating /<>/.pybuild/cpython3_3.12/build/cctbx/xray/observations copying cctbx/xray/observations/tst_observations.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/xray/observations copying cctbx/xray/observations/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/xray/observations creating /<>/.pybuild/cpython3_3.12/build/cctbx/xray/targets copying cctbx/xray/targets/tst_shelxl_wght_ls.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/xray/targets copying cctbx/xray/targets/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/xray/targets copying cctbx/xray/targets/tst_r1.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/xray/targets copying cctbx/xray/targets/r1.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/xray/targets creating /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/facet_analysis.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/check_redundancies.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/short_cuts.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/cut_plane.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/reference_table.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu creating /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/proto copying cctbx/sgtbx/direct_space_asu/proto/tst_asu.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/proto copying cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/proto copying cctbx/sgtbx/direct_space_asu/proto/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/proto creating /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/combine_fits.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/create_n_gaussian_raw_cpp.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/format_gaussian_fits.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/rez_rez_grant.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/itvc_approx.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/itvc_fits.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/kissel_fits.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/itvc_kissel.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/hydrogen_plots.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/itvc_cross_validation.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/itvc_section61_io.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/kissel_io.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/e_scattering_plots.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development creating /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/xray_scattering copying cctbx/eltbx/xray_scattering/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/xray_scattering creating /<>/.pybuild/cpython3_3.12/build/cctbx/source_generators/eltbx copying cctbx/source_generators/eltbx/generate_henke_cpp.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/source_generators/eltbx copying cctbx/source_generators/eltbx/generate_sasaki_cpp.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/source_generators/eltbx copying cctbx/source_generators/eltbx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/source_generators/eltbx creating /<>/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery copying cctbx/web/asu_gallery/guide_to_notation.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery copying cctbx/web/asu_gallery/jv_index.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery copying cctbx/web/asu_gallery/jv_asu.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery copying cctbx/web/asu_gallery/jvx.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery copying cctbx/web/asu_gallery/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery copying cctbx/web/asu_gallery/web_links.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery creating /<>/.pybuild/cpython3_3.12/build/cctbx/uctbx/determine_unit_cell copying cctbx/uctbx/determine_unit_cell/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cctbx/uctbx/determine_unit_cell creating /<>/.pybuild/cpython3_3.12/build/mmtbx/kinemage copying mmtbx/kinemage/validation.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/kinemage copying mmtbx/kinemage/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/kinemage creating /<>/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/tst_correlation.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/tst_composite_omit_map_2.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/kick.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/fem.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/polder.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/correlation.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/utils.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/mtriage.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/tst_composite_omit_map_3.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/tst_map_model_cc_and_vals_per_atom_xtal.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/fobs_minus_fobs_map.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/superpose.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/tst_composite_omit_map.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/map_model_cc.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/composite_omit_map.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/maps creating /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_4.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_3.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_validate_H.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_fd_3.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/connectivity.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_fd_5.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_2.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/riding.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_8.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_add_hydrogen_3.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_fd_1.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_coefficients.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_fd_4.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_7.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_minimize.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_add_hydrogen_0.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/parameterization.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_5.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_1.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/find.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_add_hydrogen_2.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_connectivity.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_9.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_fd_2.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_manager.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/build_hydrogens.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/validate_H.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/specialised_hydrogen_atoms.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_6.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_add_hydrogen.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/reduce_hydrogen.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens creating /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/suitenout.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/mainchain.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/transdent.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/suiteninput.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/dualparse.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/suiteninit.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/suitenamedefs.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/diangle.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/suitealyze.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/suitename.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/suites.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename creating /<>/.pybuild/cpython3_3.12/build/mmtbx/sisa copying mmtbx/sisa/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/sisa creating /<>/.pybuild/cpython3_3.12/build/mmtbx/polygon copying mmtbx/polygon/tst_gui.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/polygon copying mmtbx/polygon/tst_polygon_data.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/polygon copying mmtbx/polygon/tst.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/polygon copying mmtbx/polygon/output.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/polygon copying mmtbx/polygon/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/polygon creating /<>/.pybuild/cpython3_3.12/build/mmtbx/alignment copying mmtbx/alignment/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/alignment creating /<>/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/analysis.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/tls_as_xyz.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/optimise_amplitudes.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/perm15.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/command_line.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/perm10.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/perm12.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/perm13.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/utils.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/perm14.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/ladp.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/tools.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/decompose.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/perm11.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/tls creating /<>/.pybuild/cpython3_3.12/build/mmtbx/disorder copying mmtbx/disorder/tst.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/disorder copying mmtbx/disorder/tst_analyze_model.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/disorder copying mmtbx/disorder/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/disorder copying mmtbx/disorder/backbone.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/disorder copying mmtbx/disorder/tst_backbone.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/disorder copying mmtbx/disorder/analyze_model.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/disorder creating /<>/.pybuild/cpython3_3.12/build/mmtbx/den copying mmtbx/den/refinement.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/den copying mmtbx/den/plot_weights.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/den copying mmtbx/den/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/den creating /<>/.pybuild/cpython3_3.12/build/mmtbx/solvent copying mmtbx/solvent/map_to_water.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/solvent copying mmtbx/solvent/ensemble_ordered_solvent.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/solvent copying mmtbx/solvent/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/solvent copying mmtbx/solvent/ordered_solvent.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/solvent creating /<>/.pybuild/cpython3_3.12/build/mmtbx/building copying mmtbx/building/extend_sidechains.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/building copying mmtbx/building/tst_make_library.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/building copying mmtbx/building/tst_extend_sidechains_2.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/building copying mmtbx/building/make_library.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/building copying mmtbx/building/minimize_chain.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/building copying mmtbx/building/cablam_idealization.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/building copying mmtbx/building/tst_extend_sidechains.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/building copying mmtbx/building/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/building copying mmtbx/building/loop_idealization.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/building copying mmtbx/building/merge_models.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/building creating /<>/.pybuild/cpython3_3.12/build/mmtbx/f_model copying mmtbx/f_model/f_model_info.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/f_model copying mmtbx/f_model/f_model.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/f_model copying mmtbx/f_model/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/f_model creating /<>/.pybuild/cpython3_3.12/build/mmtbx/utils copying mmtbx/utils/tst_switch_rotamers.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/utils copying mmtbx/utils/ntc.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/utils copying mmtbx/utils/rotatable_bonds.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/utils copying mmtbx/utils/fab_elbow_angle.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/utils copying mmtbx/utils/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/utils copying mmtbx/utils/grid2d.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/utils creating /<>/.pybuild/cpython3_3.12/build/mmtbx/twinning copying mmtbx/twinning/probabalistic_detwinning.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/twinning copying mmtbx/twinning/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/twinning copying mmtbx/twinning/twin_f_model.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/twinning creating /<>/.pybuild/cpython3_3.12/build/mmtbx/model copying mmtbx/model/restraints.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/model copying mmtbx/model/utils.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/model copying mmtbx/model/statistics.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/model copying mmtbx/model/model.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/model copying mmtbx/model/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/model creating /<>/.pybuild/cpython3_3.12/build/mmtbx/real_space copying mmtbx/real_space/tst.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/real_space copying mmtbx/real_space/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/real_space creating /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/example2.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/scaler.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/example.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/f_model_all_scales.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_aniso_scaler.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/multi_mask_bulk_solvent.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/mosaic.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/kbu_refinery.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_mosaic.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_flat_nonuniform.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_bulk_solvent_and_scaling.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/bulk_solvent_and_scaling.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_scaler.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent creating /<>/.pybuild/cpython3_3.12/build/mmtbx/chemical_components copying mmtbx/chemical_components/cif_parser.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/chemical_components copying mmtbx/chemical_components/tst.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/chemical_components copying mmtbx/chemical_components/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/chemical_components creating /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_polder_1.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_probe.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_msa.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_isomorphous_difference_misc.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_maps_misc.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_model_map.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_angle.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_ligand_ncs.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_process_predicted_model.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_geo_min_restraints_phil.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_table_one.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_real_space_correlation.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_schrodinger_interface.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_adp_restraints.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_refine_anomalous_substructure.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_add_arrows_on_plot.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_command_line_input.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_reduce_timeout.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_map_coeffs_simple.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_sequence_validation.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_loop_closure.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_polder.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_multi_residue_class.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_ringer.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_fmodel.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_cis_trans_peptide_link.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/make_fake_anomalous_data.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_helix_sheet_recs_as_pdb_files.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_cablam.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_polder_ccs.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_add_h_to_water.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_flipping_his.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_model_vs_sequence.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_polder_2.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_cif_as_mtz_wavelengths.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_find_ncs.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_ml_estimate.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_pdbtools.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_statistics_output.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_validate_ligands.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_geometry_minimization.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_cc_star.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_alignment.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_map_type_parser.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_chain_comparison.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_fix_rotamer_outliers.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_fmodel_misc.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_prune_model.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_regularize_from_pdb.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_polder_3.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_rank_scale_map.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_apply_cif_restraints.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_altloc_chain_break.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_model_vs_map.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_origin_ids.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_mtz2map.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_domains_from_pae.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_models_to_from_chains.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_rigid_bond_test.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_dynamics_cli.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_map_model_cc.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_examples.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_sort_hetatms.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_find_ss_structure.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_clashes.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_minimize_chain.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_fmodel_2.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_special_term_at_end.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_scattering_type_registry.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_metal_link_1.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_fmodel_fd.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_psi_phi_extraction.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_polder_box.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_fmodel_no_cryst1.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_validation_summary.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_utils.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_altloc_remediate.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_reduce.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_sampled_model_density.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_anomalous_substructure.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_superpose.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression creating /<>/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_validate_mg.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_pick_approx_zn.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_validate_ca.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_geometries.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/geometry.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/identify.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/environment.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_pick_k.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_pick_ca_svm.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_pickle.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/utils.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_environment.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_symmetry_axis.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_parameters.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/build.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_pick_ca.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_pick_mg.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_utils.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/halides.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ions creating /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/tst_segid.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/ss_validation.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/secondary_structure_params.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/tst_insertion_codes.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/proteins.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/find_ss_from_ca.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/utils.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/regularize_from_pdb.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/tst.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/nucleic_acids.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure creating /<>/.pybuild/cpython3_3.12/build/mmtbx/rsr copying mmtbx/rsr/tst.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/rsr copying mmtbx/rsr/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/rsr creating /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry copying mmtbx/geometry/altloc.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry copying mmtbx/geometry/topology.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry copying mmtbx/geometry/clash.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry copying mmtbx/geometry/shared_types.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry copying mmtbx/geometry/sphere_surface_sampling.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry copying mmtbx/geometry/asa.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry copying mmtbx/geometry/indexing.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry copying mmtbx/geometry/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry creating /<>/.pybuild/cpython3_3.12/build/mmtbx/rotamer copying mmtbx/rotamer/ramachandran_eval.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/rotamer copying mmtbx/rotamer/tst_geostd_vs_sidechain_angles_props.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/rotamer copying mmtbx/rotamer/nqh.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/rotamer copying mmtbx/rotamer/ramachandran_eval_deprecated.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/rotamer copying mmtbx/rotamer/graphics.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/rotamer copying mmtbx/rotamer/tst_rotamer_eval.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/rotamer copying mmtbx/rotamer/rotamer_eval.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/rotamer copying mmtbx/rotamer/n_dim_table.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/rotamer copying mmtbx/rotamer/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/rotamer copying mmtbx/rotamer/sidechain_angles.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/rotamer creating /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/cif_triage.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_metal_coordination.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_cif_triage.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_correct_hydrogens.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/idealized_aa.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_selection.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_chg.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_geo_reduce_for_tardy.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_rna_dna_interpretation.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/pdb_interpretation.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/populate_auto_linking_origin_ids.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_pdb_interpretation_ncs_processing.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_tyr_from_gly_and_bnz.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_iron_sulfur_clusters.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/correct_hydrogen_geometries.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_glyco_coordination.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_cif_types.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_superpose_ideal.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/server.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/rotamer_utils.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_rotamer_utils.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/linking_mixins.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/conformation_dependent_restraints.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/linking_setup.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_protein_interpretation.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/cif_types.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_carbo_linking.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_linking.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_idealized_aa.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/rna_sugar_pucker_analysis.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/glyco_chiral_values.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/glyco_utils.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/hydrogen_restrictions.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_paral_geo.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_all_cif_files.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_pdb_interpretation.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_neutron_distance.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_pdb_interpretation_3.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_deuterium_terminii.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_pdb_interpretation_2.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_server.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/conv_v2_v3.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/linking_utils.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_glyco_hand.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_rna_sugar_pucker_analysis.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_motif.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/bondlength_defaults.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library creating /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/cbd_utils.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/barbed_wire_analysis.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/analyze_peptides.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/waters.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/ligands.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/cbetadev.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/model_properties.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/ensembles.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/mean_devs_VAL_THR_ILE_phi_psi.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/comparama.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/chain_comparison.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/evalurama.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/datasets.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/mp_validate_bonds.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/restraints.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/graphics.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/utils.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/ramalyze.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/sequence.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/cablam.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/experimental.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/mean_devs_others_phi_psi.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/fav_lists.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/comprehensive_residue.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/undowser.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/rna_validate.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/rotalyze.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/rama_z.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/clashscore.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/omegalyze.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/validate_ligands.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/convert_lists.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/mean_devs_PRO_phi_psi.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation creating /<>/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/tst_05.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/tst_02.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/pair_interaction.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/tst_00.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/tst_04.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/tst_01.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/tst_03.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction creating /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/atom_selection.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/arginine_geometry.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/ss_validation.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/barbed_wire_analysis.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/reduce2.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/ss_idealization.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/probescore_ligand.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/quantum_interface.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/cbetadev.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/ntc_validation.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/suitename_old.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/polder.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/probe2.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/prepare_pdb_deposition.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/comparama.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/evalurama.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/rna_validate_puckers.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/rna_validate_suites.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/process_predicted_model.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/mp_validate_bonds.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/emringer.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/water_b_factors.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/mask.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/ramalyze.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/chiral_validation.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/cablam.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/hydrogenate.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/cablam_idealization.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/suitename.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/undowser.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/rna_validate.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/pdbtools.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/rotalyze.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/rna_validate_bonds.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/pdb_as_cif.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/rama_z.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/hbond.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/nonbonded_overlaps.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/clashscore.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/omegalyze.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/validate_ligands.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/programs creating /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tst_refinement_flags.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tst_real_space_simple.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tst_select_best_starting_model.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tst_anomalous_scatterer_groups.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/rigid_body.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/print_statistics.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tardy.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/targets.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/select_best_starting_model.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tst_misc.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/minimization.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/refinement_flags.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/geometry_minimization.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/adp_refinement.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/group.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tst_group.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/inspect_tardy_trajectory.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tst_rigid_body.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tst_group_2.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/flip_peptide_side_chain.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/wx_tardy_pdb.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/utils.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/orca.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/weights_params.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/minimization_ncs_constraints.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/anomalous_scatterer_groups.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tst_fit_rotamers.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/energy_monitor.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/minimization_monitor.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/occupancies.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tst_occupancy_selections.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement creating /<>/.pybuild/cpython3_3.12/build/mmtbx/ligands copying mmtbx/ligands/electrons.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ligands copying mmtbx/ligands/tst_ready_set_utils.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ligands copying mmtbx/ligands/xtal_screens.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ligands copying mmtbx/ligands/tst_xtal_screens.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ligands copying mmtbx/ligands/ready_set_basics.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ligands copying mmtbx/ligands/chemistry.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ligands copying mmtbx/ligands/hierarchy_utils.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ligands copying mmtbx/ligands/rdkit_utils.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ligands copying mmtbx/ligands/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ligands copying mmtbx/ligands/ready_set_utils.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ligands creating /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/massage_twin_detwin_data.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/tst_bayesian_estimator.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/relative_scaling.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/fa_estimation.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/xtriage.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/fest.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/bayesian_estimator.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/pair_analyses.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/mean_f_rms_f.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/tst_massage_data.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/rip_scale.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/tst_plan_sad_experiment.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/tst_mean_f_rms_f.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/tst_scaling.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/twmad_scale.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/absolute_scaling.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/data_statistics.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/tst_xtriage_twin_analyses.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/pre_scale.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/matthews.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/twin_analyses.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/make_param.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/absence_likelihood.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/siras_scale.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/relative_wilson.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/tst_outlier.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/ta_alpha_beta_calc.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/thorough_outlier_test.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/tst_sigmaa.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/outlier_plots.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/tst_xtriage.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/remove_outliers.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/tst_absences.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/basic_analyses.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/sad_scale.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/absences.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/sigmaa_estimation.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/plan_sad_experiment.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/random_omit.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/sir_scale.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/outlier_rejection.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling creating /<>/.pybuild/cpython3_3.12/build/mmtbx/atomic_environment_vectors copying mmtbx/atomic_environment_vectors/tst.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/atomic_environment_vectors copying mmtbx/atomic_environment_vectors/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/atomic_environment_vectors creating /<>/.pybuild/cpython3_3.12/build/mmtbx/ncs copying mmtbx/ncs/tncs.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ncs copying mmtbx/ncs/ligands.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ncs copying mmtbx/ncs/ncs.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ncs copying mmtbx/ncs/cartesian_restraints.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ncs copying mmtbx/ncs/ncs_restraints_group_list.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ncs copying mmtbx/ncs/ncs_params.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ncs copying mmtbx/ncs/ncs_search.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ncs copying mmtbx/ncs/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ncs copying mmtbx/ncs/ncs_utils.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ncs creating /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/qm_manager.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/tst_c_beta_restraints.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/tst_reference_coordinate.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/quantum_interface.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/geo_file_parsing.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/tst_manager.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/mopac_manager.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/ramachandran.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/c_beta.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/afitt.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/tst_ramachandran.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/orca_manager.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/tst_reference_coordinate2.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/tst_geo_file_parsing.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/quantum_restraints_manager.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/qi_utils.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/reference.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/base_qm_manager.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/external.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints creating /<>/.pybuild/cpython3_3.12/build/mmtbx/probe copying mmtbx/probe/CompareOriginalAndNewProbeAtomInfo.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/probe copying mmtbx/probe/Helpers.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/probe copying mmtbx/probe/tst_mmtbx_probe_ext.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/probe copying mmtbx/probe/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/probe copying mmtbx/probe/AtomTypes.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/probe creating /<>/.pybuild/cpython3_3.12/build/mmtbx/ias copying mmtbx/ias/tst_ias.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ias copying mmtbx/ias/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ias creating /<>/.pybuild/cpython3_3.12/build/mmtbx/masks copying mmtbx/masks/tst_asu_mask.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/masks copying mmtbx/masks/tst_masks.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/masks copying mmtbx/masks/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/masks creating /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/find_tls_groups.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/fix_rotamer_outliers.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/estimate_bijvoet_ratio.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/show_r_factors_by_shell.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/flipbase.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/grow_density.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/arginine_geometry.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/extend_sidechains.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/table_one.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/maximum_entropy_map.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/barbed_wire_analysis.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/development_fem.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/model_vs_sequence.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/reduce2.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/validate_ions.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/super.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/cablam_training.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/analyze_peptides.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/monomer_library.comp_as_motif.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/ss_idealization.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/maps.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/pdb_atom_selection.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/xtriage.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/probescore_ligand.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/real_space_correlation.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/quantum_interface.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/secondary_structure_validation.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/prune_model.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/fest.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/tls_as_xyz.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/tls_analysis.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/models_as_chains.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/mp_geo.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/development.aev.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/validate_waters.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/pdb_interpretation.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/select_best_starting_model.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/search_pdb_symmetry.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/sisa.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/rigid_bond_test.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/model_map.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/cbetadev.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/analyze_static_disorder.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/ntc_validation.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/model_model_distances.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/suitename_old.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/partial_omit_map.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/model_vs_data.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/polder.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/geometry_minimization.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/simulate_low_res_data.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/emringer_score.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/pdb_view_ad_hoc.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/probe2.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/prepare_pdb_deposition.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/get_related_ensemble.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/validate_H_cl_app.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/density_modification.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/f000.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/matthews.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/cdl_lookup.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/massage_data.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/find_peaks_holes.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/r_factor_statistics.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/comparama.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/fake_f_obs.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/evalurama.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/molprobity.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/fmodel.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/rna_validate_puckers.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/compute_map_coefficients.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/anneal_real_space.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/afitt.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/rna_validate_suites.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/process_predicted_model.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/water_screen.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/mp_validate_bonds.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/emringer.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/ringer.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/compare_ligands.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/water_b_factors.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/mask.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/ssm_rmsd_for_chains.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/find_residue_in_pdb.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/verify_mon_lib_data.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/rebuild_rotarama_cache.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/fetch_pdb.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/ramalyze.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/chiral_validation.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/helix_sheet_recs_as_pdb_files.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/cablam.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/hydrogenate.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/cablam_idealization.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/chains_as_models.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/validation_summary.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/afitt_fd.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/map_box.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/fobs_minus_fobs_map.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/refine_anomalous_substructure.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/rebuild_cablam_cache.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/superpose.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/tls.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/map_to_structure_factors.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/suitename.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/xmanip.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/distance_difference.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/cablam_validate.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/angle.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/undowser.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/map_comparison.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/fab_elbow_angle.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/rna_validate.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/cif_as_mtz.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/remove_outliers.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/cc_star.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/dynamics.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/pdbtools.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/kinemage.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/apply_ncs_to_ligand.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/rotalyze.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/real_space_diff_map.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/secondary_structure_restraints.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/rna_validate_bonds.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/model_vs_map.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/mtz2map.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/show_suspicious_residues.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/rama_z.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/hbond.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/nonbonded_overlaps.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/model_idealization.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/rank_scale_map.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/altloc_remediate.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/reciprocal_space_arrays.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/plan_sad_experiment.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/map_to_model_histogram.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/strip_model.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/mon_lib_cif_triage.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/clashscore.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/omegalyze.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/sort_hetatms.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/perigee.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/fmodel_simple.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/validate_ligands.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/fix_rama_outliers.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line creating /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam copying mmtbx/cablam/cablam_training.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam copying mmtbx/cablam/cablam_res.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam copying mmtbx/cablam/cablam_align.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam copying mmtbx/cablam/cablam_fingerprints.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam copying mmtbx/cablam/cablam_math.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam copying mmtbx/cablam/cablam_validate.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam copying mmtbx/cablam/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam creating /<>/.pybuild/cpython3_3.12/build/mmtbx/max_lik copying mmtbx/max_lik/tst_maxlik.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/max_lik copying mmtbx/max_lik/max_like_non_uniform.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/max_lik copying mmtbx/max_lik/tst_max_lik.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/max_lik copying mmtbx/max_lik/maxlik.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/max_lik copying mmtbx/max_lik/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/max_lik creating /<>/.pybuild/cpython3_3.12/build/mmtbx/nci copying mmtbx/nci/data_filtering.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/nci copying mmtbx/nci/tst_hbond.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/nci copying mmtbx/nci/skew_kurt_plot.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/nci copying mmtbx/nci/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/nci copying mmtbx/nci/hbond.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/nci creating /<>/.pybuild/cpython3_3.12/build/mmtbx/reduce copying mmtbx/reduce/InteractionGraph.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/reduce copying mmtbx/reduce/tst_mmtbx_reduce_ext.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/reduce copying mmtbx/reduce/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/reduce copying mmtbx/reduce/Movers.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/reduce copying mmtbx/reduce/Optimizers.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/reduce creating /<>/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues copying mmtbx/idealized_aa_residues/sample_rotamers.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues copying mmtbx/idealized_aa_residues/all_his.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues copying mmtbx/idealized_aa_residues/rotamer_manager.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues copying mmtbx/idealized_aa_residues/tst.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues copying mmtbx/idealized_aa_residues/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues creating /<>/.pybuild/cpython3_3.12/build/mmtbx/dynamics copying mmtbx/dynamics/simulated_annealing.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/dynamics copying mmtbx/dynamics/ensemble_cd.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/dynamics copying mmtbx/dynamics/cartesian_dynamics.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/dynamics copying mmtbx/dynamics/constants.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/dynamics copying mmtbx/dynamics/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/dynamics copying mmtbx/dynamics/tst_sa.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/dynamics copying mmtbx/dynamics/tst_cartesian_dynamics.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/dynamics creating /<>/.pybuild/cpython3_3.12/build/mmtbx/wwpdb copying mmtbx/wwpdb/rcsb_web_services.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/wwpdb copying mmtbx/wwpdb/tst_rcsb_web_services.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/wwpdb copying mmtbx/wwpdb/tst_standard_geometry_cif.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/wwpdb copying mmtbx/wwpdb/utils.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/wwpdb copying mmtbx/wwpdb/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/wwpdb copying mmtbx/wwpdb/standard_geometry_cif.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/wwpdb copying mmtbx/wwpdb/tst_utils.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/wwpdb creating /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_omega_cdl.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_mcl_02.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/nucleotides.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/multi_residue_cdl_class.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/mcl_sf4_coordination.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/investigate_rotamer_space.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/omega.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_cdl.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_cdl_esd.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/altloc_weighting.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_mcl_01.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_rna_dna_fragments.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/rdl_database.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/metal_coordination_library.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/multi_base_class.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/testing_utils.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/bond_angle_registry.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/utils.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/cdl_utils.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/pH_dependent_restraints.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/mcl.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/hpdl_database.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/rotamers.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/density_dependent_restraints.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_mcl_03.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/cdl_setup.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/check_cdl_database.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/cdl_database.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_rdl.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_hpdl.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_cdl_nucleotides.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_pH_mechanism.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/LinkedResidues.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/hydrogen_bonding.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_multi_residue_rna.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/cdl_svl_database.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/histidines.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/omega_database.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_poly_ca_multi_residue.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/multi_residue_class.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_cis_c_n_ca.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/sf4_restraints.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_mutli_residue.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library creating /<>/.pybuild/cpython3_3.12/build/mmtbx/density_modification copying mmtbx/density_modification/tst_density_modification.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/density_modification copying mmtbx/density_modification/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/density_modification creating /<>/.pybuild/cpython3_3.12/build/mmtbx/ringer copying mmtbx/ringer/tst_em_rscc.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ringer copying mmtbx/ringer/em_rolling.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ringer copying mmtbx/ringer/em_rscc.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ringer copying mmtbx/ringer/tst_emringer.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ringer copying mmtbx/ringer/emringer.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ringer copying mmtbx/ringer/em_scoring.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ringer copying mmtbx/ringer/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ringer creating /<>/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/mod_util.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/mod_input.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/mod_ga.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/mod_optimize.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/mod_mtz.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/mod_masks.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize creating /<>/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure copying mmtbx/building/loop_closure/berkeley_ramalyze.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure copying mmtbx/building/loop_closure/custom_gm.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure copying mmtbx/building/loop_closure/utils.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure copying mmtbx/building/loop_closure/ccd.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure copying mmtbx/building/loop_closure/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure copying mmtbx/building/loop_closure/starting_conformations.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure creating /<>/.pybuild/cpython3_3.12/build/mmtbx/building/ligands copying mmtbx/building/ligands/lifi.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/building/ligands copying mmtbx/building/ligands/tst_00.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/building/ligands copying mmtbx/building/ligands/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/building/ligands creating /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_formula_t_S_10_vs_11_4muy.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_get_t_scheme.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_tls_analysis.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_tls_optimise_amplitudes.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_u_tls_vs_u_ens_01.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_u_tls_vs_u_ens_00.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_tls.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_u_tls_vs_u_ens_04.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_tls_refinement_fft.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_formula_t_S_10_vs_11_2igd.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_tls_as_xyz.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_u_tls_vs_u_ens_02.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_u_tls_vs_u_ens_03.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_tls_utils.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls creating /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_utils_merge_models.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_get_vdw_radii.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_remove_alternative_conformations.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_2.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_mtrix.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_cart_ref_restraints.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_ramachandran.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_dedeuterate.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_biomt_mtrix.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_symmetry.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_merge.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_biomt_mtrix_2.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_ncs.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_tors_ref_restraints.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_neutralize_scatterers.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_set_hydrogen_bond_length.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model creating /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_minimization_ncs_constraints.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_ncs_search_flips.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_ncs_restraints_group_list.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_geometry_minimization_ncs_constraints.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_minimization_ncs_constraints_real_space.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_minimization_ncs_constraints2.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_minimization_ncs_constraints3.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_ncs_search.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_restraints.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_ncs_utils.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs creating /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/svm copying mmtbx/ions/svm/dump_sites.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/svm copying mmtbx/ions/svm/utils.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/svm copying mmtbx/ions/svm/tst_classifier.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/svm copying mmtbx/ions/svm/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/svm creating /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/tst_2.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/ss_idealization.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/tst_3.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/tst_1.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/tst_io.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/tst_ss_id_ncs.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build creating /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity copying mmtbx/validation/molprobity/probescore_ligand.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity copying mmtbx/validation/molprobity/mp_geo.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity copying mmtbx/validation/molprobity/kinemage_templates.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity copying mmtbx/validation/molprobity/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity creating /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_experimental.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_waters.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_mp_geo_endtoend.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_find_region_max_value.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_omegalyze.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_mp_validate_bonds.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_rama_z_01.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_chiral_validation.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_mp_geo.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/run_restraints.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_cablam.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_undowser.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_keep_hydrogens.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_do_flips_clashscore.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_molprobity_2.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_rna_validate.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_rama_z_02.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_clashscore.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_model_properties.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_mp_geo_chiral_volume_cases.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_molprobity_1.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_restraints.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_ramalyze2.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_cbetadev.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_suitename.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_molprobity_5.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_molprobity_arguments.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_symmetry_SS.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_cbetadev_02.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_ramalyze.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_molprobity_3.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_clashscore_2.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_hydrogen_addition_clashscore.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_molprobity_4.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_cablam_2.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_rotalyze.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression creating /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/ramachandran copying mmtbx/validation/ramachandran/convert_from_text.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/ramachandran copying mmtbx/validation/ramachandran/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/ramachandran creating /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/fit_his.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/fit_water.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_1H.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/individual_sites.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/flipbase.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_weight.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_2.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_individual_sites_3.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_0.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_aa_residue_axes_and_clusters.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/rigid_body.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_selection.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_1.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_flipbase.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_3.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_monitor.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_5.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_individual_sites_1.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_rigid_body.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/fit_residue.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/weight.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_1H.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_7.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/utils.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_0H.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/adp.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/fit_small_molecule.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_4.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_individual_sites_2.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/explode_and_refine.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_4.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_1.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_6.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_water.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/occupancy.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_6.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/fit_residues.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_5.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_2.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_3.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space creating /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/ensemble_refinement copying mmtbx/refinement/ensemble_refinement/ensemble_probability.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/ensemble_refinement copying mmtbx/refinement/ensemble_refinement/ensemble_utils.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/ensemble_refinement copying mmtbx/refinement/ensemble_refinement/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/ensemble_refinement creating /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/utils.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/reference_model.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints creating /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam/fingerprints copying mmtbx/cablam/fingerprints/antiparallel_beta.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam/fingerprints copying mmtbx/cablam/fingerprints/antiparallel_beta_bridge.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam/fingerprints copying mmtbx/cablam/fingerprints/parallel_beta.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam/fingerprints copying mmtbx/cablam/fingerprints/regular_helix_definitions.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam/fingerprints copying mmtbx/cablam/fingerprints/how_to.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam/fingerprints copying mmtbx/cablam/fingerprints/__init__.py -> /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam/fingerprints creating /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/tst_detectors.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/npy.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/adsc.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/macscience.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/adsc_minicbf.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/edf.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/noir.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/dtrek.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/hamamatsu.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/pilatus_slice.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/tst_debug_write.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/active_area_filter.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/image_from_http_request.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/tst_adsc.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/beam_center_convention.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/tst_py_cbf.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/cspad_detector_formats.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/url_support.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/raxis_nonsquare.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/marIP.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/eiger.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/adsc_module.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/saturn.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/generic_detector.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/cbf.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/__init__.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/bruker.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/tst_cbf_comp_read_meth.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/mar.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/test_raxis2.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/test_mar.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/eiger_minicbf.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/pilatus_minicbf.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/detectorbase.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/raxis.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/raxisbase.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors creating /<>/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/tst_mtz_free_flipper.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/pdb_hierarchy.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/prepare_model_for_rsr.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/pdb_symmetry_copies.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/direct_methods_light.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/recalculate_phenix_refine_r_factors.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/pdb_split_chains.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/pdbx_mmcif_tutorial.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/pdb_tardy_conf_sampling_simple.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/mtz_convert_free_to_work.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/pdb_to_map_simple.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/mtz_free_flipper.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/pdb_shake.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/__init__.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/shelx_latt_sym_to_space_group_symbol.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/libtbx_phil_examples.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/examples creating /<>/.pybuild/cpython3_3.12/build/iotbx/scalepack copying iotbx/scalepack/merge.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/scalepack copying iotbx/scalepack/crystal_symmetry_from_hkl.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/scalepack copying iotbx/scalepack/space_group_dictionary.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/scalepack copying iotbx/scalepack/tst_merge.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/scalepack copying iotbx/scalepack/tst_no_merge_original_index.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/scalepack copying iotbx/scalepack/__init__.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/scalepack copying iotbx/scalepack/no_merge_original_index.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/scalepack creating /<>/.pybuild/cpython3_3.12/build/iotbx/dtrek copying iotbx/dtrek/dtrek_symmetry_dict.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/dtrek copying iotbx/dtrek/reflnlist_reader.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/dtrek copying iotbx/dtrek/crystal_symmetry_from_ref.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/dtrek copying iotbx/dtrek/__init__.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/dtrek creating /<>/.pybuild/cpython3_3.12/build/iotbx/solve copying iotbx/solve/fpfm_reader.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/solve copying iotbx/solve/crystal_symmetry_from_inp.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/solve copying iotbx/solve/__init__.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/solve creating /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_rna_dna_atom_names.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/modified_aa_names.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/atom_selection.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/remark_290_interpretation.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/misc_records_output.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_secondary_structure_2.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_hierarchy_atom_sort.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/hybrid_36.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/records.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_read_mtrix_records_from_cif.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_atom_selection_string.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/extract_rfactors_resolutions_sigma.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/secondary_structure.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_hierarchy.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/atom_name_interpretation.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/xray_structure.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/cryst1_interpretation.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/nucleic_acid_codes.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_tls.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/utils.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_atom_selection.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_atom_name_interpretation.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_ext.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_pdb.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/crystal_symmetry_from_pdb.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_mmcif_hierarchy_2.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_hierarchy_flip_symmetric.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_mmcif_hierarchy.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/amino_acid_codes.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/forward_compatible_pdb_cif_conversion.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/pdbe.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/mmcif.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/modified_rna_dna_names.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/hierarchy.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/pdb_v3_cif_conversion.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/aa_utils.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/__init__.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/fetch.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_mmcif.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_secondary_structure.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_utils.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/rcsb.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_hierarchy_flip_symmetric_2.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/experiment_type.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/download.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/remark_2_interpretation.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/remark_3_interpretation.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/web_service_api.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/rna_dna_detection.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb creating /<>/.pybuild/cpython3_3.12/build/iotbx/cif copying iotbx/cif/validation.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/cif copying iotbx/cif/errors.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/cif copying iotbx/cif/geometry.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/cif copying iotbx/cif/citations.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/cif copying iotbx/cif/crystal_symmetry_from_cif.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/cif copying iotbx/cif/restraints.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/cif copying iotbx/cif/builders.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/cif copying iotbx/cif/model.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/cif copying iotbx/cif/__init__.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/cif copying iotbx/cif/cod_tools.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/cif copying iotbx/cif/restraint_file_merge.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/cif creating /<>/.pybuild/cpython3_3.12/build/iotbx/kriber copying iotbx/kriber/strudat.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/kriber copying iotbx/kriber/tst_strudat.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/kriber copying iotbx/kriber/__init__.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/kriber creating /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_pdb_link_records.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_long_resname_1.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_forward_compatible_pdb.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_cif_1.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_tools.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_xray_scale.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_pdb_as_cif.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_sort_atoms.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_poscar.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_reindex.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_pdb_v3.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_crystal_symmetry_from_any.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_long_chain_ids_1.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_phil.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_restraints_merge.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_call_consistency.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_selected_hierarchy_flip.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_miller_sort_asu.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_cif_as_pdb_1atom.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_wildcard.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_model_sharpening_5.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_2.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_phases.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_external_sharpening_7.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_occupancies_rounding.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_mtz_as_cif.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_pdbx_mmcif_tutorial.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_copy_select.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_group_rounding.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_reflection_statistics.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_simple_parser.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_4.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_patterson.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_atom_selections_10k.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_reflection_file_reader.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_split_data_cif.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_lattice_symmetry.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/utils.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_long_resname_4.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_fetch.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_generate_n_char_string.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_id_str.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_pdb_cif_inputs.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_data_manager.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_merging_statistics.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_export_scalepack_unmerged.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_simple_map_coefficients.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_manager_wrapping.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_long_resname_2.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_bioinformatics.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_file_reader.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_csv_utils.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_3.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_manager.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_data_plots.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_examples.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_mmcif_multimodel.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_long_resname_3.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_box_around_molecule.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_extract_xtal_data.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_cli_parser.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_tls_from_map_8.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_reflection_file_utils.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_add_conformations.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/__init__.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_split_models.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_all_chain_ids.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_show_systematic_absences.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_pdb_as_fasta.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_mmcif_segids.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_mmcif_to_from_hierarchy.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_reflection_file_editor.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_symmetry.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression creating /<>/.pybuild/cpython3_3.12/build/iotbx/mrcfile copying iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/mrcfile copying iotbx/mrcfile/__init__.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/mrcfile creating /<>/.pybuild/cpython3_3.12/build/iotbx/programs copying iotbx/programs/split_data_cif.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/programs copying iotbx/programs/box_around_molecule.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/programs copying iotbx/programs/__init__.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/programs copying iotbx/programs/unique_with_biomt.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/programs creating /<>/.pybuild/cpython3_3.12/build/iotbx/PrettyPrint copying iotbx/PrettyPrint/tables.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/PrettyPrint copying iotbx/PrettyPrint/__init__.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/PrettyPrint creating /<>/.pybuild/cpython3_3.12/build/iotbx/data_manager copying iotbx/data_manager/common.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/data_manager copying iotbx/data_manager/restraint.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/data_manager copying iotbx/data_manager/phil.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/data_manager copying iotbx/data_manager/miller_array.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/data_manager copying iotbx/data_manager/real_map.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/data_manager copying iotbx/data_manager/ncs_spec.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/data_manager copying iotbx/data_manager/map_coefficients.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/data_manager copying iotbx/data_manager/sequence.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/data_manager copying iotbx/data_manager/model.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/data_manager copying iotbx/data_manager/__init__.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/data_manager creating /<>/.pybuild/cpython3_3.12/build/iotbx/mtz copying iotbx/mtz/tst_dano.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/mtz copying iotbx/mtz/tst_unmerged.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/mtz copying iotbx/mtz/tst_extract_from_symmetry_lib.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/mtz copying iotbx/mtz/crystal_symmetry_from_mtz.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/mtz copying iotbx/mtz/extract_from_symmetry_lib.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/mtz copying iotbx/mtz/tst_ext.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/mtz copying iotbx/mtz/tst.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/mtz copying iotbx/mtz/__init__.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/mtz copying iotbx/mtz/tst_miller_dict.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/mtz creating /<>/.pybuild/cpython3_3.12/build/iotbx/ncs copying iotbx/ncs/__init__.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/ncs creating /<>/.pybuild/cpython3_3.12/build/iotbx/gui_tools copying iotbx/gui_tools/reflections.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/gui_tools copying iotbx/gui_tools/models.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/gui_tools copying iotbx/gui_tools/import_data_and_flags.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/gui_tools copying iotbx/gui_tools/tst.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/gui_tools copying iotbx/gui_tools/__init__.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/gui_tools copying iotbx/gui_tools/cif_conversions.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/gui_tools creating /<>/.pybuild/cpython3_3.12/build/iotbx/ccp4_map copying iotbx/ccp4_map/crystal_symmetry_from_ccp4_map.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/ccp4_map copying iotbx/ccp4_map/tst.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/ccp4_map copying iotbx/ccp4_map/__init__.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/ccp4_map creating /<>/.pybuild/cpython3_3.12/build/iotbx/bioinformatics copying iotbx/bioinformatics/ncbi_blast_xml.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/bioinformatics copying iotbx/bioinformatics/xmlbuild.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/bioinformatics copying iotbx/bioinformatics/local_blast.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/bioinformatics copying iotbx/bioinformatics/alignment_as_hsearch.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/bioinformatics copying iotbx/bioinformatics/homologues.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/bioinformatics copying iotbx/bioinformatics/pubmed.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/bioinformatics copying iotbx/bioinformatics/pdb_info.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/bioinformatics copying iotbx/bioinformatics/ebi_wu_blast_xml.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/bioinformatics copying iotbx/bioinformatics/__init__.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/bioinformatics copying iotbx/bioinformatics/structure.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/bioinformatics creating /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb.b_factor_stats.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/shelx.as_cif.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/mtz.dump.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/show_distances.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/reindex.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/split_data_cif.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/cbf_read.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/cns.transfer_crystal_symmetry.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/cns.reflection_reader.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/isomorphous_difference_patterson.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/xplor.map.show_summary.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/reflection_file_converter.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/cif.validate.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb.join_fragment_files.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb.box_around_molecule.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/french_wilson.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/simple_map_coefficients.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/reflection_file_editor.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/cns.sdb_reader.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/dano_as_amplitudes.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/crystal_symmetry_from_any.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/reflection_file_reader.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb_get_citation.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/shelx.dump_as_python.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/shelx.as_xray_structure.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb.superpose_centers_of_mass.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb_add_conformations.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb.as_xray_structure.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/phil.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/reflection_statistics.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb.print_sequence.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/mtrix_reconstruction.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb_as_fasta.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/export_scalepack_unmerged.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb.hierarchy.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb.superpose_atoms_by_name.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/flip_symmetric_amino_acids.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/distance_least_squares.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/get_pubmed_citation.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/build_phil_cache.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb_remediator.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/biomt_reconstruction.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/file_reader.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/poscar_as_xray_structure.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/sort_atoms.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb_labels_diff.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/detector_image_as_png.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb_show_connectivity.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/cif_as_pdb.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/explore_metric_symmetry.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/merging_statistics.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/effective_resolution.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/dtrek.to_cns.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/r_free_flags_as_cns.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/symmetry_search.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/r_free_flags_accumulation.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/emma.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/lattice_symmetry.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/csv_as_mtz.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb.link_as_geometry_restraints_edits.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/cif.as_miller_arrays.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/r_free_flags_completion_simple.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb.insert_scale_records.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb_labels_comparison.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/__init__.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb_split_models.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb_as_cif.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/show_systematic_absences.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/mtz_as_cif.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/blast_pdb.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/cif.as_xray_structure.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/cns_as_mtz.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/unique_with_biomt.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/patterson_map.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/command_line creating /<>/.pybuild/cpython3_3.12/build/iotbx/fullprof copying iotbx/fullprof/write_pcr.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/fullprof copying iotbx/fullprof/read_pcr.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/fullprof copying iotbx/fullprof/__init__.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/fullprof creating /<>/.pybuild/cpython3_3.12/build/iotbx/dsn6 copying iotbx/dsn6/tst.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/dsn6 copying iotbx/dsn6/__init__.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/dsn6 creating /<>/.pybuild/cpython3_3.12/build/iotbx/xplor copying iotbx/xplor/map.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/xplor copying iotbx/xplor/tst_xplormap.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/xplor copying iotbx/xplor/ext.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/xplor copying iotbx/xplor/crystal_symmetry_from_map.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/xplor copying iotbx/xplor/__init__.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/xplor creating /<>/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/geometry.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/xds_cbf.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/crystal_symmetry_from_hkl.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/integrate_hkl.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/blank_cbf.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/xds_inp.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/correction.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/read_ascii.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/spot_xds.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/__init__.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/xparm.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/gain_cbf.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/xds creating /<>/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/crystal_symmetry_from_sdb.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/space_group_symbols.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/xray_structure.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/sdb_writer.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/pdb_remarks.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/miller_array.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/reflection_reader.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/crystal_symmetry_utils.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/sdb_reader.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/crystal_symmetry_from_inp.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/tst_cns.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/index_fobs_sigma_reader.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/__init__.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/cns creating /<>/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/tst_lex_parse_build.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/crystal_symmetry_from_ins.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/errors.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/tokens.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/tst_hklf.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/lexer.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/writer.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/write_ins.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/parsers.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/tst_fvar_encoding.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/hklf.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/tst_writer.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/fvar_encoding.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/fcf.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/shelx creating /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/util copying iotbx/detectors/util/filters.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/util copying iotbx/detectors/util/__init__.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/util creating /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/context copying iotbx/detectors/context/config_detector.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/context copying iotbx/detectors/context/endstation_max_iv_trial.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/context copying iotbx/detectors/context/endstation.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/context copying iotbx/detectors/context/spot_xy_convention.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/context copying iotbx/detectors/context/camera_convention.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/context copying iotbx/detectors/context/__init__.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/context creating /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/remediation copying iotbx/pdb/remediation/remediator.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/remediation copying iotbx/pdb/remediation/__init__.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/remediation copying iotbx/pdb/remediation/tst_remediator.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/remediation creating /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_user_selections.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_input.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_groups_preprocessing.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_search_ligs.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_mmcif_biomt_reduction_output.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/__init__.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_reordered_chains.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_search_broken_chain.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_without_validation.py -> /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs creating /<>/.pybuild/cpython3_3.12/build/libtbx/sphinx copying libtbx/sphinx/phil.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/sphinx copying libtbx/sphinx/python_string.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/sphinx copying libtbx/sphinx/pubmed.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/sphinx copying libtbx/sphinx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/sphinx creating /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/mp_handler.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/file_queue.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/thread_handler.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/result.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/cluster_handler.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/shared_resource.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/stacktrace.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/process_pool.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/socket_queue.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/mainthread.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/philgen.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/__init__.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/job_scheduler.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/parallel_for.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling creating /<>/.pybuild/cpython3_3.12/build/libtbx/bundle copying libtbx/bundle/copy_all.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/bundle copying libtbx/bundle/copy_build_libtbx.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/bundle copying libtbx/bundle/install_bat.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/bundle copying libtbx/bundle/install_csh.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/bundle copying libtbx/bundle/copy_runtime_sources.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/bundle copying libtbx/bundle/utils.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/bundle copying libtbx/bundle/__init__.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/bundle creating /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/scheduling_helpers.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/lsf.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/remote.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/pbs_utils.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/scheduling.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/looping.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/tst.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/communication.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/generic.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/__init__.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/sge_utils.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils creating /<>/.pybuild/cpython3_3.12/build/libtbx/development copying libtbx/development/except_Exception.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/development copying libtbx/development/xcode_build_phase.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/development copying libtbx/development/timers.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/development copying libtbx/development/__init__.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/development creating /<>/.pybuild/cpython3_3.12/build/libtbx/program_utils copying libtbx/program_utils/result.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/program_utils copying libtbx/program_utils/statistics_info.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/program_utils copying libtbx/program_utils/__init__.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/program_utils creating /<>/.pybuild/cpython3_3.12/build/libtbx/test_utils copying libtbx/test_utils/parallel.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/test_utils copying libtbx/test_utils/__init__.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/test_utils copying libtbx/test_utils/pytest.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/test_utils creating /<>/.pybuild/cpython3_3.12/build/libtbx/server copying libtbx/server/FileServer.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/server copying libtbx/server/SocketServer.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/server copying libtbx/server/StartServer.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/server copying libtbx/server/FileClient.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/server copying libtbx/server/__init__.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/server copying libtbx/server/FileSocket.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/server creating /<>/.pybuild/cpython3_3.12/build/libtbx/phil copying libtbx/phil/tst_experimental.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/phil copying libtbx/phil/tokenizer.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/phil copying libtbx/phil/gui_objects.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/phil copying libtbx/phil/tst_tokenizer.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/phil copying libtbx/phil/tst_interface.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/phil copying libtbx/phil/command_line.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/phil copying libtbx/phil/interface.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/phil copying libtbx/phil/parser.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/phil copying libtbx/phil/experimental.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/phil copying libtbx/phil/tst.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/phil copying libtbx/phil/__init__.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/phil creating /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/prime_factors_of.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/epydoc_run.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_build_path.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/install.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/check_libcpp.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/start_binary_bundle.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/help.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/dtrace.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_bin_path.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/create_install_script_bat.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/clean_clutter.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/chunk.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/start_process.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_dist_paths.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_tests.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/list_modules.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/find_files.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/assert_not_show_diff.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/sge_qstat_counts.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_env.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/sge_available_slots.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/install_conda.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/path_utility.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/py_compile_all.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/find_in_repositories.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_build_options.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/phil.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/make_sphinx_html.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_host_and_user.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/seconds_since_the_epoch.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/scons.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/printenv.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/raise_exception_for_testing.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/git_avoid_merges.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_number_of_processors.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_module_dependencies.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/import_all_ext.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/create_installer.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/create_mac_app.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_pythonpath.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_include_paths.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/analyse_code_comments.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/add_from_future_import_division.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/list_source_files_sorted_by_size.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_lib_path.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/env_run.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/nequal.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/find_unused_imports_crude.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/find_reserved_names.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/list_files.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_commands.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/line_count.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_numpy_version.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/find_untested.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_full_command_path.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/create_unzipsfx.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/remote_processing.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_numeric_version.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/run_pickled_function.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_variable_names.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_all_on_path.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/create_selfx.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/clear_paths.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/assert_line_count.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/make_dist.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/sphinx_build.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/import_all_python.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/run_tests_parallel.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/ipython_shell_start.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_environ_usage.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/assert_stdin.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/extract_code_from_txt.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/find_old_style_classes.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/easy_qsub.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_but_no_repr.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_python_sys_executable.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/create_windows_exe.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/__init__.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/wait_for_file.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/parallel_simple.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/find_unused_imports.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/find_under_build.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/bootstrap.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/create_cctbx_bundle_for_installer.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/assert_stdin_contains_strings.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/remove_tree.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/bundle_as_exe.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_repository_paths.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/find_clutter.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_date_and_time.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/any2unix.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/assert_stdin_ends_with.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_python_dependencies.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/command_line creating /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/create_mac_pkg.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/setup_installer.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/rpath.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/install_distribution.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/create_windows_installer.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/install_conda.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/create_installer.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/create_mac_app.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/package_defs.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/install_base_packages.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/write_gui_dispatcher_include.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/create_windows_exe.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/__init__.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/installer_utils.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/regenerate_module_files.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/bootstrap.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/create_cctbx_bundle_for_installer.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/plus_installer.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/make_bundle.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build creating /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/polling.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/transfer.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/errors.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/util.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/status.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/submission.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/__init__.py -> /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing creating /<>/.pybuild/cpython3_3.12/build/cudatbx creating /<>/.pybuild/cpython3_3.12/build/cudatbx/math copying cudatbx/math/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cudatbx/math creating /<>/.pybuild/cpython3_3.12/build/cudatbx/cufft copying cudatbx/cufft/tst_ext.py -> /<>/.pybuild/cpython3_3.12/build/cudatbx/cufft copying cudatbx/cufft/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cudatbx/cufft creating /<>/.pybuild/cpython3_3.12/build/cudatbx/scattering copying cudatbx/scattering/tst_direct_summation.py -> /<>/.pybuild/cpython3_3.12/build/cudatbx/scattering copying cudatbx/scattering/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cudatbx/scattering creating /<>/.pybuild/cpython3_3.12/build/cudatbx/math/special_functions copying cudatbx/math/special_functions/tst_spherical_bessel_jn.py -> /<>/.pybuild/cpython3_3.12/build/cudatbx/math/special_functions copying cudatbx/math/special_functions/__init__.py -> /<>/.pybuild/cpython3_3.12/build/cudatbx/math/special_functions creating /<>/.pybuild/cpython3_3.12/build/qttbx/viewers copying qttbx/viewers/chimerax.py -> /<>/.pybuild/cpython3_3.12/build/qttbx/viewers copying qttbx/viewers/__init__.py -> /<>/.pybuild/cpython3_3.12/build/qttbx/viewers creating /<>/.pybuild/cpython3_3.12/build/prime creating /<>/.pybuild/cpython3_3.12/build/prime/index_ambiguity copying prime/index_ambiguity/mod_lbfgs.py -> /<>/.pybuild/cpython3_3.12/build/prime/index_ambiguity copying prime/index_ambiguity/mod_kmeans.py -> /<>/.pybuild/cpython3_3.12/build/prime/index_ambiguity copying prime/index_ambiguity/mod_indexing_ambiguity.py -> /<>/.pybuild/cpython3_3.12/build/prime/index_ambiguity copying prime/index_ambiguity/__init__.py -> /<>/.pybuild/cpython3_3.12/build/prime/index_ambiguity creating /<>/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_misc.py -> /<>/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_pdb.py -> /<>/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_threads.py -> /<>/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_results.py -> /<>/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_gui_dialogs.py -> /<>/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_lbfgs.py -> /<>/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_gui_frames.py -> /<>/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_merge_data.py -> /<>/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_util.py -> /<>/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_mx.py -> /<>/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_input.py -> /<>/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_leastsqr.py -> /<>/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_run.py -> /<>/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_lbfgs_partiality.py -> /<>/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_perf.py -> /<>/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_partiality.py -> /<>/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_outlier.py -> /<>/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_plotter.py -> /<>/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/__init__.py -> /<>/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/postrefine.py -> /<>/.pybuild/cpython3_3.12/build/prime/postrefine creating /<>/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/plot_energy_spectrum.py -> /<>/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/spot_param_visualizer.py -> /<>/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/viewstats.py -> /<>/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/mpi_scale.py -> /<>/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/change_basis.py -> /<>/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/run.py -> /<>/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/r_mtz_mtz.py -> /<>/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/plotstats.py -> /<>/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/prime_gui.py -> /<>/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/solve_indexing_ambiguity.py -> /<>/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/mpi_run.py -> /<>/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/ray_trace.py -> /<>/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/comparestats.py -> /<>/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/view_fineslices.py -> /<>/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/frame_extractor_by_scan.py -> /<>/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/change_path_indexing_ambiguity.py -> /<>/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/print_integration_pickle.py -> /<>/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/cluster_isoform.py -> /<>/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/explore_twin_operators.py -> /<>/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/compare_solution_pickles.py -> /<>/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/__init__.py -> /<>/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/iotacc.py -> /<>/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/postrefine.py -> /<>/.pybuild/cpython3_3.12/build/prime/command_line creating /<>/.pybuild/cpython3_3.12/build/prime/isoform_cluster copying prime/isoform_cluster/mod_isoform_cluster.py -> /<>/.pybuild/cpython3_3.12/build/prime/isoform_cluster copying prime/isoform_cluster/__init__.py -> /<>/.pybuild/cpython3_3.12/build/prime/isoform_cluster creating /<>/.pybuild/cpython3_3.12/build/gltbx/command_line copying gltbx/command_line/__init__.py -> /<>/.pybuild/cpython3_3.12/build/gltbx/command_line copying gltbx/command_line/try_imports.py -> /<>/.pybuild/cpython3_3.12/build/gltbx/command_line creating /<>/.pybuild/cpython3_3.12/build/rstbx/outlier_spots copying rstbx/outlier_spots/fit_distribution.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/outlier_spots copying rstbx/outlier_spots/__init__.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/outlier_spots creating /<>/.pybuild/cpython3_3.12/build/rstbx/detectors copying rstbx/detectors/silicon.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/detectors copying rstbx/detectors/__init__.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/detectors creating /<>/.pybuild/cpython3_3.12/build/rstbx/cftbx copying rstbx/cftbx/tst_coordinate_frame_converter.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/cftbx copying rstbx/cftbx/coordinate_frame_converter.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/cftbx copying rstbx/cftbx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/cftbx copying rstbx/cftbx/coordinate_frame_helpers.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/cftbx creating /<>/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/integration.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/results_base.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/calibration.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/spotfinder_frame.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/controls.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/frame.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/calibration_frame.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/processing.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/tst.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/drivers.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/dataset.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/spotfinder_wrap.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/display.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/indexing.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/pixels3d.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/__init__.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/viewer creating /<>/.pybuild/cpython3_3.12/build/rstbx/bandpass copying rstbx/bandpass/simulated_annealing.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/bandpass copying rstbx/bandpass/__init__.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/bandpass creating /<>/.pybuild/cpython3_3.12/build/rstbx/new_horizons copying rstbx/new_horizons/spot_shape.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/new_horizons copying rstbx/new_horizons/pixel_spread.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/new_horizons copying rstbx/new_horizons/index.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/new_horizons copying rstbx/new_horizons/stats_index.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/new_horizons copying rstbx/new_horizons/oscillation_shots.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/new_horizons copying rstbx/new_horizons/__init__.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/new_horizons copying rstbx/new_horizons/speckfinder.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/new_horizons creating /<>/.pybuild/cpython3_3.12/build/rstbx/dials_core copying rstbx/dials_core/__init__.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/dials_core copying rstbx/dials_core/integration_core.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/dials_core creating /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer copying rstbx/slip_viewer/uc_frame.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer copying rstbx/slip_viewer/ring_frame.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer copying rstbx/slip_viewer/pyslip.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer copying rstbx/slip_viewer/frame.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer copying rstbx/slip_viewer/slip_viewer_image_factory.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer copying rstbx/slip_viewer/tile_generation.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer copying rstbx/slip_viewer/calibration_frame.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer copying rstbx/slip_viewer/slip_display.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer copying rstbx/slip_viewer/example_frame_plugin_hidden.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer copying rstbx/slip_viewer/__init__.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer copying rstbx/slip_viewer/score_frame.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer creating /<>/.pybuild/cpython3_3.12/build/rstbx/apps copying rstbx/apps/slip_helpers.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/apps copying rstbx/apps/dual_resolution_helpers.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/apps copying rstbx/apps/spot_markup.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/apps copying rstbx/apps/__init__.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/apps creating /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx copying rstbx/bpcx/ersatz_misset.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx copying rstbx/bpcx/uc1_2_positions_idx.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx copying rstbx/bpcx/uc1_2a.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx copying rstbx/bpcx/compare_mosflm_xds.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx copying rstbx/bpcx/uc1_2.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx copying rstbx/bpcx/uc1_2_validate.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx copying rstbx/bpcx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx copying rstbx/bpcx/uc1_2_positions.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx creating /<>/.pybuild/cpython3_3.12/build/rstbx/indexing copying rstbx/indexing/tst_auto_monoscan.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/indexing copying rstbx/indexing/tst_dataset1.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/indexing copying rstbx/indexing/do_index.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/indexing copying rstbx/indexing/__init__.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/indexing creating /<>/.pybuild/cpython3_3.12/build/rstbx/simage copying rstbx/simage/run_spotfinder.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/simage copying rstbx/simage/wx_display.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/simage copying rstbx/simage/solver.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/simage copying rstbx/simage/integrate_crude.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/simage copying rstbx/simage/refine_uc_cr.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/simage copying rstbx/simage/tst.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/simage copying rstbx/simage/create.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/simage copying rstbx/simage/__init__.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/simage copying rstbx/simage/run_labelit_index.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/simage copying rstbx/simage/explore_completeness.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/simage creating /<>/.pybuild/cpython3_3.12/build/rstbx/sublattice_support copying rstbx/sublattice_support/change_basis.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/sublattice_support copying rstbx/sublattice_support/tst_sublattice.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/sublattice_support copying rstbx/sublattice_support/__init__.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/sublattice_support creating /<>/.pybuild/cpython3_3.12/build/rstbx/phil copying rstbx/phil/phil_preferences.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/phil copying rstbx/phil/preferences.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/phil copying rstbx/phil/scope.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/phil copying rstbx/phil/__init__.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/phil creating /<>/.pybuild/cpython3_3.12/build/rstbx/indexing_api copying rstbx/indexing_api/force_cell.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/indexing_api copying rstbx/indexing_api/nearest_neighbor.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/indexing_api copying rstbx/indexing_api/outlier_detection.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/indexing_api copying rstbx/indexing_api/outlier_procedure.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/indexing_api copying rstbx/indexing_api/test_dps.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/indexing_api copying rstbx/indexing_api/sampling.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/indexing_api copying rstbx/indexing_api/tools.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/indexing_api copying rstbx/indexing_api/lattice.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/indexing_api copying rstbx/indexing_api/basis_choice.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/indexing_api copying rstbx/indexing_api/__init__.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/indexing_api creating /<>/.pybuild/cpython3_3.12/build/rstbx/array_family copying rstbx/array_family/flex.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/array_family copying rstbx/array_family/__init__.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/array_family creating /<>/.pybuild/cpython3_3.12/build/rstbx/dps_core copying rstbx/dps_core/cell_assessment.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/dps_core copying rstbx/dps_core/zuoreduction.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/dps_core copying rstbx/dps_core/constrainment.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/dps_core copying rstbx/dps_core/sampling.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/dps_core copying rstbx/dps_core/lepage.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/dps_core copying rstbx/dps_core/basis_choice.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/dps_core copying rstbx/dps_core/__init__.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/dps_core copying rstbx/dps_core/tst_iotbx_converter.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/dps_core creating /<>/.pybuild/cpython3_3.12/build/rstbx/command_line copying rstbx/command_line/simage.explore_completeness.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/command_line copying rstbx/command_line/index.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/command_line copying rstbx/command_line/simage.solver.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/command_line copying rstbx/command_line/viewer.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/command_line copying rstbx/command_line/example_viewer.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/command_line copying rstbx/command_line/slip_viewer.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/command_line copying rstbx/command_line/simage.create.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/command_line copying rstbx/command_line/__init__.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/command_line copying rstbx/command_line/simage.wx_display.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/command_line creating /<>/.pybuild/cpython3_3.12/build/rstbx/diffraction copying rstbx/diffraction/tst_ewald_sphere.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/diffraction copying rstbx/diffraction/tst_predict.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/diffraction copying rstbx/diffraction/tst_partial_derivatives.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/diffraction copying rstbx/diffraction/__init__.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/diffraction creating /<>/.pybuild/cpython3_3.12/build/rstbx/simulation copying rstbx/simulation/constants.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/simulation copying rstbx/simulation/sim_utils.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/simulation copying rstbx/simulation/__init__.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/simulation copying rstbx/simulation/sim_pdf.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/simulation copying rstbx/simulation/tst_xfel1_simple.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/simulation creating /<>/.pybuild/cpython3_3.12/build/rstbx/symmetry copying rstbx/symmetry/subgroup.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/symmetry copying rstbx/symmetry/sgtbx_adaptor.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/symmetry copying rstbx/symmetry/__init__.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/symmetry creating /<>/.pybuild/cpython3_3.12/build/rstbx/apps/stills copying rstbx/apps/stills/simple_integration.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/apps/stills copying rstbx/apps/stills/deltapsi_refinement_preceding_integration.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/apps/stills copying rstbx/apps/stills/dials_refinement_preceding_integration.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/apps/stills copying rstbx/apps/stills/util.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/apps/stills copying rstbx/apps/stills/stills_integration.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/apps/stills copying rstbx/apps/stills/__init__.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/apps/stills creating /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model copying rstbx/bpcx/detector_model/detector.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model copying rstbx/bpcx/detector_model/tst_detector_model.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model copying rstbx/bpcx/detector_model/instrument_specifics.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model copying rstbx/bpcx/detector_model/__init__.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model creating /<>/.pybuild/cpython3_3.12/build/rstbx/diffraction/fastbragg copying rstbx/diffraction/fastbragg/tst_utils_clustering.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/diffraction/fastbragg copying rstbx/diffraction/fastbragg/__init__.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/diffraction/fastbragg copying rstbx/diffraction/fastbragg/tst_bragg_minimal.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/diffraction/fastbragg creating /<>/.pybuild/cpython3_3.12/build/rstbx/symmetry/constraints copying rstbx/symmetry/constraints/g_gradients.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/symmetry/constraints copying rstbx/symmetry/constraints/parameter_reduction.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/symmetry/constraints copying rstbx/symmetry/constraints/__init__.py -> /<>/.pybuild/cpython3_3.12/build/rstbx/symmetry/constraints creating /<>/.pybuild/cpython3_3.12/build/serialtbx/mono_simulation copying serialtbx/mono_simulation/max_like.py -> /<>/.pybuild/cpython3_3.12/build/serialtbx/mono_simulation copying serialtbx/mono_simulation/util.py -> /<>/.pybuild/cpython3_3.12/build/serialtbx/mono_simulation copying serialtbx/mono_simulation/__init__.py -> /<>/.pybuild/cpython3_3.12/build/serialtbx/mono_simulation creating /<>/.pybuild/cpython3_3.12/build/serialtbx/detector copying serialtbx/detector/jungfrau.py -> /<>/.pybuild/cpython3_3.12/build/serialtbx/detector copying serialtbx/detector/rayonix.py -> /<>/.pybuild/cpython3_3.12/build/serialtbx/detector copying serialtbx/detector/xtc.py -> /<>/.pybuild/cpython3_3.12/build/serialtbx/detector copying serialtbx/detector/__init__.py -> /<>/.pybuild/cpython3_3.12/build/serialtbx/detector copying serialtbx/detector/cspad.py -> /<>/.pybuild/cpython3_3.12/build/serialtbx/detector creating /<>/.pybuild/cpython3_3.12/build/serialtbx/util copying serialtbx/util/time.py -> /<>/.pybuild/cpython3_3.12/build/serialtbx/util copying serialtbx/util/construct_frame.py -> /<>/.pybuild/cpython3_3.12/build/serialtbx/util copying serialtbx/util/__init__.py -> /<>/.pybuild/cpython3_3.12/build/serialtbx/util copying serialtbx/util/energy_scan_notch_finder.py -> /<>/.pybuild/cpython3_3.12/build/serialtbx/util creating /<>/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology copying serialtbx/detector/legacy_metrology/metrology.py -> /<>/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology copying serialtbx/detector/legacy_metrology/generic_detector.py -> /<>/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology copying serialtbx/detector/legacy_metrology/__init__.py -> /<>/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology copying serialtbx/detector/legacy_metrology/cspad_detector.py -> /<>/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology # build the dxtbx python module dh_auto_build --sourcedirectory=dxtbx pybuild --build -i python{version} -p 3.12 --dir dxtbx I: pybuild base:305: /usr/bin/python3 setup.py build Found 20 dxtbx dispatchers Found 134 Format classes running build running build_py creating /<>/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/flumpy.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/imageset.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/version.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/ext.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/datablock.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/__init__.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/sequence_filenames.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/filecache.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/filecache_controller.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx creating /<>/.pybuild/cpython3_3.12/build/dxtbx/nexus copying src/dxtbx/nexus/__init__.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/nexus creating /<>/.pybuild/cpython3_3.12/build/dxtbx/masking copying src/dxtbx/masking/SmarGonShadowMask.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/masking copying src/dxtbx/masking/__init__.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/masking creating /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatTIFFRayonixESRF.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNexusJungfrauExt.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatHDF5Sacla.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatXTC.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSER.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusSOLEILPX16MSN106.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI41.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatMultiImage.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEigerPhotonFactory.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCmlfsom.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFFullPilatusDLS6MSN126.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEigerDLS16MSN160.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniADSCHF4M.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNexus.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFCspad.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatXTCEpix.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuSaturnSN09040159.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigaku.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuSaturnSN11480296.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI7d.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuSaturnSN07400090.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatTIFFBruker.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMultiTileHierarchy.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatHDF5SaclaRayonix.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatBrukerPhoton.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNXmxDLS16M.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNXmxEigerFilewriter.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNXmxDLSI19_2.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI31.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDESY6MSN115.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusCHESS_6MSN127.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatTIFF.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNexusJungfrauHack.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN915.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatRAXISIVSpring8.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatROD.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatPYunspecified.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVHamamatsuSPring8BL32XU.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVNOIR.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatRAXIS.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatXDS.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCDBG.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuA200SPring8BL26B1.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatStill.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatXTCMultipleDetectors.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatTIFFRayonix.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusHelpers.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN928.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuA200.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatXTCCspad.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCNoDateStamp.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVHamamatsu.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatBrukerFixedChi.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNXmxEigerFilewriterESRFID232.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFFullPilatusDLS300KSN104.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMini.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN445.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatTIFFRayonixXPP.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/Format.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNXmxDLS.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEigerMaxIVBio.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNXmxDLS16MI03.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEiger.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI71.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatMRC.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFFull.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVJHSim.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatEDFALS733.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI51.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSNAPSID19.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatGatanDM4.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuPilatus.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatHDF5Lambda.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVTimePix_SU.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDLS12M.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatPYunspecifiedStill.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSC.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatus3APS19ID6MSN132.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatPilatusHelpers.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatDIP2030b.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatBruker.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEigerPetraP14.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatHDF5EigerNearlyNexus.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatPYmultitile.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMV.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMultiTile.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatMarIP.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBF.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFFullPilatus.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN457.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatMultiImageLazy.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatPY.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVCMOS1.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDLS6MSN126.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI61.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/nxmx_writer.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN920.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatHDF5.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatHDF5PAL.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNXmx.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuEiger.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNXmxED.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN926.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDLS6MSN119.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatXTCRayonix.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatTIFFHelpers.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatHDF5EigerNearlyNexusSPring8.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/__init__.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNexusTimepix2M.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/nexus.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuSaturnNoTS.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuSaturn.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusXXX.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/Registry.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatHDF5SaclaMPCCD.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN905.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatXTCJungfrau.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEigerChessID7B2.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI32.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114DMM.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN442.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatRAXISII.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/cbf_writer.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFFullPilatusDLS6MSN100.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatus.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFFullByteOffset.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/image.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatTIFFRayonixSPring8.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format creating /<>/.pybuild/cpython3_3.12/build/dxtbx/util copying src/dxtbx/util/dlsnxs2cbf.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/util copying src/dxtbx/util/rotate_and_average.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/util copying src/dxtbx/util/__init__.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/util creating /<>/.pybuild/cpython3_3.12/build/dxtbx/serialize copying src/dxtbx/serialize/imageset.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/serialize copying src/dxtbx/serialize/filename.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/serialize copying src/dxtbx/serialize/load.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/serialize copying src/dxtbx/serialize/xds.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/serialize copying src/dxtbx/serialize/__init__.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/serialize creating /<>/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/compare.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/detector.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/detector_helpers.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/scan.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/detector_helpers_types.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/goniometer.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/crystal.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/scan_helpers.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/profile.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/__init__.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/experiment_list.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/beam.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model creating /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/show_registry.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/install_format.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/debug_memory.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/depends_on.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/plot_detector_models.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/image_average.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/dlsnxs2cbf.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/detector_superpose.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/saturation.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/print_matching_images.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/show_matching_formats.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/image2pickle.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/show_mask_info.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/overload.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/read_sequence.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/print_header.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/__init__.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/display_parallax_correction.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/radial_average.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line creating /<>/.pybuild/cpython3_3.12/build/dxtbx/data copying src/dxtbx/data/__init__.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/data creating /<>/.pybuild/cpython3_3.12/build/dxtbx/data/beamline_defs copying src/dxtbx/data/beamline_defs/PILATUS_300K_S_N_3_0104_Diamond.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/data/beamline_defs copying src/dxtbx/data/beamline_defs/__init__.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/data/beamline_defs copying src/dxtbx/data/beamline_defs/PILATUS_2M_S_N_24_0107_Diamond.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/data/beamline_defs copying src/dxtbx/CMakeLists.txt -> /<>/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/error.h -> /<>/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/imageset.h -> /<>/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/dxtbx_format_image_ext.pyi -> /<>/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/dxtbx_ext.pyi -> /<>/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/dxtbx_model_ext.pyi -> /<>/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/dxtbx_masking_ext.pyi -> /<>/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/py.typed -> /<>/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/dxtbx_imageset_ext.pyi -> /<>/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/dxtbx_format_nexus_ext.pyi -> /<>/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/dxtbx_flumpy.pyi -> /<>/.pybuild/cpython3_3.12/build/dxtbx creating /<>/.pybuild/cpython3_3.12/build/dxtbx/array_family copying src/dxtbx/array_family/flex_table_suite.h -> /<>/.pybuild/cpython3_3.12/build/dxtbx/array_family copying src/dxtbx/array_family/flex_table.h -> /<>/.pybuild/cpython3_3.12/build/dxtbx/array_family copying src/dxtbx/array_family/ref_pickle_double_buffered.h -> /<>/.pybuild/cpython3_3.12/build/dxtbx/array_family creating /<>/.pybuild/cpython3_3.12/build/dxtbx/boost_python copying src/dxtbx/boost_python/compression.h -> /<>/.pybuild/cpython3_3.12/build/dxtbx/boost_python copying src/dxtbx/boost_python/compression.cc -> /<>/.pybuild/cpython3_3.12/build/dxtbx/boost_python copying src/dxtbx/boost_python/flumpy.cc -> /<>/.pybuild/cpython3_3.12/build/dxtbx/boost_python copying src/dxtbx/boost_python/ext.cpp -> /<>/.pybuild/cpython3_3.12/build/dxtbx/boost_python copying src/dxtbx/boost_python/imageset_ext.cc -> /<>/.pybuild/cpython3_3.12/build/dxtbx/boost_python creating /<>/.pybuild/cpython3_3.12/build/dxtbx/example copying src/dxtbx/example/to_xds.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/example copying src/dxtbx/example/resolution_corners.py -> /<>/.pybuild/cpython3_3.12/build/dxtbx/example copying src/dxtbx/masking/masking.h -> /<>/.pybuild/cpython3_3.12/build/dxtbx/masking copying src/dxtbx/masking/goniometer_shadow_masking.h -> /<>/.pybuild/cpython3_3.12/build/dxtbx/masking copying src/dxtbx/masking/SConscript -> /<>/.pybuild/cpython3_3.12/build/dxtbx/masking creating /<>/.pybuild/cpython3_3.12/build/dxtbx/masking/boost_python copying src/dxtbx/masking/boost_python/ext.cc -> /<>/.pybuild/cpython3_3.12/build/dxtbx/masking/boost_python copying src/dxtbx/format/README.md -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/image.h -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format creating /<>/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python copying src/dxtbx/format/boost_python/nexus_ext.cc -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python copying src/dxtbx/format/boost_python/cbf_read_buffer.h -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python copying src/dxtbx/format/boost_python/image_ext.cc -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python copying src/dxtbx/format/boost_python/cbf_read_buffer.cpp -> /<>/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python copying src/dxtbx/model/model_helpers.h -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/scan_helpers.h -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/ray_intersection.h -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/panel_data.h -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/spectrum.h -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/pixel_to_millimeter.h -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/goniometer.h -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/parallax_correction.h -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/virtual_panel.h -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/kappa_goniometer.h -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/experiment.h -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/beam.h -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/multi_axis_goniometer.h -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/detector.h -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/scan.h -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/panel.h -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/experiment_list.h -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/crystal.h -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model creating /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/goniometer.cc -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/panel.cc -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/to_from_dict.h -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/multi_axis_goniometer.cc -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/parallax_correction.cc -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/detector.cc -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/experiment.cc -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/kappa_goniometer.cc -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/pixel_to_millimeter.cc -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/spectrum.cc -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/pickle_suite.h -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/beam.cc -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/scan.cc -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/crystal.cc -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/model_ext.cc -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/scan_helpers.cc -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/experiment_list.cc -> /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/data/detectors.lib -> /<>/.pybuild/cpython3_3.12/build/dxtbx/data # build the cctbx extensions and libraries dh_auto_build -- -s custom --build-args="cd {build_dir}_ && ./bin/libtbx.scons -j 4 " pybuild --build -i python{version} -p 3.12 -s custom "--build-args=cd {build_dir}_ && ./bin/libtbx.scons -j 4 " I: pybuild base:305: cd '/<>/.pybuild/cpython3_3.12/build'_ && ./bin/libtbx.scons -j 4 scons: Reading SConscript files ... /<>/libtbx/SConscript:1401: SyntaxWarning: invalid escape sequence '\.' cuda_version = re.findall('release [0-9]+\.*[0-9]+', line) libtbx.scons: using flags from initial environment: CXXFLAGS = -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 CFLAGS = -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 CPPFLAGS = -Wdate-time -D_FORTIFY_SOURCE=3 LDFLAGS = -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 libtbx.scons: OpenMP is disabled. BOOST_PYTHON_LIB_VERSION: boost_python312 BOOST_NUMPY_LIB_VERSION: boost_numpy312 BOOST_VERSION: 108300 Ignored: [Errno 2] No such file or directory: '/<>/.pybuild/cpython3_3.12/build_/exe_dev/cbflib.tst_memory' Ignored: [Errno 2] No such file or directory: '/<>/.pybuild/cpython3_3.12/build_/exe_dev/cctbx.getting_started' Ignored: [Errno 2] No such file or directory: '/<>/.pybuild/cpython3_3.12/build_/exe_dev/cctbx.sym_equiv_sites' Ignored: [Errno 2] No such file or directory: '/<>/.pybuild/cpython3_3.12/build_/exe_dev/cctbx.convert_ccp4_symop_lib' Ignored: [Errno 2] No such file or directory: '/<>/.pybuild/cpython3_3.12/build_/exe_dev/cctbx.lattice_symmetry' Ignored: [Errno 2] No such file or directory: '/<>/.pybuild/cpython3_3.12/build_/exe_dev/cctbx.find_distances' Ignored: [Errno 2] No such file or directory: '/<>/.pybuild/cpython3_3.12/build_/exe_dev/cctbx.sys_abs_equiv_space_groups' scons: done reading SConscript files. scons: Building targets ... g++ -o annlib_adaptbx/ann/ann_adaptor.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/<> -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -Iannlib_adaptbx/src -I/<>/annlib_adaptbx/src -Iannlib_adaptbx/include -I/<>/annlib_adaptbx/include /<>/annlib_adaptbx/ann/ann_adaptor.cpp g++ -o annlib_adaptbx/ann/boost_python/annlib_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/usr/include/python3.12 -Iannlib_adaptbx/ann/boost_python/src -I/<>/annlib_adaptbx/ann/boost_python/src -Iannlib_adaptbx/ann/boost_python/include -I/<>/annlib_adaptbx/ann/boost_python/include /<>/annlib_adaptbx/ann/boost_python/annlib_ext.cpp g++ -o cctbx/maptbx/blobs_cmd.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/cctbx/maptbx/blobs_cmd.cpp g++ -o cctbx/maptbx/asymmetric_map.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/cctbx/maptbx/asymmetric_map.cpp g++ -o cctbx/maptbx/skeletons.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/cctbx/maptbx/skeletons.cpp g++ -o cctbx/maptbx/dijkstra.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/cctbx/maptbx/dijkstra.cpp g++ -o iotbx/xplor/map_reader.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/iotbx/xplor/map_reader.cpp g++ -o iotbx/xplor/map_writer.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/iotbx/xplor/map_writer.cpp g++ -o cctbx/sgtbx/direct_space_asu/proto/cut.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/cctbx/sgtbx/direct_space_asu/proto/cut.cpp g++ -o lib/libiotbx_xplor.so.0.0.1 -shared -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libiotbx_xplor.so.0 iotbx/xplor/map_reader.o iotbx/xplor/map_writer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lm Create symlinks for: 'lib/libiotbx_xplor.so.0.0.1' 'lib/libiotbx_xplor.so.0'->'lib/libiotbx_xplor.so.0.0.1' 'lib/libiotbx_xplor.so'->'lib/libiotbx_xplor.so.0.0.1' g++ -o cctbx/sgtbx/direct_space_asu/proto/reference_table.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/cctbx/sgtbx/direct_space_asu/proto/reference_table.cpp g++ -o cctbx/sgtbx/direct_space_asu/proto/direct_space_asu.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/cctbx/sgtbx/direct_space_asu/proto/direct_space_asu.cpp g++ -o cctbx/eltbx/basic.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/cctbx/eltbx/basic.cpp g++ -o cctbx/eltbx/xray_scattering/it1992.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/cctbx/eltbx/xray_scattering/it1992.cpp g++ -o cctbx/eltbx/xray_scattering/wk1995.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/cctbx/eltbx/xray_scattering/wk1995.cpp g++ -o cctbx/eltbx/xray_scattering/n_gaussian_raw.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/cctbx/eltbx/xray_scattering/n_gaussian_raw.cpp g++ -o cctbx/eltbx/xray_scattering/n_gaussian.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/cctbx/eltbx/xray_scattering/n_gaussian.cpp g++ -o cctbx/eltbx/fp_fdp.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/cctbx/eltbx/fp_fdp.cpp g++ -o cctbx/eltbx/henke.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include cctbx/eltbx/henke.cpp g++ -o cctbx/eltbx/henke_tables_01_12.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include cctbx/eltbx/henke_tables_01_12.cpp g++ -o cctbx/eltbx/henke_tables_13_24.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include cctbx/eltbx/henke_tables_13_24.cpp g++ -o cctbx/eltbx/henke_tables_25_36.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include cctbx/eltbx/henke_tables_25_36.cpp g++ -o cctbx/eltbx/henke_tables_37_48.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security 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-fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/cctbx/uctbx/uctbx.cpp g++ -o cctbx/uctbx/spoil_optimization.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/cctbx/uctbx/spoil_optimization.cpp g++ -o cctbx/uctbx/crystal_orientation.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/cctbx/uctbx/crystal_orientation.cpp g++ -o omptbx/stubs.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<> /<>/omptbx/stubs.cpp g++ -o lib/libomptbx.so.0.0.1 -shared -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libomptbx.so.0 omptbx/stubs.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system Create symlinks for: 'lib/libomptbx.so.0.0.1' 'lib/libomptbx.so.0'->'lib/libomptbx.so.0.0.1' 'lib/libomptbx.so'->'lib/libomptbx.so.0.0.1' g++ -o boost_adaptbx/graph/breadth_first_search_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /<>/boost_adaptbx/graph/breadth_first_search_ext.cpp g++ -o boost_adaptbx/graph/clustering_algorithm_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /<>/boost_adaptbx/graph/clustering_algorithm_ext.cpp g++ -o lib/libcctbx.so.0.0.1 -shared -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libcctbx.so.0 cctbx/eltbx/basic.o cctbx/eltbx/xray_scattering/it1992.o cctbx/eltbx/xray_scattering/wk1995.o cctbx/eltbx/xray_scattering/n_gaussian_raw.o cctbx/eltbx/xray_scattering/n_gaussian.o cctbx/eltbx/fp_fdp.o cctbx/eltbx/henke.o cctbx/eltbx/henke_tables_01_12.o cctbx/eltbx/henke_tables_13_24.o cctbx/eltbx/henke_tables_25_36.o cctbx/eltbx/henke_tables_37_48.o cctbx/eltbx/henke_tables_49_60.o cctbx/eltbx/henke_tables_61_72.o cctbx/eltbx/henke_tables_73_84.o cctbx/eltbx/henke_tables_85_92.o cctbx/eltbx/icsd_radii.o cctbx/eltbx/covalent_radii.o cctbx/eltbx/neutron.o cctbx/eltbx/sasaki.o cctbx/eltbx/sasaki_tables_01_12.o cctbx/eltbx/sasaki_tables_13_24.o cctbx/eltbx/sasaki_tables_25_36.o cctbx/eltbx/sasaki_tables_37_48.o cctbx/eltbx/sasaki_tables_49_60.o cctbx/eltbx/sasaki_tables_61_72.o cctbx/eltbx/sasaki_tables_73_82.o cctbx/eltbx/tiny_pse.o cctbx/eltbx/wavelengths.o cctbx/eltbx/electron_scattering/peng1996.o cctbx/eltbx/attenuation_coefficient.o cctbx/miller/asu.o cctbx/miller/bins.o cctbx/miller/index_generator.o cctbx/miller/index_span.o cctbx/miller/match_bijvoet_mates.o cctbx/miller/match_indices.o cctbx/miller/match_multi_indices.o cctbx/miller/sym_equiv.o cctbx/sgtbx/bricks.o cctbx/sgtbx/change_of_basis_op.o cctbx/sgtbx/find_affine.o cctbx/sgtbx/group_codes.o cctbx/sgtbx/hall_in.o cctbx/sgtbx/lattice_tr.o cctbx/sgtbx/lattice_symmetry.o cctbx/sgtbx/miller.o cctbx/sgtbx/reciprocal_space_asu.o cctbx/sgtbx/reciprocal_space_ref_asu.o cctbx/sgtbx/rot_mx.o cctbx/sgtbx/rot_mx_info.o cctbx/sgtbx/row_echelon_solve.o cctbx/sgtbx/rt_mx.o cctbx/sgtbx/select_generators.o cctbx/sgtbx/seminvariant.o cctbx/sgtbx/site_symmetry.o cctbx/sgtbx/space_group.o cctbx/sgtbx/space_group_type.o cctbx/sgtbx/symbols.o cctbx/sgtbx/tensor_rank_2.o cctbx/sgtbx/tr_group.o cctbx/sgtbx/tr_vec.o cctbx/sgtbx/utils.o cctbx/sgtbx/wyckoff.o cctbx/sgtbx/reference_settings/hall_symbol_table.o cctbx/sgtbx/reference_settings/matrix_group_code_table.o cctbx/sgtbx/reference_settings/normalizer.o cctbx/sgtbx/reference_settings/wyckoff.o cctbx/uctbx/uctbx.o cctbx/uctbx/spoil_optimization.o cctbx/uctbx/crystal_orientation.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lm g++ -o boost_adaptbx/graph/connected_component_algorithm_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /<>/boost_adaptbx/graph/connected_component_algorithm_ext.cpp In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /<>/boost_adaptbx/graph/graph_type.hpp:4, from /<>/boost_adaptbx/graph/breadth_first_search_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ Create symlinks for: 'lib/libcctbx.so.0.0.1' 'lib/libcctbx.so.0'->'lib/libcctbx.so.0.0.1' 'lib/libcctbx.so'->'lib/libcctbx.so.0.0.1' g++ -o lib/libcctbx_sgtbx_asu.so.0.0.1 -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread -shared -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -Wl,-soname=libcctbx_sgtbx_asu.so.0 cctbx/sgtbx/direct_space_asu/proto/cut.o cctbx/sgtbx/direct_space_asu/proto/reference_table.o cctbx/sgtbx/direct_space_asu/proto/direct_space_asu.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lm In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /<>/boost_adaptbx/graph/graph_type.hpp:4, from /<>/boost_adaptbx/graph/clustering_algorithm_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /<>/boost_adaptbx/graph/graph_type.hpp:4, from /<>/boost_adaptbx/graph/connected_component_algorithm_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ g++ -o boost_adaptbx/graph/graph_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /<>/boost_adaptbx/graph/graph_ext.cpp Create symlinks for: 'lib/libcctbx_sgtbx_asu.so.0.0.1' 'lib/libcctbx_sgtbx_asu.so.0'->'lib/libcctbx_sgtbx_asu.so.0.0.1' 'lib/libcctbx_sgtbx_asu.so'->'lib/libcctbx_sgtbx_asu.so.0.0.1' g++ -o lib/libasymmetric_map.so.0.0.1 -shared -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libasymmetric_map.so.0 cctbx/maptbx/asymmetric_map.o cctbx/maptbx/skeletons.o cctbx/maptbx/dijkstra.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -liotbx_xplor -lcctbx_sgtbx_asu -lcctbx -lomptbx -lm In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /<>/boost_adaptbx/graph/graph_type.hpp:4, from /<>/boost_adaptbx/graph/graph_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ g++ -o boost_adaptbx/graph/graph_structure_comparison_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /<>/boost_adaptbx/graph/graph_structure_comparison_ext.cpp g++ -o boost_adaptbx/graph/maximum_clique_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /<>/boost_adaptbx/graph/maximum_clique_ext.cpp Create symlinks for: 'lib/libasymmetric_map.so.0.0.1' 'lib/libasymmetric_map.so.0'->'lib/libasymmetric_map.so.0.0.1' 'lib/libasymmetric_map.so'->'lib/libasymmetric_map.so.0.0.1' g++ -o bin/cctbx_blobs -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/maptbx/blobs_cmd.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lasymmetric_map -liotbx_xplor -lcctbx_sgtbx_asu -lcctbx -lomptbx -lm g++ -o boost_adaptbx/graph/metric_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /<>/boost_adaptbx/graph/metric_ext.cpp In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /<>/boost_adaptbx/graph/graph_type.hpp:4, from /<>/boost_adaptbx/graph/graph_structure_comparison_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /<>/boost_adaptbx/graph/graph_type.hpp:4, from /<>/boost_adaptbx/graph/maximum_clique_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /<>/boost_adaptbx/graph/graph_type.hpp:4, from /<>/boost_adaptbx/graph/metric_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ g++ -o boost_adaptbx/graph/min_cut_max_flow_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /<>/boost_adaptbx/graph/min_cut_max_flow_ext.cpp In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /<>/boost_adaptbx/graph/graph_type.hpp:4, from /<>/boost_adaptbx/graph/min_cut_max_flow_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ g++ -o boost_adaptbx/graph/utility_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /<>/boost_adaptbx/graph/utility_ext.cpp In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /<>/boost_adaptbx/graph/graph_type.hpp:4, from /<>/boost_adaptbx/graph/utility_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ g++ -o boost_adaptbx/hybrid_times_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /<>/boost_adaptbx/hybrid_times_ext.cpp g++ -o boost_adaptbx/meta_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /<>/boost_adaptbx/meta_ext.cpp g++ -o boost_adaptbx/optional_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /<>/boost_adaptbx/optional_ext.cpp g++ -o boost_adaptbx/rational_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /<>/boost_adaptbx/rational_ext.cpp g++ -o boost_adaptbx/std_pair_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /<>/boost_adaptbx/std_pair_ext.cpp g++ -o boost_adaptbx/tests/boost_thread_test.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/<> /<>/boost_adaptbx/tests/boost_thread_test.cpp g++ -o boost_adaptbx/tests/python_streambuf_test_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /<>/boost_adaptbx/tests/python_streambuf_test_ext.cpp g++ -o boost_adaptbx/tests/tst_optional_copy.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<> /<>/boost_adaptbx/tests/tst_optional_copy.cpp g++ -o boost_adaptbx/tests/tst_optional_copy -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread boost_adaptbx/tests/tst_optional_copy.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /<>/boost_adaptbx/tests/python_streambuf_test_ext.cpp:2: /usr/include/boost/timer.hpp:25:1: note: ‘#pragma message: This header is deprecated. Use the facilities in instead.’ 25 | BOOST_HEADER_DEPRECATED( "the facilities in " ) | ^~~~~~~~~~~~~~~~~~~~~~~ g++ -o boost_adaptbx/tuple_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /<>/boost_adaptbx/tuple_ext.cpp g++ -o cbflib_adaptbx/detectors/boost_python/cbflib_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -DSWIG_PYTHON_STRICT_BYTE_CHAR -I/<> -I/usr/include/hdf5/serial -I/<>/.pybuild/cpython3_3.12/base/include -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/cbflib -I/<>/cbflib_adaptbx -I/usr/include/python3.12 /<>/cbflib_adaptbx/detectors/boost_python/cbflib_ext.cpp g++ -o cbflib_adaptbx/detectors/buffer_based_service.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/usr/include/hdf5/serial -I/<>/.pybuild/cpython3_3.12/base/include -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/<> -I/usr/include -I/usr/include/cbflib -I/<>/cbflib_adaptbx /<>/cbflib_adaptbx/detectors/buffer_based_service.cpp g++ -o cbflib_adaptbx/detectors/cbf_adaptor.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/usr/include/hdf5/serial -I/<>/.pybuild/cpython3_3.12/base/include -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/<> -I/usr/include -I/usr/include/cbflib -I/<>/cbflib_adaptbx /<>/cbflib_adaptbx/detectors/cbf_adaptor.cpp g++ -o cbflib_adaptbx/detectors/cbf_byte_offset_optimized.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/usr/include/hdf5/serial -I/<>/.pybuild/cpython3_3.12/base/include -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/<> -I/usr/include -I/usr/include/cbflib -I/<>/cbflib_adaptbx /<>/cbflib_adaptbx/detectors/cbf_byte_offset_optimized.cpp g++ -o cbflib_adaptbx/detectors/mar_adaptor.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/usr/include/hdf5/serial -I/<>/.pybuild/cpython3_3.12/base/include -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/<> -I/usr/include -I/usr/include/cbflib -I/<>/cbflib_adaptbx /<>/cbflib_adaptbx/detectors/mar_adaptor.cpp g++ -o cbflib_adaptbx/detectors/tst_memory.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -DCBF_NO_REGEX -I/<>/.pybuild/cpython3_3.12/base/include -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/cbflib -I/<>/cbflib_adaptbx -I/usr/include/hdf5/serial /<>/cbflib_adaptbx/detectors/tst_memory.cpp g++ -o ccp4io_adaptbx/ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/ccp4io -I/usr/include -I/usr/include/python3.12 /<>/ccp4io_adaptbx/ext.cpp gcc -o ccp4io_adaptbx/fortran_call_stubs.o -c -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -I/<> -I/usr/include -I/usr/include/ccp4 -I/<>/ccp4io -I. -I/<> /<>/ccp4io_adaptbx/fortran_call_stubs.c gcc -o ccp4io_adaptbx/printf_wrappers.o -c -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -I/<> -I/usr/include -I/usr/include/ccp4 -I/<>/ccp4io -I. -I/<> /<>/ccp4io_adaptbx/printf_wrappers.c g++ -o cctbx/adp_restraints/adp_restraints_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/adp_restraints/adp_restraints_bpl.cpp g++ -o cctbx/adp_restraints/adp_restraints_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/adp_restraints/adp_restraints_ext.cpp g++ -o cctbx/adp_restraints/adp_similarity_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat 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-fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/adp_restraints/aniso_restraints_bpl.cpp g++ -o cctbx/adp_restraints/fixed_u_eq_adp_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 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-I/usr/include/python3.12 /<>/cctbx/adptbx/boost_python/hirshfeld.cpp g++ -o cctbx/array_family/boost_python/flex_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/array_family/boost_python/flex_ext.cpp g++ -o 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-ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/eltbx/boost_python/henke_ext.cpp g++ -o cctbx/eltbx/boost_python/icsd_radii_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/eltbx/boost_python/icsd_radii_ext.cpp g++ -o cctbx/eltbx/boost_python/neutron_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/eltbx/boost_python/neutron_ext.cpp g++ -o cctbx/eltbx/boost_python/sasaki_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/eltbx/boost_python/sasaki_ext.cpp g++ -o cctbx/eltbx/boost_python/tiny_pse_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/eltbx/boost_python/tiny_pse_ext.cpp g++ -o cctbx/eltbx/boost_python/wavelengths_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/eltbx/boost_python/wavelengths_ext.cpp g++ -o cctbx/eltbx/boost_python/xray_scattering_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/eltbx/boost_python/xray_scattering_ext.cpp g++ -o cctbx/examples/convert_ccp4_symop_lib.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -Icctbx/examples -I/<>/cctbx/examples /<>/cctbx/examples/convert_ccp4_symop_lib.cpp g++ -o cctbx/examples/find_distances.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -Icctbx/examples -I/<>/cctbx/examples /<>/cctbx/examples/find_distances.cpp g++ -o cctbx/examples/getting_started.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -Icctbx/examples -I/<>/cctbx/examples /<>/cctbx/examples/getting_started.cpp g++ -o cctbx/examples/lattice_symmetry.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -Icctbx/examples -I/<>/cctbx/examples /<>/cctbx/examples/lattice_symmetry.cpp g++ -o cctbx/examples/sym_equiv_sites.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -Icctbx/examples -I/<>/cctbx/examples /<>/cctbx/examples/sym_equiv_sites.cpp g++ -o cctbx/examples/sys_abs_equiv_space_groups.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -Icctbx/examples -I/<>/cctbx/examples /<>/cctbx/examples/sys_abs_equiv_space_groups.cpp g++ -o cctbx/geometry/boost_python/geometry_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/geometry/boost_python/geometry_ext.cpp g++ -o cctbx/geometry_restraints/angle_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/geometry_restraints/angle_bpl.cpp g++ -o cctbx/geometry_restraints/bond_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/geometry_restraints/bond_bpl.cpp g++ -o cctbx/geometry_restraints/bond_similarity_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/geometry_restraints/bond_similarity_bpl.cpp In file included from /<>/cctbx/xray/scatterer.h:5, from /<>/cctbx/restraints.h:6, from /<>/cctbx/geometry_restraints/angle.h:6, from /<>/cctbx/geometry_restraints/angle_bpl.cpp:13: /<>/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /<>/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i>/cctbx/sgtbx/site_symmetry.h:6: /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:203:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:214:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] In file included from /usr/include/c++/13/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /<>/scitbx/array_family/ref_reductions.h:8, from /<>/scitbx/array_family/tiny.h:5, from /<>/scitbx/array_family/shared_plain.h:31, from /<>/scitbx/array_family/shared.h:4, from /<>/scitbx/array_family/boost_python/shared_wrapper.h:12, from /<>/cctbx/geometry_restraints/angle_bpl.cpp:11: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::angle_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ /<>/cctbx/geometry_restraints/angle_bpl.cpp:75:65: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /<>/cctbx/sgtbx/wyckoff.h:4, from /<>/cctbx/sgtbx/sym_equiv_sites.h:5, from /<>/cctbx/crystal/direct_space_asu.h:4, from /<>/cctbx/geometry_restraints/asu_cache.h:4, from /<>/cctbx/geometry_restraints/bond.h:5, from /<>/cctbx/geometry_restraints/bond_misc.h:4, from /<>/cctbx/geometry_restraints/bond_bpl.cpp:14: /<>/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /<>/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i>/cctbx/xray/scatterer.h:5, from /<>/cctbx/restraints.h:6, from /<>/cctbx/geometry_restraints/bond_similarity.h:6, from /<>/cctbx/geometry_restraints/bond_similarity_bpl.cpp:12: /<>/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /<>/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i>/cctbx/geometry_restraints/bond_similarity.h: In constructor ‘cctbx::geometry_restraints::bond_similarity::bond_similarity(const scitbx::af::const_ref, scitbx::af::trivial_accessor>&, const cctbx::geometry_restraints::bond_similarity_proxy&)’: /<>/cctbx/geometry_restraints/bond_similarity.h:84:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 84 | for(int i=0;i>/cctbx/geometry_restraints/bond_similarity.h: In constructor ‘cctbx::geometry_restraints::bond_similarity::bond_similarity(const cctbx::uctbx::unit_cell&, const scitbx::af::const_ref, scitbx::af::trivial_accessor>&, const cctbx::geometry_restraints::bond_similarity_proxy&)’: /<>/cctbx/geometry_restraints/bond_similarity.h:108:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 108 | for(int i=0;i>/cctbx/sgtbx/site_symmetry.h:6: /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:203:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:214:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] In file included from /<>/cctbx/sgtbx/site_symmetry.h:6: /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:203:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:214:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] In file included from /usr/include/c++/13/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /<>/scitbx/array_family/ref_reductions.h:8, from /<>/scitbx/array_family/tiny.h:5, from /<>/scitbx/array_family/shared_plain.h:31, from /<>/scitbx/array_family/shared.h:4, from /<>/scitbx/array_family/boost_python/shared_wrapper.h:12, from /<>/cctbx/geometry_restraints/bond_bpl.cpp:10: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = std::map; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ /<>/cctbx/geometry_restraints/bond_bpl.cpp:129:23: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::bond_simple_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ /<>/cctbx/geometry_restraints/bond_bpl.cpp:232:25: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::bond_asu_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ /<>/cctbx/geometry_restraints/bond_bpl.cpp:340:25: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] In file included from /usr/include/c++/13/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /<>/scitbx/array_family/ref_reductions.h:8, from /<>/scitbx/array_family/tiny.h:5, from /<>/scitbx/array_family/shared_plain.h:31, from /<>/scitbx/array_family/shared.h:4, from /<>/scitbx/array_family/boost_python/shared_wrapper.h:12, from /<>/cctbx/geometry_restraints/bond_similarity_bpl.cpp:9: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::bond_similarity_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ /<>/cctbx/geometry_restraints/bond_similarity_bpl.cpp:55:44: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared, 2> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared, 2> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = scitbx::af::tiny, 2>; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ /<>/cctbx/geometry_restraints/bond_similarity_bpl.cpp:79:54: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/array_family/shared_plain.h: In member function ‘scitbx::af::shared_plain >::shared_plain(unsigned long const&)’: /<>/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/memory:69, from /usr/include/boost/config/no_tr1/memory.hpp:21, from /usr/include/boost/get_pointer.hpp:14, from /usr/include/boost/python/object/pointer_holder.hpp:11, from /usr/include/boost/python/to_python_indirect.hpp:10, from /usr/include/boost/python/converter/arg_to_python.hpp:10, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /usr/include/boost/python/tuple.hpp:10, from /<>/cctbx/geometry_restraints/shared_wrapper_pickle.hpp:6, from /<>/cctbx/geometry_restraints/angle_bpl.cpp:2: /usr/include/c++/13/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const struct vec3 &’ to ‘std::uninitialized_fill_n*, unsigned long, scitbx::vec3 >(scitbx::vec3*, unsigned long, scitbx::vec3 const&)scitbx::vec3* [clone .isra.0]’ declared here 312 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ g++ -o cctbx/geometry_restraints/bond_sorted_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/geometry_restraints/bond_sorted_bpl.cpp In file included from /<>/cctbx/sgtbx/wyckoff.h:4, from /<>/cctbx/sgtbx/sym_equiv_sites.h:5, from /<>/cctbx/crystal/direct_space_asu.h:4, from /<>/cctbx/geometry_restraints/asu_cache.h:4, from /<>/cctbx/geometry_restraints/bond.h:5, from /<>/cctbx/geometry_restraints/bond_sorted.h:4, from /<>/cctbx/geometry_restraints/bond_sorted_bpl.cpp:9: /<>/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /<>/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i>/cctbx/sgtbx/site_symmetry.h:6: /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:203:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:214:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] /<>/cctbx/crystal/direct_space_asu.h: In instantiation of ‘int cctbx::crystal::direct_space_asu::asu_mappings::find_i_sym(unsigned int, const cctbx::sgtbx::rt_mx&) const [with FloatType = double; IntShiftType = int]’: /<>/cctbx/crystal/pair_tables.h:643:46: required from ‘bool cctbx::crystal::pair_asu_table::process_pair(unsigned int, unsigned int, const cctbx::sgtbx::rt_mx&) [with FloatType = double; IntShiftType = int]’ /<>/cctbx/crystal/pair_tables.h:543:35: required from ‘cctbx::crystal::pair_asu_table& cctbx::crystal::pair_asu_table::add_pair(const scitbx::af::tiny&) [with FloatType = double; IntShiftType = int]’ /<>/cctbx/geometry_restraints/bond_sorted.h:16:30: required from here /<>/cctbx/crystal/direct_space_asu.h:859:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, std::allocator > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 859 | for(int i_sym=0; i_sym>/cctbx/crystal/direct_space_asu.h:869:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, std::allocator > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 869 | for(int i_sym=0; i_sym>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/geometry_restraints/chirality_bpl.cpp In file included from /<>/cctbx/xray/scatterer.h:5, from /<>/cctbx/restraints.h:6, from /<>/cctbx/geometry_restraints/chirality.h:5, from /<>/cctbx/geometry_restraints/chirality_bpl.cpp:13: /<>/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /<>/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/geometry_restraints/dihedral_bpl.cpp In file included from /<>/cctbx/sgtbx/site_symmetry.h:6: /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:203:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:214:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] In file included from /usr/include/c++/13/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /<>/scitbx/array_family/ref_reductions.h:8, from /<>/scitbx/array_family/tiny.h:5, from /<>/scitbx/array_family/shared_plain.h:31, from /<>/scitbx/array_family/shared.h:4, from /<>/scitbx/array_family/boost_python/shared_wrapper.h:12, from /<>/cctbx/geometry_restraints/chirality_bpl.cpp:11: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::chirality_proxy; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ /<>/cctbx/geometry_restraints/chirality_bpl.cpp:75:60: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /<>/cctbx/xray/scatterer.h:5, from /<>/cctbx/restraints.h:6, from /<>/cctbx/geometry_restraints/dihedral.h:6, from /<>/cctbx/geometry_restraints/dihedral_bpl.cpp:12: /<>/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /<>/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i>/cctbx/geometry_restraints/dihedral_bpl.cpp:13: /<>/cctbx/geometry_restraints/proxy_select.h: In instantiation of ‘scitbx::af::shared cctbx::geometry_restraints::shared_proxy_remove(const scitbx::af::const_ref&, const scitbx::af::const_ref&) [with ProxyType = dihedral_proxy]’: /<>/cctbx/geometry_restraints/dihedral_bpl.cpp:110:17: required from here /<>/cctbx/geometry_restraints/proxy_select.h:187:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 187 | if (match_ctr != i_seqs.size()) { | ~~~~~~~~~~^~~~~~~~~~~~~~~~ In file included from /<>/cctbx/sgtbx/site_symmetry.h:6: /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:203:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:214:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] g++ -o cctbx/geometry_restraints/geometry_restraints_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/geometry_restraints/geometry_restraints_ext.cpp In file included from /usr/include/c++/13/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /<>/scitbx/array_family/ref_reductions.h:8, from /<>/scitbx/array_family/tiny.h:5, from /<>/scitbx/array_family/shared_plain.h:31, from /<>/scitbx/array_family/shared.h:4, from /<>/scitbx/array_family/boost_python/shared_wrapper.h:12, from /<>/cctbx/geometry_restraints/dihedral_bpl.cpp:11: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::dihedral_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ /<>/cctbx/geometry_restraints/dihedral_bpl.cpp:84:65: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o cctbx/geometry_restraints/motif_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/geometry_restraints/motif_bpl.cpp g++ -o cctbx/geometry_restraints/nonbonded_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/geometry_restraints/nonbonded_bpl.cpp In file included from /<>/cctbx/sgtbx/wyckoff.h:4, from /<>/cctbx/sgtbx/sym_equiv_sites.h:5, from /<>/cctbx/crystal/direct_space_asu.h:4, from /<>/cctbx/geometry_restraints/asu_cache.h:4, from /<>/cctbx/geometry_restraints/nonbonded.h:4, from /<>/cctbx/geometry_restraints/nonbonded_bpl.cpp:11: /<>/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /<>/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i>/cctbx/sgtbx/site_symmetry.h:6: /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:203:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:214:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] In file included from /usr/include/c++/13/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /<>/scitbx/array_family/ref_reductions.h:8, from /<>/scitbx/array_family/tiny.h:5, from /<>/scitbx/array_family/shared_plain.h:31, from /<>/scitbx/array_family/shared.h:4, from /<>/scitbx/array_family/boost_python/shared_wrapper.h:12, from /<>/cctbx/geometry_restraints/nonbonded_bpl.cpp:10: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::nonbonded_simple_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ /<>/cctbx/geometry_restraints/nonbonded_bpl.cpp:92:25: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::nonbonded_asu_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ /<>/cctbx/geometry_restraints/nonbonded_bpl.cpp:125:25: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] g++ -o cctbx/geometry_restraints/nonbonded_sorted_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/geometry_restraints/nonbonded_sorted_bpl.cpp g++ -o cctbx/geometry_restraints/parallelity_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/geometry_restraints/parallelity_bpl.cpp In file included from /<>/cctbx/sgtbx/wyckoff.h:4, from /<>/cctbx/sgtbx/sym_equiv_sites.h:5, from /<>/cctbx/crystal/direct_space_asu.h:4, from /<>/cctbx/geometry_restraints/asu_cache.h:4, from /<>/cctbx/geometry_restraints/nonbonded.h:4, from /<>/cctbx/geometry_restraints/nonbonded_sorted.h:4, from /<>/cctbx/geometry_restraints/nonbonded_sorted_bpl.cpp:8: /<>/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /<>/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i>/cctbx/sgtbx/site_symmetry.h:6: /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:203:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:214:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] In file included from /<>/cctbx/crystal/neighbors_fast.h:5, from /<>/cctbx/crystal/pair_tables.h:4, from /<>/cctbx/geometry_restraints/nonbonded_sorted.h:5: /<>/scitbx/cubicles.h: In instantiation of ‘scitbx::vec3 scitbx::cubicles::i_cubicle(const SiteType&) const [with SiteType = cctbx::cartesian; CubicleContentType = std::vector; FloatType = double]’: /<>/cctbx/crystal/neighbors_fast.h:77:34: required from ‘cctbx::crystal::neighbors::fast_pair_generator::fast_pair_generator(const boost::shared_ptr >&, const FloatType&, bool, const FloatType&, const FloatType&) [with FloatType = double; IntShiftType = int]’ /<>/cctbx/geometry_restraints/nonbonded_sorted.h:80:27: required from here /<>/scitbx/cubicles.h:176:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 176 | else if (j >= ref.accessor()[i]) j = ref.accessor()[i]-1; | ~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /<>/scitbx/array_family/ref_reductions.h:8, from /<>/scitbx/array_family/tiny.h:5, from /<>/scitbx/array_family/shared_plain.h:31, from /<>/scitbx/array_family/shared.h:4, from /<>/scitbx/array_family/boost_python/shared_wrapper.h:12, from /<>/cctbx/geometry_restraints/parallelity_bpl.cpp:11: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::parallelity_proxy; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ /<>/cctbx/geometry_restraints/parallelity_bpl.cpp:82:60: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o cctbx/geometry_restraints/planarity_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/geometry_restraints/planarity_bpl.cpp g++ -o cctbx/maptbx/asymmetric_map_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/cctbx/maptbx/asymmetric_map_ext.cpp In file included from /usr/include/c++/13/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /<>/scitbx/array_family/ref_reductions.h:8, from /<>/scitbx/array_family/tiny.h:5, from /<>/scitbx/array_family/shared_plain.h:31, from /<>/scitbx/array_family/shared.h:4, from /<>/scitbx/array_family/boost_python/shared_wrapper.h:12, from /<>/cctbx/geometry_restraints/planarity_bpl.cpp:11: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::planarity_proxy; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ /<>/cctbx/geometry_restraints/planarity_bpl.cpp:62:23: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o cctbx/maptbx/bcr/bcr_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/cctbx/maptbx/bcr/bcr_ext.cpp g++ -o cctbx/maptbx/boost_python/coordinate_transformers.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/maptbx/boost_python/coordinate_transformers.cpp g++ -o cctbx/maptbx/boost_python/grid_indices_around_sites.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/maptbx/boost_python/grid_indices_around_sites.cpp g++ -o cctbx/maptbx/boost_python/grid_tags.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/maptbx/boost_python/grid_tags.cpp g++ -o cctbx/maptbx/boost_python/gridding.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/maptbx/boost_python/gridding.cpp g++ -o cctbx/maptbx/boost_python/maptbx_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/maptbx/boost_python/maptbx_ext.cpp g++ -o cctbx/maptbx/boost_python/misc.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/maptbx/boost_python/misc.cpp g++ -o cctbx/maptbx/boost_python/peak_search.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/maptbx/boost_python/peak_search.cpp g++ -o cctbx/maptbx/boost_python/pymol_interface.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/maptbx/boost_python/pymol_interface.cpp g++ -o cctbx/maptbx/boost_python/statistics.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/maptbx/boost_python/statistics.cpp g++ -o cctbx/maptbx/boost_python/structure_factors.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/maptbx/boost_python/structure_factors.cpp g++ -o cctbx/masks/boost_python/masks_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/masks/boost_python/masks_ext.cpp g++ -o cctbx/math/boost_python/math_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/math/boost_python/math_ext.cpp g++ -o cctbx/math/time_trigonometry.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/cctbx/math/time_trigonometry.cpp In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9, from /usr/include/boost/smart_ptr/shared_array.hpp:17, from /usr/include/boost/shared_array.hpp:17, from /<>/cctbx/math/cos_sin_table.h:6, from /<>/cctbx/math/time_trigonometry.cpp:1: /usr/include/boost/timer.hpp:25:1: note: ‘#pragma message: This header is deprecated. Use the facilities in instead.’ 25 | BOOST_HEADER_DEPRECATED( "the facilities in " ) | ^~~~~~~~~~~~~~~~~~~~~~~ g++ -o cctbx/merging/ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/merging/ext.cpp g++ -o cctbx/math/time_trigonometry -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/math/time_trigonometry.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lboost_thread -lboost_system -lm g++ -o cctbx/miller/boost_python/amplitude_normalisation.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/miller/boost_python/amplitude_normalisation.cpp g++ -o cctbx/miller/boost_python/asu.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/miller/boost_python/asu.cpp g++ -o cctbx/miller/boost_python/bins.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/miller/boost_python/bins.cpp g++ -o cctbx/miller/boost_python/change_basis.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/miller/boost_python/change_basis.cpp g++ -o cctbx/miller/boost_python/expand_to_p1.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/miller/boost_python/expand_to_p1.cpp g++ -o cctbx/miller/boost_python/f_calc_map.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/miller/boost_python/f_calc_map.cpp g++ -o cctbx/miller/boost_python/index_generator.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/miller/boost_python/index_generator.cpp g++ -o cctbx/miller/boost_python/index_span.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/miller/boost_python/index_span.cpp g++ -o cctbx/miller/boost_python/lookup_utils.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/miller/boost_python/lookup_utils.cpp g++ -o cctbx/miller/boost_python/match_bijvoet_mates.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread 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/<>/cctbx/sgtbx/direct_space_asu/proto/tst_asu.cpp g++ -o cctbx/sgtbx/direct_space_asu/proto/tst_asu -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/sgtbx/direct_space_asu/proto/tst_asu.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx_sgtbx_asu -lcctbx -lm g++ -o cctbx/symmetry_search/boost_python/symmetry_search_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/symmetry_search/boost_python/symmetry_search_ext.cpp g++ -o cctbx/translation_search/boost_python/fast_nv1995.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/translation_search/boost_python/fast_nv1995.cpp g++ -o cctbx/translation_search/boost_python/fast_terms.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/translation_search/boost_python/fast_terms.cpp g++ -o cctbx/translation_search/boost_python/symmetry_flags.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/translation_search/boost_python/symmetry_flags.cpp g++ -o cctbx/translation_search/boost_python/translation_search_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/translation_search/boost_python/translation_search_ext.cpp g++ -o cctbx/uctbx/boost_python/fast_minimum_reduction.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/uctbx/boost_python/fast_minimum_reduction.cpp g++ -o cctbx/uctbx/boost_python/uctbx_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/uctbx/boost_python/uctbx_ext.cpp g++ -o cctbx/uctbx/determine_unit_cell/ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -DHAVE_SINGLEFILE_NCDIST -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/uctbx/determine_unit_cell/ext.cpp g++ -o cctbx/xray/boost_python/conversions.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/fable /<>/cctbx/xray/boost_python/conversions.cpp g++ -o cctbx/xray/boost_python/curvatures_simple.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/fable /<>/cctbx/xray/boost_python/curvatures_simple.cpp g++ -o cctbx/xray/boost_python/each_hkl_gradients_direct.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/fable /<>/cctbx/xray/boost_python/each_hkl_gradients_direct.cpp In file included from /<>/cctbx/xray/scatterer.h:5, from /<>/cctbx/xray/scattering_type_registry.h:4, from /<>/cctbx/xray/curvatures_simple.h:4, from /<>/cctbx/xray/boost_python/curvatures_simple.cpp:3: /<>/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /<>/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i>/cctbx/xray/scatterer.h:5, from /<>/cctbx/xray/scattering_type_registry.h:4, from /<>/cctbx/xray/gradients_direct.h:4, from /<>/cctbx/xray/each_hkl_gradients_direct.h:4, from /<>/cctbx/xray/boost_python/each_hkl_gradients_direct.cpp:3: /<>/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /<>/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i>/cctbx/sgtbx/site_symmetry.h:6: /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:203:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:214:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] In file included from /<>/scitbx/array_family/small.h:4, from /<>/cctbx/uctbx.h:11, from /<>/cctbx/sgtbx/change_of_basis_op.h:6, from /<>/cctbx/sgtbx/tr_group.h:4, from /<>/cctbx/sgtbx/space_group.h:4, from /<>/cctbx/sgtbx/site_constraints.h:4, from /<>/cctbx/sgtbx/site_symmetry.h:4: /<>/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /<>/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ /<>/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ /<>/cctbx/xray/scattering_type_registry.h:192:40: required from here /<>/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ g++ -o cctbx/xray/boost_python/extinction.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/fable /<>/cctbx/xray/boost_python/extinction.cpp In file included from /<>/cctbx/sgtbx/site_symmetry.h:6: /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:203:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:214:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] In file included from /<>/scitbx/array_family/small.h:4, from /<>/cctbx/uctbx.h:11, from /<>/cctbx/sgtbx/change_of_basis_op.h:6, from /<>/cctbx/sgtbx/tr_group.h:4, from /<>/cctbx/sgtbx/space_group.h:4, from /<>/cctbx/sgtbx/site_constraints.h:4, from /<>/cctbx/sgtbx/site_symmetry.h:4: /<>/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /<>/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ /<>/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ /<>/cctbx/xray/scattering_type_registry.h:192:40: required from here /<>/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ g++ -o cctbx/xray/boost_python/f_model_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/fable /<>/cctbx/xray/boost_python/f_model_bpl.cpp g++ -o cctbx/xray/boost_python/fast_gradients.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/fable /<>/cctbx/xray/boost_python/fast_gradients.cpp g++ -o cctbx/xray/boost_python/gradient_flags.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/fable /<>/cctbx/xray/boost_python/gradient_flags.cpp g++ -o cctbx/xray/boost_python/gradients_direct.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/fable /<>/cctbx/xray/boost_python/gradients_direct.cpp In file included from /<>/cctbx/xray/scatterer.h:5, from /<>/cctbx/xray/scattering_type_registry.h:4, from /<>/cctbx/xray/sampling_base.h:4, from /<>/cctbx/xray/fast_gradients.h:4, from /<>/cctbx/xray/boost_python/fast_gradients.cpp:3: /<>/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /<>/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i>/cctbx/miller/match_indices.h:4, from /<>/cctbx/miller/lookup_utils.h:11, from /<>/cctbx/xray/f_model.h:11, from /<>/cctbx/xray/boost_python/f_model_bpl.cpp:3: /<>/cctbx/miller/match.h:16:34: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 16 | struct additive_sigma : std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/istream:40, from /usr/include/c++/13/sstream:40, from /<>/scitbx/error_utils.h:4, from /<>/scitbx/error.h:16, from /<>/scitbx/array_family/ref.h:4, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/array_family/shared_plain.h:31, from /<>/scitbx/array_family/shared.h:4, from /<>/cctbx/xray/f_model.h:4: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /<>/cctbx/miller/match.h:18:20: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 18 | typedef std::binary_function base_type; | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /<>/cctbx/miller/match.h:31:27: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 31 | struct average : std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /<>/cctbx/miller/match.h:33:20: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 33 | typedef std::binary_function base_type; | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /<>/cctbx/sgtbx/site_symmetry.h:6: /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:203:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:214:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] In file included from /<>/scitbx/array_family/small.h:4, from /<>/cctbx/uctbx.h:11, from /<>/cctbx/sgtbx/change_of_basis_op.h:6, from /<>/cctbx/sgtbx/tr_group.h:4, from /<>/cctbx/sgtbx/space_group.h:4, from /<>/cctbx/sgtbx/site_constraints.h:4, from /<>/cctbx/sgtbx/site_symmetry.h:4: /<>/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /<>/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ /<>/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ /<>/cctbx/xray/scattering_type_registry.h:192:40: required from here /<>/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ /<>/cctbx/xray/f_model.h: In instantiation of ‘cctbx::xray::f_model_core_data::f_model_core_data cctbx::xray::f_model_core_data::f_model_core_data::select(const scitbx::af::const_ref&) const [with FloatType = double]’: /<>/cctbx/xray/boost_python/f_model_bpl.cpp:174:32: required from here /<>/cctbx/xray/f_model.h:732:38: warning: comparison of integer expressions of different signedness: ‘const int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 732 | CCTBX_ASSERT( iselection[ii]>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/cctbx/xray/f_model.h:732:10: note: in expansion of macro ‘CCTBX_ASSERT’ 732 | CCTBX_ASSERT( iselection[ii]>/cctbx/xray/scatterer.h:5, from /<>/cctbx/xray/scattering_type_registry.h:4, from /<>/cctbx/xray/gradients_direct.h:4, from /<>/cctbx/xray/boost_python/gradients_direct.cpp:3: /<>/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /<>/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/fable /<>/cctbx/xray/boost_python/grouped_data.cpp In file included from /<>/cctbx/sgtbx/site_symmetry.h:6: /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:203:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:214:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] In file included from /<>/scitbx/array_family/small.h:4, from /<>/cctbx/uctbx.h:11, from /<>/cctbx/sgtbx/change_of_basis_op.h:6, from /<>/cctbx/sgtbx/tr_group.h:4, from /<>/cctbx/sgtbx/space_group.h:4, from /<>/cctbx/sgtbx/site_constraints.h:4, from /<>/cctbx/sgtbx/site_symmetry.h:4: /<>/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /<>/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ /<>/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ /<>/cctbx/xray/scattering_type_registry.h:192:40: required from here /<>/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ g++ -o cctbx/xray/boost_python/minimization.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/fable /<>/cctbx/xray/boost_python/minimization.cpp In file included from /<>/cctbx/miller/match_indices.h:4, from /<>/cctbx/miller/lookup_utils.h:11, from /<>/cctbx/xray/grouped_data.h:14, from /<>/cctbx/xray/boost_python/grouped_data.cpp:3: /<>/cctbx/miller/match.h:16:34: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 16 | struct additive_sigma : std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/istream:40, from /usr/include/c++/13/sstream:40, from /<>/scitbx/error_utils.h:4, from /<>/scitbx/error.h:16, from /<>/scitbx/array_family/ref.h:4, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/array_family/shared_plain.h:31, from /<>/scitbx/array_family/shared.h:4, from /<>/cctbx/xray/grouped_data.h:4: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /<>/cctbx/miller/match.h:18:20: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 18 | typedef std::binary_function base_type; | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /<>/cctbx/miller/match.h:31:27: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 31 | struct average : std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /<>/cctbx/miller/match.h:33:20: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 33 | typedef std::binary_function base_type; | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ g++ -o cctbx/xray/boost_python/parameter_map.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/fable /<>/cctbx/xray/boost_python/parameter_map.cpp /<>/cctbx/xray/grouped_data.h: In instantiation of ‘FloatType cctbx::xray::grouped_data::merger::bic() [with FloatType = double]’: /<>/cctbx/xray/boost_python/grouped_data.cpp:68:29: required from here /<>/cctbx/xray/grouped_data.h:257:30: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 257 | for (long int ii=0;ii>/cctbx/xray/grouped_data.h: In instantiation of ‘FloatType cctbx::xray::grouped_data::merger::r_abs() [with FloatType = double]’: /<>/cctbx/xray/boost_python/grouped_data.cpp:69:31: required from here /<>/cctbx/xray/grouped_data.h:271:30: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 271 | for (long int ii=0;ii>/cctbx/xray/grouped_data.h: In instantiation of ‘std::vector cctbx::xray::grouped_data::merger::combine_obs(long int) [with FloatType = double]’: /<>/cctbx/xray/grouped_data.h:258:24: required from ‘FloatType cctbx::xray::grouped_data::merger::bic() [with FloatType = double]’ /<>/cctbx/xray/boost_python/grouped_data.cpp:68:29: required from here /<>/cctbx/xray/grouped_data.h:213:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 213 | for (int ii=1;ii>/cctbx/xray/grouped_data.h:231:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 231 | for (int ii=1;ii>/cctbx/xray/grouped_data.h: In instantiation of ‘cctbx::xray::grouped_data::unmerged_data::unmerged_data(scitbx::af::const_ref >, scitbx::af::const_ref >, const cctbx::sgtbx::space_group&, const bool&) [with FloatType = double]’: /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2, A3) [with A0 = boost::python::objects::reference_to_value >&>; A1 = boost::python::objects::reference_to_value >&>; A2 = boost::python::objects::reference_to_value; A3 = boost::python::objects::reference_to_value; Value = cctbx::xray::grouped_data::unmerged_data; PyObject = _object]’ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<4>::apply::execute(PyObject*, t0, t1, t2, t3) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::vector4 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>; PyObject = _object; t0 = const scitbx::af::const_ref >&; t1 = const scitbx::af::const_ref >&; t2 = const cctbx::sgtbx::space_group&; t3 = const bool&]’ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::vector4 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>; Arity = boost::mpl::size >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&> >; Holder = boost::python::objects::value_holder >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ /usr/include/boost/python/init.hpp:310:66: required from ‘void boost::python::detail::def_init_aux(ClassT&, const Signature&, NArgs, const CallPoliciesT&, const char*, const keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector4 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>; NArgs = boost::mpl::size >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&> >; keyword_range = std::pair]’ /usr/include/boost/python/init.hpp:377:31: required from ‘static void boost::python::detail::define_class_init_helper<0>::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, const boost::python::detail::keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector4 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>; NArgs = boost::mpl::size >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&> >; boost::python::detail::keyword_range = std::pair]’ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_ >; DerivedT = boost::python::init >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>]’ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&> >; classT = boost::python::class_ >]’ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_ >; DerivedVisitor = boost::python::init >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>]’ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>; W = cctbx::xray::grouped_data::unmerged_data; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_ >]’ /<>/cctbx/xray/boost_python/grouped_data.cpp:27:15: required from here /<>/cctbx/xray/grouped_data.h:54:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 54 | for (int ii=0;ii>/cctbx/xray/grouped_data.h:61:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 61 | for (int ii=0; ii>/cctbx/xray/grouped_data.h:67:35: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 67 | CCTBX_ASSERT( tmp_index < asu_hkl.size() ); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/cctbx/xray/grouped_data.h:67:11: note: in expansion of macro ‘CCTBX_ASSERT’ 67 | CCTBX_ASSERT( tmp_index < asu_hkl.size() ); | ^~~~~~~~~~~~ /<>/cctbx/xray/grouped_data.h: In instantiation of ‘cctbx::xray::grouped_data::merger::merger(scitbx::af::const_ref >, scitbx::af::const_ref, scitbx::af::const_ref, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&) [with FloatType = double]’: /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2, A3, A4, A5) [with A0 = boost::python::objects::reference_to_value >&>; A1 = boost::python::objects::reference_to_value&>; A2 = boost::python::objects::reference_to_value&>; A3 = boost::python::objects::reference_to_value; A4 = boost::python::objects::reference_to_value; A5 = boost::python::objects::reference_to_value; Value = cctbx::xray::grouped_data::merger; PyObject = _object]’ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<6>::apply::execute(PyObject*, t0, t1, t2, t3, t4, t5) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::vector6 >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>; PyObject = _object; t0 = const scitbx::af::const_ref >&; t1 = const scitbx::af::const_ref&; t2 = const scitbx::af::const_ref&; t3 = const cctbx::sgtbx::space_group&; t4 = const bool&; t5 = const cctbx::uctbx::unit_cell&]’ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::vector6 >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>; Arity = boost::mpl::size >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&> >; Holder = boost::python::objects::value_holder >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ /usr/include/boost/python/init.hpp:310:66: required from ‘void boost::python::detail::def_init_aux(ClassT&, const Signature&, NArgs, const CallPoliciesT&, const char*, const keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector6 >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>; NArgs = boost::mpl::size >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&> >; keyword_range = std::pair]’ /usr/include/boost/python/init.hpp:377:31: required from ‘static void boost::python::detail::define_class_init_helper<0>::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, const boost::python::detail::keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector6 >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>; NArgs = boost::mpl::size >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&> >; boost::python::detail::keyword_range = std::pair]’ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_ >; DerivedT = boost::python::init >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>]’ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&> >; classT = boost::python::class_ >]’ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_ >; DerivedVisitor = boost::python::init >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>]’ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>; W = cctbx::xray::grouped_data::merger; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_ >]’ /<>/cctbx/xray/boost_python/grouped_data.cpp:54:15: required from here /<>/cctbx/xray/grouped_data.h:151:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 151 | for (int ii=0;ii>/cctbx/xray/grouped_data.h:167:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 167 | for (int ii=0; ii>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/fable /<>/cctbx/xray/boost_python/sampled_model_density.cpp In file included from /<>/cctbx/xray/scatterer.h:5, from /<>/cctbx/xray/minimization.h:4, from /<>/cctbx/xray/boost_python/minimization.cpp:8: /<>/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /<>/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i>/cctbx/sgtbx/site_symmetry.h:6: /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:203:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:214:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] In file included from /<>/cctbx/xray/scatterer.h:5, from /<>/cctbx/xray/boost_python/parameter_map.cpp:10: /<>/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /<>/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i>/cctbx/sgtbx/site_symmetry.h:6: /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:203:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:214:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] In file included from /<>/cctbx/xray/scatterer.h:5, from /<>/cctbx/xray/scattering_type_registry.h:4, from /<>/cctbx/xray/sampling_base.h:4, from /<>/cctbx/xray/sampled_model_density.h:6, from /<>/cctbx/xray/boost_python/sampled_model_density.cpp:3: /<>/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /<>/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i>/cctbx/xray/boost_python/parameter_map.cpp:9: /<>/cctbx/xray/parameter_map.h: In instantiation of ‘void cctbx::xray::parameter_map::init_scatterer_part(const scitbx::af::const_ref&) [with XRayScattererType = cctbx::xray::scatterer<>]’: /<>/cctbx/xray/parameter_map.h:54:7: required from ‘cctbx::xray::parameter_map::parameter_map(const scitbx::af::const_ref&) [with XRayScattererType = cctbx::xray::scatterer<>]’ /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0) [with A0 = boost::python::objects::reference_to_value, scitbx::af::trivial_accessor>&>; Value = cctbx::xray::parameter_map >; PyObject = _object]’ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<1>::apply::execute(PyObject*, t0) [with Holder = boost::python::objects::value_holder > >; ArgList = boost::mpl::vector1, scitbx::af::trivial_accessor>&>; PyObject = _object; t0 = const scitbx::af::const_ref, scitbx::af::trivial_accessor>&]’ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::vector1, scitbx::af::trivial_accessor>&>; Arity = boost::mpl::size, scitbx::af::trivial_accessor>&> >; Holder = boost::python::objects::value_holder > >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ /usr/include/boost/python/init.hpp:310:66: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_ >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>; DerivedT = boost::python::init, scitbx::af::trivial_accessor>&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_>]’ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor, scitbx::af::trivial_accessor>&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >; classT = boost::python::class_ >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_ >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>; DerivedVisitor = boost::python::init, scitbx::af::trivial_accessor>&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_>]’ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init, scitbx::af::trivial_accessor>&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_>; W = cctbx::xray::parameter_map >; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_ >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ /<>/cctbx/xray/boost_python/parameter_map.cpp:46:11: required from ‘static void cctbx::xray::boost_python::parameter_map_wrapper::wrap(const char*) [with XRayScattererType = cctbx::xray::scatterer<>]’ /<>/cctbx/xray/boost_python/parameter_map.cpp:60:50: required from here /<>/cctbx/xray/parameter_map.h:61:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 61 | for(int i_sc=0; i_sc < scatterers.size(); ++i_sc) { | ~~~~~^~~~~~~~~~~~~~~~~~~ g++ -o cctbx/xray/boost_python/sampling_base.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/fable /<>/cctbx/xray/boost_python/sampling_base.cpp In file included from /<>/cctbx/sgtbx/site_symmetry.h:6: /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:203:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:214:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] In file included from /<>/scitbx/array_family/small.h:4, from /<>/cctbx/uctbx.h:11, from /<>/cctbx/sgtbx/change_of_basis_op.h:6, from /<>/cctbx/sgtbx/tr_group.h:4, from /<>/cctbx/sgtbx/space_group.h:4, from /<>/cctbx/sgtbx/site_constraints.h:4, from /<>/cctbx/sgtbx/site_symmetry.h:4: /<>/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /<>/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ /<>/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ /<>/cctbx/xray/scattering_type_registry.h:192:40: required from here /<>/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ g++ -o cctbx/xray/boost_python/scatterer.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/fable /<>/cctbx/xray/boost_python/scatterer.cpp In file included from /<>/cctbx/xray/scatterer.h:5, from /<>/cctbx/xray/scattering_type_registry.h:4, from /<>/cctbx/xray/sampling_base.h:4, from /<>/cctbx/xray/boost_python/sampling_base.cpp:3: /<>/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /<>/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i>/cctbx/sgtbx/site_symmetry.h:6: /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:203:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:214:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] In file included from /<>/scitbx/array_family/small.h:4, from /<>/cctbx/uctbx.h:11, from /<>/cctbx/sgtbx/change_of_basis_op.h:6, from /<>/cctbx/sgtbx/tr_group.h:4, from /<>/cctbx/sgtbx/space_group.h:4, from /<>/cctbx/sgtbx/site_constraints.h:4, from /<>/cctbx/sgtbx/site_symmetry.h:4: /<>/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /<>/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ /<>/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ /<>/cctbx/xray/scattering_type_registry.h:192:40: required from here /<>/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ g++ -o cctbx/xray/boost_python/scatterer_flags.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/fable /<>/cctbx/xray/boost_python/scatterer_flags.cpp In file included from /<>/cctbx/xray/scatterer.h:5, from /<>/cctbx/xray/scatterer_utils.h:4, from /<>/cctbx/xray/boost_python/scatterer.cpp:3: /<>/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /<>/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i>/cctbx/xray/scatterer_utils.h: In instantiation of ‘static void cctbx::xray::inelastic_form_factors::set(const scitbx::af::ref&, float, bool) [with ScattererType = cctbx::xray::scatterer<>; TableType = cctbx::eltbx::henke::table]’: /<>/cctbx/xray/boost_python/scatterer.cpp:349:54: required from here /<>/cctbx/xray/scatterer_utils.h:426:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 426 | for (int i=0; i < scatterers.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~ /<>/cctbx/xray/scatterer_utils.h: In instantiation of ‘static void cctbx::xray::inelastic_form_factors::set(const scitbx::af::ref&, float, bool) [with ScattererType = cctbx::xray::scatterer<>; TableType = cctbx::eltbx::sasaki::table]’: /<>/cctbx/xray/boost_python/scatterer.cpp:353:55: required from here /<>/cctbx/xray/scatterer_utils.h:426:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] In file included from /<>/cctbx/sgtbx/site_symmetry.h:6: /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:203:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:214:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] g++ -o cctbx/xray/boost_python/scattering_type_registry.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/fable /<>/cctbx/xray/boost_python/scattering_type_registry.cpp In file included from /<>/cctbx/xray/scatterer.h:5, from /<>/cctbx/xray/boost_python/scatterer_flags.cpp:7: /<>/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /<>/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i>/cctbx/sgtbx/site_symmetry.h:6: /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:203:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:214:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /<>/cctbx/sgtbx/tensor_rank_2.h:9, from /<>/cctbx/sgtbx/site_symmetry.h:5: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::xray::scatterer_flags; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ /<>/cctbx/xray/boost_python/scatterer_flags.cpp:142:44: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o cctbx/xray/boost_python/sigmaa.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/fable /<>/cctbx/xray/boost_python/sigmaa.cpp In file included from /<>/cctbx/xray/scatterer.h:5, from /<>/cctbx/xray/scattering_type_registry.h:4, from /<>/cctbx/xray/boost_python/scattering_type_registry.cpp:3: /<>/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /<>/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i>/cctbx/xray/boost_python/scattering_type_registry.cpp: At global scope: /<>/cctbx/xray/boost_python/scattering_type_registry.cpp:49:10: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 49 | std::auto_ptr | ^~~~~~~~ In file included from /usr/include/c++/13/memory:78, from /<>/scitbx/array_family/detail/misc.h:5, from /<>/scitbx/array_family/tiny_plain.h:5, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/vec3.h:4, from /<>/scitbx/mat3.h:6, from /<>/scitbx/sym_mat3.h:4, from /<>/cctbx/xray/scatterer_flags.h:5, from /<>/cctbx/xray/scatterer.h:4: /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ /<>/cctbx/xray/boost_python/scattering_type_registry.cpp: In static member function ‘static std::auto_ptr cctbx::xray::boost_python::{anonymous}::scattering_type_registry_wrappers::constructor_for_pickle(const boost::python::dict&, const boost::python::list&, const cctbx::xray::scattering_type_registry::unique_counts_t&)’: /<>/cctbx/xray/boost_python/scattering_type_registry.cpp:55:12: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 55 | std::auto_ptr self(new w_t); | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ In file included from /<>/cctbx/sgtbx/site_symmetry.h:6: /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:203:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:214:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] In file included from /<>/cctbx/xray/scatterer.h:5, from /<>/cctbx/xray/sigmaa.h:4, from /<>/cctbx/xray/boost_python/sigmaa.cpp:8: /<>/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /<>/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i>/scitbx/array_family/small.h:4, from /<>/cctbx/uctbx.h:11, from /<>/cctbx/sgtbx/change_of_basis_op.h:6, from /<>/cctbx/sgtbx/tr_group.h:4, from /<>/cctbx/sgtbx/space_group.h:4, from /<>/cctbx/sgtbx/site_constraints.h:4, from /<>/cctbx/sgtbx/site_symmetry.h:4: /<>/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /<>/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ /<>/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ /<>/cctbx/xray/scattering_type_registry.h:192:40: required from here /<>/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ In file included from /<>/cctbx/sgtbx/site_symmetry.h:6: /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:203:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:214:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] g++ -o cctbx/xray/boost_python/structure_factors_direct.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/fable /<>/cctbx/xray/boost_python/structure_factors_direct.cpp g++ -o cctbx/xray/boost_python/structure_factors_simple.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/fable /<>/cctbx/xray/boost_python/structure_factors_simple.cpp In file included from /<>/cctbx/xray/scatterer.h:5, from /<>/cctbx/xray/scattering_type_registry.h:4, from /<>/cctbx/xray/structure_factors_direct.h:4, from /<>/cctbx/xray/boost_python/structure_factors_direct.cpp:3: /<>/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /<>/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i>/cctbx/sgtbx/site_symmetry.h:6: /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:203:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:214:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] In file included from /<>/scitbx/array_family/small.h:4, from /<>/cctbx/uctbx.h:11, from /<>/cctbx/sgtbx/change_of_basis_op.h:6, from /<>/cctbx/sgtbx/tr_group.h:4, from /<>/cctbx/sgtbx/space_group.h:4, from /<>/cctbx/sgtbx/site_constraints.h:4, from /<>/cctbx/sgtbx/site_symmetry.h:4: /<>/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /<>/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ /<>/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ /<>/cctbx/xray/scattering_type_registry.h:192:40: required from here /<>/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ In file included from /<>/cctbx/xray/scatterer.h:5, from /<>/cctbx/xray/scattering_type_registry.h:4, from /<>/cctbx/xray/structure_factors_simple.h:12, from /<>/cctbx/xray/boost_python/structure_factors_simple.cpp:3: /<>/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /<>/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/fable /<>/cctbx/xray/boost_python/targets.cpp In file included from /<>/cctbx/sgtbx/site_symmetry.h:6: /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:203:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:214:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] In file included from /<>/scitbx/array_family/small.h:4, from /<>/cctbx/uctbx.h:11, from /<>/cctbx/sgtbx/change_of_basis_op.h:6, from /<>/cctbx/sgtbx/tr_group.h:4, from /<>/cctbx/sgtbx/space_group.h:4, from /<>/cctbx/sgtbx/site_constraints.h:4, from /<>/cctbx/sgtbx/site_symmetry.h:4: /<>/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /<>/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ /<>/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ /<>/cctbx/xray/scattering_type_registry.h:192:40: required from here /<>/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ g++ -o cctbx/xray/boost_python/twin_components.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/fable /<>/cctbx/xray/boost_python/twin_components.cpp g++ -o cctbx/xray/boost_python/twin_targets.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/fable /<>/cctbx/xray/boost_python/twin_targets.cpp g++ -o cctbx/xray/boost_python/xray_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/fable /<>/cctbx/xray/boost_python/xray_ext.cpp g++ -o cctbx/xray/observations/boost_python/observations.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/xray/observations/boost_python/observations.cpp In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_ptr.hpp:25, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /<>/scitbx/stl/vector_wrapper.h:4, from /<>/cctbx/xray/boost_python/twin_components.cpp:6: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared*>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared*>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::shared*>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:300:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_variable_capacity::tuple_mapping_variable_capacity() [with ContainerType = scitbx::af::shared*>]’ /<>/cctbx/xray/boost_python/twin_components.cpp:91:77: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared*>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared*>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::shared*>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:300:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_variable_capacity::tuple_mapping_variable_capacity() [with ContainerType = scitbx::af::shared*>]’ /<>/cctbx/xray/boost_python/twin_components.cpp:92:78: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] In file included from /<>/cctbx/miller/match_indices.h:4, from /<>/cctbx/miller/lookup_utils.h:11, from /<>/cctbx/xray/twin_targets.h:14, from /<>/cctbx/xray/boost_python/twin_targets.cpp:3: /<>/cctbx/miller/match.h:16:34: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 16 | struct additive_sigma : std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/istream:40, from /usr/include/c++/13/sstream:40, from /<>/scitbx/error_utils.h:4, from /<>/scitbx/error.h:16, from /<>/scitbx/array_family/ref.h:4, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/array_family/shared_plain.h:31, from /<>/scitbx/array_family/shared.h:4, from /<>/cctbx/xray/twin_targets.h:4: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /<>/cctbx/miller/match.h:18:20: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 18 | typedef std::binary_function base_type; | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /<>/cctbx/miller/match.h:31:27: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 31 | struct average : std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /<>/cctbx/miller/match.h:33:20: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 33 | typedef std::binary_function base_type; | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /<>/cctbx/xray/twin_targets.h: In instantiation of ‘scitbx::af::shared cctbx::xray::twin_targets::twin_completion::get_free_model_selection(scitbx::af::const_ref >, const scitbx::af::const_ref&) [with FloatType = double]’: /<>/cctbx/xray/boost_python/twin_targets.cpp:42:50: required from here /<>/cctbx/xray/twin_targets.h:128:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 128 | CCTBX_ASSERT( index < flags.size() ); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/cctbx/xray/twin_targets.h:128:11: note: in expansion of macro ‘CCTBX_ASSERT’ 128 | CCTBX_ASSERT( index < flags.size() ); | ^~~~~~~~~~~~ /<>/cctbx/xray/twin_targets.h: In instantiation of ‘FloatType cctbx::xray::twin_targets::hemihedral_r_values::r_intensity_abs(const scitbx::af::const_ref&, const scitbx::af::const_ref >&, const scitbx::af::const_ref&, const FloatType&) [with FloatType = double]’: /<>/cctbx/xray/boost_python/twin_targets.cpp:182:39: required from here /<>/cctbx/xray/twin_targets.h:559:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 559 | CCTBX_ASSERT( obs_size_ == i_obs.size() ); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/cctbx/xray/twin_targets.h:559:6: note: in expansion of macro ‘CCTBX_ASSERT’ 559 | CCTBX_ASSERT( obs_size_ == i_obs.size() ); | ^~~~~~~~~~~~ /<>/cctbx/xray/twin_targets.h:560:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 560 | CCTBX_ASSERT( calc_size_ == f_model.size() ); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/cctbx/xray/twin_targets.h:560:6: note: in expansion of macro ‘CCTBX_ASSERT’ 560 | CCTBX_ASSERT( calc_size_ == f_model.size() ); | ^~~~~~~~~~~~ /<>/cctbx/xray/twin_targets.h:561:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 561 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/cctbx/xray/twin_targets.h:561:6: note: in expansion of macro ‘CCTBX_ASSERT’ 561 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ^~~~~~~~~~~~ /<>/cctbx/xray/twin_targets.h: In instantiation of ‘FloatType cctbx::xray::twin_targets::hemihedral_r_values::r_intensity_sq(const scitbx::af::const_ref&, const scitbx::af::const_ref >&, const scitbx::af::const_ref&, const FloatType&) [with FloatType = double]’: /<>/cctbx/xray/boost_python/twin_targets.cpp:189:38: required from here /<>/cctbx/xray/twin_targets.h:604:30: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 604 | CCTBX_ASSERT( obs_size_ == i_obs.size() ); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/cctbx/xray/twin_targets.h:604:6: note: in expansion of macro ‘CCTBX_ASSERT’ 604 | CCTBX_ASSERT( obs_size_ == i_obs.size() ); | ^~~~~~~~~~~~ /<>/cctbx/xray/twin_targets.h:605:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 605 | CCTBX_ASSERT( calc_size_ == f_model.size() ); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/cctbx/xray/twin_targets.h:605:6: note: in expansion of macro ‘CCTBX_ASSERT’ 605 | CCTBX_ASSERT( calc_size_ == f_model.size() ); | ^~~~~~~~~~~~ /<>/cctbx/xray/twin_targets.h:606:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 606 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/cctbx/xray/twin_targets.h:606:6: note: in expansion of macro ‘CCTBX_ASSERT’ 606 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ^~~~~~~~~~~~ /<>/cctbx/xray/twin_targets.h: In instantiation of ‘FloatType cctbx::xray::twin_targets::hemihedral_r_values::r_amplitude_abs(const scitbx::af::const_ref&, const scitbx::af::const_ref >&, const scitbx::af::const_ref&, const FloatType&) [with FloatType = double]’: /<>/cctbx/xray/boost_python/twin_targets.cpp:196:39: required from here /<>/cctbx/xray/twin_targets.h:649:30: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 649 | CCTBX_ASSERT( obs_size_ == f_obs.size() ); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/cctbx/xray/twin_targets.h:649:6: note: in expansion of macro ‘CCTBX_ASSERT’ 649 | CCTBX_ASSERT( obs_size_ == f_obs.size() ); | ^~~~~~~~~~~~ /<>/cctbx/xray/twin_targets.h:650:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 650 | CCTBX_ASSERT( calc_size_ == f_model.size() ); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/cctbx/xray/twin_targets.h:650:6: note: in expansion of macro ‘CCTBX_ASSERT’ 650 | CCTBX_ASSERT( calc_size_ == f_model.size() ); | ^~~~~~~~~~~~ /<>/cctbx/xray/twin_targets.h:651:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 651 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/cctbx/xray/twin_targets.h:651:6: note: in expansion of macro ‘CCTBX_ASSERT’ 651 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ^~~~~~~~~~~~ /<>/cctbx/xray/twin_targets.h: In instantiation of ‘FloatType cctbx::xray::twin_targets::hemihedral_r_values::r_amplitude_sq(const scitbx::af::const_ref&, const scitbx::af::const_ref >&, const scitbx::af::const_ref&, const FloatType&) [with FloatType = double]’: /<>/cctbx/xray/boost_python/twin_targets.cpp:203:38: required from here /<>/cctbx/xray/twin_targets.h:697:30: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 697 | CCTBX_ASSERT( obs_size_ == f_obs.size() ); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/cctbx/xray/twin_targets.h:697:6: note: in expansion of macro ‘CCTBX_ASSERT’ 697 | CCTBX_ASSERT( obs_size_ == f_obs.size() ); | ^~~~~~~~~~~~ /<>/cctbx/xray/twin_targets.h:698:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 698 | CCTBX_ASSERT( calc_size_ == f_model.size() ); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/cctbx/xray/twin_targets.h:698:6: note: in expansion of macro ‘CCTBX_ASSERT’ 698 | CCTBX_ASSERT( calc_size_ == f_model.size() ); | ^~~~~~~~~~~~ /<>/cctbx/xray/twin_targets.h:699:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 699 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/cctbx/xray/twin_targets.h:699:6: note: in expansion of macro ‘CCTBX_ASSERT’ 699 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ^~~~~~~~~~~~ /<>/cctbx/xray/twin_targets.h: In instantiation of ‘scitbx::af::tiny, 2> cctbx::xray::twin_targets::hemihedral_detwinner::detwin_with_model_data(const scitbx::af::const_ref&, const scitbx::af::const_ref&, const scitbx::af::const_ref >&, const FloatType&) const [with FloatType = double]’: /<>/cctbx/xray/boost_python/twin_targets.cpp:263:45: required from here /<>/cctbx/xray/twin_targets.h:997:45: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 997 | CCTBX_ASSERT(i_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/cctbx/xray/twin_targets.h:997:19: note: in expansion of macro ‘CCTBX_ASSERT’ 997 | CCTBX_ASSERT(i_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /<>/cctbx/xray/twin_targets.h:1003:47: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 1003 | CCTBX_ASSERT(sig_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/cctbx/xray/twin_targets.h:1003:19: note: in expansion of macro ‘CCTBX_ASSERT’ 1003 | CCTBX_ASSERT(sig_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /<>/cctbx/xray/twin_targets.h:1006:41: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 1006 | CCTBX_ASSERT(f_model.size() > loc_calc); // XXX trap for long standing seg. fault bug /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/cctbx/xray/twin_targets.h:1006:13: note: in expansion of macro ‘CCTBX_ASSERT’ 1006 | CCTBX_ASSERT(f_model.size() > loc_calc); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /<>/cctbx/xray/twin_targets.h:1010:47: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 1010 | CCTBX_ASSERT(f_model.size() > loc_twin_calc); // XXX trap for long standing seg. fault bug /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/cctbx/xray/twin_targets.h:1010:19: note: in expansion of macro ‘CCTBX_ASSERT’ 1010 | CCTBX_ASSERT(f_model.size() > loc_twin_calc); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /<>/cctbx/xray/twin_targets.h: In instantiation of ‘scitbx::af::tiny, 2> cctbx::xray::twin_targets::hemihedral_detwinner::detwin_with_model_data(const scitbx::af::const_ref&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const FloatType&) const [with FloatType = double]’: /<>/cctbx/xray/boost_python/twin_targets.cpp:275:45: required from here /<>/cctbx/xray/twin_targets.h:936:43: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 936 | CCTBX_ASSERT(i_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/cctbx/xray/twin_targets.h:936:17: note: in expansion of macro ‘CCTBX_ASSERT’ 936 | CCTBX_ASSERT(i_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /<>/cctbx/xray/twin_targets.h:942:47: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 942 | CCTBX_ASSERT(sig_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/cctbx/xray/twin_targets.h:942:19: note: in expansion of macro ‘CCTBX_ASSERT’ 942 | CCTBX_ASSERT(sig_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /<>/cctbx/xray/twin_targets.h:945:45: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 945 | CCTBX_ASSERT(f_model.size() > loc_calc); // XXX trap for long standing seg. fault bug /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/cctbx/xray/twin_targets.h:945:17: note: in expansion of macro ‘CCTBX_ASSERT’ 945 | CCTBX_ASSERT(f_model.size() > loc_calc); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /<>/cctbx/xray/twin_targets.h:948:45: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 948 | CCTBX_ASSERT(f_model.size() > loc_twin_calc); // XXX trap for long standing seg. fault bug /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/cctbx/xray/twin_targets.h:948:17: note: in expansion of macro ‘CCTBX_ASSERT’ 948 | CCTBX_ASSERT(f_model.size() > loc_twin_calc); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /<>/cctbx/xray/twin_targets.h: In instantiation of ‘cctbx::xray::twin_targets::hemihedral_r_values::hemihedral_r_values(const scitbx::af::const_ref >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&) [with FloatType = double]’: /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2, A3, A4) [with A0 = boost::python::objects::reference_to_value >&>; A1 = boost::python::objects::reference_to_value >&>; A2 = boost::python::objects::reference_to_value; A3 = boost::python::objects::reference_to_value; A4 = boost::python::objects::reference_to_value&>; Value = cctbx::xray::twin_targets::hemihedral_r_values; PyObject = _object]’ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<5>::apply::execute(PyObject*, t0, t1, t2, t3, t4) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::vector5 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>; PyObject = _object; t0 = const scitbx::af::const_ref >&; t1 = const scitbx::af::const_ref >&; t2 = const cctbx::sgtbx::space_group&; t3 = const bool&; t4 = const scitbx::mat3&]’ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::vector5 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>; Arity = boost::mpl::size >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&> >; Holder = boost::python::objects::value_holder >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ /usr/include/boost/python/init.hpp:310:66: required from ‘void boost::python::detail::def_init_aux(ClassT&, const Signature&, NArgs, const CallPoliciesT&, const char*, const keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector5 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>; NArgs = boost::mpl::size >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&> >; keyword_range = std::pair]’ /usr/include/boost/python/init.hpp:377:31: required from ‘static void boost::python::detail::define_class_init_helper<0>::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, const boost::python::detail::keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector5 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>; NArgs = boost::mpl::size >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&> >; boost::python::detail::keyword_range = std::pair]’ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_ >; DerivedT = boost::python::init >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>]’ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&> >; classT = boost::python::class_ >]’ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_ >; DerivedVisitor = boost::python::init >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>]’ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>; W = cctbx::xray::twin_targets::hemihedral_r_values; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_ >]’ /<>/cctbx/xray/boost_python/twin_targets.cpp:169:13: required from here /<>/cctbx/xray/twin_targets.h:544:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 544 | for (long ii=0;ii>/cctbx/xray/twin_targets.h:10: /<>/scitbx/math/quadrature.h: In instantiation of ‘FloatType scitbx::math::quadrature::gauss_legendre_engine::refine(const FloatType&) [with FloatType = double]’: /<>/scitbx/math/quadrature.h:523:14: required from ‘scitbx::math::quadrature::gauss_legendre_engine::gauss_legendre_engine(const int&) [with FloatType = double]’ /<>/cctbx/xray/twin_targets.h:1070:68: required from ‘cctbx::xray::twin_targets::single_twin_likelihood::single_twin_likelihood(const FloatType&, const FloatType&, const FloatType&, const FloatType&, const FloatType&, const FloatType&, const FloatType&, const FloatType&, const bool&, const bool&, const FloatType&, const FloatType&, const FloatType&, const int&) [with FloatType = double]’ /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2, A3, A4, A5, A6, A7, A8, A9, A10, A11, A12, A13) [with A0 = boost::python::objects::reference_to_value; A1 = boost::python::objects::reference_to_value; A2 = boost::python::objects::reference_to_value; A3 = boost::python::objects::reference_to_value; A4 = boost::python::objects::reference_to_value; A5 = boost::python::objects::reference_to_value; A6 = boost::python::objects::reference_to_value; A7 = boost::python::objects::reference_to_value; A8 = boost::python::objects::reference_to_value; A9 = boost::python::objects::reference_to_value; A10 = boost::python::objects::reference_to_value; A11 = boost::python::objects::reference_to_value; A12 = boost::python::objects::reference_to_value; A13 = boost::python::objects::reference_to_value; Value = cctbx::xray::twin_targets::single_twin_likelihood; PyObject = _object]’ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<14>::apply::execute(PyObject*, t0, t1, t2, t3, t4, t5, t6, t7, t8, t9, t10, t11, t12, t13) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::vector14; PyObject = _object; t0 = const double&; t1 = const double&; t2 = const double&; t3 = const double&; t4 = const double&; t5 = const double&; t6 = const double&; t7 = const double&; t8 = const bool&; t9 = const bool&; t10 = const double&; t11 = const double&; t12 = const double&; t13 = const int&]’ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/include/boost/python/init.hpp:377:31: required from ‘static void boost::python::detail::define_class_init_helper<0>::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, const boost::python::detail::keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector14; NArgs = boost::mpl::size >; boost::python::detail::keyword_range = std::pair]’ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_ >; DerivedT = boost::python::init]’ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor >; classT = boost::python::class_ >]’ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_ >; DerivedVisitor = boost::python::init]’ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init; W = cctbx::xray::twin_targets::single_twin_likelihood; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_ >]’ /<>/cctbx/xray/boost_python/twin_targets.cpp:343:14: required from here /<>/scitbx/math/quadrature.h:546:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 546 | for (int ii=0;ii>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/cctbx/xray/observations/boost_python/observations_ext.cpp g++ -o cctbx/xray/targets/shelxl_wght_ls_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/fable /<>/cctbx/xray/targets/shelxl_wght_ls_bpl.cpp In file included from /<>/fable/fem/io.hpp:8, from /<>/fable/fem/close_chain.hpp:4, from /<>/fable/fem/common.hpp:4, from /<>/fable/fem/read.hpp:4, from /<>/fable/fem/major_types.hpp:6, from /<>/fable/fem.hpp:10, from /<>/cctbx/xray/targets/shelxl_wght_ls.hpp:1, from /<>/cctbx/xray/targets/shelxl_wght_ls_bpl.cpp:23: /<>/fable/fem/utils/simple_streams.hpp: In member function ‘virtual void fem::utils::simple_ostream_to_char_ptr_and_size::put(char)’: /<>/fable/fem/utils/simple_streams.hpp:63:13: warning: comparison of integer expressions of different signedness: ‘fem::ssize_t’ {aka ‘long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 63 | if (i < sz) s[i++] = c; | ~~^~~~ /<>/fable/fem/common.hpp: In member function ‘void fem::common::getarg(int, fem::str_ref) const’: /<>/fable/fem/common.hpp:40:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 40 | if (pos < 0 || pos >= command_line_args.buffer.size()) { | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/fable/fem/utils/string_to_double_fmt.hpp:4, from /<>/fable/fem/read.hpp:9: /<>/fable/fem/utils/string_to_double.hpp: In member function ‘void fem::utils::string_to_double::convert(fem::utils::simple_istream&, unsigned int, int)’: /<>/fable/fem/utils/string_to_double.hpp:115:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 115 | if (dexp <= ad_hoc_limits::max_digit_count) { | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/fable/fem/read.hpp: In member function ‘double fem::read_loop::read_fmt_double()’: /<>/fable/fem/read.hpp:653:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 653 | if (iw+1 != ed.size()) { | ~~~~~^~~~~~~~~~~~ In file included from /<>/fable/fem/variant.hpp:5, from /<>/fable/fem/major_types.hpp:7: /<>/fable/fem/utils/equivalence.hpp: In member function ‘void fem::utils::equivalence::array_alignment::infer_diffs0_from_diff_matrix()’: /<>/fable/fem/utils/equivalence.hpp:93:28: warning: comparison of integer expressions of different signedness: ‘const fem::ssize_t’ {aka ‘const long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 93 | if (c0e[0] == i0) { | ~~~~~~~^~~~~ In file included from /<>/fable/fem/major_types.hpp:8: /<>/fable/fem/write.hpp: In destructor ‘fem::write_loop::~write_loop()’: /<>/fable/fem/write.hpp:704:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 704 | while (pos < internal_file_len) { | ~~~~^~~~~~~~~~~~~~~~~~~ g++ -o chiltbx/handle_test.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<> /<>/chiltbx/handle_test.cpp g++ -o chiltbx/handle_test -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread chiltbx/handle_test.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system g++ -o cma_es/cma/cmaes.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/<> /<>/cma_es/cma/cmaes.cpp g++ -o cma_es/cma_es_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/<> /<>/cma_es/cma_es_ext.cpp g++ -o dxtbx/src/dxtbx/boost_python/compression.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/<> -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -DBUILD_CBF -I/<> -I/<>/.pybuild/cpython3_3.12/base/include -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/dxtbx/src -I/usr/include/cbflib -I/<>/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /<>/dxtbx/src/dxtbx/boost_python/compression.cc /<>/dxtbx/src/dxtbx/boost_python/compression.cc: In function ‘unsigned int dxtbx::boost_python::cbf_decompress(const char*, std::size_t, int*, std::size_t)’: /<>/dxtbx/src/dxtbx/boost_python/compression.cc:123:50: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 123 | while ((j < packed_sz) && ((values - original) < values_sz)) { | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/compression.cc: In function ‘void dxtbx::boost_python::rod_TY6_decompress(int*, const char*, const char*, int, int)’: /<>/dxtbx/src/dxtbx/boost_python/compression.cc:203:26: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 203 | for (size_t iy = 0; iy < slow; iy++) { | ~~~^~~~~~ /<>/dxtbx/src/dxtbx/boost_python/compression.cc:224:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 224 | for (int k = 0; k < nblock; k++) { | ~~^~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/compression.cc:250:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 250 | for (int j = 0; j < nbit; j++) { | ~~^~~~~~ /<>/dxtbx/src/dxtbx/boost_python/compression.cc:257:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 257 | for (int j = 0; j < BLOCKSIZE; j++) { | ~~^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/compression.cc:278:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 278 | for (int i = 0; i < nrest; i++) { | ~~^~~~~~~ g++ -o dxtbx/src/dxtbx/boost_python/ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/<> -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -DBUILD_CBF -I/<> -I/<>/.pybuild/cpython3_3.12/base/include -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/dxtbx/src -I/usr/include/cbflib -I/<>/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /<>/dxtbx/src/dxtbx/boost_python/ext.cpp g++ -o dxtbx/src/dxtbx/boost_python/flumpy.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/<> -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DBUILD_CBF -I/<> -I/<>/.pybuild/cpython3_3.12/base/include -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/dxtbx/src -I/usr/include/cbflib -I/<>/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc g++ -o dxtbx/src/dxtbx/boost_python/imageset_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/<> -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -DBUILD_CBF -I/<> -I/<>/.pybuild/cpython3_3.12/base/include -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/dxtbx/src -I/usr/include/cbflib -I/<>/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /<>/dxtbx/src/dxtbx/boost_python/imageset_ext.cc g++ -o dxtbx/src/dxtbx/format/boost_python/cbf_read_buffer.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/<> -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -DBUILD_CBF -I/<> -I/<>/.pybuild/cpython3_3.12/base/include -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/dxtbx/src -I/usr/include/cbflib -I/<>/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /<>/dxtbx/src/dxtbx/format/boost_python/cbf_read_buffer.cpp In file included from /<>/scitbx/error.h:16, from /<>/scitbx/array_family/ref.h:4, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/array_family/shared_plain.h:31, from /<>/scitbx/array_family/shared.h:4, from /<>/dxtbx/src/dxtbx/boost_python/ext.cpp:3: /<>/dxtbx/src/dxtbx/boost_python/ext.cpp: In function ‘scitbx::af::flex_int dxtbx::boost_python::uncompress(const boost::python::api::object&, const int&, const int&)’: /<>/dxtbx/src/dxtbx/boost_python/ext.cpp:184:21: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 184 | DXTBX_ASSERT(nn == (slow * fast)); | ~~~^~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/ext.cpp:184:5: note: in expansion of macro ‘DXTBX_ASSERT’ 184 | DXTBX_ASSERT(nn == (slow * fast)); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/ext.cpp: In function ‘void dxtbx::boost_python::radial_average(scitbx::af::versa >&, scitbx::af::versa >&, const scitbx::vec2&, scitbx::af::shared, scitbx::af::shared, scitbx::af::shared, double, double, const scitbx::vec2&, const scitbx::vec2&)’: /<>/dxtbx/src/dxtbx/boost_python/ext.cpp:219:43: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 219 | for (std::size_t y = upper_left[1]; y < lower_right[1]; y++) { /<>/dxtbx/src/dxtbx/boost_python/ext.cpp:220:45: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 220 | for (std::size_t x = upper_left[0]; x < lower_right[0]; x++) { /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = bool; grid = scitbx::af::versa >]’: /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:247:31: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = long unsigned int; grid = scitbx::af::versa >]’: /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:247:31: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/format/boost_python/cbf_read_buffer.cpp:10:1: warning: ‘typedef’ was ignored in this declaration 10 | typedef struct cbf_handle_struct; | ^~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = unsigned char; grid = scitbx::af::versa >]’: /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = short unsigned int; grid = scitbx::af::versa >]’: /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = unsigned int; grid = scitbx::af::versa >]’: /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = int; grid = scitbx::af::versa >]’: /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = long int; grid = scitbx::af::versa >]’: /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = signed char; grid = scitbx::af::versa >]’: /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = short int; grid = scitbx::af::versa >]’: /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = float; grid = scitbx::af::versa >]’: /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = double; grid = scitbx::af::versa >]’: /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = double; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:88:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 88 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:90:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 90 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = int; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:88:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 88 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:90:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 90 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = double; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:138:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 138 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:140:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 140 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = double; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:166:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 166 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:168:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 168 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = long unsigned int; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:191:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 191 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:193:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 193 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = double; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:215:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 215 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:217:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 217 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = int; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:113:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 113 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/flumpy.cc:115:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 115 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /<>/dxtbx/src/dxtbx/imageset.h:24, from /<>/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:9: /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:549:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 549 | vec3 direction_; | ^~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:91:5: warning: when initialized here [-Wreorder] 91 | Beam() | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:124:5: warning: when initialized here [-Wreorder] 124 | Beam(vec3 direction, double wavelength) | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:163:5: warning: when initialized here [-Wreorder] 163 | Beam(vec3 direction, | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:191:5: warning: when initialized here [-Wreorder] 191 | Beam(vec3 direction, | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:225:5: warning: when initialized here [-Wreorder] 225 | Beam(vec3 direction, | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /<>/dxtbx/src/dxtbx/model/beam.h:740:52: warning: left operand of comma operator has no effect [-Wunused-value] 740 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /<>/dxtbx/src/dxtbx/model/beam.h:740:60: warning: right operand of comma operator has no effect [-Wunused-value] 740 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /<>/dxtbx/src/dxtbx/model/panel.h:22, from /<>/dxtbx/src/dxtbx/model/detector.h:25, from /<>/dxtbx/src/dxtbx/imageset.h:25: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /<>/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /<>/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ g++ -o dxtbx/src/dxtbx/format/boost_python/image_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/<> -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -DBUILD_CBF -I/<> -I/<>/.pybuild/cpython3_3.12/base/include -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/dxtbx/src -I/usr/include/cbflib -I/<>/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /<>/dxtbx/src/dxtbx/format/boost_python/image_ext.cc In file included from /<>/dxtbx/src/dxtbx/model/scan.h:22, from /<>/dxtbx/src/dxtbx/imageset.h:27: /<>/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /<>/dxtbx/src/dxtbx/model/scan_helpers.h:85:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 85 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan()’: /<>/dxtbx/src/dxtbx/model/scan.h:504:32: warning: ‘dxtbx::model::Scan::epochs_’ will be initialized after [-Wreorder] 504 | scitbx::af::shared epochs_; | ^~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:502:9: warning: ‘int dxtbx::model::Scan::batch_offset_’ [-Wreorder] 502 | int batch_offset_; | ^~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:39:5: warning: when initialized here [-Wreorder] 39 | Scan() | ^~~~ In file included from /<>/scitbx/error.h:16, from /<>/scitbx/array_family/ref.h:4, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/array_family/shared_plain.h:31, from /<>/scitbx/array_family/shared.h:4, from /<>/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:6: /<>/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, scitbx::vec2, const scitbx::af::shared&, const scitbx::af::shared&, int)’: /<>/dxtbx/src/dxtbx/model/scan.h:99:43: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 99 | DXTBX_ASSERT(exposure_times_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:99:7: note: in expansion of macro ‘DXTBX_ASSERT’ 99 | DXTBX_ASSERT(exposure_times_.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:100:35: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 100 | DXTBX_ASSERT(epochs_.size() == num_images_); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:100:7: note: in expansion of macro ‘DXTBX_ASSERT’ 100 | DXTBX_ASSERT(epochs_.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /<>/dxtbx/src/dxtbx/model/scan.h:231:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 231 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:231:7: note: in expansion of macro ‘DXTBX_ASSERT’ 231 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /<>/dxtbx/src/dxtbx/model/scan.h:237:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 237 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:237:7: note: in expansion of macro ‘DXTBX_ASSERT’ 237 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ g++ -o dxtbx/src/dxtbx/format/boost_python/nexus_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/<> -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -DBUILD_CBF -I/<> -I/<>/.pybuild/cpython3_3.12/base/include -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/dxtbx/src -I/usr/include/cbflib -I/<>/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /<>/dxtbx/src/dxtbx/format/boost_python/nexus_ext.cc In file included from /<>/dxtbx/src/dxtbx/masking/goniometer_shadow_masking.h:12, from /<>/dxtbx/src/dxtbx/imageset.h:30: /<>/dxtbx/src/dxtbx/masking/masking.h: In function ‘void dxtbx::masking::mask_untrusted_circle(scitbx::af::ref >, double, double, double)’: /<>/dxtbx/src/dxtbx/masking/masking.h:79:32: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 79 | for (std::size_t j = y0; j < y1; ++j) { | ~~^~~~ /<>/dxtbx/src/dxtbx/masking/masking.h:80:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 80 | for (std::size_t i = x0; i < x1; ++i) { | ~~^~~~ /<>/dxtbx/src/dxtbx/masking/masking.h: In function ‘void dxtbx::masking::mask_untrusted_polygon(scitbx::af::ref >, const scitbx::af::const_ref >&)’: /<>/dxtbx/src/dxtbx/masking/masking.h:143:32: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 143 | for (std::size_t j = y0; j < y1; ++j) { | ~~^~~~ /<>/dxtbx/src/dxtbx/masking/masking.h:144:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 144 | for (std::size_t i = x0; i < x1; ++i) { | ~~^~~~ /<>/dxtbx/src/dxtbx/imageset.h: In member function ‘dxtbx::format::ImageBuffer dxtbx::ImageSet::get_raw_data(std::size_t)’: /<>/dxtbx/src/dxtbx/imageset.h:647:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 647 | if (data_cache_.index == index) { | ~~~~~~~~~~~~~~~~~~^~~~~~~~ /<>/dxtbx/src/dxtbx/imageset.h: In member function ‘dxtbx::format::Image dxtbx::ImageSet::get_raw_data_as_double(std::size_t)’: /<>/dxtbx/src/dxtbx/imageset.h:1115:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 1115 | if (double_raw_data_cache_.index == index) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ /<>/dxtbx/src/dxtbx/imageset.h: At global scope: /<>/dxtbx/src/dxtbx/imageset.h:1062:20: warning: ‘virtual dxtbx::ImageSet dxtbx::ImageSet::partial_set(boost::python::api::object, std::size_t, std::size_t) const’ was hidden [-Woverloaded-virtual=] 1062 | virtual ImageSet partial_set(boost::python::object reader, | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/imageset.h:1202:12: note: by ‘dxtbx::ImageSet dxtbx::ImageGrid::partial_set(std::size_t, std::size_t) const’ 1202 | ImageSet partial_set(std::size_t first, std::size_t last) const { | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/imageset.h: In constructor ‘dxtbx::ImageGrid::ImageGrid(const dxtbx::ImageSetData&, scitbx::af::int2)’: /<>/dxtbx/src/dxtbx/imageset.h:1138:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 1138 | DXTBX_ASSERT(grid_size[0] * grid_size[1] == size()); /<>/dxtbx/src/dxtbx/imageset.h:1138:5: note: in expansion of macro ‘DXTBX_ASSERT’ 1138 | DXTBX_ASSERT(grid_size[0] * grid_size[1] == size()); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/imageset.h: In constructor ‘dxtbx::ImageGrid::ImageGrid(const dxtbx::ImageSetData&, const scitbx::af::const_ref&, scitbx::af::int2)’: /<>/dxtbx/src/dxtbx/imageset.h:1152:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 1152 | DXTBX_ASSERT(grid_size[0] * grid_size[1] == size()); /<>/dxtbx/src/dxtbx/imageset.h:1152:5: note: in expansion of macro ‘DXTBX_ASSERT’ 1152 | DXTBX_ASSERT(grid_size[0] * grid_size[1] == size()); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/imageset.h: At global scope: /<>/dxtbx/src/dxtbx/imageset.h:1062:20: warning: ‘virtual dxtbx::ImageSet dxtbx::ImageSet::partial_set(boost::python::api::object, std::size_t, std::size_t) const’ was hidden [-Woverloaded-virtual=] 1062 | virtual ImageSet partial_set(boost::python::object reader, | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/imageset.h:1473:12: note: by ‘dxtbx::ImageSet dxtbx::ImageSequence::partial_set(std::size_t, std::size_t) const’ 1473 | ImageSet partial_set(std::size_t first, std::size_t last) const { | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/imageset.h: In constructor ‘dxtbx::ImageSequence::ImageSequence(const dxtbx::ImageSetData&, const dxtbx::ImageSet::beam_ptr&, const dxtbx::ImageSet::detector_ptr&, const dxtbx::ImageSet::goniometer_ptr&, const dxtbx::ImageSet::scan_ptr&)’: /<>/dxtbx/src/dxtbx/imageset.h:1237:23: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 1237 | if (data.size() != scan->get_num_images()) { | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/imageset.h: In constructor ‘dxtbx::ImageSequence::ImageSequence(const dxtbx::ImageSetData&, const scitbx::af::const_ref&, const dxtbx::ImageSet::beam_ptr&, const dxtbx::ImageSet::detector_ptr&, const dxtbx::ImageSet::goniometer_ptr&, const dxtbx::ImageSet::scan_ptr&)’: /<>/dxtbx/src/dxtbx/imageset.h:1276:26: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 1276 | if (indices.size() != scan->get_num_images()) { | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/imageset.h: In member function ‘void dxtbx::ImageSequence::set_scan(const dxtbx::ImageSet::scan_ptr&)’: /<>/dxtbx/src/dxtbx/imageset.h:1398:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 1398 | if (scan->get_num_images() != size()) { | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /<>/dxtbx/src/dxtbx/imageset.h:1414:41: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 1414 | DXTBX_ASSERT(scan->get_num_images() == size()); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /<>/dxtbx/src/dxtbx/imageset.h:1414:5: note: in expansion of macro ‘DXTBX_ASSERT’ 1414 | DXTBX_ASSERT(scan->get_num_images() == size()); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/imageset.h: In instantiation of ‘dxtbx::format::Image dxtbx::ImageSetData::get_image_from_tuple(boost::python::tuple) [with T = double]’: /<>/dxtbx/src/dxtbx/imageset.h:468:56: required from here /<>/dxtbx/src/dxtbx/imageset.h:501:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 501 | for (std::size_t i = 0; i < boost::python::len(obj); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/imageset.h: In instantiation of ‘dxtbx::format::Image dxtbx::ImageSetData::get_image_from_tuple(boost::python::tuple) [with T = float]’: /<>/dxtbx/src/dxtbx/imageset.h:470:55: required from here /<>/dxtbx/src/dxtbx/imageset.h:501:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] /<>/dxtbx/src/dxtbx/imageset.h: In instantiation of ‘dxtbx::format::Image dxtbx::ImageSetData::get_image_from_tuple(boost::python::tuple) [with T = int]’: /<>/dxtbx/src/dxtbx/imageset.h:472:53: required from here /<>/dxtbx/src/dxtbx/imageset.h:501:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] /<>/dxtbx/src/dxtbx/boost_python/imageset_ext.cc: In instantiation of ‘static void dxtbx::boost_python::ImageSetDataPickleSuite::set_model_list(dxtbx::ImageSetData&, boost::python::tuple, Func) [with Model = dxtbx::model::BeamBase; Func = void (dxtbx::ImageSetData::*)(const std::shared_ptr&, long unsigned int)]’: /<>/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:249:56: required from here /<>/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:231:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 231 | for (std::size_t i = 0; i < boost::python::len(models); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:235:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 235 | for (std::size_t i = 0; i < boost::python::len(indices); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/imageset_ext.cc: In instantiation of ‘static void dxtbx::boost_python::ImageSetDataPickleSuite::set_model_list(dxtbx::ImageSetData&, boost::python::tuple, Func) [with Model = dxtbx::model::Detector; Func = void (dxtbx::ImageSetData::*)(const std::shared_ptr&, long unsigned int)]’: /<>/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:253:56: required from here /<>/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:231:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 231 | for (std::size_t i = 0; i < boost::python::len(models); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:235:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 235 | for (std::size_t i = 0; i < boost::python::len(indices); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/imageset_ext.cc: In instantiation of ‘static void dxtbx::boost_python::ImageSetDataPickleSuite::set_model_list(dxtbx::ImageSetData&, boost::python::tuple, Func) [with Model = dxtbx::model::Goniometer; Func = void (dxtbx::ImageSetData::*)(const std::shared_ptr&, long unsigned int)]’: /<>/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:257:58: required from here /<>/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:231:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 231 | for (std::size_t i = 0; i < boost::python::len(models); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:235:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 235 | for (std::size_t i = 0; i < boost::python::len(indices); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/imageset_ext.cc: In instantiation of ‘static void dxtbx::boost_python::ImageSetDataPickleSuite::set_model_list(dxtbx::ImageSetData&, boost::python::tuple, Func) [with Model = dxtbx::model::Scan; Func = void (dxtbx::ImageSetData::*)(const std::shared_ptr&, long unsigned int)]’: /<>/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:261:52: required from here /<>/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:231:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 231 | for (std::size_t i = 0; i < boost::python::len(models); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:235:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 235 | for (std::size_t i = 0; i < boost::python::len(indices); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘std::shared_ptr > dxtbx::format::boost_python::make_image_from_tuple(boost::python::tuple) [with T = bool]’: /<>/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:125:40: required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = bool]’ /<>/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:141:24: required from here /<>/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:51:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 51 | for (std::size_t i = 0; i < boost::python::len(data); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘std::shared_ptr > dxtbx::format::boost_python::make_image_from_tuple(boost::python::tuple) [with T = int]’: /<>/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:125:40: required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = int]’ /<>/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:142:23: required from here /<>/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:51:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] /<>/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘std::shared_ptr > dxtbx::format::boost_python::make_image_from_tuple(boost::python::tuple) [with T = double]’: /<>/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:125:40: required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = double]’ /<>/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:143:26: required from here /<>/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:51:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] /<>/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘static void dxtbx::format::boost_python::ImagePickleSuite::setstate(dxtbx::format::Image&, boost::python::tuple) [with T = bool]’: /usr/include/boost/python/class.hpp:345:9: required from ‘boost::python::class_::self& boost::python::class_::def_pickle(const PickleSuiteType&) [with PickleSuiteType = dxtbx::format::boost_python::ImagePickleSuite; W = dxtbx::format::Image; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ /<>/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:134:18: required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = bool]’ /<>/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:141:24: required from here /<>/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:98:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 98 | for (std::size_t i = 0; i < boost::python::len(tile_list); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘static void dxtbx::format::boost_python::ImagePickleSuite::setstate(dxtbx::format::Image&, boost::python::tuple) [with T = int]’: /usr/include/boost/python/class.hpp:345:9: required from ‘boost::python::class_::self& boost::python::class_::def_pickle(const PickleSuiteType&) [with PickleSuiteType = dxtbx::format::boost_python::ImagePickleSuite; W = dxtbx::format::Image; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ /<>/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:134:18: required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = int]’ /<>/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:142:23: required from here /<>/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:98:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] /<>/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘static void dxtbx::format::boost_python::ImagePickleSuite::setstate(dxtbx::format::Image&, boost::python::tuple) [with T = double]’: /usr/include/boost/python/class.hpp:345:9: required from ‘boost::python::class_::self& boost::python::class_::def_pickle(const PickleSuiteType&) [with PickleSuiteType = dxtbx::format::boost_python::ImagePickleSuite; W = dxtbx::format::Image; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ /<>/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:134:18: required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = double]’ /<>/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:143:26: required from here /<>/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:98:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] g++ -o dxtbx/src/dxtbx/masking/boost_python/ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/<> -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -DBUILD_CBF -I/<> -I/<>/.pybuild/cpython3_3.12/base/include -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/dxtbx/src -I/usr/include/cbflib -I/<>/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /<>/dxtbx/src/dxtbx/masking/boost_python/ext.cc In file included from /<>/dxtbx/src/dxtbx/masking/masking.h:16, from /<>/dxtbx/src/dxtbx/masking/boost_python/ext.cc:3: /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:549:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 549 | vec3 direction_; | ^~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:91:5: warning: when initialized here [-Wreorder] 91 | Beam() | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:124:5: warning: when initialized here [-Wreorder] 124 | Beam(vec3 direction, double wavelength) | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:163:5: warning: when initialized here [-Wreorder] 163 | Beam(vec3 direction, | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:191:5: warning: when initialized here [-Wreorder] 191 | Beam(vec3 direction, | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:225:5: warning: when initialized here [-Wreorder] 225 | Beam(vec3 direction, | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /<>/dxtbx/src/dxtbx/model/beam.h:740:52: warning: left operand of comma operator has no effect [-Wunused-value] 740 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /<>/dxtbx/src/dxtbx/model/beam.h:740:60: warning: right operand of comma operator has no effect [-Wunused-value] 740 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /<>/dxtbx/src/dxtbx/model/panel.h:22, from /<>/dxtbx/src/dxtbx/masking/masking.h:17: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /<>/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /<>/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ /<>/dxtbx/src/dxtbx/masking/masking.h: In function ‘void dxtbx::masking::mask_untrusted_circle(scitbx::af::ref >, double, double, double)’: /<>/dxtbx/src/dxtbx/masking/masking.h:79:32: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 79 | for (std::size_t j = y0; j < y1; ++j) { | ~~^~~~ /<>/dxtbx/src/dxtbx/masking/masking.h:80:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 80 | for (std::size_t i = x0; i < x1; ++i) { | ~~^~~~ /<>/dxtbx/src/dxtbx/masking/masking.h: In function ‘void dxtbx::masking::mask_untrusted_polygon(scitbx::af::ref >, const scitbx::af::const_ref >&)’: /<>/dxtbx/src/dxtbx/masking/masking.h:143:32: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 143 | for (std::size_t j = y0; j < y1; ++j) { | ~~^~~~ /<>/dxtbx/src/dxtbx/masking/masking.h:144:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 144 | for (std::size_t i = x0; i < x1; ++i) { | ~~^~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/beam.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/<> -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -DBUILD_CBF -I/<> -I/<>/.pybuild/cpython3_3.12/base/include -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/dxtbx/src -I/usr/include/cbflib -I/<>/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /<>/dxtbx/src/dxtbx/model/boost_python/beam.cc In file included from /<>/dxtbx/src/dxtbx/model/boost_python/beam.cc:17: /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:549:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 549 | vec3 direction_; | ^~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:91:5: warning: when initialized here [-Wreorder] 91 | Beam() | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:124:5: warning: when initialized here [-Wreorder] 124 | Beam(vec3 direction, double wavelength) | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:163:5: warning: when initialized here [-Wreorder] 163 | Beam(vec3 direction, | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:191:5: warning: when initialized here [-Wreorder] 191 | Beam(vec3 direction, | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:225:5: warning: when initialized here [-Wreorder] 225 | Beam(vec3 direction, | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /<>/dxtbx/src/dxtbx/model/beam.h:740:52: warning: left operand of comma operator has no effect [-Wunused-value] 740 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /<>/dxtbx/src/dxtbx/model/beam.h:740:60: warning: right operand of comma operator has no effect [-Wunused-value] 740 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /<>/dxtbx/src/dxtbx/model/panel.h:22, from /<>/dxtbx/src/dxtbx/model/detector.h:25, from /<>/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:18, from /<>/dxtbx/src/dxtbx/model/boost_python/beam.cc:18: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /<>/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /<>/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /<>/dxtbx/src/dxtbx/model/scan.h:22, from /<>/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20: /<>/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /<>/dxtbx/src/dxtbx/model/scan_helpers.h:85:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 85 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan()’: /<>/dxtbx/src/dxtbx/model/scan.h:504:32: warning: ‘dxtbx::model::Scan::epochs_’ will be initialized after [-Wreorder] 504 | scitbx::af::shared epochs_; | ^~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:502:9: warning: ‘int dxtbx::model::Scan::batch_offset_’ [-Wreorder] 502 | int batch_offset_; | ^~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:39:5: warning: when initialized here [-Wreorder] 39 | Scan() | ^~~~ In file included from /<>/scitbx/error.h:16, from /<>/scitbx/array_family/ref.h:4, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/vec3.h:4, from /<>/dxtbx/src/dxtbx/model/beam.h:17: /<>/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, scitbx::vec2, const scitbx::af::shared&, const scitbx::af::shared&, int)’: /<>/dxtbx/src/dxtbx/model/scan.h:99:43: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 99 | DXTBX_ASSERT(exposure_times_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:99:7: note: in expansion of macro ‘DXTBX_ASSERT’ 99 | DXTBX_ASSERT(exposure_times_.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:100:35: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 100 | DXTBX_ASSERT(epochs_.size() == num_images_); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:100:7: note: in expansion of macro ‘DXTBX_ASSERT’ 100 | DXTBX_ASSERT(epochs_.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /<>/dxtbx/src/dxtbx/model/scan.h:231:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 231 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:231:7: note: in expansion of macro ‘DXTBX_ASSERT’ 231 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /<>/dxtbx/src/dxtbx/model/scan.h:237:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 237 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:237:7: note: in expansion of macro ‘DXTBX_ASSERT’ 237 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/boost_python/beam.cc: In function ‘void dxtbx::model::boost_python::beam_detail::Beam_set_s0_at_scan_points_from_tuple(dxtbx::model::Beam&, boost::python::tuple)’: /<>/dxtbx/src/dxtbx/model/boost_python/beam.cc:209:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 209 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/boost_python/beam.cc: In function ‘void dxtbx::model::boost_python::beam_detail::Beam_set_s0_at_scan_points_from_list(dxtbx::model::Beam&, boost::python::list)’: /<>/dxtbx/src/dxtbx/model/boost_python/beam.cc:219:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 219 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/crystal.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/<> -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -DBUILD_CBF -I/<> -I/<>/.pybuild/cpython3_3.12/base/include -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/dxtbx/src -I/usr/include/cbflib -I/<>/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /<>/dxtbx/src/dxtbx/model/boost_python/crystal.cc /<>/dxtbx/src/dxtbx/model/boost_python/crystal.cc: In function ‘void dxtbx::model::boost_python::Crystal_set_A_at_scan_points_from_tuple(dxtbx::model::CrystalBase&, boost::python::tuple)’: /<>/dxtbx/src/dxtbx/model/boost_python/crystal.cc:119:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 119 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/boost_python/crystal.cc: In function ‘void dxtbx::model::boost_python::Crystal_set_A_at_scan_points_from_list(dxtbx::model::CrystalBase&, boost::python::list)’: /<>/dxtbx/src/dxtbx/model/boost_python/crystal.cc:129:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 129 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/boost_python/crystal.cc: In function ‘void dxtbx::model::boost_python::Crystal_set_B_covariance_from_tuple(dxtbx::model::CrystalBase&, boost::python::api::object)’: /<>/dxtbx/src/dxtbx/model/boost_python/crystal.cc:141:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 141 | for (std::size_t i = 0; i < boost::python::len(obj); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/detector.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/<> -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -DBUILD_CBF -I/<> -I/<>/.pybuild/cpython3_3.12/base/include -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/dxtbx/src -I/usr/include/cbflib -I/<>/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /<>/dxtbx/src/dxtbx/model/boost_python/detector.cc g++ -o dxtbx/src/dxtbx/model/boost_python/experiment.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/<> -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -DBUILD_CBF -I/<> -I/<>/.pybuild/cpython3_3.12/base/include -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/dxtbx/src -I/usr/include/cbflib -I/<>/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /<>/dxtbx/src/dxtbx/model/boost_python/experiment.cc In file included from /<>/dxtbx/src/dxtbx/model/experiment.h:22, from /<>/dxtbx/src/dxtbx/model/boost_python/experiment.cc:17: /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:549:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 549 | vec3 direction_; | ^~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:91:5: warning: when initialized here [-Wreorder] 91 | Beam() | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:124:5: warning: when initialized here [-Wreorder] 124 | Beam(vec3 direction, double wavelength) | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:163:5: warning: when initialized here [-Wreorder] 163 | Beam(vec3 direction, | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:191:5: warning: when initialized here [-Wreorder] 191 | Beam(vec3 direction, | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:225:5: warning: when initialized here [-Wreorder] 225 | Beam(vec3 direction, | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /<>/dxtbx/src/dxtbx/model/beam.h:740:52: warning: left operand of comma operator has no effect [-Wunused-value] 740 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /<>/dxtbx/src/dxtbx/model/beam.h:740:60: warning: right operand of comma operator has no effect [-Wunused-value] 740 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /<>/dxtbx/src/dxtbx/model/panel.h:22, from /<>/dxtbx/src/dxtbx/model/detector.h:25, from /<>/dxtbx/src/dxtbx/model/experiment.h:23: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /<>/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /<>/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /<>/dxtbx/src/dxtbx/model/scan.h:22, from /<>/dxtbx/src/dxtbx/model/experiment.h:25: /<>/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /<>/dxtbx/src/dxtbx/model/scan_helpers.h:85:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 85 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan()’: /<>/dxtbx/src/dxtbx/model/scan.h:504:32: warning: ‘dxtbx::model::Scan::epochs_’ will be initialized after [-Wreorder] 504 | scitbx::af::shared epochs_; | ^~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:502:9: warning: ‘int dxtbx::model::Scan::batch_offset_’ [-Wreorder] 502 | int batch_offset_; | ^~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:39:5: warning: when initialized here [-Wreorder] 39 | Scan() | ^~~~ In file included from /<>/scitbx/error.h:16, from /<>/scitbx/array_family/ref.h:4, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/vec3.h:4, from /<>/dxtbx/src/dxtbx/model/experiment.h:19: /<>/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, scitbx::vec2, const scitbx::af::shared&, const scitbx::af::shared&, int)’: /<>/dxtbx/src/dxtbx/model/scan.h:99:43: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 99 | DXTBX_ASSERT(exposure_times_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:99:7: note: in expansion of macro ‘DXTBX_ASSERT’ 99 | DXTBX_ASSERT(exposure_times_.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:100:35: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 100 | DXTBX_ASSERT(epochs_.size() == num_images_); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:100:7: note: in expansion of macro ‘DXTBX_ASSERT’ 100 | DXTBX_ASSERT(epochs_.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /<>/dxtbx/src/dxtbx/model/scan.h:231:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 231 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:231:7: note: in expansion of macro ‘DXTBX_ASSERT’ 231 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /<>/dxtbx/src/dxtbx/model/scan.h:237:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 237 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:237:7: note: in expansion of macro ‘DXTBX_ASSERT’ 237 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ In file included from /<>/dxtbx/src/dxtbx/model/panel.h:22, from /<>/dxtbx/src/dxtbx/model/detector.h:25, from /<>/dxtbx/src/dxtbx/model/boost_python/detector.cc:22: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /<>/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /<>/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /<>/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16, from /<>/dxtbx/src/dxtbx/model/boost_python/detector.cc:23: /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:549:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 549 | vec3 direction_; | ^~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:91:5: warning: when initialized here [-Wreorder] 91 | Beam() | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:124:5: warning: when initialized here [-Wreorder] 124 | Beam(vec3 direction, double wavelength) | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:163:5: warning: when initialized here [-Wreorder] 163 | Beam(vec3 direction, | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:191:5: warning: when initialized here [-Wreorder] 191 | Beam(vec3 direction, | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:225:5: warning: when initialized here [-Wreorder] 225 | Beam(vec3 direction, | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /<>/dxtbx/src/dxtbx/model/beam.h:740:52: warning: left operand of comma operator has no effect [-Wunused-value] 740 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /<>/dxtbx/src/dxtbx/model/beam.h:740:60: warning: right operand of comma operator has no effect [-Wunused-value] 740 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /<>/dxtbx/src/dxtbx/model/scan.h:22, from /<>/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20: /<>/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /<>/dxtbx/src/dxtbx/model/scan_helpers.h:85:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 85 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan()’: /<>/dxtbx/src/dxtbx/model/scan.h:504:32: warning: ‘dxtbx::model::Scan::epochs_’ will be initialized after [-Wreorder] 504 | scitbx::af::shared epochs_; | ^~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:502:9: warning: ‘int dxtbx::model::Scan::batch_offset_’ [-Wreorder] 502 | int batch_offset_; | ^~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:39:5: warning: when initialized here [-Wreorder] 39 | Scan() | ^~~~ In file included from /<>/scitbx/error.h:16, from /<>/scitbx/array_family/accessors/flex_grid.h:4, from /<>/scitbx/array_family/flex_types.h:6, from /<>/scitbx/array_family/boost_python/flex_wrapper.h:15, from /<>/dxtbx/src/dxtbx/model/boost_python/detector.cc:18: /<>/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, scitbx::vec2, const scitbx::af::shared&, const scitbx::af::shared&, int)’: /<>/dxtbx/src/dxtbx/model/scan.h:99:43: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 99 | DXTBX_ASSERT(exposure_times_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:99:7: note: in expansion of macro ‘DXTBX_ASSERT’ 99 | DXTBX_ASSERT(exposure_times_.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:100:35: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 100 | DXTBX_ASSERT(epochs_.size() == num_images_); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:100:7: note: in expansion of macro ‘DXTBX_ASSERT’ 100 | DXTBX_ASSERT(epochs_.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /<>/dxtbx/src/dxtbx/model/scan.h:231:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 231 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:231:7: note: in expansion of macro ‘DXTBX_ASSERT’ 231 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /<>/dxtbx/src/dxtbx/model/scan.h:237:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 237 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:237:7: note: in expansion of macro ‘DXTBX_ASSERT’ 237 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/boost_python/detector.cc: In function ‘void dxtbx::model::boost_python::detector_detail::node_from_dict(boost::python::dict, dxtbx::model::Detector::Node*, boost::python::list, scitbx::af::ref)’: /<>/dxtbx/src/dxtbx/model/boost_python/detector.cc:88:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 88 | DXTBX_ASSERT(used.size() == boost::python::len(panels)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/boost_python/detector.cc:88:9: note: in expansion of macro ‘DXTBX_ASSERT’ 88 | DXTBX_ASSERT(used.size() == boost::python::len(panels)); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/boost_python/detector.cc:89:26: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 89 | DXTBX_ASSERT(idx < boost::python::len(panels)); | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/boost_python/detector.cc:89:9: note: in expansion of macro ‘DXTBX_ASSERT’ 89 | DXTBX_ASSERT(idx < boost::python::len(panels)); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/boost_python/detector.cc:100:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 100 | for (std::size_t i = 0; i < boost::python::len(obj["children"]); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/boost_python/detector.cc: In function ‘dxtbx::model::Detector* dxtbx::model::boost_python::detector_detail::detector_from_dict(dxtbx::model::Detector*, boost::python::dict)’: /<>/dxtbx/src/dxtbx/model/boost_python/detector.cc:124:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 124 | for (std::size_t i = 0; i < boost::python::len(hierarchy["children"]); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/boost_python/detector.cc:134:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 134 | for (std::size_t i = 0; i < boost::python::len(panels); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/boost_python/detector.cc: In function ‘dxtbx::model::Detector* dxtbx::model::boost_python::detector_detail::detector_from_dict(dxtbx::model::Detector*, boost::python::dict, const dxtbx::format::Image&, const dxtbx::format::Image&)’: /<>/dxtbx/src/dxtbx/model/boost_python/detector.cc:158:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 158 | for (std::size_t i = 0; i < boost::python::len(hierarchy["children"]); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/boost_python/detector.cc:168:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 168 | for (std::size_t i = 0; i < boost::python::len(panels); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/boost_python/detector.cc: In static member function ‘static void dxtbx::model::boost_python::detector_detail::DetectorPickleSuite::copy_node(dxtbx::model::Detector::Node::pointer, boost::python::dict, boost::python::list)’: /<>/dxtbx/src/dxtbx/model/boost_python/detector.cc:228:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 228 | for (std::size_t i = 0; i < boost::python::len(node["children"]); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/experiment_list.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/<> -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -DBUILD_CBF -I/<> -I/<>/.pybuild/cpython3_3.12/base/include -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/dxtbx/src -I/usr/include/cbflib -I/<>/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /<>/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc In file included from /<>/dxtbx/src/dxtbx/model/experiment.h:22, from /<>/dxtbx/src/dxtbx/model/experiment_list.h:23, from /<>/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:20: /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:549:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 549 | vec3 direction_; | ^~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:91:5: warning: when initialized here [-Wreorder] 91 | Beam() | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:124:5: warning: when initialized here [-Wreorder] 124 | Beam(vec3 direction, double wavelength) | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:163:5: warning: when initialized here [-Wreorder] 163 | Beam(vec3 direction, | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:191:5: warning: when initialized here [-Wreorder] 191 | Beam(vec3 direction, | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:225:5: warning: when initialized here [-Wreorder] 225 | Beam(vec3 direction, | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /<>/dxtbx/src/dxtbx/model/beam.h:740:52: warning: left operand of comma operator has no effect [-Wunused-value] 740 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /<>/dxtbx/src/dxtbx/model/beam.h:740:60: warning: right operand of comma operator has no effect [-Wunused-value] 740 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /<>/dxtbx/src/dxtbx/model/panel.h:22, from /<>/dxtbx/src/dxtbx/model/detector.h:25, from /<>/dxtbx/src/dxtbx/model/experiment.h:23: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /<>/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /<>/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /<>/dxtbx/src/dxtbx/model/scan.h:22, from /<>/dxtbx/src/dxtbx/model/experiment.h:25: /<>/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /<>/dxtbx/src/dxtbx/model/scan_helpers.h:85:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 85 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan()’: /<>/dxtbx/src/dxtbx/model/scan.h:504:32: warning: ‘dxtbx::model::Scan::epochs_’ will be initialized after [-Wreorder] 504 | scitbx::af::shared epochs_; | ^~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:502:9: warning: ‘int dxtbx::model::Scan::batch_offset_’ [-Wreorder] 502 | int batch_offset_; | ^~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:39:5: warning: when initialized here [-Wreorder] 39 | Scan() | ^~~~ In file included from /<>/scitbx/error.h:16, from /<>/scitbx/array_family/ref.h:4, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/vec3.h:4, from /<>/dxtbx/src/dxtbx/model/experiment_list.h:20: /<>/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, scitbx::vec2, const scitbx::af::shared&, const scitbx::af::shared&, int)’: /<>/dxtbx/src/dxtbx/model/scan.h:99:43: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 99 | DXTBX_ASSERT(exposure_times_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:99:7: note: in expansion of macro ‘DXTBX_ASSERT’ 99 | DXTBX_ASSERT(exposure_times_.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:100:35: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 100 | DXTBX_ASSERT(epochs_.size() == num_images_); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:100:7: note: in expansion of macro ‘DXTBX_ASSERT’ 100 | DXTBX_ASSERT(epochs_.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /<>/dxtbx/src/dxtbx/model/scan.h:231:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 231 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:231:7: note: in expansion of macro ‘DXTBX_ASSERT’ 231 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /<>/dxtbx/src/dxtbx/model/scan.h:237:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 237 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:237:7: note: in expansion of macro ‘DXTBX_ASSERT’ 237 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘dxtbx::model::ExperimentList* dxtbx::model::boost_python::make_experiment_list(boost::python::api::object)’: /<>/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:30:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 30 | for (std::size_t i = 0; i < boost::python::len(items); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘void dxtbx::model::boost_python::experiment_list_setitem(dxtbx::model::ExperimentList&, int, dxtbx::model::Experiment)’: /<>/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:174:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 174 | if (n >= self.size() || n < 0) { | ~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘dxtbx::model::Experiment& dxtbx::model::boost_python::experiment_list_getitem(dxtbx::model::ExperimentList&, int)’: /<>/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:184:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 184 | if (n >= self.size() || n < 0) { | ~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘dxtbx::model::ExperimentList dxtbx::model::boost_python::experiment_list_getitem_slice(const dxtbx::model::ExperimentList&, boost::python::slice)’: /<>/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:193:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 193 | for (std::size_t i = as.start; i < as.stop && i < self.size(); i += as.step) { | ~~^~~~~~~~~ /<>/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘void dxtbx::model::boost_python::experiment_list_delitem(dxtbx::model::ExperimentList&, int)’: /<>/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:203:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 203 | if (n >= self.size() || n < 0) { | ~~^~~~~~~~~~~~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/goniometer.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/<> -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -DBUILD_CBF -I/<> -I/<>/.pybuild/cpython3_3.12/base/include -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/dxtbx/src -I/usr/include/cbflib -I/<>/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /<>/dxtbx/src/dxtbx/model/boost_python/goniometer.cc g++ -o dxtbx/src/dxtbx/model/boost_python/kappa_goniometer.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/<> -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -DBUILD_CBF -I/<> -I/<>/.pybuild/cpython3_3.12/base/include -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/dxtbx/src -I/usr/include/cbflib -I/<>/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /<>/dxtbx/src/dxtbx/model/boost_python/kappa_goniometer.cc In file included from /<>/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16, from /<>/dxtbx/src/dxtbx/model/boost_python/goniometer.cc:20: /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:549:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 549 | vec3 direction_; | ^~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:91:5: warning: when initialized here [-Wreorder] 91 | Beam() | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:124:5: warning: when initialized here [-Wreorder] 124 | Beam(vec3 direction, double wavelength) | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:163:5: warning: when initialized here [-Wreorder] 163 | Beam(vec3 direction, | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:191:5: warning: when initialized here [-Wreorder] 191 | Beam(vec3 direction, | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:225:5: warning: when initialized here [-Wreorder] 225 | Beam(vec3 direction, | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /<>/dxtbx/src/dxtbx/model/beam.h:740:52: warning: left operand of comma operator has no effect [-Wunused-value] 740 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /<>/dxtbx/src/dxtbx/model/beam.h:740:60: warning: right operand of comma operator has no effect [-Wunused-value] 740 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /<>/dxtbx/src/dxtbx/model/panel.h:22, from /<>/dxtbx/src/dxtbx/model/detector.h:25, from /<>/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:18: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /<>/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /<>/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /<>/dxtbx/src/dxtbx/model/scan.h:22, from /<>/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20: /<>/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /<>/dxtbx/src/dxtbx/model/scan_helpers.h:85:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 85 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan()’: /<>/dxtbx/src/dxtbx/model/scan.h:504:32: warning: ‘dxtbx::model::Scan::epochs_’ will be initialized after [-Wreorder] 504 | scitbx::af::shared epochs_; | ^~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:502:9: warning: ‘int dxtbx::model::Scan::batch_offset_’ [-Wreorder] 502 | int batch_offset_; | ^~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:39:5: warning: when initialized here [-Wreorder] 39 | Scan() | ^~~~ In file included from /<>/scitbx/error.h:16, from /<>/scitbx/array_family/ref.h:4, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/vec3.h:4, from /<>/dxtbx/src/dxtbx/model/goniometer.h:15, from /<>/dxtbx/src/dxtbx/model/boost_python/goniometer.cc:17: /<>/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, scitbx::vec2, const scitbx::af::shared&, const scitbx::af::shared&, int)’: /<>/dxtbx/src/dxtbx/model/scan.h:99:43: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 99 | DXTBX_ASSERT(exposure_times_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:99:7: note: in expansion of macro ‘DXTBX_ASSERT’ 99 | DXTBX_ASSERT(exposure_times_.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:100:35: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 100 | DXTBX_ASSERT(epochs_.size() == num_images_); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:100:7: note: in expansion of macro ‘DXTBX_ASSERT’ 100 | DXTBX_ASSERT(epochs_.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /<>/dxtbx/src/dxtbx/model/scan.h:231:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 231 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:231:7: note: in expansion of macro ‘DXTBX_ASSERT’ 231 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /<>/dxtbx/src/dxtbx/model/scan.h:237:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 237 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:237:7: note: in expansion of macro ‘DXTBX_ASSERT’ 237 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/boost_python/goniometer.cc: In function ‘void dxtbx::model::boost_python::goniometer_detail::Goniometer_set_S_at_scan_points_from_tuple(dxtbx::model::Goniometer&, boost::python::tuple)’: /<>/dxtbx/src/dxtbx/model/boost_python/goniometer.cc:79:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 79 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/boost_python/goniometer.cc: In function ‘void dxtbx::model::boost_python::goniometer_detail::Goniometer_set_S_at_scan_points_from_list(dxtbx::model::Goniometer&, boost::python::list)’: /<>/dxtbx/src/dxtbx/model/boost_python/goniometer.cc:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 89 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/model_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/<> -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -DBUILD_CBF -I/<> -I/<>/.pybuild/cpython3_3.12/base/include -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/dxtbx/src -I/usr/include/cbflib -I/<>/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /<>/dxtbx/src/dxtbx/model/boost_python/model_ext.cc g++ -o dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/<> -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -DBUILD_CBF -I/<> -I/<>/.pybuild/cpython3_3.12/base/include -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/dxtbx/src -I/usr/include/cbflib -I/<>/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /<>/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc g++ -o dxtbx/src/dxtbx/model/boost_python/panel.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/<> -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -DBUILD_CBF -I/<> -I/<>/.pybuild/cpython3_3.12/base/include -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/dxtbx/src -I/usr/include/cbflib -I/<>/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /<>/dxtbx/src/dxtbx/model/boost_python/panel.cc g++ -o dxtbx/src/dxtbx/model/boost_python/parallax_correction.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/<> -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -DBUILD_CBF -I/<> -I/<>/.pybuild/cpython3_3.12/base/include -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/dxtbx/src -I/usr/include/cbflib -I/<>/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /<>/dxtbx/src/dxtbx/model/boost_python/parallax_correction.cc g++ -o dxtbx/src/dxtbx/model/boost_python/pixel_to_millimeter.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/<> -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -DBUILD_CBF -I/<> -I/<>/.pybuild/cpython3_3.12/base/include -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/dxtbx/src -I/usr/include/cbflib -I/<>/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /<>/dxtbx/src/dxtbx/model/boost_python/pixel_to_millimeter.cc In file included from /<>/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16, from /<>/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc:18: /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:549:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 549 | vec3 direction_; | ^~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:91:5: warning: when initialized here [-Wreorder] 91 | Beam() | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:124:5: warning: when initialized here [-Wreorder] 124 | Beam(vec3 direction, double wavelength) | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:163:5: warning: when initialized here [-Wreorder] 163 | Beam(vec3 direction, | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:191:5: warning: when initialized here [-Wreorder] 191 | Beam(vec3 direction, | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:225:5: warning: when initialized here [-Wreorder] 225 | Beam(vec3 direction, | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /<>/dxtbx/src/dxtbx/model/beam.h:740:52: warning: left operand of comma operator has no effect [-Wunused-value] 740 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /<>/dxtbx/src/dxtbx/model/beam.h:740:60: warning: right operand of comma operator has no effect [-Wunused-value] 740 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /<>/dxtbx/src/dxtbx/model/panel.h:22, from /<>/dxtbx/src/dxtbx/model/detector.h:25, from /<>/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:18: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; In file included from /<>/dxtbx/src/dxtbx/model/panel.h:22, from /<>/dxtbx/src/dxtbx/model/boost_python/panel.cc:20: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /<>/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /<>/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ /<>/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /<>/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /<>/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /<>/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16, from /<>/dxtbx/src/dxtbx/model/boost_python/panel.cc:21: /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:549:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 549 | vec3 direction_; | ^~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:91:5: warning: when initialized here [-Wreorder] 91 | Beam() | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:124:5: warning: when initialized here [-Wreorder] 124 | Beam(vec3 direction, double wavelength) | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:163:5: warning: when initialized here [-Wreorder] 163 | Beam(vec3 direction, | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:191:5: warning: when initialized here [-Wreorder] 191 | Beam(vec3 direction, | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:225:5: warning: when initialized here [-Wreorder] 225 | Beam(vec3 direction, | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /<>/dxtbx/src/dxtbx/model/beam.h:740:52: warning: left operand of comma operator has no effect [-Wunused-value] 740 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /<>/dxtbx/src/dxtbx/model/beam.h:740:60: warning: right operand of comma operator has no effect [-Wunused-value] 740 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /<>/dxtbx/src/dxtbx/model/scan.h:22, from /<>/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20: /<>/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /<>/dxtbx/src/dxtbx/model/scan_helpers.h:85:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 85 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan()’: /<>/dxtbx/src/dxtbx/model/scan.h:504:32: warning: ‘dxtbx::model::Scan::epochs_’ will be initialized after [-Wreorder] 504 | scitbx::af::shared epochs_; | ^~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:502:9: warning: ‘int dxtbx::model::Scan::batch_offset_’ [-Wreorder] 502 | int batch_offset_; | ^~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:39:5: warning: when initialized here [-Wreorder] 39 | Scan() | ^~~~ In file included from /<>/scitbx/error.h:16, from /<>/scitbx/array_family/ref.h:4, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/vec3.h:4, from /<>/dxtbx/src/dxtbx/model/goniometer.h:15, from /<>/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc:16: /<>/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, scitbx::vec2, const scitbx::af::shared&, const scitbx::af::shared&, int)’: /<>/dxtbx/src/dxtbx/model/scan.h:99:43: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 99 | DXTBX_ASSERT(exposure_times_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:99:7: note: in expansion of macro ‘DXTBX_ASSERT’ 99 | DXTBX_ASSERT(exposure_times_.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:100:35: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 100 | DXTBX_ASSERT(epochs_.size() == num_images_); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:100:7: note: in expansion of macro ‘DXTBX_ASSERT’ 100 | DXTBX_ASSERT(epochs_.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /<>/dxtbx/src/dxtbx/model/scan.h:231:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 231 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:231:7: note: in expansion of macro ‘DXTBX_ASSERT’ 231 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /<>/dxtbx/src/dxtbx/model/scan.h:237:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 237 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:237:7: note: in expansion of macro ‘DXTBX_ASSERT’ 237 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ In file included from /<>/dxtbx/src/dxtbx/model/scan.h:22, from /<>/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20: /<>/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /<>/dxtbx/src/dxtbx/model/scan_helpers.h:85:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 85 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan()’: /<>/dxtbx/src/dxtbx/model/scan.h:504:32: warning: ‘dxtbx::model::Scan::epochs_’ will be initialized after [-Wreorder] 504 | scitbx::af::shared epochs_; | ^~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:502:9: warning: ‘int dxtbx::model::Scan::batch_offset_’ [-Wreorder] 502 | int batch_offset_; | ^~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:39:5: warning: when initialized here [-Wreorder] 39 | Scan() | ^~~~ In file included from /<>/scitbx/error.h:16, from /<>/scitbx/array_family/accessors/flex_grid.h:4, from /<>/scitbx/array_family/flex_types.h:6, from /<>/scitbx/array_family/boost_python/flex_wrapper.h:15, from /<>/dxtbx/src/dxtbx/model/boost_python/panel.cc:18: /<>/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, scitbx::vec2, const scitbx::af::shared&, const scitbx::af::shared&, int)’: /<>/dxtbx/src/dxtbx/model/scan.h:99:43: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 99 | DXTBX_ASSERT(exposure_times_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:99:7: note: in expansion of macro ‘DXTBX_ASSERT’ 99 | DXTBX_ASSERT(exposure_times_.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:100:35: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 100 | DXTBX_ASSERT(epochs_.size() == num_images_); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:100:7: note: in expansion of macro ‘DXTBX_ASSERT’ 100 | DXTBX_ASSERT(epochs_.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /<>/dxtbx/src/dxtbx/model/scan.h:231:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 231 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:231:7: note: in expansion of macro ‘DXTBX_ASSERT’ 231 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /<>/dxtbx/src/dxtbx/model/scan.h:237:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 237 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:237:7: note: in expansion of macro ‘DXTBX_ASSERT’ 237 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc: In function ‘T* dxtbx::model::boost_python::from_dict(boost::python::dict) [with T = dxtbx::model::MultiAxisGoniometer]’: /<>/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc:105:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 105 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/scan.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/<> -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -DBUILD_CBF -I/<> -I/<>/.pybuild/cpython3_3.12/base/include -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/dxtbx/src -I/usr/include/cbflib -I/<>/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /<>/dxtbx/src/dxtbx/model/boost_python/scan.cc In file included from /<>/dxtbx/src/dxtbx/model/panel.h:22, from /<>/dxtbx/src/dxtbx/model/boost_python/pixel_to_millimeter.cc:14: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /<>/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /<>/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /<>/dxtbx/src/dxtbx/model/scan.h:22, from /<>/dxtbx/src/dxtbx/model/boost_python/scan.cc:19: /<>/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /<>/dxtbx/src/dxtbx/model/scan_helpers.h:85:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 85 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan()’: /<>/dxtbx/src/dxtbx/model/scan.h:504:32: warning: ‘dxtbx::model::Scan::epochs_’ will be initialized after [-Wreorder] 504 | scitbx::af::shared epochs_; | ^~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:502:9: warning: ‘int dxtbx::model::Scan::batch_offset_’ [-Wreorder] 502 | int batch_offset_; | ^~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:39:5: warning: when initialized here [-Wreorder] 39 | Scan() | ^~~~ In file included from /<>/scitbx/error.h:16, from /<>/scitbx/array_family/ref.h:4, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/vec2.h:4, from /<>/dxtbx/src/dxtbx/model/scan.h:17: /<>/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, scitbx::vec2, const scitbx::af::shared&, const scitbx::af::shared&, int)’: /<>/dxtbx/src/dxtbx/model/scan.h:99:43: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 99 | DXTBX_ASSERT(exposure_times_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:99:7: note: in expansion of macro ‘DXTBX_ASSERT’ 99 | DXTBX_ASSERT(exposure_times_.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:100:35: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 100 | DXTBX_ASSERT(epochs_.size() == num_images_); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:100:7: note: in expansion of macro ‘DXTBX_ASSERT’ 100 | DXTBX_ASSERT(epochs_.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /<>/dxtbx/src/dxtbx/model/scan.h:231:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 231 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:231:7: note: in expansion of macro ‘DXTBX_ASSERT’ 231 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /<>/dxtbx/src/dxtbx/model/scan.h:237:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 237 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:237:7: note: in expansion of macro ‘DXTBX_ASSERT’ 237 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ In file included from /<>/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16, from /<>/dxtbx/src/dxtbx/model/boost_python/scan.cc:20: /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:549:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 549 | vec3 direction_; | ^~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:91:5: warning: when initialized here [-Wreorder] 91 | Beam() | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:124:5: warning: when initialized here [-Wreorder] 124 | Beam(vec3 direction, double wavelength) | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:163:5: warning: when initialized here [-Wreorder] 163 | Beam(vec3 direction, | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:191:5: warning: when initialized here [-Wreorder] 191 | Beam(vec3 direction, | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:225:5: warning: when initialized here [-Wreorder] 225 | Beam(vec3 direction, | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /<>/dxtbx/src/dxtbx/model/beam.h:740:52: warning: left operand of comma operator has no effect [-Wunused-value] 740 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /<>/dxtbx/src/dxtbx/model/beam.h:740:60: warning: right operand of comma operator has no effect [-Wunused-value] 740 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /<>/dxtbx/src/dxtbx/model/panel.h:22, from /<>/dxtbx/src/dxtbx/model/detector.h:25, from /<>/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:18: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /<>/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /<>/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ /<>/dxtbx/src/dxtbx/model/boost_python/scan.cc: In function ‘boost::python::dict dxtbx::model::boost_python::MaptoPythonDict(dxtbx::model::ExpImgRangeMap)’: /<>/dxtbx/src/dxtbx/model/boost_python/scan.cc:62:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 62 | for (int k = 0; k < val.size(); ++k) { | ~~^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/boost_python/scan.cc: In function ‘boost::python::list dxtbx::model::boost_python::get_valid_image_ranges(dxtbx::model::Scan&, std::string)’: /<>/dxtbx/src/dxtbx/model/boost_python/scan.cc:191:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 191 | for (int k = 0; k < ranges.size(); ++k) { | ~~^~~~~~~~~~~~~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/scan_helpers.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/<> -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -DBUILD_CBF -I/<> -I/<>/.pybuild/cpython3_3.12/base/include -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/dxtbx/src -I/usr/include/cbflib -I/<>/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /<>/dxtbx/src/dxtbx/model/boost_python/scan_helpers.cc g++ -o dxtbx/src/dxtbx/model/boost_python/spectrum.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/<> -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -DBUILD_CBF -I/<> -I/<>/.pybuild/cpython3_3.12/base/include -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/dxtbx/src -I/usr/include/cbflib -I/<>/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /<>/dxtbx/src/dxtbx/model/boost_python/spectrum.cc In file included from /<>/dxtbx/src/dxtbx/model/boost_python/scan_helpers.cc:16: /<>/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /<>/dxtbx/src/dxtbx/model/scan_helpers.h:85:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 85 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ g++ -o lib/libcbf-private.so.0.0.1 -shared -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libcbf-private.so.0 cbflib_adaptbx/detectors/mar_adaptor.o cbflib_adaptbx/detectors/cbf_adaptor.o cbflib_adaptbx/detectors/cbf_byte_offset_optimized.o cbflib_adaptbx/detectors/buffer_based_service.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -L/usr/lib/s390x-linux-gnu/hdf5/serial -lboost_thread -lboost_system -lhdf5 -lcbf Create symlinks for: 'lib/libcbf-private.so.0.0.1' 'lib/libcbf-private.so.0'->'lib/libcbf-private.so.0.0.1' 'lib/libcbf-private.so'->'lib/libcbf-private.so.0.0.1' g++ -o exe_dev/cbflib.tst_memory -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cbflib_adaptbx/detectors/tst_memory.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -L/usr/lib/s390x-linux-gnu/hdf5/serial -lcbf -lcbf-private -lm -lhdf5 In file included from /<>/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16, from /<>/dxtbx/src/dxtbx/model/boost_python/spectrum.cc:10: /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:549:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 549 | vec3 direction_; | ^~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:91:5: warning: when initialized here [-Wreorder] 91 | Beam() | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:124:5: warning: when initialized here [-Wreorder] 124 | Beam(vec3 direction, double wavelength) | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:163:5: warning: when initialized here [-Wreorder] 163 | Beam(vec3 direction, | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:191:5: warning: when initialized here [-Wreorder] 191 | Beam(vec3 direction, | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /<>/dxtbx/src/dxtbx/model/beam.h:560:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 560 | double wavelength_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:550:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 550 | double divergence_; | ^~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/beam.h:225:5: warning: when initialized here [-Wreorder] 225 | Beam(vec3 direction, | ^~~~ /<>/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /<>/dxtbx/src/dxtbx/model/beam.h:740:52: warning: left operand of comma operator has no effect [-Wunused-value] 740 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /<>/dxtbx/src/dxtbx/model/beam.h:740:60: warning: right operand of comma operator has no effect [-Wunused-value] 740 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /<>/dxtbx/src/dxtbx/model/panel.h:22, from /<>/dxtbx/src/dxtbx/model/detector.h:25, from /<>/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:18: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /<>/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /<>/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ g++ -o exe_dev/cctbx.convert_ccp4_symop_lib -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/convert_ccp4_symop_lib.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm In file included from /<>/dxtbx/src/dxtbx/model/scan.h:22, from /<>/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20: /<>/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /<>/dxtbx/src/dxtbx/model/scan_helpers.h:85:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 85 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan()’: /<>/dxtbx/src/dxtbx/model/scan.h:504:32: warning: ‘dxtbx::model::Scan::epochs_’ will be initialized after [-Wreorder] 504 | scitbx::af::shared epochs_; | ^~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:502:9: warning: ‘int dxtbx::model::Scan::batch_offset_’ [-Wreorder] 502 | int batch_offset_; | ^~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:39:5: warning: when initialized here [-Wreorder] 39 | Scan() | ^~~~ In file included from /<>/scitbx/error.h:16, from /<>/scitbx/array_family/ref.h:4, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/array_family/shared_plain.h:31, from /<>/scitbx/array_family/shared.h:4, from /<>/dxtbx/src/dxtbx/model/spectrum.h:9, from /<>/dxtbx/src/dxtbx/model/boost_python/spectrum.cc:9: /<>/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, scitbx::vec2, const scitbx::af::shared&, const scitbx::af::shared&, int)’: /<>/dxtbx/src/dxtbx/model/scan.h:99:43: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 99 | DXTBX_ASSERT(exposure_times_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:99:7: note: in expansion of macro ‘DXTBX_ASSERT’ 99 | DXTBX_ASSERT(exposure_times_.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:100:35: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 100 | DXTBX_ASSERT(epochs_.size() == num_images_); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:100:7: note: in expansion of macro ‘DXTBX_ASSERT’ 100 | DXTBX_ASSERT(epochs_.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /<>/dxtbx/src/dxtbx/model/scan.h:231:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 231 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:231:7: note: in expansion of macro ‘DXTBX_ASSERT’ 231 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /<>/dxtbx/src/dxtbx/model/scan.h:237:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 237 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/dxtbx/src/dxtbx/model/scan.h:237:7: note: in expansion of macro ‘DXTBX_ASSERT’ 237 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ g++ -o exe_dev/cctbx.find_distances -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/find_distances.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm g++ -o exe_dev/cctbx.getting_started -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/getting_started.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm g++ -o exe_dev/cctbx.lattice_symmetry -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/lattice_symmetry.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm g++ -o exe_dev/cctbx.sym_equiv_sites -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/sym_equiv_sites.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm g++ -o exe_dev/cctbx.sys_abs_equiv_space_groups -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/sys_abs_equiv_space_groups.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm g++ -o fable/ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<>/fable -I/<> -I/usr/include -I/usr/include/python3.12 /<>/fable/ext.cpp g++ -o gltbx/font_ucs_10x20.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 gltbx/font_ucs_10x20.cpp g++ -o gltbx/font_ucs_8x13.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 gltbx/font_ucs_8x13.cpp g++ -o gltbx/font_ucs_9x15.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 gltbx/font_ucs_9x15.cpp g++ -o gltbx/fonts_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/gltbx/fonts_ext.cpp g++ -o gltbx/gl_defines_00_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 gltbx/gl_defines_00_bpl.cpp In file included from /<>/fable/ext.cpp:5: /<>/fable/fem/utils/equivalence.hpp: In member function ‘void fem::utils::equivalence::array_alignment::infer_diffs0_from_diff_matrix()’: /<>/fable/fem/utils/equivalence.hpp:93:28: warning: comparison of integer expressions of different signedness: ‘const fem::ssize_t’ {aka ‘const long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 93 | if (c0e[0] == i0) { | ~~~~~~~^~~~~ In file included from /<>/fable/fem/utils/string_to_double.hpp:5, from /<>/fable/fem/utils/string_to_double_fmt.hpp:4, from /<>/fable/ext.cpp:6: /<>/fable/fem/utils/simple_streams.hpp: In member function ‘virtual void fem::utils::simple_ostream_to_char_ptr_and_size::put(char)’: /<>/fable/fem/utils/simple_streams.hpp:63:13: warning: comparison of integer expressions of different signedness: ‘fem::ssize_t’ {aka ‘long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 63 | if (i < sz) s[i++] = c; | ~~^~~~ /<>/fable/fem/utils/string_to_double.hpp: In member function ‘void fem::utils::string_to_double::convert(fem::utils::simple_istream&, unsigned int, int)’: /<>/fable/fem/utils/string_to_double.hpp:115:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 115 | if (dexp <= ad_hoc_limits::max_digit_count) { | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/fable/fem/utils/string.hpp:6, from /<>/fable/fem/str_ref.hpp:5, from /<>/fable/fem/format.hpp:5, from /<>/fable/ext.cpp:4: /<>/fable/ext.cpp: In function ‘unsigned int fable::ext::get_code_stop(const boost::python::api::object&, int)’: /<>/fable/ext.cpp:24:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 24 | TBXX_ASSERT(stop <= len_code); | ~~~~~^~~~~~~~~~~ /<>/tbxx/error_utils.hpp:59:9: note: in definition of macro ‘TBXX_ASSERT’ 59 | if (!(condition)) { \ | ^~~~~~~~~ /<>/fable/ext.cpp: In function ‘int fable::ext::floating_point_scan_after_dot(const boost::python::api::object&, unsigned int, int)’: /<>/fable/ext.cpp:71:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 71 | if (i < code_stop) { | ~~^~~~~~~~~~~ g++ -o gltbx/gl_defines_01_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 gltbx/gl_defines_01_bpl.cpp g++ -o gltbx/gl_defines_02_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 gltbx/gl_defines_02_bpl.cpp g++ -o gltbx/gl_defines_03_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 gltbx/gl_defines_03_bpl.cpp g++ -o gltbx/gl_defines_04_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 gltbx/gl_defines_04_bpl.cpp g++ -o gltbx/gl_defines_05_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 gltbx/gl_defines_05_bpl.cpp g++ -o gltbx/gl_defines_06_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 gltbx/gl_defines_06_bpl.cpp g++ -o gltbx/gl_defines_07_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 gltbx/gl_defines_07_bpl.cpp g++ -o gltbx/gl_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/gltbx/gl_ext.cpp g++ -o gltbx/gl_functions_00_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_00_bpl.cpp g++ -o gltbx/gl_functions_01_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_01_bpl.cpp 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-ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 gltbx/glu_defines_00_bpl.cpp g++ -o gltbx/glu_defines_01_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 gltbx/glu_defines_01_bpl.cpp g++ -o gltbx/glu_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/gltbx/glu_ext.cpp g++ -o gltbx/glu_functions_00_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 gltbx/glu_functions_00_bpl.cpp g++ -o gltbx/glu_functions_01_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 gltbx/glu_functions_01_bpl.cpp g++ -o gltbx/glu_functions_02_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 gltbx/glu_functions_02_bpl.cpp g++ -o gltbx/glu_functions_03_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 gltbx/glu_functions_03_bpl.cpp g++ -o gltbx/quadrics_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/gltbx/quadrics_ext.cpp g++ -o gltbx/util_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/gltbx/util_ext.cpp g++ -o gltbx/viewer_utils_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/gltbx/viewer_utils_ext.cpp g++ -o iotbx/ccp4_map/ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /<>/iotbx/ccp4_map/ext.cpp /<>/iotbx/ccp4_map/ext.cpp: In function ‘void iotbx::ccp4_map::write_ccp4_map_set_grid(const std::string&, const cctbx::uctbx::unit_cell&, const cctbx::sgtbx::space_group&, const scitbx::af::int3&, const scitbx::af::const_ref >&, const scitbx::af::const_ref >&)’: /<>/iotbx/ccp4_map/ext.cpp:178:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 178 | for (int i = 0; i < labels.size(); i++) { | ~~^~~~~~~~~~~~~~~ /<>/iotbx/ccp4_map/ext.cpp:213:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 213 | for (int i = 0; i < data_ref.accessor()[0]; i++) { /<>/iotbx/ccp4_map/ext.cpp:215:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 215 | for (int j = 0; j < data_ref.accessor()[1]; j++) { /<>/iotbx/ccp4_map/ext.cpp:216:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 216 | for (int k = 0; k < data_ref.accessor()[2]; k++) { /<>/iotbx/ccp4_map/ext.cpp: In function ‘void iotbx::ccp4_map::write_ccp4_map_box(const std::string&, const cctbx::uctbx::unit_cell&, const cctbx::sgtbx::space_group&, const scitbx::af::const_ref >&, const scitbx::af::const_ref >&)’: /<>/iotbx/ccp4_map/ext.cpp:245:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 245 | for (int i = 0; i < labels.size(); i++) { | ~~^~~~~~~~~~~~~~~ /<>/iotbx/ccp4_map/ext.cpp:278:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 278 | for (int i = 0; i < data_ref.accessor()[0]; i++) { /<>/iotbx/ccp4_map/ext.cpp:280:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 280 | for (int j = 0; j < data_ref.accessor()[1]; j++) { /<>/iotbx/ccp4_map/ext.cpp:281:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 281 | for (int k = 0; k < data_ref.accessor()[2]; k++) { /<>/iotbx/ccp4_map/ext.cpp: In function ‘void iotbx::ccp4_map::write_ccp4_map_p1_cell(const std::string&, const cctbx::uctbx::unit_cell&, const cctbx::sgtbx::space_group&, const scitbx::af::int3&, const scitbx::af::int3&, const scitbx::af::const_ref >&, const scitbx::af::const_ref >&)’: /<>/iotbx/ccp4_map/ext.cpp:311:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 311 | for (int i = 0; i < labels.size(); i++) { | ~~^~~~~~~~~~~~~~~ g++ -o iotbx/cif/boost_python/cif_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /<>/iotbx/cif/boost_python/cif_ext.cpp g++ -o iotbx/detectors/bruker.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /<>/iotbx/detectors/bruker.cpp g++ -o iotbx/detectors/bruker_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /<>/iotbx/detectors/bruker_ext.cpp g++ -o iotbx/detectors/detectors_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /<>/iotbx/detectors/detectors_ext.cpp g++ -o iotbx/detectors/image_divider.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /<>/iotbx/detectors/image_divider.cpp g++ -o iotbx/dsn6/ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /<>/iotbx/dsn6/ext.cpp g++ -o iotbx/misc/boost_python/dtrek_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /<>/iotbx/misc/boost_python/dtrek_ext.cpp g++ -o iotbx/misc/boost_python/scalepack_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /<>/iotbx/misc/boost_python/scalepack_ext.cpp g++ -o iotbx/mtz/batch_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /<>/iotbx/mtz/batch_bpl.cpp g++ -o iotbx/mtz/column.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 /<>/iotbx/mtz/column.cpp In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/vec3.h:4, from /<>/scitbx/mat3.h:6, from /<>/scitbx/sym_mat3.h:4, from /<>/cctbx/sgtbx/rot_mx.h:4, from /<>/cctbx/sgtbx/rt_mx.h:4, from /<>/cctbx/sgtbx/change_of_basis_op.h:4, from /<>/cctbx/sgtbx/tr_group.h:4, from /<>/cctbx/sgtbx/space_group.h:4, from /<>/iotbx/mtz/object.h:12, from /<>/iotbx/mtz/crystal.h:4, from /<>/iotbx/mtz/dataset.h:4, from /<>/iotbx/mtz/column.h:4, from /<>/iotbx/mtz/column.cpp:1: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/scitbx/error.h:16, from /<>/scitbx/mat3.h:5, from /<>/scitbx/sym_mat3.h:4, from /<>/cctbx/sgtbx/rot_mx.h:4, from /<>/cctbx/sgtbx/rt_mx.h:4, from /<>/cctbx/sgtbx/change_of_basis_op.h:4, from /<>/cctbx/sgtbx/tr_group.h:4, from /<>/cctbx/sgtbx/space_group.h:4, from /<>/iotbx/mtz/object.h:12, from /<>/iotbx/mtz/crystal.h:4, from /<>/iotbx/mtz/dataset.h:4, from /<>/iotbx/mtz/batch.h:4, from /<>/iotbx/mtz/batch_bpl.cpp:6: /<>/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /<>/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /<>/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ In file included from /<>/scitbx/error.h:16, from /<>/scitbx/mat3.h:5: /<>/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /<>/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /<>/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ /<>/iotbx/mtz/column.cpp: In member function ‘void iotbx::mtz::column::set_reals(const scitbx::af::const_ref&, const scitbx::af::const_ref&)’: /<>/iotbx/mtz/column.cpp:253:48: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 253 | IOTBX_ASSERT(mtz_reflection_indices.size() <= nref_at_entry); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/iotbx/mtz/column.cpp:253:5: note: in expansion of macro ‘IOTBX_ASSERT’ 253 | IOTBX_ASSERT(mtz_reflection_indices.size() <= nref_at_entry); | ^~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /<>/cctbx/hendrickson_lattman.h:9, from /<>/iotbx/mtz/object.h:13: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = iotbx::mtz::batch; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ /<>/iotbx/mtz/batch_bpl.cpp:78:60: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o iotbx/mtz/column_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /<>/iotbx/mtz/column_bpl.cpp g++ -o iotbx/mtz/crystal.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 /<>/iotbx/mtz/crystal.cpp In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/vec3.h:4, from /<>/scitbx/mat3.h:6, from /<>/scitbx/sym_mat3.h:4, from /<>/cctbx/sgtbx/rot_mx.h:4, from /<>/cctbx/sgtbx/rt_mx.h:4, from /<>/cctbx/sgtbx/change_of_basis_op.h:4, from /<>/cctbx/sgtbx/tr_group.h:4, from /<>/cctbx/sgtbx/space_group.h:4, from /<>/iotbx/mtz/object.h:12, from /<>/iotbx/mtz/crystal.h:4, from /<>/iotbx/mtz/dataset.h:4, from /<>/iotbx/mtz/crystal.cpp:1: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/scitbx/error.h:16, from /<>/scitbx/mat3.h:5: /<>/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /<>/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /<>/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ In file included from /<>/scitbx/error.h:16, from /<>/scitbx/mat3.h:5, from /<>/scitbx/sym_mat3.h:4, from /<>/cctbx/sgtbx/rot_mx.h:4, from /<>/cctbx/sgtbx/rt_mx.h:4, from /<>/cctbx/sgtbx/change_of_basis_op.h:4, from /<>/cctbx/sgtbx/tr_group.h:4, from /<>/cctbx/sgtbx/space_group.h:4, from /<>/iotbx/mtz/object.h:12, from /<>/iotbx/mtz/crystal.h:4, from /<>/iotbx/mtz/dataset.h:4, from /<>/iotbx/mtz/column.h:4, from /<>/iotbx/mtz/column_bpl.cpp:6: /<>/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /<>/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /<>/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ g++ -o iotbx/mtz/crystal_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /<>/iotbx/mtz/crystal_bpl.cpp In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /<>/cctbx/hendrickson_lattman.h:9, from /<>/iotbx/mtz/object.h:13: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = iotbx::mtz::column; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ /<>/iotbx/mtz/column_bpl.cpp:76:60: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o iotbx/mtz/dataset.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 /<>/iotbx/mtz/dataset.cpp In file included from /<>/scitbx/error.h:16, from /<>/scitbx/mat3.h:5, from /<>/scitbx/sym_mat3.h:4, from /<>/cctbx/sgtbx/rot_mx.h:4, from /<>/cctbx/sgtbx/rt_mx.h:4, from /<>/cctbx/sgtbx/change_of_basis_op.h:4, from /<>/cctbx/sgtbx/tr_group.h:4, from /<>/cctbx/sgtbx/space_group.h:4, from /<>/iotbx/mtz/object.h:12, from /<>/iotbx/mtz/crystal.h:4, from /<>/iotbx/mtz/dataset.h:4, from /<>/iotbx/mtz/crystal_bpl.cpp:6: /<>/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /<>/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /<>/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /<>/cctbx/hendrickson_lattman.h:9, from /<>/iotbx/mtz/object.h:13: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = iotbx::mtz::crystal; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ /<>/iotbx/mtz/crystal_bpl.cpp:42:60: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/vec3.h:4, from /<>/scitbx/mat3.h:6, from /<>/scitbx/sym_mat3.h:4, from /<>/cctbx/sgtbx/rot_mx.h:4, from /<>/cctbx/sgtbx/rt_mx.h:4, from /<>/cctbx/sgtbx/change_of_basis_op.h:4, from /<>/cctbx/sgtbx/tr_group.h:4, from /<>/cctbx/sgtbx/space_group.h:4, from /<>/iotbx/mtz/object.h:12, from /<>/iotbx/mtz/crystal.h:4, from /<>/iotbx/mtz/dataset.h:4, from /<>/iotbx/mtz/batch.h:4, from /<>/iotbx/mtz/dataset.cpp:1: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/scitbx/error.h:16, from /<>/scitbx/mat3.h:5: /<>/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /<>/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /<>/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ g++ -o iotbx/mtz/dataset_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /<>/iotbx/mtz/dataset_bpl.cpp g++ -o iotbx/mtz/ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /<>/iotbx/mtz/ext.cpp g++ -o iotbx/mtz/object.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 /<>/iotbx/mtz/object.cpp g++ -o iotbx/mtz/object_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /<>/iotbx/mtz/object_bpl.cpp In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/cctbx/hendrickson_lattman.h:4, from /<>/cctbx/miller/sym_equiv.h:4, from /<>/cctbx/miller/asu.h:4, from /<>/iotbx/mtz/object.cpp:5: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/scitbx/error.h:16, from /<>/scitbx/array_family/ref.h:4: /<>/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /<>/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /<>/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ /<>/iotbx/mtz/object.cpp: In member function ‘void iotbx::mtz::object::replace_miller_indices(const scitbx::af::const_ref >&)’: /<>/iotbx/mtz/object.cpp:433:40: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 433 | IOTBX_ASSERT(miller_indices.size() == n_reflections()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/iotbx/mtz/object.cpp:433:5: note: in expansion of macro ‘IOTBX_ASSERT’ 433 | IOTBX_ASSERT(miller_indices.size() == n_reflections()); | ^~~~~~~~~~~~ /<>/iotbx/mtz/object.cpp:435:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 435 | for(int i_refl=0;i_refl>/iotbx/mtz/object.cpp: In member function ‘scitbx::af::shared iotbx::mtz::object::extract_integers(const scitbx::af::const_ref&, const char*) const’: /<>/iotbx/mtz/object.cpp:624:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 624 | for(int i=0;i>/iotbx/mtz/object.cpp: In member function ‘scitbx::af::shared iotbx::mtz::object::extract_reals(const scitbx::af::const_ref&, const char*) const’: /<>/iotbx/mtz/object.cpp:684:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 684 | for(int i=0;i>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 /<>/iotbx/pdb/atom_selection.cpp In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/array_family/shared_plain.h:31, from /<>/scitbx/array_family/shared.h:4, from /<>/iotbx/pdb/namespace.h:4, from /<>/iotbx/pdb/hierarchy.h:8, from /<>/iotbx/pdb/atom_selection.cpp:1: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/scitbx/error.h:16, from /<>/scitbx/mat3.h:5, from /<>/scitbx/sym_mat3.h:4, from /<>/cctbx/sgtbx/rot_mx.h:4, from /<>/cctbx/sgtbx/rt_mx.h:4, from /<>/cctbx/sgtbx/change_of_basis_op.h:4, from /<>/cctbx/sgtbx/tr_group.h:4, from /<>/cctbx/sgtbx/space_group.h:4, from /<>/iotbx/mtz/object.h:12, from /<>/iotbx/mtz/crystal.h:4, from /<>/iotbx/mtz/dataset.h:4, from /<>/iotbx/mtz/batch.h:4, from /<>/iotbx/mtz/dataset_bpl.cpp:6: /<>/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /<>/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /<>/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /<>/cctbx/hendrickson_lattman.h:9, from /<>/iotbx/mtz/object.h:13: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = iotbx::mtz::dataset; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ /<>/iotbx/mtz/dataset_bpl.cpp:43:60: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /<>/scitbx/error.h:16, from /<>/scitbx/mat3.h:5, from /<>/scitbx/sym_mat3.h:4, from /<>/cctbx/sgtbx/rot_mx.h:4, from /<>/cctbx/sgtbx/rt_mx.h:4, from /<>/cctbx/sgtbx/change_of_basis_op.h:4, from /<>/cctbx/sgtbx/tr_group.h:4, from /<>/cctbx/sgtbx/space_group.h:4, from /<>/iotbx/mtz/object.h:12, from /<>/iotbx/mtz/crystal.h:4, from /<>/iotbx/mtz/dataset.h:4, from /<>/iotbx/mtz/batch.h:4, from /<>/iotbx/mtz/object_bpl.cpp:9: /<>/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /<>/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /<>/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ g++ -o iotbx/pdb/common_residue_names_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /<>/iotbx/pdb/common_residue_names_bpl.cpp g++ -o iotbx/pdb/construct_hierarchy.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 /<>/iotbx/pdb/construct_hierarchy.cpp In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/array_family/shared_plain.h:31, from /<>/scitbx/array_family/shared.h:4, from /<>/iotbx/pdb/namespace.h:4, from /<>/iotbx/pdb/hierarchy.h:8, from /<>/iotbx/pdb/input.h:4, from /<>/iotbx/pdb/construct_hierarchy.cpp:1: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/pdb/ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /<>/iotbx/pdb/ext.cpp g++ -o iotbx/pdb/hierarchy.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 /<>/iotbx/pdb/hierarchy.cpp In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/array_family/shared_plain.h:31, from /<>/scitbx/array_family/shared.h:4, from /<>/iotbx/pdb/namespace.h:4, from /<>/iotbx/pdb/hierarchy.h:8, from /<>/iotbx/pdb/hierarchy.cpp:1: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/pdb/hierarchy_atom_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /<>/iotbx/pdb/hierarchy_atom_bpl.cpp g++ -o iotbx/pdb/hierarchy_atoms.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 /<>/iotbx/pdb/hierarchy_atoms.cpp In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/array_family/shared_plain.h:31, from /<>/scitbx/array_family/shared.h:4, from /<>/iotbx/pdb/namespace.h:4, from /<>/iotbx/pdb/hierarchy.h:8, from /<>/iotbx/pdb/hierarchy_atoms.h:4, from /<>/iotbx/pdb/hierarchy_atoms.cpp:1: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/iotbx/pdb/hierarchy_atoms.h: At global scope: /<>/iotbx/pdb/hierarchy_atoms.h:157:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 157 | std::auto_ptr | ^~~~~~~~ In file included from /usr/include/c++/13/memory:78, from /<>/scitbx/array_family/detail/misc.h:5, from /<>/scitbx/array_family/tiny_plain.h:5: /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ /<>/iotbx/pdb/hierarchy_atoms.h:163:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 163 | std::auto_ptr | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ /<>/iotbx/pdb/hierarchy_atoms.cpp:242:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 242 | std::auto_ptr | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ /<>/iotbx/pdb/hierarchy_atoms.cpp: In function ‘std::auto_ptr iotbx::pdb::hierarchy::atoms::reset_tmp(const scitbx::af::const_ref&, int, int)’: /<>/iotbx/pdb/hierarchy_atoms.cpp:248:10: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 248 | std::auto_ptr result(new atom_tmp_sentinel(atoms)); | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ /<>/iotbx/pdb/hierarchy_atoms.cpp: At global scope: /<>/iotbx/pdb/hierarchy_atoms.cpp:257:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 257 | std::auto_ptr | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ /<>/iotbx/pdb/hierarchy_atoms.cpp: In function ‘std::auto_ptr iotbx::pdb::hierarchy::atoms::reset_tmp_for_occupancy_groups_simple(const scitbx::af::const_ref&)’: /<>/iotbx/pdb/hierarchy_atoms.cpp:261:10: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 261 | std::auto_ptr result(new atom_tmp_sentinel(atoms)); | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ g++ -o iotbx/pdb/hierarchy_atoms_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /<>/iotbx/pdb/hierarchy_atoms_bpl.cpp g++ -o iotbx/pdb/hierarchy_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /<>/iotbx/pdb/hierarchy_ext.cpp In file included from /<>/cctbx/xray/scatterer.h:5, from /<>/iotbx/pdb/hierarchy_atoms_bpl.cpp:2: /<>/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /<>/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i>/iotbx/pdb/hierarchy_atoms_bpl.cpp:13: /<>/iotbx/pdb/hierarchy_atoms.h: At global scope: /<>/iotbx/pdb/hierarchy_atoms.h:157:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 157 | std::auto_ptr | ^~~~~~~~ In file included from /usr/include/c++/13/memory:78, from /<>/scitbx/array_family/detail/misc.h:5, from /<>/scitbx/array_family/tiny_plain.h:5, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/vec3.h:4, from /<>/scitbx/mat3.h:6, from /<>/scitbx/sym_mat3.h:4, from /<>/cctbx/xray/scatterer_flags.h:5, from /<>/cctbx/xray/scatterer.h:4: /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ /<>/iotbx/pdb/hierarchy_atoms.h:163:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 163 | std::auto_ptr | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ /<>/iotbx/pdb/hierarchy_atoms_bpl.cpp: In function ‘void iotbx::pdb::hierarchy::atoms::bpl_wrap()’: /<>/iotbx/pdb/hierarchy_atoms_bpl.cpp:84:17: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 84 | std::auto_ptr, | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ In file included from /<>/cctbx/sgtbx/site_symmetry.h:6: /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:203:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:214:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/function/function_base.hpp:28, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /<>/iotbx/pdb/hierarchy_atoms_bpl.cpp:6: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = iotbx::pdb::hierarchy::atom; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ /<>/iotbx/pdb/hierarchy_atoms_bpl.cpp:87:36: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = iotbx::pdb::hierarchy::atom_with_labels; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ /<>/iotbx/pdb/hierarchy_atoms_bpl.cpp:91:44: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] In file included from /<>/iotbx/pdb/hierarchy_ext.cpp:11: /<>/iotbx/pdb/hierarchy_atoms.h:157:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 157 | std::auto_ptr | ^~~~~~~~ In file included from /usr/include/c++/13/memory:78, from /usr/include/boost/config/no_tr1/memory.hpp:21, from /usr/include/boost/get_pointer.hpp:14, from /usr/include/boost/python/object/pointer_holder.hpp:11, from /usr/include/boost/python/to_python_indirect.hpp:10, from /usr/include/boost/python/converter/arg_to_python.hpp:10, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /<>/iotbx/pdb/hierarchy_ext.cpp:4: /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ /<>/iotbx/pdb/hierarchy_atoms.h:163:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 163 | std::auto_ptr | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ g++ -o iotbx/pdb/hierarchy_select.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 /<>/iotbx/pdb/hierarchy_select.cpp In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/array_family/shared_plain.h:31, from /<>/scitbx/array_family/shared.h:4, from /<>/iotbx/pdb/namespace.h:4, from /<>/iotbx/pdb/hierarchy.h:8, from /<>/iotbx/pdb/hierarchy_select.cpp:1: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/pdb/hierarchy_write.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 /<>/iotbx/pdb/hierarchy_write.cpp In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/array_family/shared_plain.h:31, from /<>/scitbx/array_family/shared.h:4, from /<>/iotbx/pdb/namespace.h:4, from /<>/iotbx/pdb/hierarchy.h:8, from /<>/iotbx/pdb/hierarchy_atoms.h:4, from /<>/iotbx/pdb/hierarchy_write.cpp:1: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/pdb/hybrid_36_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /<>/iotbx/pdb/hybrid_36_bpl.cpp /<>/iotbx/pdb/hierarchy_atoms.h: At global scope: /<>/iotbx/pdb/hierarchy_atoms.h:157:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 157 | std::auto_ptr | ^~~~~~~~ In file included from /usr/include/c++/13/memory:78, from /<>/scitbx/array_family/detail/misc.h:5, from /<>/scitbx/array_family/tiny_plain.h:5: /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ /<>/iotbx/pdb/hierarchy_atoms.h:163:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 163 | std::auto_ptr | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ gcc -o iotbx/pdb/hybrid_36_c.o -c -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 /<>/iotbx/pdb/hybrid_36_c.c g++ -o iotbx/pdb/hybrid_36_cpp.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 /<>/iotbx/pdb/hybrid_36_cpp.cpp g++ -o iotbx/pdb/hybrid_36_fem.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/<>/fable iotbx/pdb/hybrid_36_fem.cpp In file included from /<>/fable/fem/io.hpp:8, from /<>/fable/fem/close_chain.hpp:4, from /<>/fable/fem/common.hpp:4, from /<>/fable/fem/read.hpp:4, from /<>/fable/fem/major_types.hpp:6, from /<>/fable/fem.hpp:10, from iotbx/pdb/hybrid_36_fem.cpp:1: /<>/fable/fem/utils/simple_streams.hpp: In member function ‘virtual void fem::utils::simple_ostream_to_char_ptr_and_size::put(char)’: /<>/fable/fem/utils/simple_streams.hpp:63:13: warning: comparison of integer expressions of different signedness: ‘fem::ssize_t’ {aka ‘long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 63 | if (i < sz) s[i++] = c; | ~~^~~~ /<>/fable/fem/common.hpp: In member function ‘void fem::common::getarg(int, fem::str_ref) const’: /<>/fable/fem/common.hpp:40:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 40 | if (pos < 0 || pos >= command_line_args.buffer.size()) { | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/fable/fem/utils/string_to_double_fmt.hpp:4, from /<>/fable/fem/read.hpp:9: /<>/fable/fem/utils/string_to_double.hpp: In member function ‘void fem::utils::string_to_double::convert(fem::utils::simple_istream&, unsigned int, int)’: /<>/fable/fem/utils/string_to_double.hpp:115:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 115 | if (dexp <= ad_hoc_limits::max_digit_count) { | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/fable/fem/read.hpp: In member function ‘double fem::read_loop::read_fmt_double()’: /<>/fable/fem/read.hpp:653:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 653 | if (iw+1 != ed.size()) { | ~~~~~^~~~~~~~~~~~ In file included from /<>/fable/fem/variant.hpp:5, from /<>/fable/fem/major_types.hpp:7: /<>/fable/fem/utils/equivalence.hpp: In member function ‘void fem::utils::equivalence::array_alignment::infer_diffs0_from_diff_matrix()’: /<>/fable/fem/utils/equivalence.hpp:93:28: warning: comparison of integer expressions of different signedness: ‘const fem::ssize_t’ {aka ‘const long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 93 | if (c0e[0] == i0) { | ~~~~~~~^~~~~ In file included from /<>/fable/fem/major_types.hpp:8: /<>/fable/fem/write.hpp: In destructor ‘fem::write_loop::~write_loop()’: /<>/fable/fem/write.hpp:704:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 704 | while (pos < internal_file_len) { | ~~~~^~~~~~~~~~~~~~~~~~~ g++ -o iotbx/pdb/input.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 /<>/iotbx/pdb/input.cpp In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/array_family/shared_plain.h:31, from /<>/scitbx/array_family/shared.h:4, from /<>/iotbx/pdb/namespace.h:4, from /<>/iotbx/pdb/hierarchy.h:8, from /<>/iotbx/pdb/input.h:4, from /<>/iotbx/pdb/input.cpp:1: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/scitbx/misc/file_utils.h:4, from /<>/iotbx/pdb/input.cpp:3: /<>/scitbx/misc/split_lines.h: In function ‘scitbx::af::shared > scitbx::misc::split_lines(const char*, std::size_t, bool, bool)’: /<>/scitbx/misc/split_lines.h:24:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 24 | while (i < size) { | ~~^~~~~~ /<>/scitbx/misc/split_lines.h:25:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 25 | while (i < size && data[i] != '\n' && data[i] != '\r') i++; | ~~^~~~~~ /<>/scitbx/misc/split_lines.h:27:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 27 | if (i < size) { | ~~^~~~~~ /<>/scitbx/misc/split_lines.h:28:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 28 | if (data[i] == '\r' && i+1 < size && data[i+1] == '\n') { | ~~~~^~~~~~ /<>/scitbx/misc/split_lines.h:46:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 46 | if (j < size) { | ~~^~~~~~ g++ -o iotbx/pdb/hybrid_36_fem -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread iotbx/pdb/hybrid_36_fem.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system g++ -o iotbx/pdb/input_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /<>/iotbx/pdb/input_bpl.cpp g++ -o iotbx/pdb/input_write.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 /<>/iotbx/pdb/input_write.cpp In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/array_family/shared_plain.h:31, from /<>/scitbx/array_family/shared.h:4, from /<>/iotbx/pdb/namespace.h:4, from /<>/iotbx/pdb/hierarchy.h:8, from /<>/iotbx/pdb/input.h:4, from /<>/iotbx/pdb/input_write.cpp:1: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/pdb/overall_counts.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 /<>/iotbx/pdb/overall_counts.cpp In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/array_family/shared_plain.h:31, from /<>/scitbx/array_family/shared.h:4, from /<>/iotbx/pdb/namespace.h:4, from /<>/iotbx/pdb/hierarchy.h:8, from /<>/iotbx/pdb/overall_counts.cpp:1: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/pdb/rna_dna_atom_names_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /<>/iotbx/pdb/rna_dna_atom_names_bpl.cpp g++ -o iotbx/pdb/utils.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 /<>/iotbx/pdb/utils.cpp g++ -o iotbx/pdb/write_utils.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 /<>/iotbx/pdb/write_utils.cpp In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/array_family/shared_plain.h:31, from /<>/scitbx/array_family/shared.h:4, from /<>/iotbx/pdb/namespace.h:4, from /<>/iotbx/pdb/write_utils.h:5, from /<>/iotbx/pdb/write_utils.cpp:1: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/iotbx/pdb/write_utils.cpp: In destructor ‘iotbx::pdb::write_utils::fstream_open_close::~fstream_open_close()’: /<>/iotbx/pdb/write_utils.cpp:42:7: warning: ‘throw’ will always call ‘terminate’ [-Wterminate] 42 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 43 | "Failure writing to file: \"" + file_name + "\""); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/iotbx/pdb/write_utils.cpp:42:7: note: in C++11 destructors default to ‘noexcept’ g++ -o iotbx/pdb/xray_structure_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /<>/iotbx/pdb/xray_structure_bpl.cpp g++ -o iotbx/shelx/shelx_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 -I/<>/fable /<>/iotbx/shelx/shelx_ext.cpp g++ -o iotbx/wildcard_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /<>/iotbx/wildcard_ext.cpp In file included from /<>/cctbx/xray/scatterer.h:5, from /<>/iotbx/pdb/xray_structure.h:6, from /<>/iotbx/pdb/xray_structure_bpl.cpp:7: /<>/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /<>/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /<>/iotbx/xplor/boost_python/xplor_ext.cpp In file included from /<>/cctbx/sgtbx/site_symmetry.h:6: /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:203:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:214:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] g++ -o lib/libann_adaptor.so.0.0.1 -shared -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libann_adaptor.so.0 annlib_adaptbx/ann/ann_adaptor.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system -lann-cctbx Create symlinks for: 'lib/libann_adaptor.so.0.0.1' 'lib/libann_adaptor.so.0'->'lib/libann_adaptor.so.0.0.1' 'lib/libann_adaptor.so'->'lib/libann_adaptor.so.0.0.1' g++ -o lib/annlib_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=annlib_ext.so.0 annlib_adaptbx/ann/boost_python/annlib_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lann-cctbx -lann_adaptor -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/annlib_ext.so.0.0.1' 'lib/annlib_ext.so.0'->'lib/annlib_ext.so.0.0.1' 'lib/annlib_ext.so'->'lib/annlib_ext.so.0.0.1' g++ -o lib/boost_adaptbx_boost_thread_test_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_boost_thread_test_ext.so.0 boost_adaptbx/tests/boost_thread_test.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/boost_adaptbx_boost_thread_test_ext.so.0.0.1' 'lib/boost_adaptbx_boost_thread_test_ext.so.0'->'lib/boost_adaptbx_boost_thread_test_ext.so.0.0.1' 'lib/boost_adaptbx_boost_thread_test_ext.so'->'lib/boost_adaptbx_boost_thread_test_ext.so.0.0.1' g++ -o lib/boost_adaptbx_graph_breadth_first_search_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_breadth_first_search_ext.so.0 boost_adaptbx/graph/breadth_first_search_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_clustering_algorithm_ext.so.0 boost_adaptbx/graph/clustering_algorithm_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/boost_adaptbx_graph_connected_component_algorithm_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_connected_component_algorithm_ext.so.0 boost_adaptbx/graph/connected_component_algorithm_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/boost_adaptbx_graph_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_ext.so.0 boost_adaptbx/graph/graph_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/boost_adaptbx_graph_breadth_first_search_ext.so.0.0.1' 'lib/boost_adaptbx_graph_breadth_first_search_ext.so.0'->'lib/boost_adaptbx_graph_breadth_first_search_ext.so.0.0.1' 'lib/boost_adaptbx_graph_breadth_first_search_ext.so'->'lib/boost_adaptbx_graph_breadth_first_search_ext.so.0.0.1' g++ -o lib/boost_adaptbx_graph_graph_structure_comparison_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_graph_structure_comparison_ext.so.0 boost_adaptbx/graph/graph_structure_comparison_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0.0.1' 'lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0'->'lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0.0.1' 'lib/boost_adaptbx_graph_clustering_algorithm_ext.so'->'lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0.0.1' g++ -o lib/boost_adaptbx_graph_maximum_clique_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_maximum_clique_ext.so.0 boost_adaptbx/graph/maximum_clique_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/boost_adaptbx_graph_connected_component_algorithm_ext.so.0.0.1' 'lib/boost_adaptbx_graph_connected_component_algorithm_ext.so.0'->'lib/boost_adaptbx_graph_connected_component_algorithm_ext.so.0.0.1' 'lib/boost_adaptbx_graph_connected_component_algorithm_ext.so'->'lib/boost_adaptbx_graph_connected_component_algorithm_ext.so.0.0.1' g++ -o lib/boost_adaptbx_graph_metric_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_metric_ext.so.0 boost_adaptbx/graph/metric_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/boost_adaptbx_graph_graph_structure_comparison_ext.so.0.0.1' 'lib/boost_adaptbx_graph_graph_structure_comparison_ext.so.0'->'lib/boost_adaptbx_graph_graph_structure_comparison_ext.so.0.0.1' 'lib/boost_adaptbx_graph_graph_structure_comparison_ext.so'->'lib/boost_adaptbx_graph_graph_structure_comparison_ext.so.0.0.1' g++ -o lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_min_cut_max_flow_ext.so.0 boost_adaptbx/graph/min_cut_max_flow_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/boost_adaptbx_graph_metric_ext.so.0.0.1' 'lib/boost_adaptbx_graph_metric_ext.so.0'->'lib/boost_adaptbx_graph_metric_ext.so.0.0.1' 'lib/boost_adaptbx_graph_metric_ext.so'->'lib/boost_adaptbx_graph_metric_ext.so.0.0.1' g++ -o lib/boost_adaptbx_graph_utility_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_utility_ext.so.0 boost_adaptbx/graph/utility_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/boost_adaptbx_graph_maximum_clique_ext.so.0.0.1' 'lib/boost_adaptbx_graph_maximum_clique_ext.so.0'->'lib/boost_adaptbx_graph_maximum_clique_ext.so.0.0.1' 'lib/boost_adaptbx_graph_maximum_clique_ext.so'->'lib/boost_adaptbx_graph_maximum_clique_ext.so.0.0.1' g++ -o lib/boost_adaptbx_python_streambuf_test_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_python_streambuf_test_ext.so.0 boost_adaptbx/tests/python_streambuf_test_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0.0.1' 'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0'->'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0.0.1' 'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so'->'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0.0.1' g++ -o lib/boost_optional_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_optional_ext.so.0 boost_adaptbx/optional_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/boost_adaptbx_graph_ext.so.0.0.1' 'lib/boost_adaptbx_graph_ext.so.0'->'lib/boost_adaptbx_graph_ext.so.0.0.1' 'lib/boost_adaptbx_graph_ext.so'->'lib/boost_adaptbx_graph_ext.so.0.0.1' Create symlinks for: 'lib/boost_adaptbx_python_streambuf_test_ext.so.0.0.1' 'lib/boost_adaptbx_python_streambuf_test_ext.so.0'->'lib/boost_adaptbx_python_streambuf_test_ext.so.0.0.1' 'lib/boost_adaptbx_python_streambuf_test_ext.so'->'lib/boost_adaptbx_python_streambuf_test_ext.so.0.0.1' g++ -o lib/boost_python_hybrid_times_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_python_hybrid_times_ext.so.0 boost_adaptbx/hybrid_times_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/boost_python_meta_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_python_meta_ext.so.0 boost_adaptbx/meta_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/boost_python_hybrid_times_ext.so.0.0.1' 'lib/boost_python_hybrid_times_ext.so.0'->'lib/boost_python_hybrid_times_ext.so.0.0.1' 'lib/boost_python_hybrid_times_ext.so'->'lib/boost_python_hybrid_times_ext.so.0.0.1' g++ -o lib/boost_rational_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_rational_ext.so.0 boost_adaptbx/rational_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/boost_optional_ext.so.0.0.1' 'lib/boost_optional_ext.so.0'->'lib/boost_optional_ext.so.0.0.1' 'lib/boost_optional_ext.so'->'lib/boost_optional_ext.so.0.0.1' g++ -o lib/boost_tuple_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_tuple_ext.so.0 boost_adaptbx/tuple_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/boost_adaptbx_graph_utility_ext.so.0.0.1' 'lib/boost_adaptbx_graph_utility_ext.so.0'->'lib/boost_adaptbx_graph_utility_ext.so.0.0.1' 'lib/boost_adaptbx_graph_utility_ext.so'->'lib/boost_adaptbx_graph_utility_ext.so.0.0.1' g++ -o lib/cbflib_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cbflib_ext.so.0 cbflib_adaptbx/detectors/boost_python/cbflib_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -L/usr/lib/s390x-linux-gnu/hdf5/serial -lcbf-private -lcbf -lboost_thread -lboost_system -lboost_python312 -lm -lhdf5 Create symlinks for: 'lib/boost_tuple_ext.so.0.0.1' 'lib/boost_tuple_ext.so.0'->'lib/boost_tuple_ext.so.0.0.1' 'lib/boost_tuple_ext.so'->'lib/boost_tuple_ext.so.0.0.1' g++ -o lib/libccp4io.so.0.0.1 -shared -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libccp4io.so.0 ccp4io_adaptbx/fortran_call_stubs.o ccp4io_adaptbx/printf_wrappers.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system -lm -lccp4c Create symlinks for: 'lib/libccp4io.so.0.0.1' 'lib/libccp4io.so.0'->'lib/libccp4io.so.0.0.1' 'lib/libccp4io.so'->'lib/libccp4io.so.0.0.1' g++ -o lib/ccp4io_adaptbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=ccp4io_adaptbx_ext.so.0 ccp4io_adaptbx/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lccp4io -lccp4c -lssm -lmmdb2 -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/boost_python_meta_ext.so.0.0.1' 'lib/boost_python_meta_ext.so.0'->'lib/boost_python_meta_ext.so.0.0.1' 'lib/boost_python_meta_ext.so'->'lib/boost_python_meta_ext.so.0.0.1' g++ -o scitbx/boost_python/utils.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/boost_python/utils.cpp Create symlinks for: 'lib/boost_rational_ext.so.0.0.1' 'lib/boost_rational_ext.so.0'->'lib/boost_rational_ext.so.0.0.1' 'lib/boost_rational_ext.so'->'lib/boost_rational_ext.so.0.0.1' g++ -o scitbx/boost_python/slice.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/boost_python/slice.cpp Create symlinks for: 'lib/cbflib_ext.so.0.0.1' 'lib/cbflib_ext.so.0'->'lib/cbflib_ext.so.0.0.1' 'lib/cbflib_ext.so'->'lib/cbflib_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/utils.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/array_family/boost_python/utils.cpp In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/array_family/small_plain.h:4, from /<>/scitbx/array_family/small.h:4, from /<>/scitbx/array_family/accessors/flex_grid.h:5, from /<>/scitbx/array_family/boost_python/utils.h:5, from /<>/scitbx/array_family/boost_python/utils.cpp:1: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o lib/cma_es_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cma_es_ext.so.0 cma_es/cma_es_ext.o cma_es/cma/cmaes.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/dxtbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_ext.so.0 dxtbx/src/dxtbx/boost_python/ext.o dxtbx/src/dxtbx/boost_python/compression.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -L/<>/.pybuild/cpython3_3.12/base/lib -L/usr/lib/s390x-linux-gnu/hdf5/serial -lm -ltiff -lboost_python312 -lcbf Create symlinks for: 'lib/ccp4io_adaptbx_ext.so.0.0.1' 'lib/ccp4io_adaptbx_ext.so.0'->'lib/ccp4io_adaptbx_ext.so.0.0.1' 'lib/ccp4io_adaptbx_ext.so'->'lib/ccp4io_adaptbx_ext.so.0.0.1' g++ -o lib/dxtbx_format_image_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_format_image_ext.so.0 dxtbx/src/dxtbx/format/boost_python/image_ext.o dxtbx/src/dxtbx/format/boost_python/cbf_read_buffer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -L/<>/.pybuild/cpython3_3.12/base/lib -L/usr/lib/s390x-linux-gnu/hdf5/serial -lm -ltiff -lboost_python312 -lcbf -lhdf5 g++ -o lib/libscitbx_boost_python.so.0.0.1 -shared -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -shared -rdynamic -std=c++14 -Wl,-soname=libscitbx_boost_python.so.0 scitbx/boost_python/utils.o scitbx/boost_python/slice.o scitbx/array_family/boost_python/utils.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system -lboost_python312 Create symlinks for: 'lib/libscitbx_boost_python.so.0.0.1' 'lib/libscitbx_boost_python.so.0'->'lib/libscitbx_boost_python.so.0.0.1' 'lib/libscitbx_boost_python.so'->'lib/libscitbx_boost_python.so.0.0.1' g++ -o lib/cctbx_merging_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_merging_ext.so.0 cctbx/merging/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_merging_ext.so.0.0.1' 'lib/cctbx_merging_ext.so.0'->'lib/cctbx_merging_ext.so.0.0.1' 'lib/cctbx_merging_ext.so'->'lib/cctbx_merging_ext.so.0.0.1' g++ -o lib/cctbx_asymmetric_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_asymmetric_map_ext.so.0 cctbx/maptbx/asymmetric_map_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lasymmetric_map -liotbx_xplor -lcctbx_sgtbx_asu -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/dxtbx_ext.so.0.0.1' 'lib/dxtbx_ext.so.0'->'lib/dxtbx_ext.so.0.0.1' 'lib/dxtbx_ext.so'->'lib/dxtbx_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_fp_fdp_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_fp_fdp_ext.so.0 cctbx/eltbx/boost_python/fp_fdp_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cma_es_ext.so.0.0.1' 'lib/cma_es_ext.so.0'->'lib/cma_es_ext.so.0.0.1' 'lib/cma_es_ext.so'->'lib/cma_es_ext.so.0.0.1' g++ -o lib/cctbx_sgtbx_asu_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_sgtbx_asu_ext.so.0 cctbx/sgtbx/direct_space_asu/proto/asu_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx_sgtbx_asu -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/dxtbx_format_image_ext.so.0.0.1' 'lib/dxtbx_format_image_ext.so.0'->'lib/dxtbx_format_image_ext.so.0.0.1' 'lib/dxtbx_format_image_ext.so'->'lib/dxtbx_format_image_ext.so.0.0.1' g++ -o lib/cctbx_maptbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_maptbx_ext.so.0 cctbx/maptbx/boost_python/maptbx_ext.o cctbx/maptbx/boost_python/grid_indices_around_sites.o cctbx/maptbx/boost_python/grid_tags.o cctbx/maptbx/boost_python/gridding.o cctbx/maptbx/boost_python/misc.o cctbx/maptbx/boost_python/peak_search.o cctbx/maptbx/boost_python/pymol_interface.o cctbx/maptbx/boost_python/statistics.o cctbx/maptbx/boost_python/structure_factors.o cctbx/maptbx/boost_python/coordinate_transformers.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_eltbx_fp_fdp_ext.so.0.0.1' 'lib/cctbx_eltbx_fp_fdp_ext.so.0'->'lib/cctbx_eltbx_fp_fdp_ext.so.0.0.1' 'lib/cctbx_eltbx_fp_fdp_ext.so'->'lib/cctbx_eltbx_fp_fdp_ext.so.0.0.1' g++ -o lib/cctbx_xray_observations_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_xray_observations_ext.so.0 cctbx/xray/observations/boost_python/observations.o cctbx/xray/observations/boost_python/observations_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_asymmetric_map_ext.so.0.0.1' 'lib/cctbx_asymmetric_map_ext.so.0'->'lib/cctbx_asymmetric_map_ext.so.0.0.1' 'lib/cctbx_asymmetric_map_ext.so'->'lib/cctbx_asymmetric_map_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_wavelengths_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_wavelengths_ext.so.0 cctbx/eltbx/boost_python/wavelengths_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_eltbx_wavelengths_ext.so.0.0.1' 'lib/cctbx_eltbx_wavelengths_ext.so.0'->'lib/cctbx_eltbx_wavelengths_ext.so.0.0.1' 'lib/cctbx_eltbx_wavelengths_ext.so'->'lib/cctbx_eltbx_wavelengths_ext.so.0.0.1' g++ -o lib/cctbx_maptbx_bcr_bcr_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_maptbx_bcr_bcr_ext.so.0 cctbx/maptbx/bcr/bcr_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_xray_observations_ext.so.0.0.1' 'lib/cctbx_xray_observations_ext.so.0'->'lib/cctbx_xray_observations_ext.so.0.0.1' 'lib/cctbx_xray_observations_ext.so'->'lib/cctbx_xray_observations_ext.so.0.0.1' g++ -o lib/cctbx_emma_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_emma_ext.so.0 cctbx/boost_python/emma_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_sgtbx_asu_ext.so.0.0.1' 'lib/cctbx_sgtbx_asu_ext.so.0'->'lib/cctbx_sgtbx_asu_ext.so.0.0.1' 'lib/cctbx_sgtbx_asu_ext.so'->'lib/cctbx_sgtbx_asu_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_covalent_radii_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_covalent_radii_ext.so.0 cctbx/eltbx/boost_python/covalent_radii_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_eltbx_covalent_radii_ext.so.0.0.1' 'lib/cctbx_eltbx_covalent_radii_ext.so.0'->'lib/cctbx_eltbx_covalent_radii_ext.so.0.0.1' 'lib/cctbx_eltbx_covalent_radii_ext.so'->'lib/cctbx_eltbx_covalent_radii_ext.so.0.0.1' g++ -o lib/cctbx_translation_search_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_translation_search_ext.so.0 cctbx/translation_search/boost_python/translation_search_ext.o cctbx/translation_search/boost_python/fast_nv1995.o cctbx/translation_search/boost_python/fast_terms.o cctbx/translation_search/boost_python/symmetry_flags.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_maptbx_bcr_bcr_ext.so.0.0.1' 'lib/cctbx_maptbx_bcr_bcr_ext.so.0'->'lib/cctbx_maptbx_bcr_bcr_ext.so.0.0.1' 'lib/cctbx_maptbx_bcr_bcr_ext.so'->'lib/cctbx_maptbx_bcr_bcr_ext.so.0.0.1' g++ -o lib/cctbx_french_wilson_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_french_wilson_ext.so.0 cctbx/boost_python/french_wilson_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_emma_ext.so.0.0.1' 'lib/cctbx_emma_ext.so.0'->'lib/cctbx_emma_ext.so.0.0.1' 'lib/cctbx_emma_ext.so'->'lib/cctbx_emma_ext.so.0.0.1' g++ -o lib/cctbx_adptbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_adptbx_ext.so.0 cctbx/adptbx/boost_python/adptbx_ext.o cctbx/adptbx/boost_python/hirshfeld.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_french_wilson_ext.so.0.0.1' 'lib/cctbx_french_wilson_ext.so.0'->'lib/cctbx_french_wilson_ext.so.0.0.1' 'lib/cctbx_french_wilson_ext.so'->'lib/cctbx_french_wilson_ext.so.0.0.1' g++ -o lib/cctbx_adp_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_adp_restraints_ext.so.0 cctbx/adp_restraints/adp_restraints_bpl.o cctbx/adp_restraints/adp_restraints_ext.o cctbx/adp_restraints/rigid_bond_bpl.o cctbx/adp_restraints/rigu_bpl.o cctbx/adp_restraints/adp_similarity_bpl.o cctbx/adp_restraints/isotropic_adp_bpl.o cctbx/adp_restraints/aniso_restraints_bpl.o cctbx/adp_restraints/fixed_u_eq_adp_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_translation_search_ext.so.0.0.1' 'lib/cctbx_translation_search_ext.so.0'->'lib/cctbx_translation_search_ext.so.0.0.1' 'lib/cctbx_translation_search_ext.so'->'lib/cctbx_translation_search_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_henke_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_henke_ext.so.0 cctbx/eltbx/boost_python/henke_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_adptbx_ext.so.0.0.1' 'lib/cctbx_adptbx_ext.so.0'->'lib/cctbx_adptbx_ext.so.0.0.1' 'lib/cctbx_adptbx_ext.so'->'lib/cctbx_adptbx_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_neutron_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_neutron_ext.so.0 cctbx/eltbx/boost_python/neutron_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_eltbx_henke_ext.so.0.0.1' 'lib/cctbx_eltbx_henke_ext.so.0'->'lib/cctbx_eltbx_henke_ext.so.0.0.1' 'lib/cctbx_eltbx_henke_ext.so'->'lib/cctbx_eltbx_henke_ext.so.0.0.1' g++ -o lib/cctbx_sgtbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_sgtbx_ext.so.0 cctbx/sgtbx/boost_python/sgtbx_ext.o cctbx/sgtbx/boost_python/brick.o cctbx/sgtbx/boost_python/change_of_basis.o cctbx/sgtbx/boost_python/find_affine.o cctbx/sgtbx/boost_python/lattice_symmetry.o cctbx/sgtbx/boost_python/phase_info.o cctbx/sgtbx/boost_python/reciprocal_space_asu.o cctbx/sgtbx/boost_python/rot_mx.o cctbx/sgtbx/boost_python/rt_mx.o cctbx/sgtbx/boost_python/search_symmetry.o cctbx/sgtbx/boost_python/seminvariant.o cctbx/sgtbx/boost_python/site_symmetry.o cctbx/sgtbx/boost_python/space_group.o cctbx/sgtbx/boost_python/space_group_type.o cctbx/sgtbx/boost_python/sym_equiv_sites.o cctbx/sgtbx/boost_python/symbols.o cctbx/sgtbx/boost_python/tensor_rank_2.o cctbx/sgtbx/boost_python/tensors.o cctbx/sgtbx/boost_python/tr_vec.o cctbx/sgtbx/boost_python/wyckoff.o cctbx/sgtbx/boost_python/select_generators.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_eltbx_neutron_ext.so.0.0.1' 'lib/cctbx_eltbx_neutron_ext.so.0'->'lib/cctbx_eltbx_neutron_ext.so.0.0.1' 'lib/cctbx_eltbx_neutron_ext.so'->'lib/cctbx_eltbx_neutron_ext.so.0.0.1' g++ -o lib/determine_unit_cell_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=determine_unit_cell_ext.so.0 cctbx/uctbx/determine_unit_cell/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/determine_unit_cell_ext.so.0.0.1' 'lib/determine_unit_cell_ext.so.0'->'lib/determine_unit_cell_ext.so.0.0.1' 'lib/determine_unit_cell_ext.so'->'lib/determine_unit_cell_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_tiny_pse_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_tiny_pse_ext.so.0 cctbx/eltbx/boost_python/tiny_pse_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_maptbx_ext.so.0.0.1' 'lib/cctbx_maptbx_ext.so.0'->'lib/cctbx_maptbx_ext.so.0.0.1' 'lib/cctbx_maptbx_ext.so'->'lib/cctbx_maptbx_ext.so.0.0.1' g++ -o lib/cctbx_math_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_math_ext.so.0 cctbx/math/boost_python/math_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_eltbx_tiny_pse_ext.so.0.0.1' 'lib/cctbx_eltbx_tiny_pse_ext.so.0'->'lib/cctbx_eltbx_tiny_pse_ext.so.0.0.1' 'lib/cctbx_eltbx_tiny_pse_ext.so'->'lib/cctbx_eltbx_tiny_pse_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_chemical_elements_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_chemical_elements_ext.so.0 cctbx/eltbx/boost_python/chemical_elements_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_math_ext.so.0.0.1' 'lib/cctbx_math_ext.so.0'->'lib/cctbx_math_ext.so.0.0.1' 'lib/cctbx_math_ext.so'->'lib/cctbx_math_ext.so.0.0.1' g++ -o lib/cctbx_miller_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_miller_ext.so.0 cctbx/miller/boost_python/miller_ext.o cctbx/miller/boost_python/asu.o cctbx/miller/boost_python/bins.o cctbx/miller/boost_python/change_basis.o cctbx/miller/boost_python/expand_to_p1.o cctbx/miller/boost_python/index_generator.o cctbx/miller/boost_python/index_span.o cctbx/miller/boost_python/match_bijvoet_mates.o cctbx/miller/boost_python/match_indices.o cctbx/miller/boost_python/match_multi_indices.o cctbx/miller/boost_python/merge_equivalents.o cctbx/miller/boost_python/phase_integrator.o cctbx/miller/boost_python/phase_transfer.o cctbx/miller/boost_python/sym_equiv.o cctbx/miller/boost_python/f_calc_map.o cctbx/miller/boost_python/lookup_utils.o cctbx/miller/boost_python/amplitude_normalisation.o cctbx/miller/boost_python/randomize_amplitude_and_phase.o cctbx/miller/boost_python/slices.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_eltbx_chemical_elements_ext.so.0.0.1' 'lib/cctbx_eltbx_chemical_elements_ext.so.0'->'lib/cctbx_eltbx_chemical_elements_ext.so.0.0.1' 'lib/cctbx_eltbx_chemical_elements_ext.so'->'lib/cctbx_eltbx_chemical_elements_ext.so.0.0.1' g++ -o lib/dxtbx_flumpy.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_flumpy.so.0 dxtbx/src/dxtbx/boost_python/flumpy.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -L/<>/.pybuild/cpython3_3.12/base/lib -L/usr/lib/s390x-linux-gnu/hdf5/serial -lm -ltiff -lboost_python312 -lcbf -lboost_thread -lboost_system -lm -lcctbx -lscitbx_boost_python -ltiff -lboost_python312 -lcbf -lhdf5 Create symlinks for: 'lib/cctbx_adp_restraints_ext.so.0.0.1' 'lib/cctbx_adp_restraints_ext.so.0'->'lib/cctbx_adp_restraints_ext.so.0.0.1' 'lib/cctbx_adp_restraints_ext.so'->'lib/cctbx_adp_restraints_ext.so.0.0.1' g++ -o lib/cctbx_symmetry_search_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_symmetry_search_ext.so.0 cctbx/symmetry_search/boost_python/symmetry_search_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_symmetry_search_ext.so.0.0.1' 'lib/cctbx_symmetry_search_ext.so.0'->'lib/cctbx_symmetry_search_ext.so.0.0.1' 'lib/cctbx_symmetry_search_ext.so'->'lib/cctbx_symmetry_search_ext.so.0.0.1' g++ -o lib/cctbx_geometry_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_geometry_ext.so.0 cctbx/geometry/boost_python/geometry_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/dxtbx_flumpy.so.0.0.1' 'lib/dxtbx_flumpy.so.0'->'lib/dxtbx_flumpy.so.0.0.1' 'lib/dxtbx_flumpy.so'->'lib/dxtbx_flumpy.so.0.0.1' g++ -o lib/cctbx_array_family_flex_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_array_family_flex_ext.so.0 cctbx/array_family/boost_python/flex_ext.o cctbx/array_family/boost_python/flex_hendrickson_lattman.o cctbx/array_family/boost_python/flex_miller_index.o cctbx/array_family/boost_python/flex_xray_scatterer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_geometry_ext.so.0.0.1' 'lib/cctbx_geometry_ext.so.0'->'lib/cctbx_geometry_ext.so.0.0.1' 'lib/cctbx_geometry_ext.so'->'lib/cctbx_geometry_ext.so.0.0.1' g++ -o lib/cctbx_xray_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_xray_ext.so.0 cctbx/xray/boost_python/xray_ext.o cctbx/xray/boost_python/conversions.o cctbx/xray/boost_python/gradient_flags.o cctbx/xray/boost_python/gradients_direct.o cctbx/xray/boost_python/each_hkl_gradients_direct.o cctbx/xray/boost_python/fast_gradients.o cctbx/xray/boost_python/minimization.o cctbx/xray/boost_python/scatterer_flags.o cctbx/xray/boost_python/scatterer.o cctbx/xray/boost_python/scattering_type_registry.o cctbx/xray/boost_python/sampling_base.o cctbx/xray/boost_python/sampled_model_density.o cctbx/xray/boost_python/structure_factors_direct.o cctbx/xray/boost_python/structure_factors_simple.o cctbx/xray/boost_python/curvatures_simple.o cctbx/xray/boost_python/targets.o cctbx/xray/boost_python/f_model_bpl.o cctbx/xray/boost_python/twin_targets.o cctbx/xray/boost_python/grouped_data.o cctbx/xray/boost_python/parameter_map.o cctbx/xray/boost_python/twin_components.o cctbx/xray/boost_python/extinction.o cctbx/xray/boost_python/sigmaa.o cctbx/xray/targets/shelxl_wght_ls_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_miller_ext.so.0.0.1' 'lib/cctbx_miller_ext.so.0'->'lib/cctbx_miller_ext.so.0.0.1' 'lib/cctbx_miller_ext.so'->'lib/cctbx_miller_ext.so.0.0.1' g++ -o lib/cctbx_geometry_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_geometry_restraints_ext.so.0 cctbx/geometry_restraints/geometry_restraints_ext.o cctbx/geometry_restraints/bond_bpl.o cctbx/geometry_restraints/bond_similarity_bpl.o cctbx/geometry_restraints/bond_sorted_bpl.o cctbx/geometry_restraints/nonbonded_bpl.o cctbx/geometry_restraints/nonbonded_sorted_bpl.o cctbx/geometry_restraints/angle_bpl.o cctbx/geometry_restraints/dihedral_bpl.o cctbx/geometry_restraints/chirality_bpl.o cctbx/geometry_restraints/planarity_bpl.o cctbx/geometry_restraints/parallelity_bpl.o cctbx/geometry_restraints/motif_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_sgtbx_ext.so.0.0.1' 'lib/cctbx_sgtbx_ext.so.0'->'lib/cctbx_sgtbx_ext.so.0.0.1' 'lib/cctbx_sgtbx_ext.so'->'lib/cctbx_sgtbx_ext.so.0.0.1' g++ -o lib/cctbx_crystal_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_crystal_ext.so.0 cctbx/crystal/crystal_ext.o cctbx/crystal/asu_clusters_bpl.o cctbx/crystal/close_packing_bpl.o cctbx/crystal/coordination_sequences_bpl.o cctbx/crystal/direct_space_asu_bpl.o cctbx/crystal/incremental_pairs_bpl.o cctbx/crystal/neighbors_bpl.o cctbx/crystal/pair_tables_bpl.o cctbx/crystal/site_cluster_analysis_bpl.o cctbx/crystal/symmetry_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_array_family_flex_ext.so.0.0.1' 'lib/cctbx_array_family_flex_ext.so.0'->'lib/cctbx_array_family_flex_ext.so.0.0.1' 'lib/cctbx_array_family_flex_ext.so'->'lib/cctbx_array_family_flex_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_icsd_radii_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_icsd_radii_ext.so.0 cctbx/eltbx/boost_python/icsd_radii_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_eltbx_icsd_radii_ext.so.0.0.1' 'lib/cctbx_eltbx_icsd_radii_ext.so.0'->'lib/cctbx_eltbx_icsd_radii_ext.so.0.0.1' 'lib/cctbx_eltbx_icsd_radii_ext.so'->'lib/cctbx_eltbx_icsd_radii_ext.so.0.0.1' g++ -o lib/cctbx_uctbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_uctbx_ext.so.0 cctbx/uctbx/boost_python/uctbx_ext.o cctbx/uctbx/boost_python/fast_minimum_reduction.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_uctbx_ext.so.0.0.1' 'lib/cctbx_uctbx_ext.so.0'->'lib/cctbx_uctbx_ext.so.0.0.1' 'lib/cctbx_uctbx_ext.so'->'lib/cctbx_uctbx_ext.so.0.0.1' g++ -o lib/cctbx_statistics_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_statistics_ext.so.0 cctbx/boost_python/statistics_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_statistics_ext.so.0.0.1' 'lib/cctbx_statistics_ext.so.0'->'lib/cctbx_statistics_ext.so.0.0.1' 'lib/cctbx_statistics_ext.so'->'lib/cctbx_statistics_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_xray_scattering_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_xray_scattering_ext.so.0 cctbx/eltbx/boost_python/xray_scattering_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_eltbx_xray_scattering_ext.so.0.0.1' 'lib/cctbx_eltbx_xray_scattering_ext.so.0'->'lib/cctbx_eltbx_xray_scattering_ext.so.0.0.1' 'lib/cctbx_eltbx_xray_scattering_ext.so'->'lib/cctbx_eltbx_xray_scattering_ext.so.0.0.1' g++ -o lib/cctbx_orientation_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_orientation_ext.so.0 cctbx/boost_python/orientation_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_orientation_ext.so.0.0.1' 'lib/cctbx_orientation_ext.so.0'->'lib/cctbx_orientation_ext.so.0.0.1' 'lib/cctbx_orientation_ext.so'->'lib/cctbx_orientation_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_attenuation_coefficient_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_attenuation_coefficient_ext.so.0 cctbx/eltbx/boost_python/attenuation_coefficient_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_crystal_ext.so.0.0.1' 'lib/cctbx_crystal_ext.so.0'->'lib/cctbx_crystal_ext.so.0.0.1' 'lib/cctbx_crystal_ext.so'->'lib/cctbx_crystal_ext.so.0.0.1' g++ -o lib/cctbx_covariance_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_covariance_ext.so.0 cctbx/covariance/boost_python/covariance_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_xray_ext.so.0.0.1' 'lib/cctbx_xray_ext.so.0'->'lib/cctbx_xray_ext.so.0.0.1' 'lib/cctbx_xray_ext.so'->'lib/cctbx_xray_ext.so.0.0.1' g++ -o lib/cctbx_multipolar_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_multipolar_ext.so.0 cctbx/multipolar/aspherical_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_multipolar_ext.so.0.0.1' 'lib/cctbx_multipolar_ext.so.0'->'lib/cctbx_multipolar_ext.so.0.0.1' 'lib/cctbx_multipolar_ext.so'->'lib/cctbx_multipolar_ext.so.0.0.1' g++ -o lib/cctbx_masks_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_masks_ext.so.0 cctbx/masks/boost_python/masks_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_eltbx_attenuation_coefficient_ext.so.0.0.1' 'lib/cctbx_eltbx_attenuation_coefficient_ext.so.0'->'lib/cctbx_eltbx_attenuation_coefficient_ext.so.0.0.1' 'lib/cctbx_eltbx_attenuation_coefficient_ext.so'->'lib/cctbx_eltbx_attenuation_coefficient_ext.so.0.0.1' g++ -o lib/cctbx_anharmonic_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_anharmonic_ext.so.0 cctbx/adptbx/boost_python/anharmonic_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_covariance_ext.so.0.0.1' 'lib/cctbx_covariance_ext.so.0'->'lib/cctbx_covariance_ext.so.0.0.1' 'lib/cctbx_covariance_ext.so'->'lib/cctbx_covariance_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_sasaki_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_sasaki_ext.so.0 cctbx/eltbx/boost_python/sasaki_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_masks_ext.so.0.0.1' 'lib/cctbx_masks_ext.so.0'->'lib/cctbx_masks_ext.so.0.0.1' 'lib/cctbx_masks_ext.so'->'lib/cctbx_masks_ext.so.0.0.1' g++ -o lib/cctbx_dmtbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_dmtbx_ext.so.0 cctbx/dmtbx/boost_python/dmtbx_ext.o cctbx/dmtbx/boost_python/triplet_phase_relation.o cctbx/dmtbx/boost_python/triplet_generator.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_anharmonic_ext.so.0.0.1' 'lib/cctbx_anharmonic_ext.so.0'->'lib/cctbx_anharmonic_ext.so.0.0.1' 'lib/cctbx_anharmonic_ext.so'->'lib/cctbx_anharmonic_ext.so.0.0.1' g++ -o lib/dxtbx_format_nexus_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_format_nexus_ext.so.0 dxtbx/src/dxtbx/format/boost_python/nexus_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -L/<>/.pybuild/cpython3_3.12/base/lib -L/usr/lib/s390x-linux-gnu/hdf5/serial -lm -ltiff -lboost_python312 -lcbf -lhdf5 Create symlinks for: 'lib/cctbx_eltbx_sasaki_ext.so.0.0.1' 'lib/cctbx_eltbx_sasaki_ext.so.0'->'lib/cctbx_eltbx_sasaki_ext.so.0.0.1' 'lib/cctbx_eltbx_sasaki_ext.so'->'lib/cctbx_eltbx_sasaki_ext.so.0.0.1' g++ -o lib/dxtbx_imageset_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_imageset_ext.so.0 dxtbx/src/dxtbx/boost_python/imageset_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -L/<>/.pybuild/cpython3_3.12/base/lib -L/usr/lib/s390x-linux-gnu/hdf5/serial -lm -ltiff -lboost_python312 -lcbf -lhdf5 Create symlinks for: 'lib/dxtbx_format_nexus_ext.so.0.0.1' 'lib/dxtbx_format_nexus_ext.so.0'->'lib/dxtbx_format_nexus_ext.so.0.0.1' 'lib/dxtbx_format_nexus_ext.so'->'lib/dxtbx_format_nexus_ext.so.0.0.1' g++ -o lib/dxtbx_masking_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_masking_ext.so.0 dxtbx/src/dxtbx/masking/boost_python/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -L/<>/.pybuild/cpython3_3.12/base/lib -L/usr/lib/s390x-linux-gnu/hdf5/serial -lboost_thread -lboost_system -lm -lcctbx -lscitbx_boost_python -ltiff -lboost_python312 -lcbf -lhdf5 Create symlinks for: 'lib/cctbx_dmtbx_ext.so.0.0.1' 'lib/cctbx_dmtbx_ext.so.0'->'lib/cctbx_dmtbx_ext.so.0.0.1' 'lib/cctbx_dmtbx_ext.so'->'lib/cctbx_dmtbx_ext.so.0.0.1' g++ -o lib/dxtbx_model_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_model_ext.so.0 dxtbx/src/dxtbx/model/boost_python/beam.o dxtbx/src/dxtbx/model/boost_python/spectrum.o dxtbx/src/dxtbx/model/boost_python/goniometer.o dxtbx/src/dxtbx/model/boost_python/kappa_goniometer.o dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.o dxtbx/src/dxtbx/model/boost_python/panel.o dxtbx/src/dxtbx/model/boost_python/detector.o dxtbx/src/dxtbx/model/boost_python/scan.o dxtbx/src/dxtbx/model/boost_python/scan_helpers.o dxtbx/src/dxtbx/model/boost_python/crystal.o dxtbx/src/dxtbx/model/boost_python/parallax_correction.o dxtbx/src/dxtbx/model/boost_python/pixel_to_millimeter.o dxtbx/src/dxtbx/model/boost_python/experiment.o dxtbx/src/dxtbx/model/boost_python/experiment_list.o dxtbx/src/dxtbx/model/boost_python/model_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -L/<>/.pybuild/cpython3_3.12/base/lib -L/usr/lib/s390x-linux-gnu/hdf5/serial -lm -ltiff -lboost_python312 -lcbf -lboost_thread -lboost_system -lm -lcctbx -lscitbx_boost_python -ltiff -lboost_python312 -lcbf -lhdf5 Create symlinks for: 'lib/dxtbx_masking_ext.so.0.0.1' 'lib/dxtbx_masking_ext.so.0'->'lib/dxtbx_masking_ext.so.0.0.1' 'lib/dxtbx_masking_ext.so'->'lib/dxtbx_masking_ext.so.0.0.1' g++ -o lib/fable_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=fable_ext.so.0 fable/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/fable_ext.so.0.0.1' 'lib/fable_ext.so.0'->'lib/fable_ext.so.0.0.1' 'lib/fable_ext.so'->'lib/fable_ext.so.0.0.1' Create symlinks for: 'lib/cctbx_geometry_restraints_ext.so.0.0.1' 'lib/cctbx_geometry_restraints_ext.so.0'->'lib/cctbx_geometry_restraints_ext.so.0.0.1' 'lib/cctbx_geometry_restraints_ext.so'->'lib/cctbx_geometry_restraints_ext.so.0.0.1' g++ -o lib/gltbx_fonts_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_fonts_ext.so.0 gltbx/fonts_ext.o gltbx/font_ucs_8x13.o gltbx/font_ucs_9x15.o gltbx/font_ucs_10x20.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lGLU -lGL -lm g++ -o lib/gltbx_gl_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_gl_ext.so.0 gltbx/gl_ext.o gltbx/gl_defines_00_bpl.o gltbx/gl_defines_01_bpl.o gltbx/gl_defines_02_bpl.o gltbx/gl_defines_03_bpl.o gltbx/gl_defines_04_bpl.o gltbx/gl_defines_05_bpl.o gltbx/gl_defines_06_bpl.o gltbx/gl_defines_07_bpl.o gltbx/gl_functions_00_bpl.o gltbx/gl_functions_01_bpl.o gltbx/gl_functions_02_bpl.o gltbx/gl_functions_03_bpl.o gltbx/gl_functions_04_bpl.o gltbx/gl_functions_05_bpl.o gltbx/gl_functions_06_bpl.o gltbx/gl_functions_07_bpl.o gltbx/gl_functions_08_bpl.o gltbx/gl_functions_09_bpl.o gltbx/gl_functions_10_bpl.o gltbx/gl_functions_11_bpl.o gltbx/gl_functions_12_bpl.o gltbx/gl_functions_13_bpl.o gltbx/gl_functions_14_bpl.o gltbx/gl_functions_15_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lGLU -lGL -lm Create symlinks for: 'lib/dxtbx_imageset_ext.so.0.0.1' 'lib/dxtbx_imageset_ext.so.0'->'lib/dxtbx_imageset_ext.so.0.0.1' 'lib/dxtbx_imageset_ext.so'->'lib/dxtbx_imageset_ext.so.0.0.1' g++ -o lib/gltbx_glu_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_glu_ext.so.0 gltbx/glu_ext.o gltbx/glu_defines_00_bpl.o gltbx/glu_defines_01_bpl.o gltbx/glu_functions_00_bpl.o gltbx/glu_functions_01_bpl.o gltbx/glu_functions_02_bpl.o gltbx/glu_functions_03_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lGLU -lGL -lm Create symlinks for: 'lib/gltbx_fonts_ext.so.0.0.1' 'lib/gltbx_fonts_ext.so.0'->'lib/gltbx_fonts_ext.so.0.0.1' 'lib/gltbx_fonts_ext.so'->'lib/gltbx_fonts_ext.so.0.0.1' g++ -o lib/gltbx_quadrics_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_quadrics_ext.so.0 gltbx/quadrics_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lGLU -lGL -lm Create symlinks for: 'lib/gltbx_glu_ext.so.0.0.1' 'lib/gltbx_glu_ext.so.0'->'lib/gltbx_glu_ext.so.0.0.1' 'lib/gltbx_glu_ext.so'->'lib/gltbx_glu_ext.so.0.0.1' g++ -o lib/gltbx_util_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_util_ext.so.0 gltbx/util_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lGLU -lGL -lm Create symlinks for: 'lib/gltbx_quadrics_ext.so.0.0.1' 'lib/gltbx_quadrics_ext.so.0'->'lib/gltbx_quadrics_ext.so.0.0.1' 'lib/gltbx_quadrics_ext.so'->'lib/gltbx_quadrics_ext.so.0.0.1' g++ -o lib/gltbx_viewer_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_viewer_utils_ext.so.0 gltbx/viewer_utils_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lGLU -lGL -lm Create symlinks for: 'lib/gltbx_gl_ext.so.0.0.1' 'lib/gltbx_gl_ext.so.0'->'lib/gltbx_gl_ext.so.0.0.1' 'lib/gltbx_gl_ext.so'->'lib/gltbx_gl_ext.so.0.0.1' g++ -o lib/iotbx_ccp4_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_ccp4_map_ext.so.0 iotbx/ccp4_map/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lccp4c -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/gltbx_util_ext.so.0.0.1' 'lib/gltbx_util_ext.so.0'->'lib/gltbx_util_ext.so.0.0.1' 'lib/gltbx_util_ext.so'->'lib/gltbx_util_ext.so.0.0.1' g++ -o ucif/cifParser.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /<>/ucif/cifParser.cpp g++ -o ucif/cifLexer.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /<>/ucif/cifLexer.cpp Create symlinks for: 'lib/gltbx_viewer_utils_ext.so.0.0.1' 'lib/gltbx_viewer_utils_ext.so.0'->'lib/gltbx_viewer_utils_ext.so.0.0.1' 'lib/gltbx_viewer_utils_ext.so'->'lib/gltbx_viewer_utils_ext.so.0.0.1' g++ -o lib/iotbx_detectors_bruker_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_detectors_bruker_ext.so.0 iotbx/detectors/bruker_ext.o iotbx/detectors/bruker.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/iotbx_cif_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_cif_ext.so.0 iotbx/cif/boost_python/cif_ext.o ucif/cifParser.o ucif/cifLexer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system -lboost_python312 -lm -lantlr3c Create symlinks for: 'lib/iotbx_ccp4_map_ext.so.0.0.1' 'lib/iotbx_ccp4_map_ext.so.0'->'lib/iotbx_ccp4_map_ext.so.0.0.1' 'lib/iotbx_ccp4_map_ext.so'->'lib/iotbx_ccp4_map_ext.so.0.0.1' g++ -o lib/iotbx_detectors_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_detectors_ext.so.0 iotbx/detectors/detectors_ext.o iotbx/detectors/image_divider.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/iotbx_detectors_bruker_ext.so.0.0.1' 'lib/iotbx_detectors_bruker_ext.so.0'->'lib/iotbx_detectors_bruker_ext.so.0.0.1' 'lib/iotbx_detectors_bruker_ext.so'->'lib/iotbx_detectors_bruker_ext.so.0.0.1' g++ -o lib/iotbx_dsn6_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_dsn6_map_ext.so.0 iotbx/dsn6/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/iotbx_dsn6_map_ext.so.0.0.1' 'lib/iotbx_dsn6_map_ext.so.0'->'lib/iotbx_dsn6_map_ext.so.0.0.1' 'lib/iotbx_dsn6_map_ext.so'->'lib/iotbx_dsn6_map_ext.so.0.0.1' g++ -o lib/iotbx_dtrek_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_dtrek_ext.so.0 iotbx/misc/boost_python/dtrek_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/iotbx_cif_ext.so.0.0.1' 'lib/iotbx_cif_ext.so.0'->'lib/iotbx_cif_ext.so.0.0.1' 'lib/iotbx_cif_ext.so'->'lib/iotbx_cif_ext.so.0.0.1' g++ -o lib/libiotbx_mtz.so.0.0.1 -shared -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libiotbx_mtz.so.0 iotbx/mtz/object.o iotbx/mtz/crystal.o iotbx/mtz/dataset.o iotbx/mtz/column.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lccp4io -lccp4c -lm -lboost_thread -lboost_system Create symlinks for: 'lib/dxtbx_model_ext.so.0.0.1' 'lib/dxtbx_model_ext.so.0'->'lib/dxtbx_model_ext.so.0.0.1' 'lib/dxtbx_model_ext.so'->'lib/dxtbx_model_ext.so.0.0.1' g++ -o lib/libiotbx_pdb.so.0.0.1 -shared -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libiotbx_pdb.so.0 iotbx/pdb/hybrid_36_c.o iotbx/pdb/hybrid_36_cpp.o iotbx/pdb/utils.o iotbx/pdb/write_utils.o iotbx/pdb/hierarchy.o iotbx/pdb/hierarchy_select.o iotbx/pdb/hierarchy_atoms.o iotbx/pdb/construct_hierarchy.o iotbx/pdb/overall_counts.o iotbx/pdb/hierarchy_write.o iotbx/pdb/atom_selection.o iotbx/pdb/input.o iotbx/pdb/input_write.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system Create symlinks for: 'lib/iotbx_dtrek_ext.so.0.0.1' 'lib/iotbx_dtrek_ext.so.0'->'lib/iotbx_dtrek_ext.so.0.0.1' 'lib/iotbx_dtrek_ext.so'->'lib/iotbx_dtrek_ext.so.0.0.1' g++ -o lib/iotbx_scalepack_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_scalepack_ext.so.0 iotbx/misc/boost_python/scalepack_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/libiotbx_mtz.so.0.0.1' 'lib/libiotbx_mtz.so.0'->'lib/libiotbx_mtz.so.0.0.1' 'lib/libiotbx_mtz.so'->'lib/libiotbx_mtz.so.0.0.1' g++ -o lib/iotbx_mtz_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_mtz_ext.so.0 iotbx/mtz/ext.o iotbx/mtz/object_bpl.o iotbx/mtz/crystal_bpl.o iotbx/mtz/dataset_bpl.o iotbx/mtz/column_bpl.o iotbx/mtz/batch_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -liotbx_mtz -lcctbx -lccp4io -lccp4c -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/iotbx_detectors_ext.so.0.0.1' 'lib/iotbx_detectors_ext.so.0'->'lib/iotbx_detectors_ext.so.0.0.1' 'lib/iotbx_detectors_ext.so'->'lib/iotbx_detectors_ext.so.0.0.1' g++ -o lib/iotbx_shelx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_shelx_ext.so.0 iotbx/shelx/shelx_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/iotbx_scalepack_ext.so.0.0.1' 'lib/iotbx_scalepack_ext.so.0'->'lib/iotbx_scalepack_ext.so.0.0.1' 'lib/iotbx_scalepack_ext.so'->'lib/iotbx_scalepack_ext.so.0.0.1' g++ -o lib/iotbx_wildcard_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_wildcard_ext.so.0 iotbx/wildcard_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/iotbx_wildcard_ext.so.0.0.1' 'lib/iotbx_wildcard_ext.so.0'->'lib/iotbx_wildcard_ext.so.0.0.1' 'lib/iotbx_wildcard_ext.so'->'lib/iotbx_wildcard_ext.so.0.0.1' g++ -o lib/iotbx_xplor_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_xplor_ext.so.0 iotbx/xplor/boost_python/xplor_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -liotbx_xplor -lcctbx -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/iotbx_shelx_ext.so.0.0.1' 'lib/iotbx_shelx_ext.so.0'->'lib/iotbx_shelx_ext.so.0.0.1' 'lib/iotbx_shelx_ext.so'->'lib/iotbx_shelx_ext.so.0.0.1' g++ -o spotfinder/dxtbx_toolbox/libdistl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/<>/dxtbx/src -Ispotfinder/src -I/<>/spotfinder/src -Ispotfinder/include -I/<>/spotfinder/include /<>/spotfinder/dxtbx_toolbox/libdistl.cpp Create symlinks for: 'lib/iotbx_xplor_ext.so.0.0.1' 'lib/iotbx_xplor_ext.so.0'->'lib/iotbx_xplor_ext.so.0.0.1' 'lib/iotbx_xplor_ext.so'->'lib/iotbx_xplor_ext.so.0.0.1' g++ -o spotfinder/dxtbx_toolbox/distl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/<>/dxtbx/src -Ispotfinder/src -I/<>/spotfinder/src -Ispotfinder/include -I/<>/spotfinder/include /<>/spotfinder/dxtbx_toolbox/distl.cpp Create symlinks for: 'lib/libiotbx_pdb.so.0.0.1' 'lib/libiotbx_pdb.so.0'->'lib/libiotbx_pdb.so.0.0.1' 'lib/libiotbx_pdb.so'->'lib/libiotbx_pdb.so.0.0.1' g++ -o lib/iotbx_pdb_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_pdb_ext.so.0 iotbx/pdb/ext.o iotbx/pdb/hybrid_36_bpl.o iotbx/pdb/common_residue_names_bpl.o iotbx/pdb/rna_dna_atom_names_bpl.o iotbx/pdb/input_bpl.o iotbx/pdb/xray_structure_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -liotbx_pdb -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/iotbx_pdb_hierarchy_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_pdb_hierarchy_ext.so.0 iotbx/pdb/hierarchy_ext.o iotbx/pdb/hierarchy_atom_bpl.o iotbx/pdb/hierarchy_atoms_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -liotbx_pdb -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/iotbx_pdb_ext.so.0.0.1' 'lib/iotbx_pdb_ext.so.0'->'lib/iotbx_pdb_ext.so.0.0.1' 'lib/iotbx_pdb_ext.so'->'lib/iotbx_pdb_ext.so.0.0.1' g++ -o spotfinder/core_toolbox/spot.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/<>/dxtbx/src -Ispotfinder/src -I/<>/spotfinder/src -Ispotfinder/include -I/<>/spotfinder/include /<>/spotfinder/core_toolbox/spot.cpp Create symlinks for: 'lib/iotbx_mtz_ext.so.0.0.1' 'lib/iotbx_mtz_ext.so.0'->'lib/iotbx_mtz_ext.so.0.0.1' 'lib/iotbx_mtz_ext.so'->'lib/iotbx_mtz_ext.so.0.0.1' g++ -o spotfinder/core_toolbox/libdistl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/<>/dxtbx/src -Ispotfinder/src -I/<>/spotfinder/src -Ispotfinder/include -I/<>/spotfinder/include /<>/spotfinder/core_toolbox/libdistl.cpp g++ -o spotfinder/core_toolbox/hough.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/<>/dxtbx/src -Ispotfinder/src -I/<>/spotfinder/src -Ispotfinder/include -I/<>/spotfinder/include /<>/spotfinder/core_toolbox/hough.cpp g++ -o spotfinder/core_toolbox/distl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/<>/dxtbx/src -Ispotfinder/src -I/<>/spotfinder/src -Ispotfinder/include -I/<>/spotfinder/include /<>/spotfinder/core_toolbox/distl.cpp g++ -o spotfinder/core_toolbox/spotfilter.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/<>/dxtbx/src -Ispotfinder/src -I/<>/spotfinder/src -Ispotfinder/include -I/<>/spotfinder/include /<>/spotfinder/core_toolbox/spotfilter.cpp g++ -o mmtbx/masks/atom_mask.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/mmtbx/masks/atom_mask.cpp g++ -o mmtbx/tls/decompose.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/mmtbx/tls/decompose.cpp g++ -o lib/libspotfinder.so.0.0.1 -shared -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libspotfinder.so.0 spotfinder/core_toolbox/spot.o spotfinder/core_toolbox/libdistl.o spotfinder/core_toolbox/hough.o spotfinder/core_toolbox/distl.o spotfinder/core_toolbox/spotfilter.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lann-cctbx -lomptbx -lm Create symlinks for: 'lib/iotbx_pdb_hierarchy_ext.so.0.0.1' 'lib/iotbx_pdb_hierarchy_ext.so.0'->'lib/iotbx_pdb_hierarchy_ext.so.0.0.1' 'lib/iotbx_pdb_hierarchy_ext.so'->'lib/iotbx_pdb_hierarchy_ext.so.0.0.1' g++ -o rstbx/dps_core/dps_core.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/<>/dxtbx/src -Irstbx/src -I/<>/rstbx/src -Irstbx/include -I/<>/rstbx/include /<>/rstbx/dps_core/dps_core.cpp g++ -o lib/libmmtbx_tls.so.0.0.1 -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread -shared -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -Wl,-soname=libmmtbx_tls.so.0 mmtbx/tls/decompose.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lm Create symlinks for: 'lib/libspotfinder.so.0.0.1' 'lib/libspotfinder.so.0'->'lib/libspotfinder.so.0.0.1' 'lib/libspotfinder.so'->'lib/libspotfinder.so.0.0.1' g++ -o lib/libdxtbxspotfinder.so.0.0.1 -shared -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libdxtbxspotfinder.so.0 spotfinder/dxtbx_toolbox/libdistl.o spotfinder/dxtbx_toolbox/distl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lspotfinder -lann-cctbx -lomptbx -lm g++ -o rstbx/dps_core/directional_fft.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/<>/dxtbx/src -Irstbx/src -I/<>/rstbx/src -Irstbx/include -I/<>/rstbx/include /<>/rstbx/dps_core/directional_fft.cpp Create symlinks for: 'lib/libmmtbx_tls.so.0.0.1' 'lib/libmmtbx_tls.so.0'->'lib/libmmtbx_tls.so.0.0.1' 'lib/libmmtbx_tls.so'->'lib/libmmtbx_tls.so.0.0.1' g++ -o rstbx/dps_core/direction.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/<>/dxtbx/src -Irstbx/src -I/<>/rstbx/src -Irstbx/include -I/<>/rstbx/include /<>/rstbx/dps_core/direction.cpp Create symlinks for: 'lib/libdxtbxspotfinder.so.0.0.1' 'lib/libdxtbxspotfinder.so.0'->'lib/libdxtbxspotfinder.so.0.0.1' 'lib/libdxtbxspotfinder.so'->'lib/libdxtbxspotfinder.so.0.0.1' g++ -o rstbx/indexing_api/indexing_api.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/<>/dxtbx/src -Irstbx/src -I/<>/rstbx/src -Irstbx/include -I/<>/rstbx/include /<>/rstbx/indexing_api/indexing_api.cpp g++ -o rstbx/diffraction/ewald_sphere.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/<>/dxtbx/src -Irstbx/src -I/<>/rstbx/src -Irstbx/include -I/<>/rstbx/include /<>/rstbx/diffraction/ewald_sphere.cpp g++ -o rstbx/diffraction/partial_spot_position_partial_H.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/<>/dxtbx/src -Irstbx/src -I/<>/rstbx/src -Irstbx/include -I/<>/rstbx/include /<>/rstbx/diffraction/partial_spot_position_partial_H.cpp g++ -o scitbx/minpack/raw.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/scitbx/minpack/raw.cpp gcc -o scitbx/slatec/lib_c.o -c -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> /<>/scitbx/slatec/lib_c.c g++ -o lib/libscitbx_slatec.so.0.0.1 -shared -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libscitbx_slatec.so.0 scitbx/slatec/lib_c.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system -lm Create symlinks for: 'lib/libscitbx_slatec.so.0.0.1' 'lib/libscitbx_slatec.so.0'->'lib/libscitbx_slatec.so.0.0.1' 'lib/libscitbx_slatec.so'->'lib/libscitbx_slatec.so.0.0.1' g++ -o smtbx/refinement/constraints/affine.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -Ismtbx/refinement/constraints -I/<>/smtbx/refinement/constraints /<>/smtbx/refinement/constraints/affine.cpp g++ -o lib/libscitbx_minpack.so.0.0.1 -shared -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libscitbx_minpack.so.0 scitbx/minpack/raw.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system -lm g++ -o lib/librstbx.so.0.0.1 -shared -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=librstbx.so.0 rstbx/dps_core/dps_core.o rstbx/dps_core/directional_fft.o rstbx/dps_core/direction.o rstbx/indexing_api/indexing_api.o rstbx/diffraction/ewald_sphere.o rstbx/diffraction/partial_spot_position_partial_H.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system -lcctbx -lm Create symlinks for: 'lib/libscitbx_minpack.so.0.0.1' 'lib/libscitbx_minpack.so.0'->'lib/libscitbx_minpack.so.0.0.1' 'lib/libscitbx_minpack.so'->'lib/libscitbx_minpack.so.0.0.1' g++ -o smtbx/refinement/constraints/geometrical_hydrogens.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -Ismtbx/refinement/constraints -I/<>/smtbx/refinement/constraints /<>/smtbx/refinement/constraints/geometrical_hydrogens.cpp Create symlinks for: 'lib/librstbx.so.0.0.1' 'lib/librstbx.so.0'->'lib/librstbx.so.0.0.1' 'lib/librstbx.so'->'lib/librstbx.so.0.0.1' g++ -o smtbx/refinement/constraints/occupancy.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -Ismtbx/refinement/constraints -I/<>/smtbx/refinement/constraints /<>/smtbx/refinement/constraints/occupancy.cpp g++ -o smtbx/refinement/constraints/reparametrisation.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -Ismtbx/refinement/constraints -I/<>/smtbx/refinement/constraints /<>/smtbx/refinement/constraints/reparametrisation.cpp g++ -o lib/libmmtbx_masks.so.0.0.1 -shared -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libmmtbx_masks.so.0 mmtbx/masks/atom_mask.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lomptbx -lcctbx_sgtbx_asu -lm g++ -o smtbx/refinement/constraints/rigid.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -Ismtbx/refinement/constraints -I/<>/smtbx/refinement/constraints /<>/smtbx/refinement/constraints/rigid.cpp g++ -o smtbx/refinement/constraints/same_group.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -Ismtbx/refinement/constraints -I/<>/smtbx/refinement/constraints /<>/smtbx/refinement/constraints/same_group.cpp Create symlinks for: 'lib/libmmtbx_masks.so.0.0.1' 'lib/libmmtbx_masks.so.0'->'lib/libmmtbx_masks.so.0.0.1' 'lib/libmmtbx_masks.so'->'lib/libmmtbx_masks.so.0.0.1' g++ -o smtbx/refinement/constraints/scaled_adp.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -Ismtbx/refinement/constraints -I/<>/smtbx/refinement/constraints /<>/smtbx/refinement/constraints/scaled_adp.cpp g++ -o smtbx/refinement/constraints/shared.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -Ismtbx/refinement/constraints -I/<>/smtbx/refinement/constraints /<>/smtbx/refinement/constraints/shared.cpp g++ -o smtbx/refinement/constraints/special_position.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -Ismtbx/refinement/constraints -I/<>/smtbx/refinement/constraints /<>/smtbx/refinement/constraints/special_position.cpp g++ -o smtbx/refinement/constraints/symmetry_equivalent.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -Ismtbx/refinement/constraints -I/<>/smtbx/refinement/constraints /<>/smtbx/refinement/constraints/symmetry_equivalent.cpp g++ -o smtbx/refinement/constraints/u_eq_dependent_u_iso.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -Ismtbx/refinement/constraints -I/<>/smtbx/refinement/constraints /<>/smtbx/refinement/constraints/u_eq_dependent_u_iso.cpp g++ -o smtbx/refinement/constraints/u_iso_dependent_u_iso.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -Ismtbx/refinement/constraints -I/<>/smtbx/refinement/constraints /<>/smtbx/refinement/constraints/u_iso_dependent_u_iso.cpp g++ -o mmtbx/alignment/alignment_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include /<>/mmtbx/alignment/alignment_ext.cpp g++ -o mmtbx/building/loop_closure/ccd_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/mmtbx/building/loop_closure/ccd_bpl.cpp g++ -o mmtbx/bulk_solvent/bulk_solvent_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/mmtbx/bulk_solvent/bulk_solvent_ext.cpp g++ -o lib/libsmtbx_refinement_constraints.so.0.0.1 -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread -shared -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -Wl,-soname=libsmtbx_refinement_constraints.so.0 smtbx/refinement/constraints/affine.o smtbx/refinement/constraints/geometrical_hydrogens.o smtbx/refinement/constraints/occupancy.o smtbx/refinement/constraints/reparametrisation.o smtbx/refinement/constraints/rigid.o smtbx/refinement/constraints/same_group.o smtbx/refinement/constraints/scaled_adp.o smtbx/refinement/constraints/shared.o smtbx/refinement/constraints/special_position.o smtbx/refinement/constraints/symmetry_equivalent.o smtbx/refinement/constraints/u_eq_dependent_u_iso.o smtbx/refinement/constraints/u_iso_dependent_u_iso.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system Create symlinks for: 'lib/libsmtbx_refinement_constraints.so.0.0.1' 'lib/libsmtbx_refinement_constraints.so.0'->'lib/libsmtbx_refinement_constraints.so.0.0.1' 'lib/libsmtbx_refinement_constraints.so'->'lib/libsmtbx_refinement_constraints.so.0.0.1' g++ -o mmtbx/bulk_solvent/bulk_solvent.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/mmtbx/bulk_solvent/bulk_solvent.cpp g++ -o lib/mmtbx_alignment_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_alignment_ext.so.0 mmtbx/alignment/alignment_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o mmtbx/cablam/boost_python/cablam_align_utils_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /<>/mmtbx/cablam/boost_python/cablam_align_utils_ext.cpp Create symlinks for: 'lib/mmtbx_alignment_ext.so.0.0.1' 'lib/mmtbx_alignment_ext.so.0'->'lib/mmtbx_alignment_ext.so.0.0.1' 'lib/mmtbx_alignment_ext.so'->'lib/mmtbx_alignment_ext.so.0.0.1' g++ -o mmtbx/den/boost_python/den_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /<>/mmtbx/den/boost_python/den_ext.cpp g++ -o lib/mmtbx_building_loop_closure_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_building_loop_closure_ext.so.0 mmtbx/building/loop_closure/ccd_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -liotbx_pdb -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_building_loop_closure_ext.so.0.0.1' 'lib/mmtbx_building_loop_closure_ext.so.0'->'lib/mmtbx_building_loop_closure_ext.so.0.0.1' 'lib/mmtbx_building_loop_closure_ext.so'->'lib/mmtbx_building_loop_closure_ext.so.0.0.1' g++ -o mmtbx/secondary_structure/dssp_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /<>/mmtbx/secondary_structure/dssp_ext.cpp In file included from /<>/cctbx/sgtbx/wyckoff.h:4, from /<>/cctbx/sgtbx/sym_equiv_sites.h:5, from /<>/cctbx/crystal/direct_space_asu.h:4, from /<>/cctbx/geometry_restraints/asu_cache.h:4, from /<>/cctbx/geometry_restraints/bond.h:5, from /<>/mmtbx/den/den.h:2, from /<>/mmtbx/den/boost_python/den_ext.cpp:12: /<>/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /<>/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm In file included from /<>/cctbx/sgtbx/site_symmetry.h:6: /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:203:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:214:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /<>/cctbx/sgtbx/tensor_rank_2.h:9, from /<>/cctbx/sgtbx/site_symmetry.h:5: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = mmtbx::den::den_simple_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ /<>/mmtbx/den/boost_python/den_ext.cpp:53:78: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ Create symlinks for: 'lib/mmtbx_cablam_align_utils_ext.so.0.0.1' 'lib/mmtbx_cablam_align_utils_ext.so.0'->'lib/mmtbx_cablam_align_utils_ext.so.0.0.1' 'lib/mmtbx_cablam_align_utils_ext.so'->'lib/mmtbx_cablam_align_utils_ext.so.0.0.1' g++ -o mmtbx/dynamics/dynamics_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/mmtbx/dynamics/dynamics_ext.cpp g++ -o lib/mmtbx_dssp_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_dssp_ext.so.0 mmtbx/secondary_structure/dssp_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -liotbx_pdb -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_dssp_ext.so.0.0.1' 'lib/mmtbx_dssp_ext.so.0'->'lib/mmtbx_dssp_ext.so.0.0.1' 'lib/mmtbx_dssp_ext.so'->'lib/mmtbx_dssp_ext.so.0.0.1' g++ -o mmtbx/dynamics/dynamics.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/mmtbx/dynamics/dynamics.cpp g++ -o mmtbx/f_model/f_model_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/mmtbx/f_model/f_model_ext.cpp g++ -o lib/mmtbx_dynamics_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_dynamics_ext.so.0 mmtbx/dynamics/dynamics_ext.o mmtbx/dynamics/dynamics.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/mmtbx_bulk_solvent_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_bulk_solvent_ext.so.0 mmtbx/bulk_solvent/bulk_solvent_ext.o mmtbx/bulk_solvent/bulk_solvent.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/mmtbx_den_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_den_restraints_ext.so.0 mmtbx/den/boost_python/den_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_dynamics_ext.so.0.0.1' 'lib/mmtbx_dynamics_ext.so.0'->'lib/mmtbx_dynamics_ext.so.0.0.1' 'lib/mmtbx_dynamics_ext.so'->'lib/mmtbx_dynamics_ext.so.0.0.1' g++ -o mmtbx/geometry/boost_python/asa_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/mmtbx/geometry/boost_python/asa_ext.cpp Create symlinks for: 'lib/mmtbx_den_restraints_ext.so.0.0.1' 'lib/mmtbx_den_restraints_ext.so.0'->'lib/mmtbx_den_restraints_ext.so.0.0.1' 'lib/mmtbx_den_restraints_ext.so'->'lib/mmtbx_den_restraints_ext.so.0.0.1' g++ -o mmtbx/geometry/boost_python/clash_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/mmtbx/geometry/boost_python/clash_ext.cpp Create symlinks for: 'lib/mmtbx_bulk_solvent_ext.so.0.0.1' 'lib/mmtbx_bulk_solvent_ext.so.0'->'lib/mmtbx_bulk_solvent_ext.so.0.0.1' 'lib/mmtbx_bulk_solvent_ext.so'->'lib/mmtbx_bulk_solvent_ext.so.0.0.1' g++ -o mmtbx/geometry/boost_python/indexing_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/mmtbx/geometry/boost_python/indexing_ext.cpp In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /<>/mmtbx/geometry/boost_python/asa_ext.cpp:2: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /<>/mmtbx/geometry/boost_python/clash_ext.cpp:2: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/object_manager.hpp:8, from /usr/include/boost/python/extract.hpp:10, from /<>/mmtbx/geometry/boost_python/indexing_ext.cpp:2: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ g++ -o lib/mmtbx_f_model_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_f_model_ext.so.0 mmtbx/f_model/f_model_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_f_model_ext.so.0.0.1' 'lib/mmtbx_f_model_ext.so.0'->'lib/mmtbx_f_model_ext.so.0.0.1' 'lib/mmtbx_f_model_ext.so'->'lib/mmtbx_f_model_ext.so.0.0.1' g++ -o mmtbx/geometry/boost_python/primitive_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/mmtbx/geometry/boost_python/primitive_ext.cpp g++ -o lib/mmtbx_geometry_primitive_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_primitive_ext.so.0 mmtbx/geometry/boost_python/primitive_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_geometry_primitive_ext.so.0.0.1' 'lib/mmtbx_geometry_primitive_ext.so.0'->'lib/mmtbx_geometry_primitive_ext.so.0.0.1' 'lib/mmtbx_geometry_primitive_ext.so'->'lib/mmtbx_geometry_primitive_ext.so.0.0.1' g++ -o mmtbx/geometry/boost_python/shared_types_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/mmtbx/geometry/boost_python/shared_types_ext.cpp g++ -o lib/mmtbx_geometry_indexing_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_indexing_ext.so.0 mmtbx/geometry/boost_python/indexing_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /<>/mmtbx/geometry/boost_python/shared_types_ext.cpp:2: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ g++ -o lib/mmtbx_geometry_clash_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_clash_ext.so.0 mmtbx/geometry/boost_python/clash_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_geometry_indexing_ext.so.0.0.1' 'lib/mmtbx_geometry_indexing_ext.so.0'->'lib/mmtbx_geometry_indexing_ext.so.0.0.1' 'lib/mmtbx_geometry_indexing_ext.so'->'lib/mmtbx_geometry_indexing_ext.so.0.0.1' g++ -o mmtbx/geometry/boost_python/sphere_surface_sampling_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/mmtbx/geometry/boost_python/sphere_surface_sampling_ext.cpp g++ -o lib/mmtbx_geometry_shared_types_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_shared_types_ext.so.0 mmtbx/geometry/boost_python/shared_types_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_geometry_shared_types_ext.so.0.0.1' 'lib/mmtbx_geometry_shared_types_ext.so.0'->'lib/mmtbx_geometry_shared_types_ext.so.0.0.1' 'lib/mmtbx_geometry_shared_types_ext.so'->'lib/mmtbx_geometry_shared_types_ext.so.0.0.1' g++ -o mmtbx/hydrogens/hydrogens_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/mmtbx/hydrogens/hydrogens_ext.cpp Create symlinks for: 'lib/mmtbx_geometry_clash_ext.so.0.0.1' 'lib/mmtbx_geometry_clash_ext.so.0'->'lib/mmtbx_geometry_clash_ext.so.0.0.1' 'lib/mmtbx_geometry_clash_ext.so'->'lib/mmtbx_geometry_clash_ext.so.0.0.1' g++ -o mmtbx/masks/masks_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/mmtbx/masks/masks_ext.cpp g++ -o lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_sphere_surface_sampling_ext.so.0 mmtbx/geometry/boost_python/sphere_surface_sampling_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0.0.1' 'lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0'->'lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0.0.1' 'lib/mmtbx_geometry_sphere_surface_sampling_ext.so'->'lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0.0.1' g++ -o mmtbx/max_lik/max_lik_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/mmtbx/max_lik/max_lik_ext.cpp g++ -o lib/mmtbx_geometry_asa_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_asa_ext.so.0 mmtbx/geometry/boost_python/asa_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/mmtbx_hydrogens_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_hydrogens_ext.so.0 mmtbx/hydrogens/hydrogens_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_hydrogens_ext.so.0.0.1' 'lib/mmtbx_hydrogens_ext.so.0'->'lib/mmtbx_hydrogens_ext.so.0.0.1' 'lib/mmtbx_hydrogens_ext.so'->'lib/mmtbx_hydrogens_ext.so.0.0.1' g++ -o mmtbx/max_lik/max_lik.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/mmtbx/max_lik/max_lik.cpp g++ -o lib/mmtbx_masks_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_masks_ext.so.0 mmtbx/masks/masks_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lmmtbx_masks -lcctbx_sgtbx_asu -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_geometry_asa_ext.so.0.0.1' 'lib/mmtbx_geometry_asa_ext.so.0'->'lib/mmtbx_geometry_asa_ext.so.0.0.1' 'lib/mmtbx_geometry_asa_ext.so'->'lib/mmtbx_geometry_asa_ext.so.0.0.1' g++ -o mmtbx/bulk_solvent/mosaic_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/mmtbx/bulk_solvent/mosaic_ext.cpp Create symlinks for: 'lib/mmtbx_masks_ext.so.0.0.1' 'lib/mmtbx_masks_ext.so.0'->'lib/mmtbx_masks_ext.so.0.0.1' 'lib/mmtbx_masks_ext.so'->'lib/mmtbx_masks_ext.so.0.0.1' g++ -o mmtbx/ncs/cartesian_restraints_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/mmtbx/ncs/cartesian_restraints_ext.cpp g++ -o mmtbx/ncs/tncs_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/mmtbx/ncs/tncs_ext.cpp g++ -o lib/mmtbx_max_lik_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_max_lik_ext.so.0 mmtbx/max_lik/max_lik_ext.o mmtbx/max_lik/max_lik.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/mmtbx_mosaic_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_mosaic_ext.so.0 mmtbx/bulk_solvent/mosaic_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_max_lik_ext.so.0.0.1' 'lib/mmtbx_max_lik_ext.so.0'->'lib/mmtbx_max_lik_ext.so.0.0.1' 'lib/mmtbx_max_lik_ext.so'->'lib/mmtbx_max_lik_ext.so.0.0.1' g++ -o mmtbx/pair_interaction/interaction_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/mmtbx/pair_interaction/interaction_ext.cpp g++ -o lib/mmtbx_ncs_cartesian_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_ncs_cartesian_restraints_ext.so.0 mmtbx/ncs/cartesian_restraints_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_mosaic_ext.so.0.0.1' 'lib/mmtbx_mosaic_ext.so.0'->'lib/mmtbx_mosaic_ext.so.0.0.1' 'lib/mmtbx_mosaic_ext.so'->'lib/mmtbx_mosaic_ext.so.0.0.1' g++ -o mmtbx/probe/boost_python/probe_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/mmtbx/probe/boost_python/probe_bpl.cpp Create symlinks for: 'lib/mmtbx_ncs_cartesian_restraints_ext.so.0.0.1' 'lib/mmtbx_ncs_cartesian_restraints_ext.so.0'->'lib/mmtbx_ncs_cartesian_restraints_ext.so.0.0.1' 'lib/mmtbx_ncs_cartesian_restraints_ext.so'->'lib/mmtbx_ncs_cartesian_restraints_ext.so.0.0.1' g++ -o mmtbx/probe/Scoring.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/mmtbx/probe/Scoring.cpp g++ -o lib/mmtbx_ncs_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_ncs_ext.so.0 mmtbx/ncs/tncs_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_ncs_ext.so.0.0.1' 'lib/mmtbx_ncs_ext.so.0'->'lib/mmtbx_ncs_ext.so.0.0.1' 'lib/mmtbx_ncs_ext.so'->'lib/mmtbx_ncs_ext.so.0.0.1' g++ -o mmtbx/probe/DotSpheres.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/mmtbx/probe/DotSpheres.cpp g++ -o mmtbx/probe/SpatialQuery.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/mmtbx/probe/SpatialQuery.cpp g++ -o mmtbx/geometry_restraints/boost_python/ramachandran_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /<>/mmtbx/geometry_restraints/boost_python/ramachandran_ext.cpp g++ -o lib/mmtbx_pair_interaction_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_pair_interaction_ext.so.0 mmtbx/pair_interaction/interaction_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm ar rc probe/lib/libprobelib.a mmtbx/probe/Scoring.o mmtbx/probe/DotSpheres.o mmtbx/probe/SpatialQuery.o ranlib probe/lib/libprobelib.a g++ -o mmtbx/reduce/boost_python/reduce_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/mmtbx/reduce/boost_python/reduce_bpl.cpp In file included from /<>/cctbx/xray/scatterer.h:5, from /<>/cctbx/restraints.h:6, from /<>/cctbx/geometry_restraints/dihedral.h:6, from /<>/mmtbx/geometry_restraints/ramachandran.h:10, from /<>/mmtbx/geometry_restraints/boost_python/ramachandran_ext.cpp:11: /<>/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /<>/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i>/mmtbx/geometry_restraints/ramachandran.h: In instantiation of ‘scitbx::af::tiny mmtbx::geometry_restraints::target_phi_psi(const scitbx::af::const_ref, scitbx::af::trivial_accessor>&, const scitbx::af::const_ref, scitbx::af::trivial_accessor>&, const phi_psi_proxy&) [with FloatType = double]’: /<>/mmtbx/geometry_restraints/ramachandran.h:314:35: required from here /<>/mmtbx/geometry_restraints/ramachandran.h:269:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 269 | for(int i=0; i>/mmtbx/geometry_restraints/ramachandran.h:284:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 284 | for(int i=0; i>/cctbx/sgtbx/site_symmetry.h:6: /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:203:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:214:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/format/parsing.hpp:21, from /usr/include/boost/format.hpp:50, from /<>/cctbx/geometry_restraints/dihedral.h:8: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = mmtbx::geometry_restraints::phi_psi_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ /<>/mmtbx/geometry_restraints/boost_python/ramachandran_ext.cpp:52:75: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ Create symlinks for: 'lib/mmtbx_pair_interaction_ext.so.0.0.1' 'lib/mmtbx_pair_interaction_ext.so.0'->'lib/mmtbx_pair_interaction_ext.so.0.0.1' 'lib/mmtbx_pair_interaction_ext.so'->'lib/mmtbx_pair_interaction_ext.so.0.0.1' g++ -o mmtbx/reduce/PositionReturn.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/mmtbx/reduce/PositionReturn.cpp g++ -o mmtbx/reduce/InteractionGraph.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/mmtbx/reduce/InteractionGraph.cpp g++ -o lib/mmtbx_probe_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_probe_ext.so.0 mmtbx/probe/boost_python/probe_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -Lprobe/lib -L/<>/probe/lib -lprobelib -liotbx_pdb -lcctbx -lscitbx_boost_python -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_probe_ext.so.0.0.1' 'lib/mmtbx_probe_ext.so.0'->'lib/mmtbx_probe_ext.so.0.0.1' 'lib/mmtbx_probe_ext.so'->'lib/mmtbx_probe_ext.so.0.0.1' g++ -o mmtbx/reduce/Optimizers.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/mmtbx/reduce/Optimizers.cpp g++ -o lib/mmtbx_ramachandran_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_ramachandran_restraints_ext.so.0 mmtbx/geometry_restraints/boost_python/ramachandran_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /<>/mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.cpp Create symlinks for: 'lib/mmtbx_ramachandran_restraints_ext.so.0.0.1' 'lib/mmtbx_ramachandran_restraints_ext.so.0'->'lib/mmtbx_ramachandran_restraints_ext.so.0.0.1' 'lib/mmtbx_ramachandran_restraints_ext.so'->'lib/mmtbx_ramachandran_restraints_ext.so.0.0.1' g++ -o mmtbx/rotamer/fit_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/mmtbx/rotamer/fit_ext.cpp In file included from /<>/cctbx/sgtbx/wyckoff.h:4, from /<>/cctbx/sgtbx/sym_equiv_sites.h:5, from /<>/cctbx/crystal/direct_space_asu.h:4, from /<>/cctbx/geometry_restraints/asu_cache.h:4, from /<>/cctbx/geometry_restraints/bond.h:5, from /<>/mmtbx/geometry_restraints/reference_coordinate.h:2, from /<>/mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.cpp:13: /<>/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /<>/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i>/mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.cpp:14: /<>/cctbx/geometry_restraints/proxy_select.h: In instantiation of ‘scitbx::af::shared cctbx::geometry_restraints::shared_proxy_remove(const scitbx::af::const_ref&, const scitbx::af::const_ref&) [with ProxyType = mmtbx::geometry_restraints::reference_coordinate_proxy]’: /<>/mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.cpp:80:41: required from here /<>/cctbx/geometry_restraints/proxy_select.h:187:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 187 | if (match_ctr != i_seqs.size()) { | ~~~~~~~~~~^~~~~~~~~~~~~~~~ In file included from /<>/cctbx/sgtbx/site_symmetry.h:6: /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:203:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /<>/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /<>/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ /<>/cctbx/sgtbx/site_symmetry.h:214:75: required from here /<>/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /<>/cctbx/sgtbx/tensor_rank_2.h:9, from /<>/cctbx/sgtbx/site_symmetry.h:5: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = mmtbx::geometry_restraints::reference_coordinate_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ /<>/mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.cpp:61:25: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o lib/mmtbx_reference_coordinate_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_reference_coordinate_ext.so.0 mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/mmtbx_rotamer_fit_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_rotamer_fit_ext.so.0 mmtbx/rotamer/fit_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm ar rc reduce/lib/libreduce2lib.a mmtbx/reduce/PositionReturn.o mmtbx/reduce/InteractionGraph.o mmtbx/reduce/Optimizers.o ranlib reduce/lib/libreduce2lib.a Create symlinks for: 'lib/mmtbx_reference_coordinate_ext.so.0.0.1' 'lib/mmtbx_reference_coordinate_ext.so.0'->'lib/mmtbx_reference_coordinate_ext.so.0.0.1' 'lib/mmtbx_reference_coordinate_ext.so'->'lib/mmtbx_reference_coordinate_ext.so.0.0.1' g++ -o mmtbx/rsr/rsr_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/mmtbx/rsr/rsr_ext.cpp g++ -o mmtbx/scaling/scaling_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/mmtbx/scaling/scaling_ext.cpp Create symlinks for: 'lib/mmtbx_rotamer_fit_ext.so.0.0.1' 'lib/mmtbx_rotamer_fit_ext.so.0'->'lib/mmtbx_rotamer_fit_ext.so.0.0.1' 'lib/mmtbx_rotamer_fit_ext.so'->'lib/mmtbx_rotamer_fit_ext.so.0.0.1' g++ -o mmtbx/scaling/twinning_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/mmtbx/scaling/twinning_bpl.cpp g++ -o lib/mmtbx_reduce_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_reduce_ext.so.0 mmtbx/reduce/boost_python/reduce_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -Lreduce/lib -L/<>/reduce/lib -Lprobe/lib -L/<>/probe/lib -lreduce2lib -lprobelib -liotbx_pdb -lcctbx -lscitbx_boost_python -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/mmtbx_rsr_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_rsr_ext.so.0 mmtbx/rsr/rsr_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_reduce_ext.so.0.0.1' 'lib/mmtbx_reduce_ext.so.0'->'lib/mmtbx_reduce_ext.so.0.0.1' 'lib/mmtbx_reduce_ext.so'->'lib/mmtbx_reduce_ext.so.0.0.1' g++ -o mmtbx/scaling/relative_scaling_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/mmtbx/scaling/relative_scaling_bpl.cpp g++ -o mmtbx/scaling/outlier_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/mmtbx/scaling/outlier_bpl.cpp Create symlinks for: 'lib/mmtbx_rsr_ext.so.0.0.1' 'lib/mmtbx_rsr_ext.so.0'->'lib/mmtbx_rsr_ext.so.0.0.1' 'lib/mmtbx_rsr_ext.so'->'lib/mmtbx_rsr_ext.so.0.0.1' g++ -o mmtbx/secondary_structure/ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /<>/mmtbx/secondary_structure/ext.cpp g++ -o lib/mmtbx_secondary_structure_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_secondary_structure_ext.so.0 mmtbx/secondary_structure/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -liotbx_pdb -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_secondary_structure_ext.so.0.0.1' 'lib/mmtbx_secondary_structure_ext.so.0'->'lib/mmtbx_secondary_structure_ext.so.0.0.1' 'lib/mmtbx_secondary_structure_ext.so'->'lib/mmtbx_secondary_structure_ext.so.0.0.1' g++ -o mmtbx/tls/decompose_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/mmtbx/tls/decompose_ext.cpp g++ -o mmtbx/tls/tls_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/mmtbx/tls/tls_ext.cpp g++ -o mmtbx/tls/optimise_amplitudes.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/mmtbx/tls/optimise_amplitudes.cpp g++ -o lib/mmtbx_tls_decompose_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_tls_decompose_ext.so.0 mmtbx/tls/decompose_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lmmtbx_tls -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_tls_decompose_ext.so.0.0.1' 'lib/mmtbx_tls_decompose_ext.so.0'->'lib/mmtbx_tls_decompose_ext.so.0.0.1' 'lib/mmtbx_tls_decompose_ext.so'->'lib/mmtbx_tls_decompose_ext.so.0.0.1' g++ -o mmtbx/tls/optimise_amplitudes_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/mmtbx/tls/optimise_amplitudes_ext.cpp g++ -o mmtbx/tls/utils.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/mmtbx/tls/utils.cpp g++ -o lib/mmtbx_scaling_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_scaling_ext.so.0 mmtbx/scaling/scaling_ext.o mmtbx/scaling/twinning_bpl.o mmtbx/scaling/relative_scaling_bpl.o mmtbx/scaling/outlier_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/mmtbx_tls_optimise_amplitudes_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_tls_optimise_amplitudes_ext.so.0 mmtbx/tls/optimise_amplitudes.o mmtbx/tls/optimise_amplitudes_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lmmtbx_tls -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_scaling_ext.so.0.0.1' 'lib/mmtbx_scaling_ext.so.0'->'lib/mmtbx_scaling_ext.so.0.0.1' 'lib/mmtbx_scaling_ext.so'->'lib/mmtbx_scaling_ext.so.0.0.1' g++ -o mmtbx/tls/utils_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/mmtbx/tls/utils_ext.cpp Create symlinks for: 'lib/mmtbx_tls_optimise_amplitudes_ext.so.0.0.1' 'lib/mmtbx_tls_optimise_amplitudes_ext.so.0'->'lib/mmtbx_tls_optimise_amplitudes_ext.so.0.0.1' 'lib/mmtbx_tls_optimise_amplitudes_ext.so'->'lib/mmtbx_tls_optimise_amplitudes_ext.so.0.0.1' g++ -o mmtbx/utils/utils_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/mmtbx/utils/utils_ext.cpp g++ -o mmtbx/validation/ramachandran/rama_eval_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/mmtbx/validation/ramachandran/rama_eval_bpl.cpp g++ -o lib/mmtbx_tls_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_tls_ext.so.0 mmtbx/tls/tls_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lmmtbx_tls -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/mmtbx_validation_ramachandran_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_validation_ramachandran_ext.so.0 mmtbx/validation/ramachandran/rama_eval_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_tls_ext.so.0.0.1' 'lib/mmtbx_tls_ext.so.0'->'lib/mmtbx_tls_ext.so.0.0.1' 'lib/mmtbx_tls_ext.so'->'lib/mmtbx_tls_ext.so.0.0.1' g++ -o omptbx/ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/<> /<>/omptbx/ext.cpp g++ -o lib/mmtbx_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_utils_ext.so.0 mmtbx/utils/utils_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_validation_ramachandran_ext.so.0.0.1' 'lib/mmtbx_validation_ramachandran_ext.so.0'->'lib/mmtbx_validation_ramachandran_ext.so.0.0.1' 'lib/mmtbx_validation_ramachandran_ext.so'->'lib/mmtbx_validation_ramachandran_ext.so.0.0.1' g++ -o rstbx/array_family/ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/<>/dxtbx/src -Irstbx/src -I/<>/rstbx/src -Irstbx/include -I/<>/rstbx/include /<>/rstbx/array_family/ext.cpp g++ -o rstbx/array_family/flex_rstbx_arrays.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/<>/dxtbx/src -Irstbx/src -I/<>/rstbx/src -Irstbx/include -I/<>/rstbx/include /<>/rstbx/array_family/flex_rstbx_arrays.cpp g++ -o lib/omptbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=omptbx_ext.so.0 omptbx/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lomptbx -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_utils_ext.so.0.0.1' 'lib/mmtbx_utils_ext.so.0'->'lib/mmtbx_utils_ext.so.0.0.1' 'lib/mmtbx_utils_ext.so'->'lib/mmtbx_utils_ext.so.0.0.1' g++ -o rstbx/bandpass/ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/<>/dxtbx/src -Irstbx/bandpass/src -I/<>/rstbx/bandpass/src -Irstbx/bandpass/include -I/<>/rstbx/bandpass/include /<>/rstbx/bandpass/ext.cpp Create symlinks for: 'lib/omptbx_ext.so.0.0.1' 'lib/omptbx_ext.so.0'->'lib/omptbx_ext.so.0.0.1' 'lib/omptbx_ext.so'->'lib/omptbx_ext.so.0.0.1' g++ -o rstbx/bpcx/detector_model/detector_model_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/<>/dxtbx/src -Irstbx/bpcx/src -I/<>/rstbx/bpcx/src -Irstbx/bpcx/include -I/<>/rstbx/bpcx/include /<>/rstbx/bpcx/detector_model/detector_model_ext.cpp In file included from /<>/rstbx/bandpass/ext.cpp:10: /<>/rstbx/bandpass/parameters.h: In constructor ‘rstbx::bandpass::active_area_filter::active_area_filter(scitbx::af::shared)’: /<>/rstbx/bandpass/parameters.h:100:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i < tiles.size()/4; ++i){ | ~~^~~~~~~~~~~~~~~~ In file included from /<>/scitbx/error.h:16, from /<>/scitbx/array_family/ref.h:4, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/array_family/shared_plain.h:31, from /<>/scitbx/array_family/shared.h:4, from /<>/rstbx/bandpass/parameters.h:3: /<>/rstbx/bandpass/parameters.h: In member function ‘bool rstbx::bandpass::active_area_filter::operator()(rstbx::bandpass::vec3, const int&)’: /<>/rstbx/bandpass/parameters.h:126:39: warning: comparison of integer expressions of different signedness: ‘scitbx::af::versa_plain >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 126 | SCITBX_ASSERT( adapt.nn.size()== NEAR); | ~~~~~~~~~~~~~~~^~~~~~~ /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/rstbx/bandpass/parameters.h:126:9: note: in expansion of macro ‘SCITBX_ASSERT’ 126 | SCITBX_ASSERT( adapt.nn.size()== NEAR); | ^~~~~~~~~~~~~ In file included from /<>/rstbx/bandpass/ext.cpp:11: /<>/rstbx/bandpass/subpixel_joint_model.h: In member function ‘void rstbx::bandpass::subpixel_joint_model::set_subpixel(scitbx::af::shared, scitbx::af::shared)’: /<>/rstbx/bandpass/subpixel_joint_model.h:26:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 26 | for (int ixx=0; ixx< rotations_deg.size(); ++ixx){ | ~~~^~~~~~~~~~~~~~~~~~~~~~ /<>/rstbx/bandpass/subpixel_joint_model.h:31:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 31 | for (int ixx=0; ixx< rotations_deg.size(); ++ixx){ | ~~~^~~~~~~~~~~~~~~~~~~~~~ /<>/rstbx/bandpass/ext.cpp: In member function ‘void rstbx::bandpass::use_case_bp3::prescreen_indices(const double&)’: /<>/rstbx/bandpass/ext.cpp:46:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 46 | for (int idx = 0; idx < P.indices.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~ /<>/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared rstbx::bandpass::use_case_bp3::selected_partialities() const’: /<>/rstbx/bandpass/ext.cpp:93:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 93 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /<>/rstbx/bandpass/ext.cpp: In member function ‘void rstbx::bandpass::use_case_bp3::picture_fast_slow()’: /<>/rstbx/bandpass/ext.cpp:152:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 152 | for (int idx = 0; idx < P.indices.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~ /<>/rstbx/bandpass/ext.cpp: In member function ‘void rstbx::bandpass::use_case_bp3::picture_fast_slow_force()’: /<>/rstbx/bandpass/ext.cpp:296:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 296 | for (int idx = 0; idx < P.indices.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~ /<>/rstbx/bandpass/ext.cpp:462:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 462 | for ( int idx = 0; idx < P.indices.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~ /<>/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::spot_rectangles(rstbx::bandpass::vec3ref)’: /<>/rstbx/bandpass/ext.cpp:477:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 477 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /<>/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::spot_rectregions(rstbx::bandpass::vec3ref, const double&)’: /<>/rstbx/bandpass/ext.cpp:511:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 511 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /<>/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::enclosed_pixels() const’: /<>/rstbx/bandpass/ext.cpp:543:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 543 | for (int idx = 0; idx < spot_rectangle_vertices.size(); idx+=5){ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::selected_hi_predictions() const’: /<>/rstbx/bandpass/ext.cpp:752:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 752 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /<>/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::selected_lo_predictions() const’: /<>/rstbx/bandpass/ext.cpp:763:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 763 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /<>/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::selected_predictions() const’: /<>/rstbx/bandpass/ext.cpp:774:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 774 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /<>/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::selected_predictions_labelit_format() const’: /<>/rstbx/bandpass/ext.cpp:787:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 787 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /<>/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::selected_hkls() const’: /<>/rstbx/bandpass/ext.cpp:802:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 802 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /<>/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::restricted_to_active_areas(scitbx::af::shared, scitbx::af::shared >) const’: /<>/rstbx/bandpass/ext.cpp:815:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 815 | for (int idx = 0; idx < active_areas.size(); idx+=4){ | ~~~~^~~~~~~~~~~~~~~~~~~~~ /<>/rstbx/bandpass/ext.cpp: In member function ‘void rstbx::bandpass::use_case_bp3::set_subpixel(scitbx::af::shared, scitbx::af::shared)’: /<>/rstbx/bandpass/ext.cpp:828:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 828 | for (int ixx=0; ixx< rotations_deg.size(); ++ixx){ //DEPRECATED | ~~~^~~~~~~~~~~~~~~~~~~~~~ /<>/rstbx/bandpass/ext.cpp: In function ‘scitbx::af::shared > rstbx::bandpass::ext::use_case_bp2_picture_fast_slow(scitbx::af::shared >, const cctbx::crystal_orientation&, const scitbx::vec3&, const double&, const scitbx::vec3&, const scitbx::vec3&, const scitbx::vec3&, const scitbx::vec3&, const scitbx::vec3&, const double&, const scitbx::vec3&, const double&)’: /<>/rstbx/bandpass/ext.cpp:933:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 933 | for (int idx = 0; idx < indices.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~ /<>/rstbx/bandpass/ext.cpp: In instantiation of ‘void rstbx::bandpass::use_case_bp3::enclosed_pixels_and_margin_pixels_detail() [with pixel_accept_policy = resolution_limited_pixel_accept_policy]’: /<>/rstbx/bandpass/ext.cpp:616:87: required from here /<>/rstbx/bandpass/ext.cpp:631:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 631 | for (int idx = 0; idx < spot_rectangle_vertices.size(); idx+=5){ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/rstbx/bandpass/ext.cpp: In instantiation of ‘void rstbx::bandpass::use_case_bp3::enclosed_pixels_and_margin_pixels_detail() [with pixel_accept_policy = unlimited_pixel_accept_policy]’: /<>/rstbx/bandpass/ext.cpp:620:78: required from here /<>/rstbx/bandpass/ext.cpp:631:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] g++ -o rstbx/bpcx/detector_model/sensor.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/<>/dxtbx/src -Irstbx/bpcx/src -I/<>/rstbx/bpcx/src -Irstbx/bpcx/include -I/<>/rstbx/bpcx/include /<>/rstbx/bpcx/detector_model/sensor.cpp In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/vec2.h:4, from /<>/rstbx/bpcx/detector_model/sensor.h:3, from /<>/rstbx/bpcx/detector_model/sensor.cpp:2: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘scitbx::af::shared_plain >::shared_plain(unsigned long const&)’: /<>/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/memory:69, from /usr/include/boost/config/no_tr1/memory.hpp:21, from /usr/include/boost/get_pointer.hpp:14, from /usr/include/boost/python/object/pointer_holder.hpp:11, from /usr/include/boost/python/to_python_indirect.hpp:10, from /usr/include/boost/python/converter/arg_to_python.hpp:10, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /usr/include/boost/python/scope.hpp:9, from /<>/rstbx/bandpass/ext.cpp:4: /usr/include/c++/13/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const struct vec3 &’ to ‘std::uninitialized_fill_n*, unsigned long, scitbx::vec3 >(scitbx::vec3*, unsigned long, scitbx::vec3 const&)scitbx::vec3* [clone .isra.0]’ declared here 312 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ g++ -o lib/rstbx_bpcx_detector_model_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_bpcx_detector_model_ext.so.0 rstbx/bpcx/detector_model/detector_model_ext.o rstbx/bpcx/detector_model/sensor.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/rstbx_bpcx_detector_model_ext.so.0.0.1' 'lib/rstbx_bpcx_detector_model_ext.so.0'->'lib/rstbx_bpcx_detector_model_ext.so.0.0.1' 'lib/rstbx_bpcx_detector_model_ext.so'->'lib/rstbx_bpcx_detector_model_ext.so.0.0.1' g++ -o rstbx/diffraction/fastbragg/fastbragg_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/<>/dxtbx/src -Irstbx/diffraction/fastbragg/src -I/<>/rstbx/diffraction/fastbragg/src -Irstbx/diffraction/fastbragg/include -I/<>/rstbx/diffraction/fastbragg/include /<>/rstbx/diffraction/fastbragg/fastbragg_ext.cpp g++ -o lib/mmtbx_tls_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_tls_utils_ext.so.0 mmtbx/tls/utils.o mmtbx/tls/utils_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lmmtbx_tls -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm In file included from /<>/rstbx/diffraction/fastbragg/fastbragg_ext.cpp:10: /<>/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘scitbx::af::versa > rstbx::diffraction::fastbragg::detector::intdata()’: /<>/rstbx/diffraction/fastbragg/fastbragg.h:89:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::versa_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int count = 0; count < raw.size(); ++count){ | ~~~~~~^~~~~~~~~~~~ In file included from /<>/scitbx/error.h:16, from /<>/scitbx/array_family/ref.h:4, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/vec3.h:4, from /<>/rstbx/diffraction/fastbragg/fastbragg.h:8: /<>/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘scitbx::af::shared rstbx::diffraction::fastbragg::camera::get_wavelengths() const’: /<>/rstbx/diffraction/fastbragg/fastbragg.h:133:32: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 133 | SCITBX_ASSERT(result.size()==dispsteps); | ~~~~~~~~~~~~~^~~~~~~~~~~ /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/rstbx/diffraction/fastbragg/fastbragg.h:133:5: note: in expansion of macro ‘SCITBX_ASSERT’ 133 | SCITBX_ASSERT(result.size()==dispsteps); | ^~~~~~~~~~~~~ /<>/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘std::map, double> rstbx::diffraction::fastbragg::crystal::get_amplitude_mapping() const’: /<>/rstbx/diffraction/fastbragg/fastbragg.h:176:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 176 | for (int i = 0; i < miller.size(); ++i){ | ~~^~~~~~~~~~~~~~~ /<>/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘void rstbx::diffraction::fastbragg::fast_bragg_simulation::sweep_over_detector(const bool&)’: /<>/rstbx/diffraction/fastbragg/fastbragg.h:305:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 305 | for(int i_lambda=0; i_lambda < lambdas.size(); ++i_lambda){ | ~~~~~~~~~^~~~~~~~~~~~~~~~ /<>/rstbx/diffraction/fastbragg/fastbragg.h: In instantiation of ‘scitbx::af::shared rstbx::diffraction::fastbragg::fast_bragg_simulation::sweep_over_detector_get_indices(const bool&) [with IndexType = scitbx::vec3; MillerConversionPolicy = rstbx::diffraction::fastbragg::vec3_double_miller_index_policy]’: /<>/rstbx/diffraction/fastbragg/fastbragg_ext.cpp:134:11: required from here /<>/rstbx/diffraction/fastbragg/fastbragg.h:456:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 456 | for(int i_lambda=0; i_lambda < lambdas.size(); ++i_lambda){ | ~~~~~~~~~^~~~~~~~~~~~~~~~ /<>/rstbx/diffraction/fastbragg/fastbragg.h: In instantiation of ‘scitbx::af::shared rstbx::diffraction::fastbragg::fast_bragg_simulation::sweep_over_detector_get_indices(const bool&) [with IndexType = cctbx::miller::index<>; MillerConversionPolicy = rstbx::diffraction::fastbragg::integer_miller_index_policy]’: /<>/rstbx/diffraction/fastbragg/fastbragg_ext.cpp:138:11: required from here /<>/rstbx/diffraction/fastbragg/fastbragg.h:456:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] g++ -o lib/rstbx_bandpass_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_bandpass_ext.so.0 rstbx/bandpass/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lann-cctbx -lann_adaptor -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/rstbx_bandpass_ext.so.0.0.1' 'lib/rstbx_bandpass_ext.so.0'->'lib/rstbx_bandpass_ext.so.0.0.1' 'lib/rstbx_bandpass_ext.so'->'lib/rstbx_bandpass_ext.so.0.0.1' g++ -o rstbx/diffraction/fastbragg/fastbragg.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/<>/dxtbx/src -Irstbx/diffraction/fastbragg/src -I/<>/rstbx/diffraction/fastbragg/src -Irstbx/diffraction/fastbragg/include -I/<>/rstbx/diffraction/fastbragg/include /<>/rstbx/diffraction/fastbragg/fastbragg.cpp Create symlinks for: 'lib/mmtbx_tls_utils_ext.so.0.0.1' 'lib/mmtbx_tls_utils_ext.so.0'->'lib/mmtbx_tls_utils_ext.so.0.0.1' 'lib/mmtbx_tls_utils_ext.so'->'lib/mmtbx_tls_utils_ext.so.0.0.1' g++ -o rstbx/ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/<>/dxtbx/src -Irstbx/src -I/<>/rstbx/src -Irstbx/include -I/<>/rstbx/include /<>/rstbx/ext.cpp In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/vec3.h:4, from /<>/rstbx/diffraction/fastbragg/fastbragg.h:8, from /<>/rstbx/diffraction/fastbragg/fastbragg.cpp:1: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘scitbx::af::versa > rstbx::diffraction::fastbragg::detector::intdata()’: /<>/rstbx/diffraction/fastbragg/fastbragg.h:89:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::versa_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int count = 0; count < raw.size(); ++count){ | ~~~~~~^~~~~~~~~~~~ In file included from /<>/scitbx/error.h:16, from /<>/scitbx/array_family/ref.h:4: /<>/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘scitbx::af::shared rstbx::diffraction::fastbragg::camera::get_wavelengths() const’: /<>/rstbx/diffraction/fastbragg/fastbragg.h:133:32: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 133 | SCITBX_ASSERT(result.size()==dispsteps); | ~~~~~~~~~~~~~^~~~~~~~~~~ /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/rstbx/diffraction/fastbragg/fastbragg.h:133:5: note: in expansion of macro ‘SCITBX_ASSERT’ 133 | SCITBX_ASSERT(result.size()==dispsteps); | ^~~~~~~~~~~~~ /<>/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘std::map, double> rstbx::diffraction::fastbragg::crystal::get_amplitude_mapping() const’: /<>/rstbx/diffraction/fastbragg/fastbragg.h:176:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 176 | for (int i = 0; i < miller.size(); ++i){ | ~~^~~~~~~~~~~~~~~ /<>/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘void rstbx::diffraction::fastbragg::fast_bragg_simulation::sweep_over_detector(const bool&)’: /<>/rstbx/diffraction/fastbragg/fastbragg.h:305:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 305 | for(int i_lambda=0; i_lambda < lambdas.size(); ++i_lambda){ | ~~~~~~~~~^~~~~~~~~~~~~~~~ g++ -o rstbx/indexing_api/ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/<>/dxtbx/src -Irstbx/indexing_api/src -I/<>/rstbx/indexing_api/src -Irstbx/indexing_api/include -I/<>/rstbx/indexing_api/include /<>/rstbx/indexing_api/ext.cpp g++ -o lib/rstbx_diffraction_fastbragg_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_diffraction_fastbragg_ext.so.0 rstbx/diffraction/fastbragg/fastbragg_ext.o rstbx/diffraction/fastbragg/fastbragg.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm In file included from /<>/scitbx/fftpack/real_to_complex.h:4, from /<>/rstbx/dps_core/directional_fft.h:5, from /<>/rstbx/dps_core/dps_core.h:11, from /<>/rstbx/indexing_api/indexing_api.h:9, from /<>/rstbx/indexing_api/ext.cpp:4: /<>/scitbx/fftpack/factorization.h: In constructor ‘scitbx::fftpack::factorization::factorization(std::size_t, bool)’: /<>/scitbx/fftpack/factorization.h:64:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (i = 0; red_n > 1 && i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ /<>/scitbx/fftpack/factorization.h:67:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 67 | for (i = 0; i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ In file included from /<>/dxtbx/src/dxtbx/model/panel.h:22, from /<>/dxtbx/src/dxtbx/model/detector.h:25, from /<>/rstbx/indexing_api/indexing_api.h:11: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /<>/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /<>/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /<>/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /<>/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ /<>/rstbx/indexing_api/ext.cpp: In member function ‘void indexing_api::rayleigh_cpp::estimate_parameters_from_cdf(scitbx::af::shared, scitbx::af::shared)’: /<>/rstbx/indexing_api/ext.cpp:59:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 59 | for (int i=0; i < x_data.size(); ++i){ | ~~^~~~~~~~~~~~~~~ /<>/rstbx/indexing_api/ext.cpp: In member function ‘scitbx::af::shared indexing_api::rayleigh_cpp::pdf(scitbx::af::shared)’: /<>/rstbx/indexing_api/ext.cpp:80:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 80 | for (int i = 0; i < x.size(); ++i){ | ~~^~~~~~~~~~ /<>/rstbx/indexing_api/ext.cpp: In member function ‘scitbx::af::shared indexing_api::rayleigh_cpp::cdf(scitbx::af::shared)’: /<>/rstbx/indexing_api/ext.cpp:96:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 96 | for (int i = 0; i < x.size(); ++i){ | ~~^~~~~~~~~~ /<>/rstbx/indexing_api/ext.cpp: In member function ‘scitbx::af::shared indexing_api::rayleigh_cpp::d_cdf_d_sigma(scitbx::af::shared)’: /<>/rstbx/indexing_api/ext.cpp:113:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 113 | for (int i = 0; i < x.size(); ++i){ | ~~^~~~~~~~~~ /<>/rstbx/indexing_api/ext.cpp: In member function ‘scitbx::af::shared indexing_api::rayleigh_cpp::gradients(scitbx::af::shared, const int&, scitbx::af::shared)’: /<>/rstbx/indexing_api/ext.cpp:129:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 129 | for (int i = 0; i < x.size(); ++i){ | ~~^~~~~~~~~~ /<>/rstbx/indexing_api/ext.cpp:135:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 135 | for (int i = 0; i < gradients.size(); ++i){ | ~~^~~~~~~~~~~~~~~~~~ Create symlinks for: 'lib/rstbx_diffraction_fastbragg_ext.so.0.0.1' 'lib/rstbx_diffraction_fastbragg_ext.so.0'->'lib/rstbx_diffraction_fastbragg_ext.so.0.0.1' 'lib/rstbx_diffraction_fastbragg_ext.so'->'lib/rstbx_diffraction_fastbragg_ext.so.0.0.1' g++ -o rstbx/apps/integration_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/<>/dxtbx/src -Irstbx/apps/src -I/<>/rstbx/apps/src -Irstbx/apps/include -I/<>/rstbx/apps/include /<>/rstbx/apps/integration_ext.cpp g++ -o lib/rstbx_array_family_flex_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_array_family_flex_ext.so.0 rstbx/array_family/ext.o rstbx/array_family/flex_rstbx_arrays.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/rstbx_indexing_api_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_indexing_api_ext.so.0 rstbx/indexing_api/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm In file included from /<>/spotfinder/core_toolbox/libdistl.h:81, from /<>/spotfinder/core_toolbox/distl.h:14, from /<>/rstbx/apps/stills/simple_integration.h:9, from /<>/rstbx/apps/integration_ext.cpp:3: /<>/iotbx/detectors/scanbox.h: In member function ‘Distl::interval_list Distl::scanbox_tiling_explicit::generate_defined_x_tiles(const int&)’: /<>/iotbx/detectors/scanbox.h:268:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 268 | for (int tile = 0 ; tile < tile_count; ++tile){ | ~~~~~^~~~~~~~~~~~ /<>/rstbx/apps/stills/simple_integration.h: In member function ‘void rstbx::integration::simple_integration::append_ISmask(scitbx::af::shared)’: /<>/rstbx/apps/stills/simple_integration.h:222:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 222 | for (int i=0; i < mask.size(); i+=2){ | ~~^~~~~~~~~~~~~ /<>/rstbx/apps/stills/simple_integration.h: In member function ‘void rstbx::integration::simple_integration::positional_correction_mapping(scitbx::af::shared >, scitbx::af::shared >, const annlib_adaptbx::AnnAdaptor&, const annlib_adaptbx::AnnAdaptor&, scitbx::af::shared)’: /<>/rstbx/apps/stills/simple_integration.h:273:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 273 | for (int i=0; i>/rstbx/apps/stills/simple_integration.h:287:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 287 | for (int p=0; p>/rstbx/apps/stills/simple_integration.h: In member function ‘void rstbx::integration::simple_integration::null_correction_mapping(scitbx::af::shared >, scitbx::af::shared >, const annlib_adaptbx::AnnAdaptor&, scitbx::af::shared)’: /<>/rstbx/apps/stills/simple_integration.h:310:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 310 | for (int i=0; i>/rstbx/apps/stills/simple_integration.h:320:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 320 | for (int p=0; p>/rstbx/apps/stills/simple_integration.h: In member function ‘scitbx::af::shared > rstbx::integration::simple_integration::safe_background(const scitbx::af::flex_int&, scitbx::af::shared >, const annlib_adaptbx::AnnAdaptor&, scitbx::af::shared)’: /<>/rstbx/apps/stills/simple_integration.h:366:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 366 | for (int isort=0; isort>/rstbx/apps/stills/simple_integration.h:378:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 378 | for (int isort=0; isort>/rstbx/apps/stills/simple_integration.h:395:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 395 | for (int i=0; i>/rstbx/apps/stills/simple_integration.h:495:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 495 | for (int isort=0; isort>/rstbx/apps/stills/simple_integration.h:550:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 550 | for (int i=0; i>/rstbx/apps/stills/simple_integration.h: In member function ‘void rstbx::integration::simple_integration::integration_proper_fast(const scitbx::af::flex_int&, scitbx::af::shared >, scitbx::af::shared >, scitbx::af::shared >)’: /<>/rstbx/apps/stills/simple_integration.h:575:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 575 | for (int i=0; i>/rstbx/apps/stills/simple_integration.h:631:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 631 | for (int k=0; k>/rstbx/apps/stills/simple_integration.h:638:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 638 | for (int k=0; k'lib/rstbx_array_family_flex_ext.so.0.0.1' 'lib/rstbx_array_family_flex_ext.so'->'lib/rstbx_array_family_flex_ext.so.0.0.1' g++ -o rstbx/simage/ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/<>/dxtbx/src -Irstbx/simage/src -I/<>/rstbx/simage/src -Irstbx/simage/include -I/<>/rstbx/simage/include /<>/rstbx/simage/ext.cpp Create symlinks for: 'lib/rstbx_indexing_api_ext.so.0.0.1' 'lib/rstbx_indexing_api_ext.so.0'->'lib/rstbx_indexing_api_ext.so.0.0.1' 'lib/rstbx_indexing_api_ext.so'->'lib/rstbx_indexing_api_ext.so.0.0.1' g++ -o rstbx/simulation/ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/<>/dxtbx/src -Irstbx/simulation/src -I/<>/rstbx/simulation/src -Irstbx/simulation/include -I/<>/rstbx/simulation/include /<>/rstbx/simulation/ext.cpp In file included from /<>/rstbx/simage/ext.cpp:2: /<>/rstbx/simage/image_simple.hpp: In member function ‘rstbx::simage::image_simple& rstbx::simage::image_simple::compute(const cctbx::uctbx::unit_cell&, const scitbx::af::const_ref >&, const scitbx::af::const_ref&, const scitbx::mat3&, double, double, int, double, scitbx::vec2, scitbx::vec2, unsigned int, double)’: /<>/rstbx/simage/image_simple.hpp:144:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 144 | for(int i=0;i<=point_spread;i++) { | ~^~~~~~~~~~~~~~ /<>/rstbx/simage/image_simple.hpp:148:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 148 | for(int j=0;j<=point_spread;j++) { | ~^~~~~~~~~~~~~~ In file included from /<>/rstbx/simage/image_simple.hpp:10: /<>/rstbx/simage/ext.cpp: In function ‘std::string rstbx::simage::ext::combine_rgb_images(const boost::python::list&)’: /<>/rstbx/simage/ext.cpp:58:42: warning: comparison of integer expressions of different signedness: ‘boost::python::ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 58 | TBXX_ASSERT(bp::len(rgb_images[j]) == img_size); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /<>/tbxx/error_utils.hpp:59:9: note: in definition of macro ‘TBXX_ASSERT’ 59 | if (!(condition)) { \ | ^~~~~~~~~ g++ -o lib/rstbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_ext.so.0 rstbx/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm In file included from /<>/rstbx/simulation/ext.cpp:11: /<>/rstbx/simulation/sim_xfel1.h: In member function ‘scitbx::af::shared rstbx::xfel1::select_proximal_indices(const int&, const double&, const double&, const cctbx::crystal_orientation&, const double&, const double&, const double&, const double&)’: /<>/rstbx/simulation/sim_xfel1.h:113:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 113 | for (int x = 0; x < indices_all.size(); ++x){ | ~~^~~~~~~~~~~~~~~~~~~~ /<>/rstbx/simulation/sim_xfel1.h: In member function ‘scitbx::af::versa > rstbx::xfel1::raw_diffraction(scitbx::af::shared, scitbx::af::versa >, const size_t&, const double&, const double&, const double&)’: /<>/rstbx/simulation/sim_xfel1.h:178:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 178 | for (int mcount=0; mcount>/rstbx/simulation/sim_xfel1.h:230:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 230 | for (int isel = 0; isel < selected.size(); ++isel){ | ~~~~~^~~~~~~~~~~~~~~~~ /<>/rstbx/simulation/sim_xfel1.h:231:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 231 | for (int imos = 0; imos < mosaic_perturbations.size(); ++imos){ | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o lib/rstbx_integration_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_integration_ext.so.0 rstbx/apps/integration_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lann-cctbx -lann_adaptor -lspotfinder -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm In file included from /<>/scitbx/array_family/shared_plain.h:307, from /<>/scitbx/array_family/versa_plain.h:5, from /<>/scitbx/array_family/versa.h:4, from /<>/scitbx/array_family/flex_types.h:7, from /<>/rstbx/simulation/sim_xfel1.h:4: /<>/scitbx/array_family/detail/push_back_etc.h: In member function ‘scitbx::af::shared_plain >::resize(unsigned long const&)’: /<>/scitbx/array_family/detail/push_back_etc.h:175:15: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 175 | resize(new_size, ElementType()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const struct vec3 &’ to ‘scitbx::af::shared_plain >::resize(unsigned long const&, scitbx::vec3 const&) [clone .isra.0]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /<>/scitbx/array_family/detail/push_back_etc.h:175:26: note: ‘’ declared here 175 | resize(new_size, ElementType()); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/detail/push_back_etc.h: In member function ‘scitbx::af::shared_plain::resize(unsigned long const&)’: /<>/scitbx/array_family/detail/push_back_etc.h:175:15: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 175 | resize(new_size, ElementType()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const struct crystal_orientation &’ to ‘scitbx::af::shared_plain::resize(unsigned long const&, cctbx::crystal_orientation const&) [clone .isra.0]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /<>/scitbx/array_family/detail/push_back_etc.h:175:26: note: ‘’ declared here 175 | resize(new_size, ElementType()); | ^~~~~~~~~~~~~ Create symlinks for: 'lib/rstbx_ext.so.0.0.1' 'lib/rstbx_ext.so.0'->'lib/rstbx_ext.so.0.0.1' 'lib/rstbx_ext.so'->'lib/rstbx_ext.so.0.0.1' g++ -o rstbx/symmetry/constraints/ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/<>/dxtbx/src -Irstbx/symmetry/constraints/src -I/<>/rstbx/symmetry/constraints/src -Irstbx/symmetry/constraints/include -I/<>/rstbx/symmetry/constraints/include /<>/rstbx/symmetry/constraints/ext.cpp Create symlinks for: 'lib/rstbx_integration_ext.so.0.0.1' 'lib/rstbx_integration_ext.so.0'->'lib/rstbx_integration_ext.so.0.0.1' 'lib/rstbx_integration_ext.so'->'lib/rstbx_integration_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/flex_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/array_family/boost_python/flex_ext.cpp g++ -o lib/rstbx_simage_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_simage_ext.so.0 rstbx/simage/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/rstbx_simulation_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_simulation_ext.so.0 rstbx/simulation/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/rstbx_simage_ext.so.0.0.1' 'lib/rstbx_simage_ext.so.0'->'lib/rstbx_simage_ext.so.0.0.1' 'lib/rstbx_simage_ext.so'->'lib/rstbx_simage_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/flex_grid.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/array_family/boost_python/flex_grid.cpp /<>/scitbx/array_family/boost_python/flex_ext.cpp: In member function ‘const char* scitbx::af::boost_python::cost_of_m_handle_in_af_shared::operator()(unsigned int, unsigned int)’: /<>/scitbx/array_family/boost_python/flex_ext.cpp:367:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 367 | for(int n=0; n < n_repeats; ++n) { | ~~^~~~~~~~~~~ /<>/scitbx/array_family/boost_python/flex_ext.cpp:375:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 375 | for(int n=0; n < n_repeats; ++n) { | ~~^~~~~~~~~~~ /<>/scitbx/array_family/boost_python/flex_ext.cpp:383:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 383 | for(int n=0; n < n_repeats; ++n) { | ~~^~~~~~~~~~~ In file included from /<>/scitbx/error.h:16, from /<>/scitbx/array_family/ref.h:4, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/array_family/shared_plain.h:31, from /<>/scitbx/array_family/shared.h:4, from /<>/scitbx/array_family/selections.h:4, from /<>/scitbx/array_family/boost_python/flex_ext.cpp:2: /<>/scitbx/array_family/selections.h: In instantiation of ‘scitbx::af::shared scitbx::af::reindexing_array(std::size_t, const const_ref&) [with IntType = int; std::size_t = long unsigned int]’: /<>/scitbx/array_family/boost_python/flex_ext.cpp:544:7: required from here /<>/scitbx/array_family/selections.h:156:35: warning: comparison of integer expressions of different signedness: ‘const int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 156 | SCITBX_ASSERT(iselection[i] < selectee_size); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/selections.h:156:7: note: in expansion of macro ‘SCITBX_ASSERT’ 156 | SCITBX_ASSERT(iselection[i] < selectee_size); | ^~~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_ptr.hpp:25, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /<>/scitbx/array_family/boost_python/c_grid_flex_conversions.h:10, from /<>/scitbx/array_family/boost_python/flex_ext.cpp:10: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:84:46: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:85:45: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:86:36: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:87:36: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:88:36: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:89:36: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:90:37: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:91:39: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:92:39: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:93:39: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:94:39: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:95:39: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 2>]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:96:53: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 3>]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:97:53: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 4>]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:98:53: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:100:50: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:101:51: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:102:55: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:103:55: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:104:55: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:105:58: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:106:53: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:107:53: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:108:53: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:110:54: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:112:46: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:113:46: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:115:49: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:117:50: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:118:50: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:119:50: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:120:50: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:122:53: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:123:53: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:124:53: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec3]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:127:51: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec3]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:128:52: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec3]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:129:42: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::mat3]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:130:42: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec3]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:131:45: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec3 >]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:132:63: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] Create symlinks for: 'lib/rstbx_simulation_ext.so.0.0.1' 'lib/rstbx_simulation_ext.so.0'->'lib/rstbx_simulation_ext.so.0.0.1' 'lib/rstbx_simulation_ext.so'->'lib/rstbx_simulation_ext.so.0.0.1' /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::mat3]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:133:45: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::sym_mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::sym_mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::sym_mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::sym_mat3]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:134:49: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec2]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:135:51: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec2]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:136:52: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec2]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:137:42: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::mat2]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:138:42: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec2]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:139:45: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::mat2]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:140:45: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::sym_mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::sym_mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::sym_mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::sym_mat2]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:141:49: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec3 >]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:143:60: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::mat3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::mat3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::mat3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::mat3 >]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:144:60: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 2>]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:146:54: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 3>]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:147:54: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] g++ -o scitbx/array_family/boost_python/flex_bool.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/array_family/boost_python/flex_bool.cpp /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 4>]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:148:54: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 2>]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:149:54: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 3>]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:150:54: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 4>]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:151:54: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:153:64: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small, 3>]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:154:56: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small, 2>]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:155:56: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small, 6>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small, 6>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small, 6>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small, 6>]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:156:59: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small, 7>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small, 7>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small, 7>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small, 7>]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:157:59: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small, 8>]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:158:59: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small, 8>]’ /<>/scitbx/array_family/boost_python/flex_ext.cpp:159:59: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] g++ -o lib/rstbx_symmetry_constraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_symmetry_constraints_ext.so.0 rstbx/symmetry/constraints/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm In file included from /<>/scitbx/error.h:16, from /<>/scitbx/array_family/accessors/flex_grid.h:4, from /<>/scitbx/array_family/flex_types.h:6, from /<>/scitbx/array_family/boost_python/flex_wrapper.h:15, from /<>/scitbx/array_family/boost_python/flex_bool.cpp:1: /<>/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /<>/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ Create symlinks for: 'lib/rstbx_symmetry_constraints_ext.so.0.0.1' 'lib/rstbx_symmetry_constraints_ext.so.0'->'lib/rstbx_symmetry_constraints_ext.so.0.0.1' 'lib/rstbx_symmetry_constraints_ext.so'->'lib/rstbx_symmetry_constraints_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/flex_size_t.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/array_family/boost_python/flex_size_t.cpp /<>/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = bool]’: /<>/scitbx/array_family/boost_python/flex_bool.cpp:429:8: required from here /<>/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = bool]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_function.h:1438, from /usr/include/c++/13/functional:49, from /usr/include/boost/config/no_tr1/functional.hpp:21, from /usr/include/boost/function/detail/prologue.hpp:15, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /<>/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/13/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /<>/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = bool]’: /<>/scitbx/array_family/boost_python/flex_bool.cpp:430:8: required from here /<>/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = bool]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ In file included from /usr/include/c++/13/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /<>/scitbx/array_family/ref_reductions.h:8, from /<>/scitbx/array_family/tiny.h:5, from /<>/scitbx/array_family/small_plain.h:4, from /<>/scitbx/array_family/small.h:4, from /<>/scitbx/array_family/accessors/flex_grid.h:5: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_bool.cpp:367:15: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_bool.cpp:367:15: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] In file included from /<>/scitbx/array_family/boost_python/flex_wrapper.h:18: /<>/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = bool]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_bool.cpp:367:15: required from here /<>/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = bool]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_bool.cpp:367:15: required from here /<>/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = bool]’: /<>/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = bool]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_bool.cpp:367:15: required from here /<>/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /<>/scitbx/error.h:16, from /<>/scitbx/array_family/accessors/flex_grid.h:4, from /<>/scitbx/array_family/flex_types.h:6, from /<>/scitbx/array_family/boost_python/flex_wrapper.h:15, from /<>/scitbx/array_family/boost_python/flex_size_t.cpp:1: /<>/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /<>/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ g++ -o scitbx/array_family/boost_python/flex_int.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/array_family/boost_python/flex_int.cpp /<>/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = long unsigned int]’: /<>/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here /<>/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = unsigned char]’: /<>/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here /<>/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = short unsigned int]’: /<>/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here /<>/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = unsigned int]’: /<>/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here /<>/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = long unsigned int]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here /<>/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = long unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_function.h:1438, from /usr/include/c++/13/functional:49, from /usr/include/boost/config/no_tr1/functional.hpp:21, from /usr/include/boost/function/detail/prologue.hpp:15, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /<>/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/13/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /<>/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = long unsigned int]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here /<>/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = long unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /<>/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = unsigned char]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here /<>/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = unsigned char]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /<>/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = unsigned char]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here /<>/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = unsigned char]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /<>/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = short unsigned int]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here /<>/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = short unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /<>/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = short unsigned int]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here /<>/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = short unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /<>/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = unsigned int]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here /<>/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /<>/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = unsigned int]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here /<>/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ In file included from /usr/include/c++/13/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /<>/scitbx/array_family/ref_reductions.h:8, from /<>/scitbx/array_family/tiny.h:5, from /<>/scitbx/array_family/small_plain.h:4, from /<>/scitbx/array_family/small.h:4, from /<>/scitbx/array_family/accessors/flex_grid.h:5: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] In file included from /<>/scitbx/array_family/boost_python/flex_wrapper.h:18: /<>/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = long unsigned int]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here /<>/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = long unsigned int]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here /<>/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = unsigned char]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here /<>/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = unsigned char]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here /<>/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = short unsigned int]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here /<>/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = short unsigned int]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here /<>/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = unsigned int]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here /<>/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = unsigned int]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here /<>/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = long unsigned int]’: /<>/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = long unsigned int]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here /<>/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; /<>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = unsigned char]’: /<>/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = unsigned char]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here /<>/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] /<>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = short unsigned int]’: /<>/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = short unsigned int]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here /<>/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] /<>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = unsigned int]’: /<>/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = unsigned int]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here /<>/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] In file included from /<>/scitbx/error.h:16, from /<>/scitbx/array_family/accessors/flex_grid.h:4, from /<>/scitbx/array_family/flex_types.h:6, from /<>/scitbx/array_family/boost_python/flex_wrapper.h:15, from /<>/scitbx/array_family/boost_python/flex_int.cpp:1: /<>/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /<>/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = int]’: /<>/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here /<>/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = long int]’: /<>/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here /<>/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = signed char]’: /<>/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here /<>/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = short int]’: /<>/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here /<>/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = int]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here /<>/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_function.h:1438, from /usr/include/c++/13/functional:49, from /usr/include/boost/config/no_tr1/functional.hpp:21, from /usr/include/boost/function/detail/prologue.hpp:15, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /<>/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/13/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /<>/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = int]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here /<>/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /<>/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = long int]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here /<>/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = long int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /<>/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = long int]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here /<>/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = long int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /<>/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = signed char]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here /<>/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = signed char]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /<>/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = signed char]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here /<>/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = signed char]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /<>/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = short int]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here /<>/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = short int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /<>/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = short int]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here /<>/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = short int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ In file included from /usr/include/c++/13/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /<>/scitbx/array_family/ref_reductions.h:8, from /<>/scitbx/array_family/tiny.h:5, from /<>/scitbx/array_family/small_plain.h:4, from /<>/scitbx/array_family/small.h:4, from /<>/scitbx/array_family/accessors/flex_grid.h:5: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] In file included from /<>/scitbx/array_family/boost_python/flex_wrapper.h:18: /<>/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = int]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here /<>/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = int]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here /<>/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = long int]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here /<>/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = long int]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here /<>/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = signed char]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here /<>/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = signed char]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here /<>/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = short int]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here /<>/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = short int]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here /<>/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = int]’: /<>/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = int]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here /<>/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; /<>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = long int]’: /<>/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = long int]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here /<>/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] /<>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = signed char]’: /<>/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = signed char]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here /<>/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] /<>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = short int]’: /<>/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = short int]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here /<>/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] g++ -o scitbx/array_family/boost_python/flex_float.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/array_family/boost_python/flex_float.cpp In file included from /<>/scitbx/error.h:16, from /<>/scitbx/array_family/accessors/flex_grid.h:4, from /<>/scitbx/array_family/flex_types.h:6, from /<>/scitbx/array_family/boost_python/flex_wrapper.h:15, from /<>/scitbx/array_family/boost_python/flex_float.cpp:1: /<>/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /<>/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = float]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here /<>/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = float]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_function.h:1438, from /usr/include/c++/13/functional:49, from /usr/include/boost/config/no_tr1/functional.hpp:21, from /usr/include/boost/function/detail/prologue.hpp:15, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /<>/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/13/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /<>/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = float]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here /<>/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = float]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ In file included from /usr/include/c++/13/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /<>/scitbx/array_family/ref_reductions.h:8, from /<>/scitbx/array_family/tiny.h:5, from /<>/scitbx/array_family/small_plain.h:4, from /<>/scitbx/array_family/small.h:4, from /<>/scitbx/array_family/accessors/flex_grid.h:5: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] In file included from /<>/scitbx/array_family/boost_python/flex_wrapper.h:18: /<>/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = float]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here /<>/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = float]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here /<>/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = float]’: /<>/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = float]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here /<>/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; g++ -o scitbx/array_family/boost_python/flex_double.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/array_family/boost_python/flex_double.cpp In file included from /<>/scitbx/error.h:16, from /<>/scitbx/array_family/accessors/flex_grid.h:4, from /<>/scitbx/array_family/flex_types.h:6, from /<>/scitbx/array_family/boost_python/flex_wrapper.h:15, from /<>/scitbx/array_family/boost_python/flex_double.cpp:1: /<>/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /<>/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/flex_double.cpp: In function ‘scitbx::af::flex::type* scitbx::af::{anonymous}::from_list_or_tuple_of_lists_or_tuples(PyObject*)’: /<>/scitbx/array_family/boost_python/flex_double.cpp:138:38: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 138 | if (PyList_GET_SIZE(row) != n_columns) { | ^ /<>/scitbx/array_family/boost_python/flex_double.cpp:154:39: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 154 | if (PyTuple_GET_SIZE(row) != n_columns) { | ^ /<>/scitbx/array_family/boost_python/flex_double.cpp:190:38: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 190 | if (PyList_GET_SIZE(row) != n_columns) { | ^ /<>/scitbx/array_family/boost_python/flex_double.cpp:206:39: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 206 | if (PyTuple_GET_SIZE(row) != n_columns) { | ^ /<>/scitbx/array_family/boost_python/flex_double.cpp: In function ‘std::string scitbx::af::{anonymous}::mathematica_form(const scitbx::af::const_ref >&)’: /<>/scitbx/array_family/boost_python/flex_double.cpp:452:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 452 | for (int i=1; i>/scitbx/array_family/boost_python/flex_double.cpp:454:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 454 | if (i != indices.size() - 1) o << ","; | ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/scitbx/array_family/boost_python/flex_double.cpp:7: /<>/scitbx/matrix/norms.h: In instantiation of ‘FloatType scitbx::matrix::norm_1(const scitbx::af::const_ref&) [with FloatType = double]’: /<>/scitbx/array_family/boost_python/flex_double.cpp:365:26: required from here /<>/scitbx/matrix/norms.h:25:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 25 | for (int i=0; i>/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = double]’: /<>/scitbx/array_family/boost_python/flex_double.cpp:536:8: required from here /<>/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = double]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here /<>/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = double]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_function.h:1438, from /usr/include/c++/13/functional:49, from /usr/include/boost/config/no_tr1/functional.hpp:21, from /usr/include/boost/function/detail/prologue.hpp:15, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /<>/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/13/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /<>/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = double]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here /<>/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = double]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ In file included from /usr/include/c++/13/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /<>/scitbx/array_family/ref_reductions.h:8, from /<>/scitbx/array_family/tiny.h:5, from /<>/scitbx/array_family/small_plain.h:4, from /<>/scitbx/array_family/small.h:4, from /<>/scitbx/array_family/accessors/flex_grid.h:5: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] In file included from /<>/scitbx/array_family/boost_python/flex_wrapper.h:18: /<>/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = double]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here /<>/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = double]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here /<>/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = double]’: /<>/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = double]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here /<>/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; g++ -o scitbx/array_family/boost_python/flex_double_matrix.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/array_family/boost_python/flex_double_matrix.cpp In file included from /<>/scitbx/array_family/boost_python/flex_double_matrix.cpp:4: /<>/scitbx/matrix/norms.h: In instantiation of ‘FloatType scitbx::matrix::norm_1(const scitbx::af::const_ref >&) [with FloatType = double]’: /<>/scitbx/array_family/boost_python/flex_double_matrix.cpp:119:74: required from here /<>/scitbx/matrix/norms.h:16:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 16 | for (int i=0; i>/scitbx/matrix/norms.h:16:51: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 16 | for (int i=0; i>/scitbx/matrix/norms.h: In instantiation of ‘FloatType scitbx::matrix::norm_inf(const scitbx::af::const_ref >&) [with FloatType = double]’: /<>/scitbx/array_family/boost_python/flex_double_matrix.cpp:177:11: required from here /<>/scitbx/matrix/norms.h:32:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 32 | for (int i=0; i>/scitbx/matrix/norms.h:34:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 34 | for (int j=0; j>/scitbx/matrix/norms.h: In instantiation of ‘FloatType scitbx::matrix::norm_frobenius(const scitbx::af::const_ref >&) [with FloatType = double]’: /<>/scitbx/array_family/boost_python/flex_double_matrix.cpp:178:11: required from here /<>/scitbx/matrix/norms.h:46:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 46 | for (int k=0; k < a_ij.size(); ++k) norm_accu(a_ij[k]); | ~~^~~~~~~~~~~~~ g++ -o scitbx/array_family/boost_python/flex_complex_double.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/array_family/boost_python/flex_complex_double.cpp g++ -o scitbx/array_family/boost_python/flex_std_string.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/array_family/boost_python/flex_std_string.cpp In file included from /<>/scitbx/error.h:16, from /<>/scitbx/array_family/accessors/flex_grid.h:4, from /<>/scitbx/array_family/flex_types.h:6, from /<>/scitbx/array_family/boost_python/flex_wrapper.h:15, from /<>/scitbx/array_family/boost_python/flex_complex_double.cpp:1: /<>/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /<>/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ In file included from /usr/include/c++/13/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /<>/scitbx/array_family/ref_reductions.h:8, from /<>/scitbx/array_family/tiny.h:5, from /<>/scitbx/array_family/small_plain.h:4, from /<>/scitbx/array_family/small.h:4, from /<>/scitbx/array_family/accessors/flex_grid.h:5: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] In file included from /<>/scitbx/array_family/boost_python/flex_wrapper.h:18: /<>/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = std::complex]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24: required from here /<>/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = std::complex]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24: required from here /<>/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = std::complex]’: /<>/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = std::complex]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24: required from here /<>/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /<>/scitbx/array_family/boost_python/flex_std_string.cpp:3: /<>/scitbx/misc/split_lines.h: In function ‘scitbx::af::shared > scitbx::misc::split_lines(const char*, std::size_t, bool, bool)’: /<>/scitbx/misc/split_lines.h:24:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 24 | while (i < size) { | ~~^~~~~~ /<>/scitbx/misc/split_lines.h:25:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 25 | while (i < size && data[i] != '\n' && data[i] != '\r') i++; | ~~^~~~~~ /<>/scitbx/misc/split_lines.h:27:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 27 | if (i < size) { | ~~^~~~~~ /<>/scitbx/misc/split_lines.h:28:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 28 | if (data[i] == '\r' && i+1 < size && data[i+1] == '\n') { | ~~~~^~~~~~ /<>/scitbx/misc/split_lines.h:46:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 46 | if (j < size) { | ~~^~~~~~ In file included from /<>/scitbx/array_family/boost_python/flex_std_string.cpp:1: /<>/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >; e_t = std::__cxx11::basic_string]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:885:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here /<>/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<__cxx11::basic_string >; _Tp = __cxx11::basic_string]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_function.h:1438, from /usr/include/c++/13/functional:49, from /usr/include/boost/config/no_tr1/functional.hpp:21, from /usr/include/boost/function/detail/prologue.hpp:15, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /<>/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/13/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /<>/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >; e_t = std::__cxx11::basic_string]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:886:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here /<>/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<__cxx11::basic_string >; _Tp = __cxx11::basic_string]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ In file included from /usr/include/c++/13/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /<>/scitbx/array_family/ref_reductions.h:8, from /<>/scitbx/array_family/tiny.h:5, from /<>/scitbx/array_family/small_plain.h:4, from /<>/scitbx/array_family/small.h:4, from /<>/scitbx/array_family/accessors/flex_grid.h:5, from /<>/scitbx/array_family/flex_types.h:6, from /<>/scitbx/array_family/boost_python/flex_wrapper.h:15: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:888:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:888:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] In file included from /<>/scitbx/array_family/boost_python/flex_wrapper.h:18: /<>/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = std::__cxx11::basic_string]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:888:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here /<>/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = std::__cxx11::basic_string]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:888:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here /<>/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = std::__cxx11::basic_string]’: /<>/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:888:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here /<>/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; g++ -o scitbx/array_family/boost_python/flex_random.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/array_family/boost_python/flex_random.cpp g++ -o scitbx/array_family/boost_python/flex_sort.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/array_family/boost_python/flex_sort.cpp g++ -o scitbx/array_family/boost_python/flex_histogram.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/array_family/boost_python/flex_histogram.cpp g++ -o scitbx/array_family/boost_python/flex_weighted_histogram.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/array_family/boost_python/flex_weighted_histogram.cpp g++ -o scitbx/array_family/boost_python/flex_mean_and_variance.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/array_family/boost_python/flex_mean_and_variance.cpp g++ -o scitbx/array_family/boost_python/flex_median.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/array_family/boost_python/flex_median.cpp g++ -o scitbx/array_family/boost_python/flex_linear_interpolation.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/array_family/boost_python/flex_linear_interpolation.cpp g++ -o scitbx/array_family/boost_python/flex_vec3_double.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/array_family/boost_python/flex_vec3_double.cpp g++ -o scitbx/array_family/boost_python/flex_vec2_double.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/array_family/boost_python/flex_vec2_double.cpp In file included from /<>/scitbx/array_family/boost_python/flex_median.cpp:2: /<>/scitbx/math/basic_statistics.h: In instantiation of ‘scitbx::math::median_statistics scitbx::math::median_functor::dispersion(const scitbx::af::ref&) [with FloatType = double]’: /<>/scitbx/array_family/boost_python/flex_median.cpp:31:26: required from ‘static scitbx::math::median_statistics scitbx::af::boost_python::median_functor_wrapper::dispersion(wt&, const scitbx::af::const_ref&) [with FloatType = double; wt = scitbx::math::median_functor]’ /<>/scitbx/array_family/boost_python/flex_median.cpp:40:13: required from ‘static void scitbx::af::boost_python::median_functor_wrapper::wrap(const char*) [with FloatType = double]’ /<>/scitbx/array_family/boost_python/flex_median.cpp:63:41: required from here /<>/scitbx/math/basic_statistics.h:210:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 210 | for (int i=0; i < data.size(); ++i) { | ~~^~~~~~~~~~~~~ g++ -o scitbx/array_family/boost_python/flex_vec3_int.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/array_family/boost_python/flex_vec3_int.cpp In file included from /<>/scitbx/error.h:16, from /<>/scitbx/array_family/accessors/flex_grid.h:4, from /<>/scitbx/array_family/flex_types.h:6, from /<>/scitbx/array_family/boost_python/flex_wrapper.h:15, from /<>/scitbx/array_family/boost_python/flex_vec3_double.cpp:3: /<>/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /<>/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ g++ -o scitbx/array_family/boost_python/flex_sym_mat3_double.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp In file included from /usr/include/c++/13/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /<>/scitbx/array_family/ref_reductions.h:8, from /<>/scitbx/array_family/tiny.h:5, from /<>/scitbx/array_family/small_plain.h:4, from /<>/scitbx/array_family/small.h:4, from /<>/scitbx/array_family/accessors/flex_grid.h:5: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_vec3_double.cpp:567:15: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_vec3_double.cpp:567:15: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] In file included from /<>/scitbx/array_family/boost_python/flex_wrapper.h:18: /<>/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = scitbx::vec3]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_vec3_double.cpp:567:15: required from here /<>/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = scitbx::vec3]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_vec3_double.cpp:567:15: required from here /<>/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = scitbx::vec3]’: /<>/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = scitbx::vec3]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_vec3_double.cpp:567:15: required from here /<>/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /<>/scitbx/error.h:16, from /<>/scitbx/array_family/accessors/flex_grid.h:4, from /<>/scitbx/array_family/flex_types.h:6, from /<>/scitbx/array_family/boost_python/flex_wrapper.h:15, from /<>/scitbx/array_family/boost_python/flex_vec2_double.cpp:3: /<>/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /<>/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/flex_vec2_double.cpp: In function ‘scitbx::af::flex >::type* scitbx::af::{anonymous}::array_indices_as_double_from_array_focus_dimensions(const scitbx::vec2&)’: /<>/scitbx/array_family/boost_python/flex_vec2_double.cpp:128:26: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 128 | for(std::size_t i=0;i>/scitbx/array_family/boost_python/flex_vec2_double.cpp:129:28: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 129 | for(std::size_t j=0;j>/scitbx/array_family/ref_reductions.h:8, from /<>/scitbx/array_family/tiny.h:5, from /<>/scitbx/array_family/small_plain.h:4, from /<>/scitbx/array_family/small.h:4, from /<>/scitbx/array_family/accessors/flex_grid.h:5: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_vec2_double.cpp:440:15: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_vec2_double.cpp:440:15: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] In file included from /<>/scitbx/array_family/boost_python/flex_wrapper.h:18: /<>/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = scitbx::vec2]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_vec2_double.cpp:440:15: required from here /<>/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = scitbx::vec2]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_vec2_double.cpp:440:15: required from here /<>/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = scitbx::vec2]’: /<>/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = scitbx::vec2]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_vec2_double.cpp:440:15: required from here /<>/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /<>/scitbx/error.h:16, from /<>/scitbx/array_family/accessors/flex_grid.h:4, from /<>/scitbx/array_family/flex_types.h:6, from /<>/scitbx/array_family/boost_python/flex_wrapper.h:15, from /<>/scitbx/array_family/boost_python/flex_vec3_int.cpp:3: /<>/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /<>/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ In file included from /usr/include/c++/13/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /<>/scitbx/array_family/ref_reductions.h:8, from /<>/scitbx/array_family/tiny.h:5, from /<>/scitbx/array_family/small_plain.h:4, from /<>/scitbx/array_family/small.h:4, from /<>/scitbx/array_family/accessors/flex_grid.h:5: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] In file included from /<>/scitbx/array_family/boost_python/flex_wrapper.h:18: /<>/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = scitbx::vec3]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15: required from here /<>/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = scitbx::vec3]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15: required from here /<>/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = scitbx::vec3]’: /<>/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = scitbx::vec3]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15: required from here /<>/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /<>/scitbx/error.h:16, from /<>/scitbx/array_family/accessors/flex_grid.h:4, from /<>/scitbx/array_family/flex_types.h:6, from /<>/scitbx/array_family/boost_python/flex_wrapper.h:15, from /<>/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:3: /<>/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /<>/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ In file included from /usr/include/c++/13/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /<>/scitbx/array_family/ref_reductions.h:8, from /<>/scitbx/array_family/tiny.h:5, from /<>/scitbx/array_family/small_plain.h:4, from /<>/scitbx/array_family/small.h:4, from /<>/scitbx/array_family/accessors/flex_grid.h:5: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] In file included from /<>/scitbx/array_family/boost_python/flex_wrapper.h:18: /<>/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = scitbx::sym_mat3]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15: required from here /<>/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = scitbx::sym_mat3]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15: required from here /<>/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = scitbx::sym_mat3]’: /<>/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = scitbx::sym_mat3]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15: required from here /<>/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /<>/scitbx/array_family/versa_plain.h:5, from /<>/scitbx/array_family/versa.h:4, from /<>/scitbx/array_family/flex_types.h:7: /<>/scitbx/array_family/shared_plain.h: In member function ‘scitbx::af::shared_plain >::shared_plain(unsigned long const&)’: /<>/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/memory:69, from /usr/include/boost/function/function_base.hpp:33, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /<>/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/13/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const struct vec3 &’ to ‘std::uninitialized_fill_n*, unsigned long, scitbx::vec3 >(scitbx::vec3*, unsigned long, scitbx::vec3 const&)scitbx::vec3* [clone .isra.0]’ declared here 312 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ In file included from /<>/scitbx/array_family/versa_plain.h:5, from /<>/scitbx/array_family/versa.h:4, from /<>/scitbx/array_family/flex_types.h:7: /<>/scitbx/array_family/shared_plain.h: In member function ‘scitbx::af::shared_plain >::shared_plain(unsigned long const&)’: /<>/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/memory:69, from /usr/include/boost/function/function_base.hpp:33, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /<>/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/13/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const struct vec3 &’ to ‘std::uninitialized_fill_n*, unsigned long, scitbx::vec3 >(scitbx::vec3*, unsigned long, scitbx::vec3 const&)scitbx::vec3* [clone .isra.0]’ declared here 312 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ In file included from /<>/scitbx/array_family/versa_plain.h:5, from /<>/scitbx/array_family/versa.h:4, from /<>/scitbx/array_family/flex_types.h:7: /<>/scitbx/array_family/shared_plain.h: In member function ‘scitbx::af::shared_plain >::shared_plain(unsigned long const&)’: /<>/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/memory:69, from /usr/include/boost/function/function_base.hpp:33, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /<>/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/13/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const struct vec2 &’ to ‘std::uninitialized_fill_n*, unsigned long, scitbx::vec2 >(scitbx::vec2*, unsigned long, scitbx::vec2 const&)scitbx::vec2* [clone .isra.0]’ declared here 312 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/versa_plain.h: In member function ‘scitbx::af::versa_plain, scitbx::af::flex_grid > >::resize(scitbx::af::flex_grid > const&)’: /<>/scitbx/array_family/versa_plain.h:168:27: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/scitbx/array_family/shared_plain.h:307: /<>/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const struct vec3 &’ to ‘scitbx::af::shared_plain >::resize(unsigned long const&, scitbx::vec3 const&) [clone .isra.0]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /<>/scitbx/array_family/versa_plain.h:168:50: note: ‘’ declared here 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ^~~~~~~~~~~~~ In file included from /<>/scitbx/array_family/versa_plain.h:5, from /<>/scitbx/array_family/versa.h:4, from /<>/scitbx/array_family/flex_types.h:7: /<>/scitbx/array_family/shared_plain.h: In member function ‘scitbx::af::shared_plain >::shared_plain(unsigned long const&)’: /<>/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/memory:69, from /usr/include/boost/function/function_base.hpp:33, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /<>/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/13/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const struct sym_mat3 &’ to ‘std::uninitialized_fill_n*, unsigned long, scitbx::sym_mat3 >(scitbx::sym_mat3*, unsigned long, scitbx::sym_mat3 const&)scitbx::sym_mat3* [clone .isra.0]’ declared here 312 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/versa_plain.h: In member function ‘scitbx::af::versa_plain, scitbx::af::flex_grid > >::resize(scitbx::af::flex_grid > const&)’: /<>/scitbx/array_family/versa_plain.h:168:27: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/scitbx/array_family/shared_plain.h:307: /<>/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const struct vec2 &’ to ‘scitbx::af::shared_plain >::resize(unsigned long const&, scitbx::vec2 const&) [clone .isra.0]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /<>/scitbx/array_family/versa_plain.h:168:50: note: ‘’ declared here 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/versa_plain.h: In member function ‘scitbx::af::versa_plain, scitbx::af::flex_grid > >::resize(scitbx::af::flex_grid > const&)’: /<>/scitbx/array_family/versa_plain.h:168:27: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/scitbx/array_family/shared_plain.h:307: /<>/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const struct sym_mat3 &’ to ‘scitbx::af::shared_plain >::resize(unsigned long const&, scitbx::sym_mat3 const&) [clone .isra.0]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /<>/scitbx/array_family/versa_plain.h:168:50: note: ‘’ declared here 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/versa_plain.h: In member function ‘scitbx::af::versa_plain, scitbx::af::flex_grid > >::resize(scitbx::af::flex_grid > const&)’: /<>/scitbx/array_family/versa_plain.h:168:27: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/scitbx/array_family/shared_plain.h:307: /<>/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const struct vec3 &’ to ‘scitbx::af::shared_plain >::resize(unsigned long const&, scitbx::vec3 const&) [clone .isra.0]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /<>/scitbx/array_family/versa_plain.h:168:50: note: ‘’ declared here 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ^~~~~~~~~~~~~ g++ -o scitbx/array_family/boost_python/flex_mat3_double.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/array_family/boost_python/flex_mat3_double.cpp g++ -o scitbx/array_family/boost_python/flex_tiny_size_t_2.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp In file included from /<>/scitbx/error.h:16, from /<>/scitbx/array_family/accessors/flex_grid.h:4, from /<>/scitbx/array_family/flex_types.h:6, from /<>/scitbx/array_family/boost_python/flex_wrapper.h:15, from /<>/scitbx/array_family/boost_python/flex_mat3_double.cpp:3: /<>/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /<>/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ In file included from /usr/include/c++/13/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /<>/scitbx/array_family/ref_reductions.h:8, from /<>/scitbx/array_family/tiny.h:5, from /<>/scitbx/array_family/small_plain.h:4, from /<>/scitbx/array_family/small.h:4, from /<>/scitbx/array_family/accessors/flex_grid.h:5: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] In file included from /<>/scitbx/array_family/boost_python/flex_wrapper.h:18: /<>/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = scitbx::mat3]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15: required from here /<>/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = scitbx::mat3]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15: required from here /<>/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = scitbx::mat3]’: /<>/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = scitbx::mat3]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15: required from here /<>/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; g++ -o scitbx/array_family/boost_python/loops.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/array_family/boost_python/loops.cpp g++ -o scitbx/array_family/boost_python/show_sizes.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/array_family/boost_python/show_sizes.cpp In file included from /usr/include/c++/13/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /<>/scitbx/array_family/ref_reductions.h:8, from /<>/scitbx/array_family/tiny.h:5, from /<>/scitbx/array_family/small_plain.h:4, from /<>/scitbx/array_family/small.h:4, from /<>/scitbx/array_family/accessors/flex_grid.h:5, from /<>/scitbx/array_family/flex_types.h:6, from /<>/scitbx/array_family/boost_python/flex_wrapper.h:15, from /<>/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:3: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] In file included from /<>/scitbx/array_family/boost_python/flex_wrapper.h:18: /<>/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = tiny]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47: required from here /<>/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = tiny]’: /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47: required from here /<>/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i>/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = scitbx::af::tiny]’: /<>/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = tiny]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy]’ /<>/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47: required from here /<>/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /<>/scitbx/array_family/versa_plain.h:5, from /<>/scitbx/array_family/versa.h:4, from /<>/scitbx/array_family/flex_types.h:7: /<>/scitbx/array_family/shared_plain.h: In member function ‘scitbx::af::shared_plain >::shared_plain(unsigned long const&)’: /<>/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/memory:69, from /usr/include/boost/function/function_base.hpp:33, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /<>/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/13/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const struct mat3 &’ to ‘std::uninitialized_fill_n*, unsigned long, scitbx::mat3 >(scitbx::mat3*, unsigned long, scitbx::mat3 const&)scitbx::mat3* [clone .isra.0]’ declared here 312 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ In file included from /<>/scitbx/array_family/versa_plain.h:5, from /<>/scitbx/array_family/versa.h:4, from /<>/scitbx/array_family/flex_types.h:7: /<>/scitbx/array_family/shared_plain.h: In member function ‘scitbx::af::shared_plain >::shared_plain(unsigned long const&)’: /<>/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/memory:69, from /usr/include/boost/function/function_base.hpp:33, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /<>/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/13/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const struct tiny &’ to ‘std::uninitialized_fill_n*, unsigned long, scitbx::af::tiny >(scitbx::af::tiny*, unsigned long, scitbx::af::tiny const&)scitbx::af::tiny* [clone .isra.0]’ declared here 312 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ g++ -o scitbx/array_family/boost_python/numpy_bridge.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DSCITBX_HAVE_NUMPY_INCLUDE -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/usr/lib/python3/dist-packages/numpy/core/include /<>/scitbx/array_family/boost_python/numpy_bridge.cpp /<>/scitbx/array_family/versa_plain.h: In member function ‘scitbx::af::versa_plain, scitbx::af::flex_grid > >::resize(scitbx::af::flex_grid > const&)’: /<>/scitbx/array_family/versa_plain.h:168:27: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/scitbx/array_family/shared_plain.h:307: /<>/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const struct mat3 &’ to ‘scitbx::af::shared_plain >::resize(unsigned long const&, scitbx::mat3 const&) [clone .isra.0]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /<>/scitbx/array_family/versa_plain.h:168:50: note: ‘’ declared here 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ^~~~~~~~~~~~~ g++ -o scitbx/array_family/boost_python/shared_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/array_family/boost_python/shared_ext.cpp /<>/scitbx/array_family/versa_plain.h: In member function ‘scitbx::af::versa_plain, scitbx::af::flex_grid > >::resize(scitbx::af::flex_grid > const&)’: /<>/scitbx/array_family/versa_plain.h:168:27: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/scitbx/array_family/shared_plain.h:307: /<>/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const struct tiny &’ to ‘scitbx::af::shared_plain >::resize(unsigned long const&, scitbx::af::tiny const&) [clone .isra.0]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /<>/scitbx/array_family/versa_plain.h:168:50: note: ‘’ declared here 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ^~~~~~~~~~~~~ In file included from /usr/include/c++/13/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /<>/scitbx/array_family/ref_reductions.h:8, from /<>/scitbx/array_family/tiny.h:5, from /<>/scitbx/array_family/shared_plain.h:31, from /<>/scitbx/array_family/shared.h:4, from /<>/scitbx/array_family/boost_python/shared_wrapper.h:12, from /<>/scitbx/array_family/boost_python/shared_ext.cpp:3: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = std::vector; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/shared_ext.cpp:40:53: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = std::vector; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/shared_ext.cpp:41:51: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = std::set; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/shared_ext.cpp:42:50: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/shared_ext.cpp:48:37: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/shared_ext.cpp:49:40: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/shared_ext.cpp:50:40: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ /<>/scitbx/array_family/boost_python/shared_ext.cpp:51:40: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = bool]’: /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:202:3: required from here /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i>/scitbx/error.h:16, from /<>/scitbx/array_family/versa_plain.h:4, from /<>/scitbx/array_family/versa.h:4, from /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:4: /<>/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘scitbx::af::versa > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = bool]’: /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:202:3: required from here /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = int]’: /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:203:3: required from here /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i>/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘scitbx::af::versa > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = int]’: /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:203:3: required from here /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = long int]’: /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:204:3: required from here /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i>/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘scitbx::af::versa > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = long int]’: /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:204:3: required from here /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = float]’: /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:205:3: required from here /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i>/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘scitbx::af::versa > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = float]’: /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:205:3: required from here /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = double]’: /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:206:3: required from here /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i>/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘scitbx::af::versa > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = double]’: /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:206:3: required from here /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = std::complex]’: /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:207:3: required from here /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i>/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘scitbx::af::versa > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = std::complex]’: /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:207:3: required from here /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = signed char]’: /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:208:3: required from here /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i>/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘scitbx::af::versa > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = signed char]’: /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:208:3: required from here /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = short int]’: /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:209:3: required from here /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i>/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘scitbx::af::versa > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = short int]’: /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:209:3: required from here /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = unsigned char]’: /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:214:3: required from here /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i>/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘scitbx::af::versa > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = unsigned char]’: /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:214:3: required from here /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = short unsigned int]’: /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:215:3: required from here /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i>/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘scitbx::af::versa > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = short unsigned int]’: /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:215:3: required from here /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = unsigned int]’: /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:216:3: required from here /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i>/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘scitbx::af::versa > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = unsigned int]’: /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:216:3: required from here /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = long unsigned int]’: /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:224:3: required from here /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i>/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘scitbx::af::versa > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = long unsigned int]’: /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:224:3: required from here /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ g++ -o scitbx/cubicle_neighbors_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/cubicle_neighbors_ext.cpp g++ -o scitbx/fftpack/boost_python/fftpack_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/fftpack/boost_python/fftpack_ext.cpp g++ -o lib/scitbx_array_family_flex_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_array_family_flex_ext.so.0 scitbx/array_family/boost_python/flex_ext.o scitbx/array_family/boost_python/flex_grid.o scitbx/array_family/boost_python/flex_bool.o scitbx/array_family/boost_python/flex_size_t.o scitbx/array_family/boost_python/flex_int.o scitbx/array_family/boost_python/flex_float.o scitbx/array_family/boost_python/flex_double.o scitbx/array_family/boost_python/flex_double_matrix.o scitbx/array_family/boost_python/flex_complex_double.o scitbx/array_family/boost_python/flex_std_string.o scitbx/array_family/boost_python/flex_random.o scitbx/array_family/boost_python/flex_sort.o scitbx/array_family/boost_python/flex_histogram.o scitbx/array_family/boost_python/flex_weighted_histogram.o scitbx/array_family/boost_python/flex_mean_and_variance.o scitbx/array_family/boost_python/flex_median.o scitbx/array_family/boost_python/flex_linear_interpolation.o scitbx/array_family/boost_python/flex_vec3_double.o scitbx/array_family/boost_python/flex_vec2_double.o scitbx/array_family/boost_python/flex_vec3_int.o scitbx/array_family/boost_python/flex_sym_mat3_double.o scitbx/array_family/boost_python/flex_mat3_double.o scitbx/array_family/boost_python/flex_tiny_size_t_2.o scitbx/array_family/boost_python/loops.o scitbx/array_family/boost_python/show_sizes.o scitbx/array_family/boost_python/numpy_bridge.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm -lboost_numpy312 In file included from /<>/scitbx/fftpack/gridding.h:5, from /<>/scitbx/fftpack/boost_python/fftpack_ext.cpp:4: /<>/scitbx/fftpack/factorization.h: In constructor ‘scitbx::fftpack::factorization::factorization(std::size_t, bool)’: /<>/scitbx/fftpack/factorization.h:64:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (i = 0; red_n > 1 && i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ /<>/scitbx/fftpack/factorization.h:67:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 67 | for (i = 0; i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ In file included from /<>/scitbx/cubicle_neighbors_ext.cpp:3: /<>/scitbx/cubicle_neighbors.hpp: In instantiation of ‘std::map > scitbx::cubicle_neighbors::neighbors_of(const scitbx::af::const_ref >&, const FloatType&) [with FloatType = double]’: /<>/scitbx/cubicle_neighbors_ext.cpp:23:36: required from here /<>/scitbx/cubicle_neighbors.hpp:61:40: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 61 | if (i_cub[0] < 0 || i_cub[0] >= n_cubicles[0]) continue; /<>/scitbx/cubicle_neighbors.hpp:63:40: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 63 | if (i_cub[1] < 0 || i_cub[1] >= n_cubicles[1]) continue; /<>/scitbx/cubicle_neighbors.hpp:65:40: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 65 | if (i_cub[2] < 0 || i_cub[2] >= n_cubicles[2]) continue; In file included from /<>/scitbx/cubicle_neighbors.hpp:4: /<>/scitbx/cubicles.h: In instantiation of ‘scitbx::vec3 scitbx::cubicles::i_cubicle(const SiteType&) const [with SiteType = scitbx::vec3; CubicleContentType = std::vector::cubicle_site, std::allocator::cubicle_site> >; FloatType = double]’: /<>/scitbx/cubicle_neighbors.hpp:43:30: required from ‘scitbx::cubicle_neighbors::cubicle_neighbors(const scitbx::af::const_ref >&, const FloatType&, const FloatType&) [with FloatType = double]’ /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2) [with A0 = boost::python::objects::reference_to_value >&>; A1 = boost::python::objects::reference_to_value; A2 = boost::python::objects::reference_to_value; Value = scitbx::cubicle_neighbors<>; PyObject = _object]’ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<3>::apply::execute(PyObject*, t0, t1, t2) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::vector3 >&, const double&, const double&>; PyObject = _object; t0 = const scitbx::af::const_ref >&; t1 = const double&; t2 = const double&]’ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::vector3 >&, const double&, const double&>; Arity = boost::mpl::size >&, const double&, const double&> >; Holder = boost::python::objects::value_holder >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ /usr/include/boost/python/init.hpp:310:66: required from ‘void boost::python::detail::def_init_aux(ClassT&, const Signature&, NArgs, const CallPoliciesT&, const char*, const keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector3 >&, const double&, const double&>; NArgs = boost::mpl::size >&, const double&, const double&> >; keyword_range = std::pair]’ /usr/include/boost/python/init.hpp:377:31: required from ‘static void boost::python::detail::define_class_init_helper<0>::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, const boost::python::detail::keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector3 >&, const double&, const double&>; NArgs = boost::mpl::size >&, const double&, const double&> >; boost::python::detail::keyword_range = std::pair]’ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_ >; DerivedT = boost::python::init >&, const double&, const double&>]’ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor >&, const double&, const double&> >; classT = boost::python::class_ >]’ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_ >; DerivedVisitor = boost::python::init >&, const double&, const double&>]’ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init >&, const double&, const double&>; W = scitbx::cubicle_neighbors<>; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_ >]’ /<>/scitbx/cubicle_neighbors_ext.cpp:16:13: required from here /<>/scitbx/cubicles.h:176:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 176 | else if (j >= ref.accessor()[i]) j = ref.accessor()[i]-1; | ~~^~~~~~~~~~~~~~~~~~ g++ -o lib/scitbx_cubicle_neighbors_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_cubicle_neighbors_ext.so.0 scitbx/cubicle_neighbors_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/scitbx_cubicle_neighbors_ext.so.0.0.1' 'lib/scitbx_cubicle_neighbors_ext.so.0'->'lib/scitbx_cubicle_neighbors_ext.so.0.0.1' 'lib/scitbx_cubicle_neighbors_ext.so'->'lib/scitbx_cubicle_neighbors_ext.so.0.0.1' g++ -o scitbx/glmtbx/boost_python/ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/glmtbx/boost_python/ext.cc g++ -o lib/scitbx_fftpack_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_fftpack_ext.so.0 scitbx/fftpack/boost_python/fftpack_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/scitbx_array_family_shared_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_array_family_shared_ext.so.0 scitbx/array_family/boost_python/shared_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm -lboost_numpy312 Create symlinks for: 'lib/scitbx_fftpack_ext.so.0.0.1' 'lib/scitbx_fftpack_ext.so.0'->'lib/scitbx_fftpack_ext.so.0.0.1' 'lib/scitbx_fftpack_ext.so'->'lib/scitbx_fftpack_ext.so.0.0.1' g++ -o scitbx/graphics_utils/ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/graphics_utils/ext.cpp g++ -o lib/scitbx_glmtbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_glmtbx_ext.so.0 scitbx/glmtbx/boost_python/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/scitbx_glmtbx_ext.so.0.0.1' 'lib/scitbx_glmtbx_ext.so.0'->'lib/scitbx_glmtbx_ext.so.0.0.1' 'lib/scitbx_glmtbx_ext.so'->'lib/scitbx_glmtbx_ext.so.0.0.1' g++ -o scitbx/iso_surface/iso_surface_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/iso_surface/iso_surface_ext.cpp Create symlinks for: 'lib/scitbx_array_family_shared_ext.so.0.0.1' 'lib/scitbx_array_family_shared_ext.so.0'->'lib/scitbx_array_family_shared_ext.so.0.0.1' 'lib/scitbx_array_family_shared_ext.so'->'lib/scitbx_array_family_shared_ext.so.0.0.1' g++ -o scitbx/lbfgs/ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -DSCITBX_LBFGS_HAVE_LBFGS_FEM -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 -I/<>/fable /<>/scitbx/lbfgs/ext.cpp g++ -o lib/scitbx_graphics_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_graphics_utils_ext.so.0 scitbx/graphics_utils/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/scitbx_iso_surface_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_iso_surface_ext.so.0 scitbx/iso_surface/iso_surface_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/scitbx_graphics_utils_ext.so.0.0.1' 'lib/scitbx_graphics_utils_ext.so.0'->'lib/scitbx_graphics_utils_ext.so.0.0.1' 'lib/scitbx_graphics_utils_ext.so'->'lib/scitbx_graphics_utils_ext.so.0.0.1' g++ -o scitbx/lbfgs/lbfgs_fem.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/<>/fable scitbx/lbfgs/lbfgs_fem.cpp Create symlinks for: 'lib/scitbx_iso_surface_ext.so.0.0.1' 'lib/scitbx_iso_surface_ext.so.0'->'lib/scitbx_iso_surface_ext.so.0.0.1' 'lib/scitbx_iso_surface_ext.so'->'lib/scitbx_iso_surface_ext.so.0.0.1' g++ -o scitbx/lbfgsb/boost_python/lbfgsb_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp In file included from /<>/fable/fem/io.hpp:8, from /<>/fable/fem/close_chain.hpp:4, from /<>/fable/fem/common.hpp:4, from /<>/fable/fem/read.hpp:4, from /<>/fable/fem/major_types.hpp:6, from /<>/fable/fem.hpp:10, from /<>/.pybuild/cpython3_3.12/build_/include/scitbx/lbfgs_fem.hpp:1, from scitbx/lbfgs/lbfgs_fem.cpp:1: /<>/fable/fem/utils/simple_streams.hpp: In member function ‘virtual void fem::utils::simple_ostream_to_char_ptr_and_size::put(char)’: /<>/fable/fem/utils/simple_streams.hpp:63:13: warning: comparison of integer expressions of different signedness: ‘fem::ssize_t’ {aka ‘long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 63 | if (i < sz) s[i++] = c; | ~~^~~~ /<>/fable/fem/common.hpp: In member function ‘void fem::common::getarg(int, fem::str_ref) const’: /<>/fable/fem/common.hpp:40:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 40 | if (pos < 0 || pos >= command_line_args.buffer.size()) { | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/fable/fem/utils/string_to_double_fmt.hpp:4, from /<>/fable/fem/read.hpp:9: /<>/fable/fem/utils/string_to_double.hpp: In member function ‘void fem::utils::string_to_double::convert(fem::utils::simple_istream&, unsigned int, int)’: /<>/fable/fem/utils/string_to_double.hpp:115:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 115 | if (dexp <= ad_hoc_limits::max_digit_count) { | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/fable/fem/read.hpp: In member function ‘double fem::read_loop::read_fmt_double()’: /<>/fable/fem/read.hpp:653:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 653 | if (iw+1 != ed.size()) { | ~~~~~^~~~~~~~~~~~ In file included from /<>/fable/fem/variant.hpp:5, from /<>/fable/fem/major_types.hpp:7: /<>/fable/fem/utils/equivalence.hpp: In member function ‘void fem::utils::equivalence::array_alignment::infer_diffs0_from_diff_matrix()’: /<>/fable/fem/utils/equivalence.hpp:93:28: warning: comparison of integer expressions of different signedness: ‘const fem::ssize_t’ {aka ‘const long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 93 | if (c0e[0] == i0) { | ~~~~~~~^~~~~ In file included from /<>/fable/fem/major_types.hpp:8: /<>/fable/fem/write.hpp: In destructor ‘fem::write_loop::~write_loop()’: /<>/fable/fem/write.hpp:704:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 704 | while (pos < internal_file_len) { | ~~~~^~~~~~~~~~~~~~~~~~~ g++ -o scitbx/linalg/boost_python/linalg_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/linalg/boost_python/linalg_ext.cpp In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9, from /usr/include/boost/smart_ptr/scoped_array.hpp:13, from /usr/include/boost/scoped_array.hpp:13, from /<>/scitbx/array_family/ref.h:10, from /<>/scitbx/lbfgsb/raw.h:6, from /<>/scitbx/lbfgsb.h:8, from /<>/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:3: /usr/include/boost/timer.hpp:25:1: note: ‘#pragma message: This header is deprecated. Use the facilities in instead.’ 25 | BOOST_HEADER_DEPRECATED( "the facilities in " ) | ^~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/linalg/boost_python/matrix.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/linalg/boost_python/matrix.cpp In file included from /<>/scitbx/error.h:16, from /<>/scitbx/serialization/base_256.h:2, from /<>/scitbx/math/floating_point_epsilon.h:4, from /<>/scitbx/lbfgsb/raw.h:5: /<>/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::mainlb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’: /<>/scitbx/lbfgsb/raw.h:4433:11: required from ‘void scitbx::lbfgsb::raw::setulb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ /<>/scitbx/lbfgsb.h:142:22: required from ‘bool scitbx::lbfgsb::minimizer::process(const scitbx::af::ref&, const FloatType&, const scitbx::af::ref&, bool) [with FloatType = double]’ /<>/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:29:25: required from ‘static void scitbx::lbfgsb::{anonymous}::minimizer_wrappers::wrap() [with FloatType = double]’ /<>/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:112:37: required from here /<>/scitbx/lbfgsb/raw.h:3671:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3671 | SCITBX_ASSERT(x.size() == n); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3671:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3671 | SCITBX_ASSERT(x.size() == n); | ^~~~~~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3672:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3672 | SCITBX_ASSERT(l.size() == n); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3672:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3672 | SCITBX_ASSERT(l.size() == n); | ^~~~~~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3673:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3673 | SCITBX_ASSERT(u.size() == n); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3673:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3673 | SCITBX_ASSERT(u.size() == n); | ^~~~~~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3674:30: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3674 | SCITBX_ASSERT(nbd.size() == n); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3674:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3674 | SCITBX_ASSERT(nbd.size() == n); | ^~~~~~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3675:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3675 | SCITBX_ASSERT(g.size() == n); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3675:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3675 | SCITBX_ASSERT(g.size() == n); | ^~~~~~~~~~~~~ /<>/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::write_ref1(const std::string&, const ref1&, const char*) [with ElementType = double; std::string = std::__cxx11::basic_string]’: /<>/scitbx/lbfgsb/raw.h:974:19: required from ‘void scitbx::lbfgsb::raw::prn3lb(const int&, const ref1&, const FloatType&, const std::string&, const int&, const int&, const int&, const int&, const int&, const int&, const int&, const int&, const FloatType&, const FloatType&, const int&, const std::string&, const int&, const FloatType&, const FloatType&, const int&, const FloatType&, const FloatType&, const FloatType&) [with FloatType = double; std::string = std::__cxx11::basic_string]’ /<>/scitbx/lbfgsb/raw.h:3786:15: required from ‘void scitbx::lbfgsb::raw::mainlb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ /<>/scitbx/lbfgsb/raw.h:4433:11: required from ‘void scitbx::lbfgsb::raw::setulb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ /<>/scitbx/lbfgsb.h:142:22: required from ‘bool scitbx::lbfgsb::minimizer::process(const scitbx::af::ref&, const FloatType&, const scitbx::af::ref&, bool) [with FloatType = double]’ /<>/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:29:25: required from ‘static void scitbx::lbfgsb::{anonymous}::minimizer_wrappers::wrap() [with FloatType = double]’ /<>/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:112:37: required from here /<>/scitbx/lbfgsb/raw.h:184:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 184 | for(int i=1;i<=a.size();i++) { | ~^~~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:188:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 188 | for(int j=0;j>/scitbx/lbfgsb.h: In instantiation of ‘scitbx::lbfgsb::minimizer::minimizer(const int&, const int&, scitbx::af::shared, scitbx::af::shared, scitbx::af::shared, bool, const FloatType&, const FloatType&, const int&) [with FloatType = double]’: /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2, A3, A4, A5, A6, A7, A8) [with A0 = boost::python::objects::reference_to_value; A1 = boost::python::objects::reference_to_value; A2 = boost::python::objects::reference_to_value >; A3 = boost::python::objects::reference_to_value >; A4 = boost::python::objects::reference_to_value >; A5 = bool; A6 = boost::python::objects::reference_to_value; A7 = boost::python::objects::reference_to_value; A8 = boost::python::objects::reference_to_value; Value = scitbx::lbfgsb::minimizer; PyObject = _object]’ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<9>::apply::execute(PyObject*, t0, t1, t2, t3, t4, t5, t6, t7, t8) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::vector9, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&>; PyObject = _object; t0 = const int&; t1 = const int&; t2 = scitbx::af::shared; t3 = scitbx::af::shared; t4 = scitbx::af::shared; t5 = bool; t6 = const double&; t7 = const double&; t8 = const int&]’ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::vector9, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&>; Arity = boost::mpl::size, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&> >; Holder = boost::python::objects::value_holder >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ /usr/include/boost/python/init.hpp:310:66: required from ‘void boost::python::detail::def_init_aux(ClassT&, const Signature&, NArgs, const CallPoliciesT&, const char*, const keyword_range&) [with ClassT = boost::python::class_, not_specified, not_specified, not_specified>; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector9, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&>; NArgs = boost::mpl::size, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&> >; keyword_range = std::pair]’ /usr/include/boost/python/init.hpp:377:31: required from ‘static void boost::python::detail::define_class_init_helper<0>::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, const boost::python::detail::keyword_range&) [with ClassT = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector9, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&>; NArgs = boost::mpl::size, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&> >; boost::python::detail::keyword_range = std::pair]’ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>; DerivedT = boost::python::init, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_>]’ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >; classT = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>; DerivedVisitor = boost::python::init, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_>]’ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_>; W = scitbx::lbfgsb::minimizer; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ /<>/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:20:13: required from ‘static void scitbx::lbfgsb::{anonymous}::minimizer_wrappers::wrap() [with FloatType = double]’ /<>/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:112:37: required from here /<>/scitbx/lbfgsb.h:118:32: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 118 | SCITBX_ASSERT(l.size() == n); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/lbfgsb.h:118:9: note: in expansion of macro ‘SCITBX_ASSERT’ 118 | SCITBX_ASSERT(l.size() == n); | ^~~~~~~~~~~~~ /<>/scitbx/lbfgsb.h:119:32: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 119 | SCITBX_ASSERT(u.size() == n); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/lbfgsb.h:119:9: note: in expansion of macro ‘SCITBX_ASSERT’ 119 | SCITBX_ASSERT(u.size() == n); | ^~~~~~~~~~~~~ /<>/scitbx/lbfgsb.h:120:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 120 | SCITBX_ASSERT(nbd.size() == n); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/lbfgsb.h:120:9: note: in expansion of macro ‘SCITBX_ASSERT’ 120 | SCITBX_ASSERT(nbd.size() == n); | ^~~~~~~~~~~~~ g++ -o lib/scitbx_lbfgs_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_lbfgs_ext.so.0 scitbx/lbfgs/ext.o scitbx/lbfgs/lbfgs_fem.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o scitbx/linalg/boost_python/cholesky.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/linalg/boost_python/cholesky.cpp Create symlinks for: 'lib/scitbx_lbfgs_ext.so.0.0.1' 'lib/scitbx_lbfgs_ext.so.0'->'lib/scitbx_lbfgs_ext.so.0.0.1' 'lib/scitbx_lbfgs_ext.so'->'lib/scitbx_lbfgs_ext.so.0.0.1' g++ -o scitbx/linalg/boost_python/householder.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/linalg/boost_python/householder.cpp g++ -o lib/scitbx_lbfgsb_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_lbfgsb_ext.so.0 scitbx/lbfgsb/boost_python/lbfgsb_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/scitbx_lbfgsb_ext.so.0.0.1' 'lib/scitbx_lbfgsb_ext.so.0'->'lib/scitbx_lbfgsb_ext.so.0.0.1' 'lib/scitbx_lbfgsb_ext.so'->'lib/scitbx_lbfgsb_ext.so.0.0.1' g++ -o scitbx/linalg/boost_python/svd.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/linalg/boost_python/svd.cpp g++ -o scitbx/linalg/boost_python/eigensystem.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/linalg/boost_python/eigensystem.cpp g++ -o scitbx/linalg/boost_python/lapack_fem_bpl.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/linalg/boost_python/lapack_fem_bpl.cpp g++ -o scitbx/lstbx/boost_python/lstbx_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/lstbx/boost_python/lstbx_ext.cpp g++ -o scitbx/lstbx/boost_python/normal_equations.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/lstbx/boost_python/normal_equations.cpp g++ -o scitbx/math/boost_python/math_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/math/boost_python/math_ext.cpp In file included from /<>/scitbx/error.h:16, from /<>/scitbx/mat3.h:5, from /<>/scitbx/sym_mat3.h:4, from /<>/scitbx/linalg/boost_python/lapack_fem_bpl.cpp:5: /<>/scitbx/linalg/boost_python/lapack_fem_bpl.cpp: In function ‘int scitbx::lapack::boost_python::dsyev_wrapper(const std::string&, const std::string&, const scitbx::af::ref >&, const scitbx::af::ref&, bool)’: /<>/scitbx/linalg/boost_python/lapack_fem_bpl.cpp:246:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 246 | SCITBX_ASSERT(w.size() == n); | ~~~~~~~~~^~~~ /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/linalg/boost_python/lapack_fem_bpl.cpp:246:5: note: in expansion of macro ‘SCITBX_ASSERT’ 246 | SCITBX_ASSERT(w.size() == n); | ^~~~~~~~~~~~~ g++ -o lib/scitbx_linalg_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_linalg_ext.so.0 scitbx/linalg/boost_python/linalg_ext.o scitbx/linalg/boost_python/matrix.o scitbx/linalg/boost_python/cholesky.o scitbx/linalg/boost_python/householder.o scitbx/linalg/boost_python/svd.o scitbx/linalg/boost_python/eigensystem.o scitbx/linalg/boost_python/lapack_fem_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/scitbx_array_family_flex_ext.so.0.0.1' 'lib/scitbx_array_family_flex_ext.so.0'->'lib/scitbx_array_family_flex_ext.so.0.0.1' 'lib/scitbx_array_family_flex_ext.so'->'lib/scitbx_array_family_flex_ext.so.0.0.1' g++ -o scitbx/math/boost_python/basic_statistics.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/math/boost_python/basic_statistics.cpp Create symlinks for: 'lib/scitbx_linalg_ext.so.0.0.1' 'lib/scitbx_linalg_ext.so.0'->'lib/scitbx_linalg_ext.so.0.0.1' 'lib/scitbx_linalg_ext.so'->'lib/scitbx_linalg_ext.so.0.0.1' g++ -o scitbx/math/boost_python/gaussian.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/math/boost_python/gaussian.cpp g++ -o scitbx/math/boost_python/golay.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/math/boost_python/golay.cpp g++ -o scitbx/math/boost_python/minimum_covering_sphere.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/math/boost_python/minimum_covering_sphere.cpp g++ -o lib/scitbx_lstbx_normal_equations_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_lstbx_normal_equations_ext.so.0 scitbx/lstbx/boost_python/lstbx_ext.o scitbx/lstbx/boost_python/normal_equations.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/scitbx_lstbx_normal_equations_ext.so.0.0.1' 'lib/scitbx_lstbx_normal_equations_ext.so.0'->'lib/scitbx_lstbx_normal_equations_ext.so.0.0.1' 'lib/scitbx_lstbx_normal_equations_ext.so'->'lib/scitbx_lstbx_normal_equations_ext.so.0.0.1' g++ -o scitbx/math/boost_python/principal_axes_of_inertia.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/math/boost_python/principal_axes_of_inertia.cpp g++ -o scitbx/math/boost_python/row_echelon.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/math/boost_python/row_echelon.cpp g++ -o scitbx/math/boost_python/tensor_rank_2.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security 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-O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/math/boost_python/zernike.cpp g++ -o scitbx/math/boost_python/zernike_moments.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/math/boost_python/zernike_moments.cpp g++ -o scitbx/math/boost_python/2d_zernike_moments.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/math/boost_python/2d_zernike_moments.cpp g++ -o scitbx/math/boost_python/weighted_covariance.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/math/boost_python/weighted_covariance.cpp g++ -o scitbx/math/boost_python/rotation.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/math/boost_python/rotation.cpp g++ -o scitbx/math/boost_python/interpolation.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/math/boost_python/interpolation.cpp g++ -o scitbx/math/boost_python/tetrahedron.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/math/boost_python/tetrahedron.cpp g++ -o scitbx/math/boost_python/angle_derivative.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/math/boost_python/angle_derivative.cpp g++ -o scitbx/minpack/ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/minpack/ext.cpp In file included from /<>/scitbx/error.h:16, from /<>/scitbx/minpack/raw.h:4, from /<>/scitbx/minpack/levenberg_marquardt.h:4, from /<>/scitbx/minpack/ext.cpp:4: /<>/scitbx/minpack/levenberg_marquardt.h: In member function ‘void scitbx::minpack::levenberg_marquardt::process_fvec(const scitbx::af::const_ref&)’: /<>/scitbx/minpack/levenberg_marquardt.h:80:35: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 80 | SCITBX_ASSERT(fvec.size() == m); | ~~~~~~~~~~~~^~~~ /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/minpack/levenberg_marquardt.h:80:9: note: in expansion of macro ‘SCITBX_ASSERT’ 80 | SCITBX_ASSERT(fvec.size() == m); | ^~~~~~~~~~~~~ g++ -o scitbx/r3_utils_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/r3_utils_ext.cpp g++ -o scitbx/random/boost_python/random_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/random/boost_python/random_ext.cpp g++ -o lib/scitbx_math_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_math_ext.so.0 scitbx/math/boost_python/math_ext.o scitbx/math/boost_python/basic_statistics.o scitbx/math/boost_python/gaussian.o scitbx/math/boost_python/golay.o scitbx/math/boost_python/minimum_covering_sphere.o scitbx/math/boost_python/principal_axes_of_inertia.o scitbx/math/boost_python/row_echelon.o scitbx/math/boost_python/tensor_rank_2.o scitbx/math/boost_python/chebyshev.o scitbx/math/boost_python/icosahedron.o scitbx/math/boost_python/slatec.o scitbx/math/boost_python/line_search.o scitbx/math/boost_python/r3_rotation.o scitbx/math/boost_python/resample.o scitbx/math/boost_python/quadrature.o scitbx/math/boost_python/unimodular_generator.o scitbx/math/boost_python/halton.o scitbx/math/boost_python/least_squares_plane.o scitbx/math/boost_python/continued_fraction.o scitbx/math/boost_python/numeric_limits.o scitbx/math/boost_python/distributions.o scitbx/math/boost_python/exp_functions.o scitbx/math/boost_python/zernike.o scitbx/math/boost_python/zernike_moments.o scitbx/math/boost_python/2d_zernike_moments.o scitbx/math/boost_python/weighted_covariance.o scitbx/math/boost_python/rotation.o scitbx/math/boost_python/interpolation.o scitbx/math/boost_python/tetrahedron.o scitbx/math/boost_python/angle_derivative.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_slatec -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/scitbx_minpack_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_minpack_ext.so.0 scitbx/minpack/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_minpack -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o scitbx/random/boost_python/basic_distributions.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/random/boost_python/basic_distributions.cpp Create symlinks for: 'lib/scitbx_minpack_ext.so.0.0.1' 'lib/scitbx_minpack_ext.so.0'->'lib/scitbx_minpack_ext.so.0.0.1' 'lib/scitbx_minpack_ext.so'->'lib/scitbx_minpack_ext.so.0.0.1' g++ -o scitbx/rigid_body/ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/rigid_body/ext.cpp g++ -o lib/scitbx_r3_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_r3_utils_ext.so.0 scitbx/r3_utils_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/scitbx_r3_utils_ext.so.0.0.1' 'lib/scitbx_r3_utils_ext.so.0'->'lib/scitbx_r3_utils_ext.so.0.0.1' 'lib/scitbx_r3_utils_ext.so'->'lib/scitbx_r3_utils_ext.so.0.0.1' g++ -o scitbx/sparse/boost_python/vector.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/sparse/boost_python/vector.cpp In file included from /<>/scitbx/array_family/tiny_plain.h:6, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/vec3.h:4, from /<>/scitbx/mat3.h:6, from /<>/scitbx/rotr3.h:4, from /<>/scitbx/rigid_body/spatial_lib.h:4, from /<>/scitbx/rigid_body/featherstone.h:4, from /<>/scitbx/rigid_body/tardy.h:6, from /<>/scitbx/rigid_body/ext.cpp:14: /<>/scitbx/array_family/tiny.h: In instantiation of ‘scitbx::af::tiny::tiny(const OtherElementType*, const OtherElementType*) [with OtherElementType = double; ElementType = double; long unsigned int N = 4]’: /<>/scitbx/rigid_body/joint_lib.h:361:21: required from ‘scitbx::rotr3 scitbx::rigid_body::joint_lib::six_dof_aja_simplified(const scitbx::vec3&, const scitbx::af::const_ref&) [with FloatType = double]’ /<>/scitbx/rigid_body/ext.cpp:24:49: required from here /<>/scitbx/array_family/detail/tiny_helpers.h:148:20: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 148 | if (last - first != this->size()) throw_range_error(); \ | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny.h:30:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS’ 30 | SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS(tiny) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/scitbx/array_family/small.h:4, from /<>/scitbx/array_family/accessors/flex_grid.h:5, from /<>/scitbx/array_family/versa_matrix.h:6, from /<>/scitbx/rigid_body/spatial_lib.h:5: /<>/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const ElementType*, const ElementType*) [with ElementType = double; long unsigned int N = 6]’: /<>/scitbx/array_family/small.h:44:33: required from ‘scitbx::af::small::small(const ElementType*, const ElementType*) [with ElementType = double; long unsigned int N = 6]’ /<>/scitbx/rigid_body/featherstone.h:683:31: required from ‘scitbx::af::shared > scitbx::rigid_body::featherstone::system_model::inverse_dynamics(const scitbx::af::const_ref >&, const scitbx::af::const_ref >&, const scitbx::af::const_ref&) [with FloatType = double]’ /<>/scitbx/rigid_body/featherstone.h:705:21: required from ‘scitbx::af::shared scitbx::rigid_body::featherstone::system_model::inverse_dynamics_packed(const scitbx::af::const_ref&, const scitbx::af::const_ref&, const scitbx::af::const_ref&) [with FloatType = double]’ /<>/scitbx/rigid_body/ext.cpp:120:46: required from here /<>/scitbx/array_family/small_plain.h:59:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 59 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ In file included from /<>/scitbx/error.h:16, from /<>/scitbx/mat3.h:5: /<>/scitbx/rigid_body/tardy.h: In instantiation of ‘scitbx::af::shared > > scitbx::rigid_body::tardy::construct_bodies(const scitbx::af::const_ref >&, const scitbx::af::const_ref&, const boost::python::api::object&, const FloatType&) [with FloatType = double]’: /<>/scitbx/rigid_body/tardy.h:203:54: required from ‘scitbx::rigid_body::tardy::model::model(const boost::python::api::object&, const scitbx::af::shared >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, const ft&) [with FloatType = double; ft = double]’ /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2, A3, A4, A5) [with A0 = boost::python::objects::reference_to_value; A1 = boost::python::objects::reference_to_value >&>; A2 = boost::python::objects::reference_to_value&>; A3 = boost::python::objects::reference_to_value; A4 = boost::python::objects::reference_to_value; A5 = boost::python::objects::reference_to_value; Value = scitbx::rigid_body::tardy::model<>; PyObject = _object]’ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<6>::apply::execute(PyObject*, t0, t1, t2, t3, t4, t5) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::joint_view >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional >; PyObject = _object; t0 = const boost::python::api::object&; t1 = const scitbx::af::shared >&; t2 = const scitbx::af::shared&; t3 = const boost::python::api::object&; t4 = const boost::python::api::object&; t5 = const double&]’ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::joint_view >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional >; Arity = boost::mpl::size >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional > >; Holder = boost::python::objects::value_holder >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ /usr/include/boost/python/init.hpp:310:66: required from ‘void boost::python::detail::def_init_aux(ClassT&, const Signature&, NArgs, const CallPoliciesT&, const char*, const keyword_range&) [with ClassT = boost::python::class_, boost::python::bases >, boost::noncopyable_::noncopyable>; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::joint_view >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional >; NArgs = boost::mpl::size >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional > >; keyword_range = std::pair]’ /usr/include/boost/python/init.hpp:344:31: required from ‘static void boost::python::detail::define_class_init_helper::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, boost::python::detail::keyword_range) [with ClassT = boost::python::class_, boost::python::bases >, boost::noncopyable_::noncopyable>; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::joint_view >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional >; NArgs = boost::mpl::size >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional > >; int NDefaults = 1; boost::python::detail::keyword_range = std::pair]’ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_, boost::python::bases >, boost::noncopyable_::noncopyable>; DerivedT = boost::python::init >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional >]’ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional > >; classT = boost::python::class_, boost::python::bases >, boost::noncopyable_::noncopyable>]’ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_, boost::python::bases >, boost::noncopyable_::noncopyable>; DerivedVisitor = boost::python::init >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional >]’ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional >; W = scitbx::rigid_body::tardy::model<>; X1 = boost::python::bases >; X2 = boost::noncopyable_::noncopyable; X3 = boost::python::detail::not_specified; self = boost::python::class_, boost::python::bases >, boost::noncopyable_::noncopyable>]’ /<>/scitbx/rigid_body/ext.cpp:151:13: required from here /<>/scitbx/rigid_body/tardy.h:163:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 163 | SCITBX_ASSERT(body->parent < nc); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/rigid_body/tardy.h:163:9: note: in expansion of macro ‘SCITBX_ASSERT’ 163 | SCITBX_ASSERT(body->parent < nc); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/tiny.h: In instantiation of ‘scitbx::af::tiny::tiny(const OtherElementType*, const OtherElementType*) [with OtherElementType = double; ElementType = double; long unsigned int N = 1]’: /<>/scitbx/rigid_body/joint_lib.h:648:13: required from ‘boost::shared_ptr > scitbx::rigid_body::joint_lib::revolute::new_q(const scitbx::af::const_ref&) const [with FloatType = double]’ /<>/scitbx/rigid_body/joint_lib.h:643:5: required from here /<>/scitbx/array_family/detail/tiny_helpers.h:148:20: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 148 | if (last - first != this->size()) throw_range_error(); \ | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny.h:30:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS’ 30 | SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS(tiny) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny.h: In instantiation of ‘scitbx::af::tiny::tiny(const OtherElementType*, const OtherElementType*) [with OtherElementType = double; ElementType = double; long unsigned int N = 12]’: /<>/scitbx/rigid_body/joint_lib.h:45:16: required from ‘scitbx::af::tiny scitbx::rigid_body::joint_lib::rbda_eq_4_13(const scitbx::af::tiny&) [with FloatType = double]’ /<>/scitbx/rigid_body/joint_lib.h:279:21: required from ‘boost::shared_ptr > scitbx::rigid_body::joint_lib::six_dof::time_step_position(const scitbx::af::const_ref&, const ft&) const [with FloatType = double; ft = double]’ /<>/scitbx/rigid_body/joint_lib.h:271:5: required from here /<>/scitbx/array_family/detail/tiny_helpers.h:148:20: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 148 | if (last - first != this->size()) throw_range_error(); \ | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny.h:30:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS’ 30 | SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS(tiny) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny.h: In instantiation of ‘scitbx::af::tiny::tiny(const OtherElementType*, const OtherElementType*) [with OtherElementType = double; ElementType = double; long unsigned int N = 16]’: /<>/scitbx/rigid_body/joint_lib.h:79:16: required from ‘scitbx::af::tiny scitbx::rigid_body::joint_lib::d_unit_quaternion_d_qe_matrix(const scitbx::af::tiny&) [with FloatType = double]’ /<>/scitbx/rigid_body/joint_lib.h:317:58: required from ‘scitbx::af::small scitbx::rigid_body::joint_lib::six_dof::tau_as_d_e_pot_d_q(const scitbx::af::small&) const [with FloatType = double]’ /<>/scitbx/rigid_body/joint_lib.h:313:5: required from here /<>/scitbx/array_family/detail/tiny_helpers.h:148:20: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 148 | if (last - first != this->size()) throw_range_error(); \ | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny.h:30:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS’ 30 | SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS(tiny) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const ElementType*, const ElementType*) [with ElementType = double; long unsigned int N = 7]’: /<>/scitbx/array_family/small.h:44:33: required from ‘scitbx::af::small::small(const ElementType*, const ElementType*) [with ElementType = double; long unsigned int N = 7]’ /<>/scitbx/rigid_body/joint_lib.h:324:24: required from ‘scitbx::af::small scitbx::rigid_body::joint_lib::six_dof::tau_as_d_e_pot_d_q(const scitbx::af::small&) const [with FloatType = double]’ /<>/scitbx/rigid_body/joint_lib.h:313:5: required from here /<>/scitbx/array_family/small_plain.h:59:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 59 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ In file included from /<>/scitbx/array_family/versa_plain.h:5, from /<>/scitbx/array_family/versa.h:4, from /<>/scitbx/array_family/versa_matrix.h:4: /<>/scitbx/array_family/shared_plain.h: In member function ‘scitbx::af::shared_plain >::shared_plain(unsigned long const&)’: /<>/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/memory:69, from /usr/include/boost/config/no_tr1/memory.hpp:21, from /usr/include/boost/get_pointer.hpp:14, from /usr/include/boost/python/object/pointer_holder.hpp:11, from /usr/include/boost/python/to_python_indirect.hpp:10, from /usr/include/boost/python/converter/arg_to_python.hpp:10, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /<>/scitbx/boost_python/array_as_list.h:4, from /<>/scitbx/rigid_body/ext.cpp:3: /usr/include/c++/13/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const struct vec3 &’ to ‘std::uninitialized_fill_n*, unsigned long, scitbx::vec3 >(scitbx::vec3*, unsigned long, scitbx::vec3 const&)scitbx::vec3* [clone .isra.0]’ declared here 312 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘scitbx::af::shared_plain >::shared_plain(unsigned long const&)’: /<>/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const struct tiny &’ to ‘std::uninitialized_fill_n*, unsigned long, scitbx::af::tiny >(scitbx::af::tiny*, unsigned long, scitbx::af::tiny const&)scitbx::af::tiny* [clone .isra.0]’ declared here 312 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ In file included from /<>/scitbx/array_family/shared_plain.h:307: /<>/scitbx/array_family/detail/push_back_etc.h: In member function ‘scitbx::af::shared_plain >::resize(unsigned long const&)’: /<>/scitbx/array_family/detail/push_back_etc.h:175:15: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 175 | resize(new_size, ElementType()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const struct tiny &’ to ‘scitbx::af::shared_plain >::resize(unsigned long const&, scitbx::af::tiny const&) [clone .isra.0]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /<>/scitbx/array_family/detail/push_back_etc.h:175:26: note: ‘’ declared here 175 | resize(new_size, ElementType()); | ^~~~~~~~~~~~~ g++ -o lib/scitbx_random_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_random_ext.so.0 scitbx/random/boost_python/random_ext.o scitbx/random/boost_python/basic_distributions.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/scitbx_math_ext.so.0.0.1' 'lib/scitbx_math_ext.so.0'->'lib/scitbx_math_ext.so.0.0.1' 'lib/scitbx_math_ext.so'->'lib/scitbx_math_ext.so.0.0.1' g++ -o scitbx/sparse/boost_python/matrix.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/sparse/boost_python/matrix.cpp Create symlinks for: 'lib/scitbx_random_ext.so.0.0.1' 'lib/scitbx_random_ext.so.0'->'lib/scitbx_random_ext.so.0.0.1' 'lib/scitbx_random_ext.so'->'lib/scitbx_random_ext.so.0.0.1' g++ -o scitbx/sparse/boost_python/approx_equal.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/sparse/boost_python/approx_equal.cpp g++ -o lib/scitbx_rigid_body_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_rigid_body_ext.so.0 scitbx/rigid_body/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o scitbx/sparse/boost_python/random.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/sparse/boost_python/random.cpp g++ -o scitbx/sparse/boost_python/lu_factorization.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/sparse/boost_python/lu_factorization.cpp Create symlinks for: 'lib/scitbx_rigid_body_ext.so.0.0.1' 'lib/scitbx_rigid_body_ext.so.0'->'lib/scitbx_rigid_body_ext.so.0.0.1' 'lib/scitbx_rigid_body_ext.so'->'lib/scitbx_rigid_body_ext.so.0.0.1' g++ -o scitbx/sparse/boost_python/sparse_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/sparse/boost_python/sparse_ext.cpp g++ -o scitbx/stl/map_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/stl/map_ext.cpp g++ -o scitbx/stl/set_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/stl/set_ext.cpp g++ -o scitbx/stl/vector_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/stl/vector_ext.cpp g++ -o lib/scitbx_sparse_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_sparse_ext.so.0 scitbx/sparse/boost_python/vector.o scitbx/sparse/boost_python/matrix.o scitbx/sparse/boost_python/approx_equal.o scitbx/sparse/boost_python/random.o scitbx/sparse/boost_python/lu_factorization.o scitbx/sparse/boost_python/sparse_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm In file included from /<>/scitbx/stl/set_ext.cpp:1: /<>/scitbx/stl/set_wrapper.h: In static member function ‘static void scitbx::stl::boost_python::set_wrapper::wrap(const std::string&)’: /<>/scitbx/stl/set_wrapper.h:52:28: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 52 | bp::class_ >(python_name.c_str()) | ^~~~~~~~ In file included from /usr/include/c++/13/memory:78, from /usr/include/boost/config/no_tr1/memory.hpp:21, from /usr/include/boost/get_pointer.hpp:14, from /usr/include/boost/python/object/pointer_holder.hpp:11, from /usr/include/boost/python/to_python_indirect.hpp:10, from /usr/include/boost/python/converter/arg_to_python.hpp:10, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /<>/scitbx/stl/set_wrapper.h:4: /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_ptr.hpp:25, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::set, std::allocator >; ConversionPolicy = scitbx::boost_python::container_conversions::set_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::set, std::allocator >; ConversionPolicy = scitbx::boost_python::container_conversions::set_policy]’ /<>/scitbx/stl/set_wrapper.h:68:52: required from ‘static void scitbx::stl::boost_python::set_wrapper::wrap(const std::string&) [with ElementType = unsigned int; std::string = std::__cxx11::basic_string]’ /<>/scitbx/stl/set_ext.cpp:9:32: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::set, std::less >, std::allocator > >; ConversionPolicy = scitbx::boost_python::container_conversions::set_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::set, std::less >, std::allocator > >; ConversionPolicy = scitbx::boost_python::container_conversions::set_policy]’ /<>/scitbx/stl/set_wrapper.h:68:52: required from ‘static void scitbx::stl::boost_python::set_wrapper::wrap(const std::string&) [with ElementType = std::__cxx11::basic_string; std::string = std::__cxx11::basic_string]’ /<>/scitbx/stl/set_ext.cpp:10:35: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_ptr.hpp:25, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /<>/scitbx/stl/vector_wrapper.h:4, from /<>/scitbx/stl/vector_ext.cpp:2: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::vector >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::vector >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/stl/vector_wrapper.h:121:52: required from ‘static void scitbx::stl::boost_python::vector_wrapper::wrap(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ /<>/scitbx/stl/vector_ext.cpp:10:35: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::vector >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::vector >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/stl/vector_wrapper.h:121:52: required from ‘static void scitbx::stl::boost_python::vector_wrapper::wrap(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ /<>/scitbx/stl/vector_ext.cpp:11:33: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::vector, std::allocator > >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::vector, std::allocator > >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/stl/vector_wrapper.h:121:52: required from ‘static void scitbx::stl::boost_python::vector_wrapper::wrap(const std::string&) [with ElementType = std::set; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ /<>/scitbx/stl/vector_ext.cpp:14:50: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] g++ -o lib/scitbx_stl_set_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_stl_set_ext.so.0 scitbx/stl/set_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/scitbx_sparse_ext.so.0.0.1' 'lib/scitbx_sparse_ext.so.0'->'lib/scitbx_sparse_ext.so.0.0.1' 'lib/scitbx_sparse_ext.so'->'lib/scitbx_sparse_ext.so.0.0.1' g++ -o scitbx/suffixtree/boost_python/suffixtree_shared_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/suffixtree/boost_python/suffixtree_shared_ext.cpp Create symlinks for: 'lib/scitbx_stl_set_ext.so.0.0.1' 'lib/scitbx_stl_set_ext.so.0'->'lib/scitbx_stl_set_ext.so.0.0.1' 'lib/scitbx_stl_set_ext.so'->'lib/scitbx_stl_set_ext.so.0.0.1' g++ -o scitbx/suffixtree/boost_python/suffixtree_single_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/suffixtree/boost_python/suffixtree_single_ext.cpp g++ -o lib/scitbx_suffixtree_shared_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_suffixtree_shared_ext.so.0 scitbx/suffixtree/boost_python/suffixtree_shared_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/scitbx_suffixtree_shared_ext.so.0.0.1' 'lib/scitbx_suffixtree_shared_ext.so.0'->'lib/scitbx_suffixtree_shared_ext.so.0.0.1' 'lib/scitbx_suffixtree_shared_ext.so'->'lib/scitbx_suffixtree_shared_ext.so.0.0.1' g++ -o scitbx/suffixtree/boost_python/object_extensions.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/suffixtree/boost_python/object_extensions.cpp g++ -o lib/scitbx_stl_vector_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_stl_vector_ext.so.0 scitbx/stl/vector_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o scitbx/wigner/ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/wigner/ext.cpp g++ -o lib/scitbx_stl_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_stl_map_ext.so.0 scitbx/stl/map_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/scitbx_stl_vector_ext.so.0.0.1' 'lib/scitbx_stl_vector_ext.so.0'->'lib/scitbx_stl_vector_ext.so.0.0.1' 'lib/scitbx_stl_vector_ext.so'->'lib/scitbx_stl_vector_ext.so.0.0.1' g++ -o smtbx/ab_initio/ab_initio_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/smtbx/ab_initio/ab_initio_ext.cpp Create symlinks for: 'lib/scitbx_stl_map_ext.so.0.0.1' 'lib/scitbx_stl_map_ext.so.0'->'lib/scitbx_stl_map_ext.so.0.0.1' 'lib/scitbx_stl_map_ext.so'->'lib/scitbx_stl_map_ext.so.0.0.1' g++ -o smtbx/array_family/af_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/smtbx/array_family/af_ext.cpp g++ -o lib/scitbx_wigner_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_wigner_ext.so.0 scitbx/wigner/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/smtbx_ab_initio_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_ab_initio_ext.so.0 smtbx/ab_initio/ab_initio_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/smtbx_ab_initio_ext.so.0.0.1' 'lib/smtbx_ab_initio_ext.so.0'->'lib/smtbx_ab_initio_ext.so.0.0.1' 'lib/smtbx_ab_initio_ext.so'->'lib/smtbx_ab_initio_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/boost_python/affine.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/smtbx/refinement/constraints/boost_python/affine.cpp g++ -o lib/smtbx_array_family_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_array_family_ext.so.0 smtbx/array_family/af_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/scitbx_wigner_ext.so.0.0.1' 'lib/scitbx_wigner_ext.so.0'->'lib/scitbx_wigner_ext.so.0.0.1' 'lib/scitbx_wigner_ext.so'->'lib/scitbx_wigner_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/boost_python/constraints_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/smtbx/refinement/constraints/boost_python/constraints_ext.cpp Create symlinks for: 'lib/smtbx_array_family_ext.so.0.0.1' 'lib/smtbx_array_family_ext.so.0'->'lib/smtbx_array_family_ext.so.0.0.1' 'lib/smtbx_array_family_ext.so'->'lib/smtbx_array_family_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/boost_python/direction.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/smtbx/refinement/constraints/boost_python/direction.cpp g++ -o smtbx/refinement/constraints/boost_python/geometrical_hydrogens.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/smtbx/refinement/constraints/boost_python/geometrical_hydrogens.cpp g++ -o lib/scitbx_suffixtree_single_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_suffixtree_single_ext.so.0 scitbx/suffixtree/boost_python/suffixtree_single_ext.o scitbx/suffixtree/boost_python/object_extensions.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o smtbx/refinement/constraints/boost_python/independent_scalar_parameters.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/smtbx/refinement/constraints/boost_python/independent_scalar_parameters.cpp Create symlinks for: 'lib/scitbx_suffixtree_single_ext.so.0.0.1' 'lib/scitbx_suffixtree_single_ext.so.0'->'lib/scitbx_suffixtree_single_ext.so.0.0.1' 'lib/scitbx_suffixtree_single_ext.so'->'lib/scitbx_suffixtree_single_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/boost_python/occupancy.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/smtbx/refinement/constraints/boost_python/occupancy.cpp g++ -o smtbx/refinement/constraints/boost_python/reparametrisation.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/smtbx/refinement/constraints/boost_python/reparametrisation.cpp g++ -o smtbx/refinement/constraints/boost_python/rigid.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/smtbx/refinement/constraints/boost_python/rigid.cpp g++ -o smtbx/refinement/constraints/boost_python/same_group.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/smtbx/refinement/constraints/boost_python/same_group.cpp g++ -o smtbx/refinement/constraints/boost_python/scaled_adp.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/smtbx/refinement/constraints/boost_python/scaled_adp.cpp g++ -o smtbx/refinement/constraints/boost_python/scatterer_parameters.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/smtbx/refinement/constraints/boost_python/scatterer_parameters.cpp g++ -o smtbx/refinement/constraints/boost_python/shared.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/smtbx/refinement/constraints/boost_python/shared.cpp g++ -o smtbx/refinement/constraints/boost_python/special_position.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/smtbx/refinement/constraints/boost_python/special_position.cpp g++ -o smtbx/refinement/constraints/boost_python/symmetry_equivalent.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/smtbx/refinement/constraints/boost_python/symmetry_equivalent.cpp g++ -o smtbx/refinement/constraints/boost_python/u_eq_dependent_u_iso.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/smtbx/refinement/constraints/boost_python/u_eq_dependent_u_iso.cpp g++ -o smtbx/refinement/constraints/boost_python/u_iso_dependent_u_iso.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/smtbx/refinement/constraints/boost_python/u_iso_dependent_u_iso.cpp g++ -o smtbx/refinement/boost_python/least_squares_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/smtbx/refinement/boost_python/least_squares_ext.cpp g++ -o smtbx/refinement/boost_python/weighting_schemes.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/smtbx/refinement/boost_python/weighting_schemes.cpp g++ -o smtbx/refinement/boost_python/least_squares.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/smtbx/refinement/boost_python/least_squares.cpp g++ -o smtbx/refinement/restraints/boost_python/origin_fixing.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/smtbx/refinement/restraints/boost_python/origin_fixing.cpp g++ -o lib/smtbx_refinement_constraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_refinement_constraints_ext.so.0 smtbx/refinement/constraints/boost_python/affine.o smtbx/refinement/constraints/boost_python/constraints_ext.o smtbx/refinement/constraints/boost_python/direction.o smtbx/refinement/constraints/boost_python/geometrical_hydrogens.o smtbx/refinement/constraints/boost_python/independent_scalar_parameters.o smtbx/refinement/constraints/boost_python/occupancy.o smtbx/refinement/constraints/boost_python/reparametrisation.o smtbx/refinement/constraints/boost_python/rigid.o smtbx/refinement/constraints/boost_python/same_group.o smtbx/refinement/constraints/boost_python/scaled_adp.o smtbx/refinement/constraints/boost_python/scatterer_parameters.o smtbx/refinement/constraints/boost_python/shared.o smtbx/refinement/constraints/boost_python/special_position.o smtbx/refinement/constraints/boost_python/symmetry_equivalent.o smtbx/refinement/constraints/boost_python/u_eq_dependent_u_iso.o smtbx/refinement/constraints/boost_python/u_iso_dependent_u_iso.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lsmtbx_refinement_constraints -lscitbx_boost_python -lcctbx -lboost_thread -lboost_system -lboost_python312 -lm g++ -o smtbx/refinement/restraints/boost_python/restraints_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/smtbx/refinement/restraints/boost_python/restraints_ext.cpp g++ -o smtbx/stl/map_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/smtbx/stl/map_ext.cpp Create symlinks for: 'lib/smtbx_refinement_constraints_ext.so.0.0.1' 'lib/smtbx_refinement_constraints_ext.so.0'->'lib/smtbx_refinement_constraints_ext.so.0.0.1' 'lib/smtbx_refinement_constraints_ext.so'->'lib/smtbx_refinement_constraints_ext.so.0.0.1' g++ -o smtbx/structure_factors/direct/boost_python/ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/smtbx/structure_factors/direct/boost_python/ext.cpp g++ -o smtbx/structure_factors/direct/boost_python/standard_xray.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/smtbx/structure_factors/direct/boost_python/standard_xray.cpp g++ -o lib/smtbx_stl_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_stl_map_ext.so.0 smtbx/stl/map_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/smtbx_stl_map_ext.so.0.0.1' 'lib/smtbx_stl_map_ext.so.0'->'lib/smtbx_stl_map_ext.so.0.0.1' 'lib/smtbx_stl_map_ext.so'->'lib/smtbx_stl_map_ext.so.0.0.1' g++ -o spotfinder/array_family/flex_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/<>/dxtbx/src -I/usr/include/python3.12 -Ispotfinder/array_family/src -I/<>/spotfinder/array_family/src -Ispotfinder/array_family/include -I/<>/spotfinder/array_family/include /<>/spotfinder/array_family/flex_ext.cpp g++ -o spotfinder/array_family/flex_distl_spot.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/<>/dxtbx/src -I/usr/include/python3.12 -Ispotfinder/array_family/src -I/<>/spotfinder/array_family/src -Ispotfinder/array_family/include -I/<>/spotfinder/array_family/include /<>/spotfinder/array_family/flex_distl_spot.cpp g++ -o lib/smtbx_refinement_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_refinement_restraints_ext.so.0 smtbx/refinement/restraints/boost_python/origin_fixing.o smtbx/refinement/restraints/boost_python/restraints_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/smtbx_refinement_restraints_ext.so.0.0.1' 'lib/smtbx_refinement_restraints_ext.so.0'->'lib/smtbx_refinement_restraints_ext.so.0.0.1' 'lib/smtbx_refinement_restraints_ext.so'->'lib/smtbx_refinement_restraints_ext.so.0.0.1' g++ -o spotfinder/core_toolbox/boost_python/distltbx_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/<>/dxtbx/src -I/usr/include/python3.12 -Ispotfinder/core_toolbox/boost_python/src -I/<>/spotfinder/core_toolbox/boost_python/src -Ispotfinder/core_toolbox/boost_python/include -I/<>/spotfinder/core_toolbox/boost_python/include /<>/spotfinder/core_toolbox/boost_python/distltbx_ext.cpp g++ -o lib/smtbx_refinement_least_squares_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_refinement_least_squares_ext.so.0 smtbx/refinement/boost_python/least_squares_ext.o smtbx/refinement/boost_python/weighting_schemes.o smtbx/refinement/boost_python/least_squares.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lsmtbx_refinement_constraints -lscitbx_boost_python -lcctbx -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/smtbx_refinement_least_squares_ext.so.0.0.1' 'lib/smtbx_refinement_least_squares_ext.so.0'->'lib/smtbx_refinement_least_squares_ext.so.0.0.1' 'lib/smtbx_refinement_least_squares_ext.so'->'lib/smtbx_refinement_least_squares_ext.so.0.0.1' g++ -o spotfinder/diffraction/geometry.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/<>/dxtbx/src -I/usr/include/python3.12 -Ispotfinder/core_toolbox/boost_python/src -I/<>/spotfinder/core_toolbox/boost_python/src -Ispotfinder/core_toolbox/boost_python/include -I/<>/spotfinder/core_toolbox/boost_python/include /<>/spotfinder/diffraction/geometry.cpp g++ -o lib/smtbx_structure_factors_direct_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_structure_factors_direct_ext.so.0 smtbx/structure_factors/direct/boost_python/ext.o smtbx/structure_factors/direct/boost_python/standard_xray.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lboost_thread -lboost_system -lboost_python312 -lm g++ -o spotfinder/dxtbx_toolbox/ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/<>/dxtbx/src -I/usr/include/python3.12 -Ispotfinder/dxtbx_toolbox/src -I/<>/spotfinder/dxtbx_toolbox/src -Ispotfinder/dxtbx_toolbox/include -I/<>/spotfinder/dxtbx_toolbox/include /<>/spotfinder/dxtbx_toolbox/ext.cpp Create symlinks for: 'lib/smtbx_structure_factors_direct_ext.so.0.0.1' 'lib/smtbx_structure_factors_direct_ext.so.0'->'lib/smtbx_structure_factors_direct_ext.so.0.0.1' 'lib/smtbx_structure_factors_direct_ext.so'->'lib/smtbx_structure_factors_direct_ext.so.0.0.1' g++ -o spotfinder/core_toolbox/boost_python/hough_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/<>/annlib_adaptbx/include -I/<>/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/<>/dxtbx/src -I/usr/include/python3.12 -Ispotfinder/core_toolbox/boost_python/src -I/<>/spotfinder/core_toolbox/boost_python/src -Ispotfinder/core_toolbox/boost_python/include -I/<>/spotfinder/core_toolbox/boost_python/include /<>/spotfinder/core_toolbox/boost_python/hough_ext.cpp g++ -o lib/spotfinder_distltbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=spotfinder_distltbx_ext.so.0 spotfinder/core_toolbox/boost_python/distltbx_ext.o spotfinder/diffraction/geometry.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lspotfinder -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/spotfinder_array_family_flex_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=spotfinder_array_family_flex_ext.so.0 spotfinder/array_family/flex_ext.o spotfinder/array_family/flex_distl_spot.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lspotfinder -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/spotfinder_hough_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=spotfinder_hough_ext.so.0 spotfinder/core_toolbox/boost_python/hough_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lspotfinder -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/spotfinder_distltbx_ext.so.0.0.1' 'lib/spotfinder_distltbx_ext.so.0'->'lib/spotfinder_distltbx_ext.so.0.0.1' 'lib/spotfinder_distltbx_ext.so'->'lib/spotfinder_distltbx_ext.so.0.0.1' g++ -o lib/std_pair_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=std_pair_ext.so.0 boost_adaptbx/std_pair_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/spotfinder_hough_ext.so.0.0.1' 'lib/spotfinder_hough_ext.so.0'->'lib/spotfinder_hough_ext.so.0.0.1' 'lib/spotfinder_hough_ext.so'->'lib/spotfinder_hough_ext.so.0.0.1' g++ -o mmtbx/masks/tst_mask.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/mmtbx/masks/tst_mask.cpp Create symlinks for: 'lib/std_pair_ext.so.0.0.1' 'lib/std_pair_ext.so.0'->'lib/std_pair_ext.so.0.0.1' 'lib/std_pair_ext.so'->'lib/std_pair_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/regression_test_ext.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/usr/include/python3.12 /<>/scitbx/array_family/boost_python/regression_test_ext.cpp g++ -o lib/spotfinder_dxtbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=spotfinder_dxtbx_ext.so.0 spotfinder/dxtbx_toolbox/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -ldxtbxspotfinder -lspotfinder -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_ptr.hpp:25, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /usr/include/boost/python/list.hpp:10, from /<>/scitbx/boost_python/container_conversions.h:4, from /<>/scitbx/array_family/boost_python/regression_test_ext.cpp:7: /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::vector; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::vector; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ /<>/scitbx/array_family/boost_python/regression_test_ext.cpp:156:78: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::__cxx11::list; ConversionPolicy = scitbx::boost_python::container_conversions::linked_list_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::__cxx11::list; ConversionPolicy = scitbx::boost_python::container_conversions::linked_list_policy]’ /<>/scitbx/array_family/boost_python/regression_test_ext.cpp:160:72: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = boost::array; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = boost::array; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/array_family/boost_python/regression_test_ext.cpp:164:71: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = boost::array; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = boost::array; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ /<>/scitbx/array_family/boost_python/regression_test_ext.cpp:168:71: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] /<>/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /<>/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ /<>/scitbx/array_family/boost_python/regression_test_ext.cpp:172:75: required from here /<>/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] Create symlinks for: 'lib/spotfinder_array_family_flex_ext.so.0.0.1' 'lib/spotfinder_array_family_flex_ext.so.0'->'lib/spotfinder_array_family_flex_ext.so.0.0.1' 'lib/spotfinder_array_family_flex_ext.so'->'lib/spotfinder_array_family_flex_ext.so.0.0.1' g++ -o scitbx/array_family/tst_accessors.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/<>/scitbx/array_family /<>/scitbx/array_family/tst_accessors.cpp Create symlinks for: 'lib/spotfinder_dxtbx_ext.so.0.0.1' 'lib/spotfinder_dxtbx_ext.so.0'->'lib/spotfinder_dxtbx_ext.so.0.0.1' 'lib/spotfinder_dxtbx_ext.so'->'lib/spotfinder_dxtbx_ext.so.0.0.1' In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/array_family/small_plain.h:4, from /<>/scitbx/array_family/small.h:4, from /<>/scitbx/array_family/accessors/flex_grid.h:5, from /<>/scitbx/array_family/flex_types.h:6, from /<>/scitbx/array_family/tst_accessors.cpp:1: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/array_family/tst_af_1.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/<>/scitbx/array_family /<>/scitbx/array_family/tst_af_1.cpp /<>/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/scitbx/array_family/tst_accessors.cpp:15: /<>/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::c_grid<1>]’: /<>/scitbx/array_family/tst_accessors.cpp:127:11: required from here /<>/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 17 | if (v[i] != a[i]) { | ~~~~~^~~~~ /<>/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::c_grid<4>]’: /<>/scitbx/array_family/tst_accessors.cpp:145:11: required from here /<>/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] /<>/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::c_grid<2>]’: /<>/scitbx/array_family/tst_accessors.cpp:172:11: required from here /<>/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] /<>/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::c_grid<3>]’: /<>/scitbx/array_family/tst_accessors.cpp:202:11: required from here /<>/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] /<>/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::tiny]’: /<>/scitbx/array_family/tst_accessors.cpp:248:11: required from here /<>/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] /<>/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::tiny]’: /<>/scitbx/array_family/tst_accessors.cpp:280:11: required from here /<>/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] /<>/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::tiny]’: /<>/scitbx/array_family/tst_accessors.cpp:326:11: required from here /<>/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] /<>/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::tiny]’: /<>/scitbx/array_family/tst_accessors.cpp:371:11: required from here /<>/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/.pybuild/cpython3_3.12/build_/include/scitbx/array_family/tiny_plain_apply.h:15, from /<>/scitbx/array_family/tst_af_1.cpp:1: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9, from /usr/include/boost/smart_ptr/scoped_array.hpp:13, from /usr/include/boost/scoped_array.hpp:13, from /<>/scitbx/array_family/ref.h:10: /usr/include/boost/bind.hpp: At global scope: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tst_af_1.cpp: In instantiation of ‘static void {anonymous}::array_exercise::run_2() [with ArrayType = scitbx::af::small_plain]’: /<>/scitbx/array_family/tst_af_1.cpp:29:12: required from ‘static void {anonymous}::array_exercise::run() [with ArrayType = scitbx::af::small_plain]’ /<>/scitbx/array_family/tst_af_1.cpp:619:52: required from here /<>/scitbx/array_family/tst_af_1.cpp:70:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | for(int i=0;i>/scitbx/array_family/tst_af_1.cpp: In instantiation of ‘static void {anonymous}::array_exercise::run_2() [with ArrayType = scitbx::af::small]’: /<>/scitbx/array_family/tst_af_1.cpp:29:12: required from ‘static void {anonymous}::array_exercise::run() [with ArrayType = scitbx::af::small]’ /<>/scitbx/array_family/tst_af_1.cpp:621:46: required from here /<>/scitbx/array_family/tst_af_1.cpp:70:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] /<>/scitbx/array_family/tst_af_1.cpp: In instantiation of ‘static void {anonymous}::array_exercise::run_2() [with ArrayType = scitbx::af::shared_plain]’: /<>/scitbx/array_family/tst_af_1.cpp:29:12: required from ‘static void {anonymous}::array_exercise::run() [with ArrayType = scitbx::af::shared_plain]’ /<>/scitbx/array_family/tst_af_1.cpp:624:48: required from here /<>/scitbx/array_family/tst_af_1.cpp:70:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] /<>/scitbx/array_family/tst_af_1.cpp: In instantiation of ‘static void {anonymous}::array_exercise::run_2() [with ArrayType = scitbx::af::shared]’: /<>/scitbx/array_family/tst_af_1.cpp:29:12: required from ‘static void {anonymous}::array_exercise::run() [with ArrayType = scitbx::af::shared]’ /<>/scitbx/array_family/tst_af_1.cpp:629:42: required from here /<>/scitbx/array_family/tst_af_1.cpp:70:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] /<>/scitbx/array_family/tst_af_1.cpp: In instantiation of ‘static void {anonymous}::versa_exercise::run_1() [with ArrayType = scitbx::af::versa_plain; AltArrayType = scitbx::af::versa_plain >]’: /<>/scitbx/array_family/tst_af_1.cpp:415:12: required from ‘static void {anonymous}::versa_exercise::run() [with ArrayType = scitbx::af::versa_plain; AltArrayType = scitbx::af::versa_plain >]’ /<>/scitbx/array_family/tst_af_1.cpp:635:64: required from here /<>/scitbx/array_family/tst_af_1.cpp:437:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 437 | check_true(__LINE__, a2.end() - a2.begin() == a2.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/scitbx/array_family/tst_af_1.cpp:438:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 438 | check_true(__LINE__, a3.end() - a3.begin() == a3.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/scitbx/array_family/tst_af_1.cpp:439:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 439 | check_true(__LINE__, a4.end() - a4.begin() == a4.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/scitbx/array_family/tst_af_1.cpp:440:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 440 | check_true(__LINE__, a5.end() - a5.begin() == a5.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/scitbx/array_family/tst_af_1.cpp:441:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 441 | check_true(__LINE__, a6.end() - a6.begin() == a6.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/scitbx/array_family/tst_af_1.cpp: In instantiation of ‘static void {anonymous}::versa_exercise::run_1() [with ArrayType = scitbx::af::versa; AltArrayType = scitbx::af::versa >]’: /<>/scitbx/array_family/tst_af_1.cpp:415:12: required from ‘static void {anonymous}::versa_exercise::run() [with ArrayType = scitbx::af::versa; AltArrayType = scitbx::af::versa >]’ /<>/scitbx/array_family/tst_af_1.cpp:637:58: required from here /<>/scitbx/array_family/tst_af_1.cpp:437:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 437 | check_true(__LINE__, a2.end() - a2.begin() == a2.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/scitbx/array_family/tst_af_1.cpp:438:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 438 | check_true(__LINE__, a3.end() - a3.begin() == a3.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/scitbx/array_family/tst_af_1.cpp:439:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 439 | check_true(__LINE__, a4.end() - a4.begin() == a4.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/scitbx/array_family/tst_af_1.cpp:440:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 440 | check_true(__LINE__, a5.end() - a5.begin() == a5.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/scitbx/array_family/tst_af_1.cpp:441:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 441 | check_true(__LINE__, a6.end() - a6.begin() == a6.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /<>/.pybuild/cpython3_3.12/build_/include/scitbx/array_family/small_plain_apply.h:15, from /<>/scitbx/array_family/tst_af_1.cpp:3: /<>/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const ElementType*, const ElementType*) [with ElementType = int; long unsigned int N = 128]’: /<>/scitbx/array_family/tst_af_1.cpp:41:17: required from ‘static void {anonymous}::array_exercise::run_1() [with ArrayType = scitbx::af::small_plain]’ /<>/scitbx/array_family/tst_af_1.cpp:28:12: required from ‘static void {anonymous}::array_exercise::run() [with ArrayType = scitbx::af::small_plain]’ /<>/scitbx/array_family/tst_af_1.cpp:619:52: required from here /<>/scitbx/array_family/small_plain.h:59:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 59 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ g++ -o mmtbx/masks/tst_mask -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread mmtbx/masks/tst_mask.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lmmtbx_masks -liotbx_pdb -lcctbx -lomptbx -lcctbx_sgtbx_asu -lm g++ -o scitbx/array_family/tst_af_2.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/<>/scitbx/array_family /<>/scitbx/array_family/tst_af_2.cpp In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/array_family/small_plain.h:4, from /<>/scitbx/array_family/small.h:4, from /<>/scitbx/array_family/accessors/flex_grid.h:5, from /<>/scitbx/array_family/tst_af_2.cpp:1: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/array_family/tst_accessors -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_accessors.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system g++ -o scitbx/array_family/boost_python/regression_test_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=regression_test_ext.so.0 scitbx/array_family/boost_python/regression_test_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm -lboost_numpy312 g++ -o scitbx/array_family/tst_af_2 -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_2.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system g++ -o scitbx/array_family/tst_af_3.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/<>/scitbx/array_family /<>/scitbx/array_family/tst_af_3.cpp g++ -o scitbx/array_family/tst_af_4.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/<>/scitbx/array_family /<>/scitbx/array_family/tst_af_4.cpp g++ -o scitbx/array_family/tst_af_1 -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_1.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/array_family/simple_io.h:5, from /<>/scitbx/array_family/tst_af_3.cpp:1: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/array_family/simple_io.h:5, from /<>/scitbx/array_family/tst_af_4.cpp:1: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Create symlinks for: 'scitbx/array_family/boost_python/regression_test_ext.so.0.0.1' 'scitbx/array_family/boost_python/regression_test_ext.so.0'->'scitbx/array_family/boost_python/regression_test_ext.so.0.0.1' 'scitbx/array_family/boost_python/regression_test_ext.so'->'scitbx/array_family/boost_python/regression_test_ext.so.0.0.1' g++ -o scitbx/array_family/tst_af_5.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/<>/scitbx/array_family /<>/scitbx/array_family/tst_af_5.cpp In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/array_family/simple_io.h:5, from /<>/scitbx/array_family/tst_af_5.cpp:1: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/array_family/tst_af_3 -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_3.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system g++ -o scitbx/array_family/tst_mat3.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/<>/scitbx/array_family /<>/scitbx/array_family/tst_mat3.cpp In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/vec3.h:4, from /<>/scitbx/mat3.h:6, from /<>/scitbx/array_family/tst_mat3.cpp:2: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/array_family/tst_af_5 -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_5.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lm g++ -o scitbx/array_family/tst_optional_copy.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/<>/scitbx/array_family /<>/scitbx/array_family/tst_optional_copy.cpp In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/array_family/shared_plain.h:31, from /<>/scitbx/array_family/versa_plain.h:5, from /<>/scitbx/array_family/versa.h:4, from /<>/scitbx/array_family/tst_optional_copy.cpp:1: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/array_family/tst_mat3 -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_mat3.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lm g++ -o scitbx/array_family/tst_rectangular_full_packed.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/<>/scitbx/array_family /<>/scitbx/array_family/tst_rectangular_full_packed.cpp In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/accessors/rectangular_full_packed.h:3, from /<>/scitbx/array_family/tst_rectangular_full_packed.cpp:1: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tst_rectangular_full_packed.cpp: In function ‘int main()’: /<>/scitbx/array_family/tst_rectangular_full_packed.cpp:52:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 52 | for(int i=0; i>/scitbx/array_family/tst_rectangular_full_packed.cpp:53:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 53 | for(int j=0; j>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/<>/scitbx/array_family /<>/scitbx/array_family/tst_ref_matrix_facet.cpp g++ -o scitbx/array_family/tst_rectangular_full_packed -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_rectangular_full_packed.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system g++ -o scitbx/array_family/tst_optional_copy -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_optional_copy.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system g++ -o scitbx/array_family/tst_sym_mat3.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/<>/scitbx/array_family /<>/scitbx/array_family/tst_sym_mat3.cpp In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/array_family/tst_ref_matrix_facet.cpp:1: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/vec3.h:4, from /<>/scitbx/mat3.h:6, from /<>/scitbx/sym_mat3.h:4, from /<>/scitbx/array_family/tst_sym_mat3.cpp:2: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/array_family/tst_unsigned_float_arithmetic.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/<>/scitbx/array_family /<>/scitbx/array_family/tst_unsigned_float_arithmetic.cpp g++ -o scitbx/array_family/tst_ref_matrix_facet -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_ref_matrix_facet.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/.pybuild/cpython3_3.12/build_/include/scitbx/array_family/tiny_algebra.h:14, from /<>/scitbx/array_family/tst_unsigned_float_arithmetic.cpp:3: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/array_family/tst_vec3.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/<>/scitbx/array_family /<>/scitbx/array_family/tst_vec3.cpp g++ -o scitbx/array_family/tst_unsigned_float_arithmetic -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_unsigned_float_arithmetic.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system g++ -o scitbx/error/tst_error.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -Iscitbx/error -I/<>/scitbx/error /<>/scitbx/error/tst_error.cpp g++ -o scitbx/array_family/tst_sym_mat3 -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_sym_mat3.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lm In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/vec3.h:4, from /<>/scitbx/array_family/tst_vec3.cpp:2: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/error/tst_error -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/error/tst_error.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system g++ -o scitbx/fftpack/timing/fftpack_timer.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/scitbx/fftpack/timing/fftpack_timer.cpp g++ -o scitbx/array_family/tst_vec3 -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_vec3.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lm g++ -o scitbx/fftpack/timing/test0.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/scitbx/fftpack/timing/test0.cpp In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/array_family/tiny_types.h:4, from /<>/scitbx/fftpack/factorization.h:4, from /<>/scitbx/fftpack/complex_to_complex.h:4, from /<>/scitbx/fftpack/timing/fftpack_timer.cpp:6: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/fftpack/factorization.h: In constructor ‘scitbx::fftpack::factorization::factorization(std::size_t, bool)’: /<>/scitbx/fftpack/factorization.h:64:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (i = 0; red_n > 1 && i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ /<>/scitbx/fftpack/factorization.h:67:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 67 | for (i = 0; i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/lbfgs/sdrive_fem.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -I/<>/fable scitbx/lbfgs/sdrive_fem.cpp In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/array_family/tiny_plain.h:4, from /<>/scitbx/array_family/tiny.h:4, from /<>/scitbx/array_family/tiny_types.h:4, from /<>/scitbx/fftpack/factorization.h:4, from /<>/scitbx/fftpack/complex_to_complex.h:4, from /<>/scitbx/fftpack/complex_to_complex_3d.h:4, from /<>/scitbx/fftpack/timing/test0.cpp:3: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/fftpack/factorization.h: In constructor ‘scitbx::fftpack::factorization::factorization(std::size_t, bool)’: /<>/scitbx/fftpack/factorization.h:64:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (i = 0; red_n > 1 && i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ /<>/scitbx/fftpack/factorization.h:67:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 67 | for (i = 0; i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/fable/fem/io.hpp:8, from /<>/fable/fem/close_chain.hpp:4, from /<>/fable/fem/common.hpp:4, from /<>/fable/fem/read.hpp:4, from /<>/fable/fem/major_types.hpp:6, from /<>/fable/fem.hpp:10, from /<>/.pybuild/cpython3_3.12/build_/include/scitbx/lbfgs_fem.hpp:1, from scitbx/lbfgs/sdrive_fem.cpp:1: /<>/fable/fem/utils/simple_streams.hpp: In member function ‘virtual void fem::utils::simple_ostream_to_char_ptr_and_size::put(char)’: /<>/fable/fem/utils/simple_streams.hpp:63:13: warning: comparison of integer expressions of different signedness: ‘fem::ssize_t’ {aka ‘long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 63 | if (i < sz) s[i++] = c; | ~~^~~~ /<>/fable/fem/common.hpp: In member function ‘void fem::common::getarg(int, fem::str_ref) const’: /<>/fable/fem/common.hpp:40:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 40 | if (pos < 0 || pos >= command_line_args.buffer.size()) { | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/fable/fem/utils/string_to_double_fmt.hpp:4, from /<>/fable/fem/read.hpp:9: /<>/fable/fem/utils/string_to_double.hpp: In member function ‘void fem::utils::string_to_double::convert(fem::utils::simple_istream&, unsigned int, int)’: /<>/fable/fem/utils/string_to_double.hpp:115:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 115 | if (dexp <= ad_hoc_limits::max_digit_count) { | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/fable/fem/read.hpp: In member function ‘double fem::read_loop::read_fmt_double()’: /<>/fable/fem/read.hpp:653:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 653 | if (iw+1 != ed.size()) { | ~~~~~^~~~~~~~~~~~ In file included from /<>/fable/fem/variant.hpp:5, from /<>/fable/fem/major_types.hpp:7: /<>/fable/fem/utils/equivalence.hpp: In member function ‘void fem::utils::equivalence::array_alignment::infer_diffs0_from_diff_matrix()’: /<>/fable/fem/utils/equivalence.hpp:93:28: warning: comparison of integer expressions of different signedness: ‘const fem::ssize_t’ {aka ‘const long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 93 | if (c0e[0] == i0) { | ~~~~~~~^~~~~ In file included from /<>/fable/fem/major_types.hpp:8: /<>/fable/fem/write.hpp: In destructor ‘fem::write_loop::~write_loop()’: /<>/fable/fem/write.hpp:704:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 704 | while (pos < internal_file_len) { | ~~~~^~~~~~~~~~~~~~~~~~~ g++ -o scitbx/lbfgs/sdrive_fem -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgs/sdrive_fem.o scitbx/lbfgs/lbfgs_fem.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lm g++ -o scitbx/fftpack/timing/fftpack_timer -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/fftpack/timing/fftpack_timer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system -lomptbx -lm g++ -o scitbx/lbfgs/tst_lbfgs.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/scitbx/lbfgs/tst_lbfgs.cpp g++ -o scitbx/fftpack/timing/test0 -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/fftpack/timing/test0.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system -lomptbx -lm g++ -o scitbx/lbfgs/tst_lbfgs -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgs/tst_lbfgs.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lm g++ -o scitbx/lbfgsb/dev/driver1.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/scitbx/lbfgsb/dev/driver1.cpp g++ -o scitbx/lbfgsb/dev/driver2.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/scitbx/lbfgsb/dev/driver2.cpp In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/lbfgsb/raw.h:6, from /<>/scitbx/lbfgsb/dev/driver1.cpp:1: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9, from /usr/include/boost/smart_ptr/scoped_array.hpp:13, from /usr/include/boost/scoped_array.hpp:13, from /<>/scitbx/array_family/ref.h:10: /usr/include/boost/timer.hpp: At global scope: /usr/include/boost/timer.hpp:25:1: note: ‘#pragma message: This header is deprecated. Use the facilities in instead.’ 25 | BOOST_HEADER_DEPRECATED( "the facilities in " ) | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/scitbx/error.h:16, from /<>/scitbx/serialization/base_256.h:2, from /<>/scitbx/math/floating_point_epsilon.h:4, from /<>/scitbx/lbfgsb/raw.h:5: /<>/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::mainlb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’: /<>/scitbx/lbfgsb/raw.h:4433:11: required from ‘void scitbx::lbfgsb::raw::setulb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ /<>/scitbx/lbfgsb/dev/driver1.cpp:69:11: required from here /<>/scitbx/lbfgsb/raw.h:3671:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3671 | SCITBX_ASSERT(x.size() == n); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3671:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3671 | SCITBX_ASSERT(x.size() == n); | ^~~~~~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3672:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3672 | SCITBX_ASSERT(l.size() == n); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3672:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3672 | SCITBX_ASSERT(l.size() == n); | ^~~~~~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3673:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3673 | SCITBX_ASSERT(u.size() == n); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3673:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3673 | SCITBX_ASSERT(u.size() == n); | ^~~~~~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3674:30: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3674 | SCITBX_ASSERT(nbd.size() == n); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3674:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3674 | SCITBX_ASSERT(nbd.size() == n); | ^~~~~~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3675:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3675 | SCITBX_ASSERT(g.size() == n); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3675:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3675 | SCITBX_ASSERT(g.size() == n); | ^~~~~~~~~~~~~ /<>/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::write_ref1(const std::string&, const ref1&, const char*) [with ElementType = double; std::string = std::__cxx11::basic_string]’: /<>/scitbx/lbfgsb/raw.h:974:19: required from ‘void scitbx::lbfgsb::raw::prn3lb(const int&, const ref1&, const FloatType&, const std::string&, const int&, const int&, const int&, const int&, const int&, const int&, const int&, const int&, const FloatType&, const FloatType&, const int&, const std::string&, const int&, const FloatType&, const FloatType&, const int&, const FloatType&, const FloatType&, const FloatType&) [with FloatType = double; std::string = std::__cxx11::basic_string]’ /<>/scitbx/lbfgsb/raw.h:3786:15: required from ‘void scitbx::lbfgsb::raw::mainlb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ /<>/scitbx/lbfgsb/raw.h:4433:11: required from ‘void scitbx::lbfgsb::raw::setulb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ /<>/scitbx/lbfgsb/dev/driver1.cpp:69:11: required from here /<>/scitbx/lbfgsb/raw.h:184:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 184 | for(int i=1;i<=a.size();i++) { | ~^~~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:188:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 188 | for(int j=0;j>/scitbx/array_family/ref.h:8, from /<>/scitbx/lbfgsb/raw.h:6, from /<>/scitbx/lbfgsb/dev/driver2.cpp:1: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9, from /usr/include/boost/smart_ptr/scoped_array.hpp:13, from /usr/include/boost/scoped_array.hpp:13, from /<>/scitbx/array_family/ref.h:10: /usr/include/boost/timer.hpp: At global scope: /usr/include/boost/timer.hpp:25:1: note: ‘#pragma message: This header is deprecated. Use the facilities in instead.’ 25 | BOOST_HEADER_DEPRECATED( "the facilities in " ) | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::write_ref1(const std::string&, const ref1&, const char*) [with ElementType = double; std::string = std::__cxx11::basic_string]’: /<>/scitbx/lbfgsb/dev/driver2.cpp:102:19: required from here /<>/scitbx/lbfgsb/raw.h:184:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 184 | for(int i=1;i<=a.size();i++) { | ~^~~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:188:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 188 | for(int j=0;j>/scitbx/error.h:16, from /<>/scitbx/serialization/base_256.h:2, from /<>/scitbx/math/floating_point_epsilon.h:4, from /<>/scitbx/lbfgsb/raw.h:5: /<>/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::mainlb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’: /<>/scitbx/lbfgsb/raw.h:4433:11: required from ‘void scitbx::lbfgsb::raw::setulb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ /<>/scitbx/lbfgsb/dev/driver2.cpp:70:11: required from here /<>/scitbx/lbfgsb/raw.h:3671:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3671 | SCITBX_ASSERT(x.size() == n); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3671:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3671 | SCITBX_ASSERT(x.size() == n); | ^~~~~~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3672:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3672 | SCITBX_ASSERT(l.size() == n); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3672:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3672 | SCITBX_ASSERT(l.size() == n); | ^~~~~~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3673:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3673 | SCITBX_ASSERT(u.size() == n); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3673:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3673 | SCITBX_ASSERT(u.size() == n); | ^~~~~~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3674:30: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3674 | SCITBX_ASSERT(nbd.size() == n); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3674:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3674 | SCITBX_ASSERT(nbd.size() == n); | ^~~~~~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3675:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3675 | SCITBX_ASSERT(g.size() == n); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3675:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3675 | SCITBX_ASSERT(g.size() == n); | ^~~~~~~~~~~~~ g++ -o scitbx/lbfgsb/dev/driver3.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include /<>/scitbx/lbfgsb/dev/driver3.cpp g++ -o scitbx/array_family/tst_af_4 -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_4.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lm In file included from /<>/scitbx/array_family/ref.h:8, from /<>/scitbx/lbfgsb/raw.h:6, from /<>/scitbx/lbfgsb/dev/driver3.cpp:1: /<>/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9, from /usr/include/boost/smart_ptr/scoped_array.hpp:13, from /usr/include/boost/scoped_array.hpp:13, from /<>/scitbx/array_family/ref.h:10: /usr/include/boost/timer.hpp: At global scope: /usr/include/boost/timer.hpp:25:1: note: ‘#pragma message: This header is deprecated. Use the facilities in instead.’ 25 | BOOST_HEADER_DEPRECATED( "the facilities in " ) | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /<>/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /<>/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /<>/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::write_ref1(const std::string&, const ref1&, const char*) [with ElementType = double; std::string = std::__cxx11::basic_string]’: /<>/scitbx/lbfgsb/dev/driver3.cpp:82:19: required from here /<>/scitbx/lbfgsb/raw.h:184:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 184 | for(int i=1;i<=a.size();i++) { | ~^~~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:188:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 188 | for(int j=0;j>/scitbx/error.h:16, from /<>/scitbx/serialization/base_256.h:2, from /<>/scitbx/math/floating_point_epsilon.h:4, from /<>/scitbx/lbfgsb/raw.h:5: /<>/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::mainlb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’: /<>/scitbx/lbfgsb/raw.h:4433:11: required from ‘void scitbx::lbfgsb::raw::setulb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ /<>/scitbx/lbfgsb/dev/driver3.cpp:72:11: required from here /<>/scitbx/lbfgsb/raw.h:3671:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3671 | SCITBX_ASSERT(x.size() == n); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3671:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3671 | SCITBX_ASSERT(x.size() == n); | ^~~~~~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3672:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3672 | SCITBX_ASSERT(l.size() == n); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3672:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3672 | SCITBX_ASSERT(l.size() == n); | ^~~~~~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3673:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3673 | SCITBX_ASSERT(u.size() == n); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3673:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3673 | SCITBX_ASSERT(u.size() == n); | ^~~~~~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3674:30: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3674 | SCITBX_ASSERT(nbd.size() == n); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3674:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3674 | SCITBX_ASSERT(nbd.size() == n); | ^~~~~~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3675:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3675 | SCITBX_ASSERT(g.size() == n); /<>/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /<>/scitbx/lbfgsb/raw.h:3675:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3675 | SCITBX_ASSERT(g.size() == n); | ^~~~~~~~~~~~~ g++ -o scitbx/lbfgsb/dev/driver1 -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgsb/dev/driver1.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lm g++ -o scitbx/lbfgsb/dev/driver2 -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgsb/dev/driver2.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lm g++ -o scitbx/lbfgsb/dev/driver3 -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgsb/dev/driver3.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lm g++ -o scitbx/math/tests/tst.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -Iscitbx/math/tests -I/<>/scitbx/math/tests /<>/scitbx/math/tests/tst.cpp g++ -o scitbx/matrix/tests/tst_cholesky.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -Iscitbx/matrix/tests -I/<>/scitbx/matrix/tests /<>/scitbx/matrix/tests/tst_cholesky.cpp g++ -o scitbx/matrix/tests/tst_givens.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -Iscitbx/matrix/tests -I/<>/scitbx/matrix/tests /<>/scitbx/matrix/tests/tst_givens.cpp g++ -o scitbx/matrix/tests/tst_householder.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -Iscitbx/matrix/tests -I/<>/scitbx/matrix/tests /<>/scitbx/matrix/tests/tst_householder.cpp g++ -o scitbx/math/tests/tst -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/math/tests/tst.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system g++ -o scitbx/matrix/tests/tst_givens -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/matrix/tests/tst_givens.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system g++ -o scitbx/matrix/tests/tst_svd.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -Iscitbx/matrix/tests -I/<>/scitbx/matrix/tests /<>/scitbx/matrix/tests/tst_svd.cpp g++ -o scitbx/serialization/tst_base_256.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -Iscitbx/serialization -I/<>/scitbx/serialization /<>/scitbx/serialization/tst_base_256.cpp g++ -o scitbx/serialization/tst_base_256 -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/serialization/tst_base_256.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lm g++ -o scitbx/sparse/tests/tst_sparse.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -Iscitbx/sparse/tests -I/<>/scitbx/sparse/tests /<>/scitbx/sparse/tests/tst_sparse.cpp g++ -o scitbx/matrix/tests/tst_cholesky -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/matrix/tests/tst_cholesky.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system g++ -o scitbx/matrix/tests/tst_householder -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/matrix/tests/tst_householder.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system g++ -o scitbx/matrix/tests/tst_svd -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/matrix/tests/tst_svd.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system g++ -o smtbx/refinement/constraints/tests/tst_geometrical_hydrogens.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -Ismtbx/refinement/constraints -I/<>/smtbx/refinement/constraints /<>/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens.cpp g++ -o smtbx/refinement/constraints/tests/tst_reparametrisation.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -Ismtbx/refinement/constraints -I/<>/smtbx/refinement/constraints /<>/smtbx/refinement/constraints/tests/tst_reparametrisation.cpp g++ -o smtbx/refinement/constraints/tests/tst_special_position.o -c -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/cctbx-2023.12+ds2+~3.17.0+ds1-4build2 -Wdate-time -D_FORTIFY_SOURCE=3 -I/<> -I/<>/.pybuild/cpython3_3.12/build_/include -I/<> -I/usr/include -Ismtbx/refinement/constraints -I/<>/smtbx/refinement/constraints /<>/smtbx/refinement/constraints/tests/tst_special_position.cpp g++ -o scitbx/sparse/tests/tst_sparse -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/sparse/tests/tst_sparse.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lboost_thread -lboost_system g++ -o smtbx/refinement/constraints/tests/tst_geometrical_hydrogens -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread smtbx/refinement/constraints/tests/tst_geometrical_hydrogens.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lsmtbx_refinement_constraints -lboost_thread -lboost_system g++ -o smtbx/refinement/constraints/tests/tst_special_position -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread smtbx/refinement/constraints/tests/tst_special_position.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lsmtbx_refinement_constraints -lboost_thread -lboost_system g++ -o smtbx/refinement/constraints/tests/tst_reparametrisation -rdynamic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -L/usr/lib/s390x-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread smtbx/refinement/constraints/tests/tst_reparametrisation.o -L/usr/lib -L/usr/lib64 -L/usr/lib/s390x-linux-gnu -Llib -L/<>/lib -Llib -L/<>/lib -lcctbx -lsmtbx_refinement_constraints -lboost_thread -lboost_system scons: done building targets. usr+sys time: 42.11 seconds wall clock time: 32 minutes 41.35 seconds (1961.35 seconds total) iconv -f ISO-8859-1 -t UTF-8 cctbx/eltbx/covalent_radii.h > covalent_radii.h mv covalent_radii.h cctbx/eltbx/covalent_radii.h # cp all extensions into the python build directory # special case for an extension used during test dh_auto_build -- -s custom --build-args="cp -f {build_dir}_/lib/*_ext.so {build_dir}_/scitbx/array_family/boost_python/regression_test_ext.so {build_dir}" pybuild --build -i python{version} -p 3.12 -s custom "--build-args=cp -f {build_dir}_/lib/*_ext.so {build_dir}_/scitbx/array_family/boost_python/regression_test_ext.so {build_dir}" I: pybuild base:305: cp -f '/<>/.pybuild/cpython3_3.12/build'_/lib/*_ext.so '/<>/.pybuild/cpython3_3.12/build'_/scitbx/array_family/boost_python/regression_test_ext.so '/<>/.pybuild/cpython3_3.12/build' # cp the dxtbx pybind11 extension at the right place. dh_auto_build -- -s custom --build-args="cp -f {build_dir}_/lib/dxtbx_flumpy.so {build_dir}" pybuild --build -i python{version} -p 3.12 -s custom "--build-args=cp -f {build_dir}_/lib/dxtbx_flumpy.so {build_dir}" I: pybuild base:305: cp -f '/<>/.pybuild/cpython3_3.12/build'_/lib/dxtbx_flumpy.so '/<>/.pybuild/cpython3_3.12/build' make[1]: Leaving directory '/<>' rm -f debian/libcctbx-dev.debhelper.log debian/libcctbx0.debhelper.log debian/python3-cctbx.debhelper.log debian/rules override_dh_auto_test make[1]: Entering directory '/<>' # DOES NOT WORK, source code must be modified in order to find the expected # /usr/share/cctbx libtbx_env file during the build process make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_testroot -a -O--buildsystem=pybuild dh_prep -a -O--buildsystem=pybuild rm -f -- debian/libcctbx0.substvars debian/libcctbx-dev.substvars debian/python3-cctbx.substvars rm -fr -- debian/.debhelper/generated/libcctbx0/ debian/libcctbx0/ debian/tmp/ debian/.debhelper/generated/libcctbx-dev/ debian/libcctbx-dev/ debian/.debhelper/generated/python3-cctbx/ debian/python3-cctbx/ debian/rules override_dh_auto_install make[1]: Entering directory '/<>' # install the cctbx python modules dh_auto_install install -m0755 -d /<>/cctbx-2023.12\+ds2\+\~3.17.0\+ds1/debian/tmp pybuild --install -i python{version} -p 3.12 --dest-dir /<>/cctbx-2023.12\+ds2\+\~3.17.0\+ds1/debian/tmp I: pybuild base:305: /usr/bin/python3 setup.py install --root '/<>/debian/tmp' running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running install_lib creating /<>/debian/tmp/usr creating /<>/debian/tmp/usr/lib creating /<>/debian/tmp/usr/lib/python3.12 creating /<>/debian/tmp/usr/lib/python3.12/dist-packages creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/structure_factors creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/structure_factors/direct copying /<>/.pybuild/cpython3_3.12/build/smtbx/structure_factors/direct/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/structure_factors/direct copying /<>/.pybuild/cpython3_3.12/build/smtbx/structure_factors/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/structure_factors creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/stl copying /<>/.pybuild/cpython3_3.12/build/smtbx/stl/map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/stl copying /<>/.pybuild/cpython3_3.12/build/smtbx/stl/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/stl copying /<>/.pybuild/cpython3_3.12/build/smtbx/conftest.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests copying /<>/.pybuild/cpython3_3.12/build/smtbx/ab_initio/tests/tst_ab_initio_ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests copying /<>/.pybuild/cpython3_3.12/build/smtbx/ab_initio/tests/tst_charge_flipping.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests copying /<>/.pybuild/cpython3_3.12/build/smtbx/ab_initio/tests/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests copying /<>/.pybuild/cpython3_3.12/build/smtbx/ab_initio/charge_flipping.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio copying /<>/.pybuild/cpython3_3.12/build/smtbx/ab_initio/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio copying /<>/.pybuild/cpython3_3.12/build/smtbx/run_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression copying /<>/.pybuild/cpython3_3.12/build/smtbx/regression/tst_commandline_refine.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression copying /<>/.pybuild/cpython3_3.12/build/smtbx/regression/tst_commandline_anomrefine.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression copying /<>/.pybuild/cpython3_3.12/build/smtbx/regression/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression/test_data copying /<>/.pybuild/cpython3_3.12/build/smtbx/regression/test_data/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression/test_data creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/absolute_structure copying /<>/.pybuild/cpython3_3.12/build/smtbx/absolute_structure/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/absolute_structure copying /<>/.pybuild/cpython3_3.12/build/smtbx/development.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx copying /<>/.pybuild/cpython3_3.12/build/smtbx/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/source_generators copying /<>/.pybuild/cpython3_3.12/build/smtbx/source_generators/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/source_generators copying /<>/.pybuild/cpython3_3.12/build/smtbx/source_generators/flex_fwd_h.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/source_generators creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/least_squares.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/geometrical/all.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/geometrical/hydrogens.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/geometrical/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/rigid.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/all.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/tst_reparametrisation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/test_same_group.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/tst_lbfgs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/test_rigid.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/test_occupancies.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/tst_constrained_structure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/test_disorder.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/test_direction.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/site.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/adp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/fpfdp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/occupancy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/weighting_schemes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/restraints/origin_fixing_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/restraints/adp_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/restraints/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/array_family copying /<>/.pybuild/cpython3_3.12/build/smtbx/array_family/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/array_family creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/masks copying /<>/.pybuild/cpython3_3.12/build/smtbx/masks/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/masks creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/smtbx/command_line/refine.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/smtbx/command_line/absolute_structure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/smtbx/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/smtbx/command_line/masks.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/smtbx/command_line/benchmark_refinement.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/smtbx/command_line/anom_refine.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/smtbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx copying /<>/.pybuild/cpython3_3.12/build/smtbx/libtbx_refresh.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx_mosaic_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/rstbx_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_crystal_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_stl_set_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/smtbx_stl_map_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_suffixtree_shared_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/iotbx_scalepack_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/rstbx_symmetry_constraints_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_geometry_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/rstbx_array_family_flex_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/rstbx_bandpass_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/preset_buttons.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/webbrowser_messenger_py3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/HKLviewer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/cmdlineframes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/jsview_3d.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/default_user_preset_buttons.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/helpers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/xtriage_runner.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/xtricorder_runner.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/webbrowser_messenger_py2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/qt.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/hklview_frame.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/qt_chromium_check.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/display2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/hklviewer_gui.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/chimeraX_wheel_src copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/chimeraX_wheel_src/tool.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/chimeraX_wheel_src copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/chimeraX_wheel_src/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/chimeraX_wheel_src creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /<>/.pybuild/cpython3_3.12/build/crys3d/regression/tst_websocket.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /<>/.pybuild/cpython3_3.12/build/crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /<>/.pybuild/cpython3_3.12/build/crys3d/regression/tests_HKLviewer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /<>/.pybuild/cpython3_3.12/build/crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /<>/.pybuild/cpython3_3.12/build/crys3d/regression/tst_hklinfo.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /<>/.pybuild/cpython3_3.12/build/crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /<>/.pybuild/cpython3_3.12/build/crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /<>/.pybuild/cpython3_3.12/build/crys3d/regression/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/programs copying /<>/.pybuild/cpython3_3.12/build/crys3d/programs/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/programs copying /<>/.pybuild/cpython3_3.12/build/crys3d/programs/HKLinfo.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/programs creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklview/view_3d.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklview/view_2d.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklview/comparison.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklview/frames.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklview/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /<>/.pybuild/cpython3_3.12/build/crys3d/command_line/hklview.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /<>/.pybuild/cpython3_3.12/build/crys3d/command_line/HKLviewer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /<>/.pybuild/cpython3_3.12/build/crys3d/command_line/model_viewer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /<>/.pybuild/cpython3_3.12/build/crys3d/command_line/visualize_r_factors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /<>/.pybuild/cpython3_3.12/build/crys3d/command_line/make_install_HKLviewer_ChimeraX.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /<>/.pybuild/cpython3_3.12/build/crys3d/command_line/multiplicity_viewer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /<>/.pybuild/cpython3_3.12/build/crys3d/command_line/qttbx.view_structure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /<>/.pybuild/cpython3_3.12/build/crys3d/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /<>/.pybuild/cpython3_3.12/build/crys3d/command_line/compare_datasets.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /<>/.pybuild/cpython3_3.12/build/crys3d/command_line/HKLinfo.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx copying /<>/.pybuild/cpython3_3.12/build/crys3d/qttbx/xray_structure_viewer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx copying /<>/.pybuild/cpython3_3.12/build/crys3d/qttbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx copying /<>/.pybuild/cpython3_3.12/build/crys3d/qttbx/map_viewer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx copying /<>/.pybuild/cpython3_3.12/build/cctbx_xray_observations_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/spotfinder_array_family_flex_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_probe_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_ramachandran_restraints_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_eltbx_neutron_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/run_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_18_doc_programming_tips_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_py_from_html.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_10_doc_programming_tips_1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_19_doc_programming_tips_3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_13_script_ideal_ss.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_14_script_lbfgs_no_curvature.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_2_doc_hlo_intro.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_12_script_compare_ss.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_16_script_lbfgs_with_curvature.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_4_doc_hlo_data_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_1_template.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_5_doc_hlo_map_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_3_doc_hlo_model_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_8_doc_maps_intro.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_11_script_1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/exercise.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_17_script_rfactors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_15_doc_models_hierarchy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_7_doc_low_flex_advanced.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_9_doc_maps_boxing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/command_line/extract_script_from_html_cctbx_doc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/libtbx_refresh.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website copying /<>/.pybuild/cpython3_3.12/build/dxtbx_format_image_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_translation_search_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx copying /<>/.pybuild/cpython3_3.12/build/cbflib_adaptbx/copy_files.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx copying /<>/.pybuild/cpython3_3.12/build/cbflib_adaptbx/run_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cbflib_adaptbx/command_line/dump.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cbflib_adaptbx/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cbflib_adaptbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx copying /<>/.pybuild/cpython3_3.12/build/cbflib_adaptbx/exercise_compression.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/fast_linalg copying /<>/.pybuild/cpython3_3.12/build/fast_linalg/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fast_linalg copying /<>/.pybuild/cpython3_3.12/build/mmtbx_validation_ramachandran_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_wigner_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_geometry_indexing_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/std_pair_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_sparse_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_math_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_masks_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell copying /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/small_cell.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell copying /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/powder_util.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/small_cell_index.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/xfel_small_cell_process.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/cake_plot.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/cake_plot_prep.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/candidate_cells.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/small_cell_process.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/powder_from_spots.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/solve_orientation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell copying /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell copying /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/write_orientation_arrows.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation copying /<>/.pybuild/cpython3_3.12/build/xfel/mono_simulation/mono_treatment.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation copying /<>/.pybuild/cpython3_3.12/build/xfel/mono_simulation/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation copying /<>/.pybuild/cpython3_3.12/build/xfel/mono_simulation/max_like_pos_neg.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_calib.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/pnccd_tbx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/fxs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/pnccd_hit.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_index.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_mask.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_c2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_bg.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_launch.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/amo/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/phil_patch.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/components/run_stats_plotter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/components/xfel_gui_plotter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/components/spotfinder_plotter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/components/submission_tracker.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/components/spotfinder_scraper.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/components/xfel_gui_controls.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/components/timeit.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/components/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/components/xfel_gui_init.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/components/xfel_gui_dialogs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/components/tooltips.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_run_stats_in_gui.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line/ui_server.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_reflection_stats.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_run_stats.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_run_stats_from_experiments.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_isoform_cloud.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line/print_run_stats.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_uc_cloud.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_uc_cloud_from_experiments.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line/xfel_gui_launch.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line/get_hit_timestamps.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_spotfinder_stats_in_gui.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/experiment.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/trial.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/tag.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/frame_logging.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/run.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/job.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/merging_log_scraper.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/task.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/dxtbx_db.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/dataset.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/rungroup.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/cfgs copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/cfgs/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/cfgs copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/cfgs/shifter_templates.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/cfgs copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/stats.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/xfel_db.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector copying /<>/.pybuild/cpython3_3.12/build/xfel/cftbx/detector/metrology2phil.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector copying /<>/.pybuild/cpython3_3.12/build/xfel/cftbx/detector/cspad_cbf_tbx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector copying /<>/.pybuild/cpython3_3.12/build/xfel/cftbx/detector/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector copying /<>/.pybuild/cpython3_3.12/build/xfel/cftbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/correction_vector_plot.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cxi_cc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/postrefinement_factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/integrate_image_api.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_hdf5.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_ledge.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_dump.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_daq_status.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/average_tbx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/common_mode.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_average.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/parse_calib.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/pixel_histograms.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_illumination_filter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/histogram_finalise.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_radial_average.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_view.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/display_calib.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_event_code.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/xes_histograms.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_event_info.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_filter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_xes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/xes_finalise.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_image_dict.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_hitfind.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_spectrum_filter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/hitfinder_tbx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/cspad_tbx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/xes_faster_histograms.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_dump_bitmap.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_param.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/rayonix_tbx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_mar.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_pulnix_dump.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/completeness_plot.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/clustering/test_cluster.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/clustering/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/clustering/Cluster.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/clustering/SingleFrame.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/trumpet_plot.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/spectra_filter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/display_powder_arcs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/util.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/gfx/status_plot.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/gfx/wx_detectors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/gfx/trials_plot.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/gfx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/display_spots.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/strong_zulu.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/postrefinement_legacy_rs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/command_line/einsle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/data_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/merging_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/average_spots.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/postrefinement_hybrid_rs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/postrefinement_updated_rs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /<>/.pybuild/cpython3_3.12/build/xfel/util/split_detector.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /<>/.pybuild/cpython3_3.12/build/xfel/util/image_pickle_locator.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /<>/.pybuild/cpython3_3.12/build/xfel/util/mp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /<>/.pybuild/cpython3_3.12/build/xfel/util/dials_pickle_reader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /<>/.pybuild/cpython3_3.12/build/xfel/util/weather.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /<>/.pybuild/cpython3_3.12/build/xfel/util/cctbx_xfel_installer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /<>/.pybuild/cpython3_3.12/build/xfel/util/drift.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /<>/.pybuild/cpython3_3.12/build/xfel/util/dials_file_matcher.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /<>/.pybuild/cpython3_3.12/build/xfel/util/show_spot_separation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /<>/.pybuild/cpython3_3.12/build/xfel/util/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /<>/.pybuild/cpython3_3.12/build/xfel/util/kapton_2019_correction_frame_frame_plugin.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /<>/.pybuild/cpython3_3.12/build/xfel/util/reflection_length.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel copying /<>/.pybuild/cpython3_3.12/build/xfel/euxfel/agipd_cxigeom2nexus.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel copying /<>/.pybuild/cpython3_3.12/build/xfel/euxfel/agipd_from_defs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel copying /<>/.pybuild/cpython3_3.12/build/xfel/euxfel/write_composite_image.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel copying /<>/.pybuild/cpython3_3.12/build/xfel/euxfel/read_geom.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel copying /<>/.pybuild/cpython3_3.12/build/xfel/euxfel/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering copying /<>/.pybuild/cpython3_3.12/build/xfel/clustering/simulate_partial_data.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering copying /<>/.pybuild/cpython3_3.12/build/xfel/clustering/cluster_groups.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering copying /<>/.pybuild/cpython3_3.12/build/xfel/clustering/api.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/cluster_unit_cell.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/cluster_intensity_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/cluster_per_frame_wilson.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/cluster_42.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/cluster_visualise_orientations.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/clustering/cluster.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering copying /<>/.pybuild/cpython3_3.12/build/xfel/clustering/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering copying /<>/.pybuild/cpython3_3.12/build/xfel/clustering/singleframe.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc copying /<>/.pybuild/cpython3_3.12/build/xfel/graph_proc/components.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc copying /<>/.pybuild/cpython3_3.12/build/xfel/graph_proc/parameter_optimizer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc copying /<>/.pybuild/cpython3_3.12/build/xfel/graph_proc/multiproc_temp_parame_opt.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc copying /<>/.pybuild/cpython3_3.12/build/xfel/graph_proc/graph.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc copying /<>/.pybuild/cpython3_3.12/build/xfel/graph_proc/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/pal copying /<>/.pybuild/cpython3_3.12/build/xfel/pal/jf4m_geom2nexus.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/pal copying /<>/.pybuild/cpython3_3.12/build/xfel/pal/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/pal creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos copying /<>/.pybuild/cpython3_3.12/build/xfel/vonHamos/fit_3_gaussian.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos copying /<>/.pybuild/cpython3_3.12/build/xfel/vonHamos/test_3_gaussian.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos copying /<>/.pybuild/cpython3_3.12/build/xfel/vonHamos/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api copying /<>/.pybuild/cpython3_3.12/build/xfel/lcls_api/exercise_api.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api copying /<>/.pybuild/cpython3_3.12/build/xfel/lcls_api/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api copying /<>/.pybuild/cpython3_3.12/build/xfel/lcls_api/psana_cctbx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/refine.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/absorption.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/integrate/factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/integrate/integrate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/integrate/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/input/file_lister.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/input/file_loader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/input/file_load_calculator.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/input/factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/input/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/output copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/output/factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/output copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/output/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/output creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/scale/experiment_scaler.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/scale/factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/scale/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/worker.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/tdata/cell_listing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/tdata/factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/tdata/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/reflection_table_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/filter/factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/filter/reflection_filter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/filter/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/filter/experiment_filter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/utils/memory_usage.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/utils/data_counter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/utils/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/model/factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/model/crystal_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/model/resolution_binner.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/model/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/validation copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/validation/application.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/validation copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/validation/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/validation creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/group/group_reflections.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/group/factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/group/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/phil copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/phil/phil.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/phil copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/phil/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/phil creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine/postrefinement_rs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine/factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine/postrefinement_rs2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/lunus/lunus.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/lunus/factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/lunus/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/merge/merger.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/merge/factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/merge/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/mpi_helper.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/error_modifier_sr.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/error_modifier_ha14.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/error_modifier_ev11.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/mpi_logger.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/compare_results.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/cosym_tranch_align.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/reindex_cosym.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/token_passing_left_right.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/reindex_to_abc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/cosym.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/df_cosym.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/reindex_to_reference.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/polarization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/aux_cosym.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/balance/factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/balance/load_balancer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/balance/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/intensity_resolution_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/intensity_histogram.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/experiment_resolution_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/beam_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/unit_cell_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/phil_validation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/database/merging_database.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/database/merging_database_flex.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/database/merging_database_fs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/database/merging_database_sqlite3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/database/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/general_fcalc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/model copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/model/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/model creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/postrefine copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/postrefine/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/postrefine creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/error_modeler_base.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/sdfac_propagate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/errors_from_residuals.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/sdfac_refine.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/sdfac_refine_levmar.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/sdfac_refine_lbfgs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/reduced_chi_squared.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/sdfac_propagate_and_refine.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/statistics copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/statistics/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/statistics copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/predictions_to_edges.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/graphs copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/report/graphs/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/graphs creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/tables copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/report/tables/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/tables copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/report/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/command_line/merge.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/command_line/mpi_integrate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /<>/.pybuild/cpython3_3.12/build/xfel/xpp/simulate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /<>/.pybuild/cpython3_3.12/build/xfel/xpp/progress_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /<>/.pybuild/cpython3_3.12/build/xfel/xpp/isoform.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /<>/.pybuild/cpython3_3.12/build/xfel/xpp/split_pickles.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /<>/.pybuild/cpython3_3.12/build/xfel/xpp/progress_support.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /<>/.pybuild/cpython3_3.12/build/xfel/xpp/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_detector_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_pbs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/convert_gain_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_index.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/view_pixel_histograms.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_pickle2cbf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/xpp_progress_detail.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_lsf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/fee_calibration.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/xpp_progress_bar.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/experiment_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/make_mask.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_merge.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/xtc_process.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/trumpet_plots.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/xfel_process.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/find_highres_shots.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/fee_view.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_slaccalib2cbfheader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/mpi_average.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cctbx_integration_pickle_viewer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/convert_gain_map_cbf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/metrology.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_cbfheader2slaccalib.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/xtc_dump.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/riso.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_parameters.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/filter_experiments_by_rmsd.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/quadrants.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/histogram_finalise.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/xpp_isoform.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/smooth_spectrum.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/print_pickle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/or_mask.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_display_metrology.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_stream_to_pickle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/stills_merge.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_psana.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_circular_gain_mask.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/frame_extractor.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/xes_histograms.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/weather.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/get_next_trial_id.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/xpp_simulate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/plot_to_subpixel.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/drift.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cbf_average.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/calc_gain_ratio.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/striping.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/launch_fxs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/FEE_average_plot.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/xes_finalise.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_cspad_pinwheel.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/experiment_residuals.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_xmerge.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/detector_residuals.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/show_spot_separation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/h5_average.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/overlay_spectra.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/runs_sentinel.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/experiment_json_to_cbf_def.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_generate_circular_gain_mask.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_detector_congruence.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_cbf_metrology.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/brehm_diederichs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_detector_format_versions.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/upload_mtz.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_xtc_process.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/trial_stats.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/monitor_trials.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/jungfrau_metrics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/subtract_background.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/frame_unpickler.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/beamcenter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/list_db_metadata.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_plotcv.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/monitor_detectors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_spots.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_mpi_submit.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_detector_congruence2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/make_mar_mask.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/jobs_sentinel.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_apply_metrology.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_detector_shifts.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_view.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_optical2cbfheader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_diff.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/make_dials_mask.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/recompute_mosaicity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/auto_submit.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/radial_average.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/quadrants_cbf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/postrefine.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_calibdir2cbfheader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_pyana.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel copying /<>/.pybuild/cpython3_3.12/build/xfel/swissfel/sync_jf16m_geometry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel copying /<>/.pybuild/cpython3_3.12/build/xfel/swissfel/jf16m_cxigeom2nexus.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel copying /<>/.pybuild/cpython3_3.12/build/xfel/swissfel/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /<>/.pybuild/cpython3_3.12/build/xfel/metrology/mark1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /<>/.pybuild/cpython3_3.12/build/xfel/metrology/mark0.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /<>/.pybuild/cpython3_3.12/build/xfel/metrology/flatfile.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /<>/.pybuild/cpython3_3.12/build/xfel/metrology/mark3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /<>/.pybuild/cpython3_3.12/build/xfel/metrology/quadrant.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /<>/.pybuild/cpython3_3.12/build/xfel/metrology/mark10.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/legacy_scale copying /<>/.pybuild/cpython3_3.12/build/xfel/metrology/legacy_scale/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/legacy_scale copying /<>/.pybuild/cpython3_3.12/build/xfel/metrology/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /<>/.pybuild/cpython3_3.12/build/xfel/metrology/panel_fitting.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /<>/.pybuild/cpython3_3.12/build/dxtbx_format_nexus_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /<>/.pybuild/cpython3_3.12/build/fable/tst_cout.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /<>/.pybuild/cpython3_3.12/build/fable/tst_cout_compile.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /<>/.pybuild/cpython3_3.12/build/fable/run_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /<>/.pybuild/cpython3_3.12/build/fable/simple_compilation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /<>/.pybuild/cpython3_3.12/build/fable/tst_equivalence.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /<>/.pybuild/cpython3_3.12/build/fable/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /<>/.pybuild/cpython3_3.12/build/fable/tst_ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /<>/.pybuild/cpython3_3.12/build/fable/cout.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /<>/.pybuild/cpython3_3.12/build/fable/tokenization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /<>/.pybuild/cpython3_3.12/build/fable/command_line/show_calls.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /<>/.pybuild/cpython3_3.12/build/fable/command_line/insert_write_at_start_of_each_procedure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /<>/.pybuild/cpython3_3.12/build/fable/command_line/cout.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /<>/.pybuild/cpython3_3.12/build/fable/command_line/split.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /<>/.pybuild/cpython3_3.12/build/fable/command_line/read.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /<>/.pybuild/cpython3_3.12/build/fable/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /<>/.pybuild/cpython3_3.12/build/fable/command_line/fem_include_search_paths.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /<>/.pybuild/cpython3_3.12/build/fable/tst_read.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /<>/.pybuild/cpython3_3.12/build/fable/intrinsics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /<>/.pybuild/cpython3_3.12/build/fable/read.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /<>/.pybuild/cpython3_3.12/build/fable/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /<>/.pybuild/cpython3_3.12/build/fable/equivalence.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /<>/.pybuild/cpython3_3.12/build/mmtbx_dynamics_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/regular_grid_on_unit_sphere.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /<>/.pybuild/cpython3_3.12/build/scitbx/stl/map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /<>/.pybuild/cpython3_3.12/build/scitbx/stl/tst_set.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /<>/.pybuild/cpython3_3.12/build/scitbx/stl/tst_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /<>/.pybuild/cpython3_3.12/build/scitbx/stl/vector.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /<>/.pybuild/cpython3_3.12/build/scitbx/stl/tst_vector.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /<>/.pybuild/cpython3_3.12/build/scitbx/stl/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /<>/.pybuild/cpython3_3.12/build/scitbx/stl/set.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/lstbx/tests/tst_normal_equations.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/lstbx/tests/test_problems.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/lstbx/tests/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/lstbx/normal_eqns_solving.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/lstbx/normal_eqns.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/lstbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/glmtbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/glmtbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/glmtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/matrix copying /<>/.pybuild/cpython3_3.12/build/scitbx/matrix/row_echelon.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/matrix copying /<>/.pybuild/cpython3_3.12/build/scitbx/matrix/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/matrix creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /<>/.pybuild/cpython3_3.12/build/scitbx/examples/lbfgs_recipe.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /<>/.pybuild/cpython3_3.12/build/scitbx/examples/rigid_body_refinement_core.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /<>/.pybuild/cpython3_3.12/build/scitbx/examples/chebyshev_lsq_example.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /<>/.pybuild/cpython3_3.12/build/scitbx/examples/integrating_a_weighted_sinc_function.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /<>/.pybuild/cpython3_3.12/build/scitbx/examples/functions.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /<>/.pybuild/cpython3_3.12/build/scitbx/examples/principal_axes_of_inertia.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /<>/.pybuild/cpython3_3.12/build/scitbx/examples/immoptibox_ports.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /<>/.pybuild/cpython3_3.12/build/scitbx/examples/minimizer_comparisons.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/bevington copying /<>/.pybuild/cpython3_3.12/build/scitbx/examples/bevington/silver.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/bevington copying /<>/.pybuild/cpython3_3.12/build/scitbx/examples/bevington/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/bevington copying /<>/.pybuild/cpython3_3.12/build/scitbx/examples/lbfgs_linear_least_squares_fit.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /<>/.pybuild/cpython3_3.12/build/scitbx/examples/flex_array_loops.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /<>/.pybuild/cpython3_3.12/build/scitbx/examples/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /<>/.pybuild/cpython3_3.12/build/scitbx/examples/flex_grid.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /<>/.pybuild/cpython3_3.12/build/scitbx/examples/bootstrap.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/sparse copying /<>/.pybuild/cpython3_3.12/build/scitbx/sparse/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/sparse creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_singular.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_joint_lib.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_free_motion_hard.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_molecules.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/free_motion_reference_impl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/wx_free_motion.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_featherstone.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/joint_lib.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/test_simulation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/wx_molecules.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_spherical_refinement.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/wx_joint_lib.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/featherstone.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/test_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_free_motion.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/wx_tardy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/tst_energy_plots.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/tardy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/tst_tardy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/joint_lib.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/body_lib.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/spatial_lib.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/featherstone.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/tst_basic.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/make_bundles.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg copying /<>/.pybuild/cpython3_3.12/build/scitbx/linalg/svd.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg copying /<>/.pybuild/cpython3_3.12/build/scitbx/linalg/ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg copying /<>/.pybuild/cpython3_3.12/build/scitbx/linalg/householder.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg copying /<>/.pybuild/cpython3_3.12/build/scitbx/linalg/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg copying /<>/.pybuild/cpython3_3.12/build/scitbx/linalg/eigensystem.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg copying /<>/.pybuild/cpython3_3.12/build/scitbx/run_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/fftpack.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/lbfgsb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/minimizers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /<>/.pybuild/cpython3_3.12/build/scitbx/graph/test_cases_tardy_pdb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /<>/.pybuild/cpython3_3.12/build/scitbx/graph/tst_tardy_tree.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /<>/.pybuild/cpython3_3.12/build/scitbx/graph/tst_tardy_tree_find_paths.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /<>/.pybuild/cpython3_3.12/build/scitbx/graph/rigidity_matrix_symbolic.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /<>/.pybuild/cpython3_3.12/build/scitbx/graph/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /<>/.pybuild/cpython3_3.12/build/scitbx/graph/rigidity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /<>/.pybuild/cpython3_3.12/build/scitbx/graph/tardy_tree.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /<>/.pybuild/cpython3_3.12/build/scitbx/graph/tst_rigidity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /<>/.pybuild/cpython3_3.12/build/scitbx/graph/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /<>/.pybuild/cpython3_3.12/build/scitbx/graph/tst_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/random copying /<>/.pybuild/cpython3_3.12/build/scitbx/random/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/random copying /<>/.pybuild/cpython3_3.12/build/scitbx/differential_evolution.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/genetic_algorithm_with_mp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators copying /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators copying /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/lbfgs_fem.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_reductions.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_operator_traits_builtin.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/operator_functor_info.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_all.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_algebras.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_operator_functors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_apply.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_std_imports.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators copying /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/flex_fwd_h.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin/refinebase.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin/optional.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin/min_logging.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin/compulsory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin/minimizer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin/bounds.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin/reparams.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin/realsymmetricpseudoinverse.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin/twisted_gaussian.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin/auxiliary.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /<>/.pybuild/cpython3_3.12/build/scitbx/r3_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/cross_entropy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tst_2d_zernike.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tst_multivariate_moments.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/sphere_sphere_intersection.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tst_zernike_mom.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/zernike_align_fft.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/incremental_SO3_sampling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/besselk.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tst_undirected_graph.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/fliege_mayer_900_ylm.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tst_bessel_zeros.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/chebyshev_lsq_fit.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/clustering.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/lefebvre.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/so3_lie_algebra.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/minimum_covering_ellipsoid.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/des_3_100_13.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tst_so3_lie_algebra.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/periodogram.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_r3_rotation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_gaussian.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_curve_fitting.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_resample.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_weighted_correlation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_error_propagation_matrix_inverse.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_fit_peak.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_fit_quadratic_function.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_uniform_rotation_matrix.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_minimum_covering_ellipsoid.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_cubic_equation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_halton.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_math.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_euler_angles.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_periodogram.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_gaussian_fit_1d_analytical.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_tetrahedron.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_exp_functions.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_orthonormal_basis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_g_function.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_bessel.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_quadrature.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_angle_derivative.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_dmatrix.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_similarity_indices.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_superpose.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_clustering.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_line_search.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_gcd.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/spe.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/des_3_240_21.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/euler_angles.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/fliege_mayer_400.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/farey.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/distributions.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/curve_fitting.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/breakpoint.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/fliege_mayer_900.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tst_zernike.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/multiple_superposition.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/sieve_of_eratosthenes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/superpose.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/undirected_graph.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/fit_quadratic_function.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/scale_curves.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/fit_peak.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/cubic_spline.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/gumbel.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/gaussian.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/gaussian_fit.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/boost_python copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/boost_python/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/boost_python creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graphics_utils copying /<>/.pybuild/cpython3_3.12/build/scitbx/graphics_utils/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graphics_utils copying /<>/.pybuild/cpython3_3.12/build/scitbx/graphics_utils/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graphics_utils creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/suffixtree copying /<>/.pybuild/cpython3_3.12/build/scitbx/suffixtree/single.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/suffixtree copying /<>/.pybuild/cpython3_3.12/build/scitbx/suffixtree/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/suffixtree creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family copying /<>/.pybuild/cpython3_3.12/build/scitbx/array_family/shared.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family copying /<>/.pybuild/cpython3_3.12/build/scitbx/array_family/flex.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family copying /<>/.pybuild/cpython3_3.12/build/scitbx/array_family/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /<>/.pybuild/cpython3_3.12/build/scitbx/lbfgs/tst_mpi_split_evaluator.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /<>/.pybuild/cpython3_3.12/build/scitbx/lbfgs/tst_lbfgs_fem.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /<>/.pybuild/cpython3_3.12/build/scitbx/lbfgs/tst_func_free_line_search.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /<>/.pybuild/cpython3_3.12/build/scitbx/lbfgs/tst_curvatures.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /<>/.pybuild/cpython3_3.12/build/scitbx/lbfgs/tst_ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /<>/.pybuild/cpython3_3.12/build/scitbx/lbfgs/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /<>/.pybuild/cpython3_3.12/build/scitbx/golden_section_search.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/direct_search_simulated_annealing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/simplex.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/wigner copying /<>/.pybuild/cpython3_3.12/build/scitbx/wigner/tst_wigner3j.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/wigner copying /<>/.pybuild/cpython3_3.12/build/scitbx/wigner/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/wigner copying /<>/.pybuild/cpython3_3.12/build/scitbx/cubicle_neighbors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/iso_surface copying /<>/.pybuild/cpython3_3.12/build/scitbx/iso_surface/tst_iso_surface.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/iso_surface copying /<>/.pybuild/cpython3_3.12/build/scitbx/iso_surface/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/iso_surface copying /<>/.pybuild/cpython3_3.12/build/scitbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/libtbx_refresh.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/minpack.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils/signal_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils/tst_random_transform.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils/robust_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils/command_line.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils/random_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils/tst_graph.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils/misc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils/dicts.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils/tst_robust.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils/graph_tools.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils/random_transform.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /<>/.pybuild/cpython3_3.12/build/scitbx/smoothing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/boost_python copying /<>/.pybuild/cpython3_3.12/build/scitbx/boost_python/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/boost_python creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stdlib copying /<>/.pybuild/cpython3_3.12/build/scitbx/stdlib/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stdlib copying /<>/.pybuild/cpython3_3.12/build/cctbx_orientation_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/gltbx_viewer_utils_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_tls_decompose_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/gltbx_gl_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/omptbx_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/smtbx_refinement_restraints_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_merging_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/ccp4io_adaptbx_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_eltbx_wavelengths_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_adptbx_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_symmetry_search_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_utility_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_array_family_shared_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/math_support copying /<>/.pybuild/cpython3_3.12/build/spotfinder/math_support/sphere_formulae.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/math_support copying /<>/.pybuild/cpython3_3.12/build/spotfinder/math_support/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/math_support copying /<>/.pybuild/cpython3_3.12/build/spotfinder/run_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /<>/.pybuild/cpython3_3.12/build/spotfinder/servers/adsc_client.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /<>/.pybuild/cpython3_3.12/build/spotfinder/servers/spotfinder_server_read_file.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /<>/.pybuild/cpython3_3.12/build/spotfinder/servers/mp_spotfinder_server_read_file.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /<>/.pybuild/cpython3_3.12/build/spotfinder/servers/pilatus_client.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /<>/.pybuild/cpython3_3.12/build/spotfinder/servers/specific_client_example.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /<>/.pybuild/cpython3_3.12/build/spotfinder/servers/multipart_encoder.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /<>/.pybuild/cpython3_3.12/build/spotfinder/servers/general_client_example.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /<>/.pybuild/cpython3_3.12/build/spotfinder/servers/spotfinder_server_client_push.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /<>/.pybuild/cpython3_3.12/build/spotfinder/servers/bcsb_client_example.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /<>/.pybuild/cpython3_3.12/build/spotfinder/servers/apache_bcsb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /<>/.pybuild/cpython3_3.12/build/spotfinder/servers/apache_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /<>/.pybuild/cpython3_3.12/build/spotfinder/servers/apache.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /<>/.pybuild/cpython3_3.12/build/spotfinder/servers/mp_spotfinder_server_is_alive.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /<>/.pybuild/cpython3_3.12/build/spotfinder/servers/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /<>/.pybuild/cpython3_3.12/build/spotfinder/servers/thin_client.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /<>/.pybuild/cpython3_3.12/build/spotfinder/servers/apache_dials.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/dxtbx_toolbox copying /<>/.pybuild/cpython3_3.12/build/spotfinder/dxtbx_toolbox/practical_heuristics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/dxtbx_toolbox copying /<>/.pybuild/cpython3_3.12/build/spotfinder/dxtbx_toolbox/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/dxtbx_toolbox creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/core_toolbox copying /<>/.pybuild/cpython3_3.12/build/spotfinder/core_toolbox/close_spots_detail.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/core_toolbox copying /<>/.pybuild/cpython3_3.12/build/spotfinder/core_toolbox/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/core_toolbox creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/array_family copying /<>/.pybuild/cpython3_3.12/build/spotfinder/array_family/flex.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/array_family copying /<>/.pybuild/cpython3_3.12/build/spotfinder/array_family/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/array_family creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /<>/.pybuild/cpython3_3.12/build/spotfinder/command_line/mp_spotfinder_server_read_file.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /<>/.pybuild/cpython3_3.12/build/spotfinder/command_line/sweep_strength.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /<>/.pybuild/cpython3_3.12/build/spotfinder/command_line/image_viewer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /<>/.pybuild/cpython3_3.12/build/spotfinder/command_line/signal_strength.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /<>/.pybuild/cpython3_3.12/build/spotfinder/command_line/find_active_area.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /<>/.pybuild/cpython3_3.12/build/spotfinder/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /<>/.pybuild/cpython3_3.12/build/spotfinder/command_line/thin_client.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction copying /<>/.pybuild/cpython3_3.12/build/spotfinder/diffraction/geometry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction copying /<>/.pybuild/cpython3_3.12/build/spotfinder/diffraction/imagefiles.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction copying /<>/.pybuild/cpython3_3.12/build/spotfinder/diffraction/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction copying /<>/.pybuild/cpython3_3.12/build/spotfinder/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel copying /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel/correction_vector_plot.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel copying /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel/cxi_run3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel copying /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel/cxi_phil.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel copying /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel copying /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/wrappers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications copying /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/practical_heuristics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications copying /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/image_viewer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx copying /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx/ice2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx copying /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx/method2_resolution.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx copying /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx/ice_nztt.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx copying /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx/spotreporter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx copying /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx copying /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/stats_distl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications copying /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/signal_strength.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications copying /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications copying /<>/.pybuild/cpython3_3.12/build/spotfinder/exception.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder copying /<>/.pybuild/cpython3_3.12/build/cctbx_eltbx_henke_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_random_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_connected_component_algorithm_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_array_family_flex_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/boost_python_hybrid_times_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/iotbx_pdb_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/iotbx_dtrek_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx copying /<>/.pybuild/cpython3_3.12/build/ccp4io_adaptbx/copy_files.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx copying /<>/.pybuild/cpython3_3.12/build/ccp4io_adaptbx/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx copying /<>/.pybuild/cpython3_3.12/build/ccp4io_adaptbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx copying /<>/.pybuild/cpython3_3.12/build/determine_unit_cell_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_array_family_flex_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cma_es copying /<>/.pybuild/cpython3_3.12/build/cma_es/run_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cma_es copying /<>/.pybuild/cpython3_3.12/build/cma_es/cma_es_interface.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cma_es copying /<>/.pybuild/cpython3_3.12/build/cma_es/tst_cma_es.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cma_es copying /<>/.pybuild/cpython3_3.12/build/cma_es/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cma_es copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx_python_streambuf_test_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_graphics_utils_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_graph_structure_comparison_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/smtbx_ab_initio_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/dxtbx_model_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_eltbx_tiny_pse_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_anharmonic_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_iso_surface_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx_boost_thread_test_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx copying /<>/.pybuild/cpython3_3.12/build/annlib_adaptbx/run_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx copying /<>/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx/self_match.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx copying /<>/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx/sample.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx copying /<>/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/source_generators copying /<>/.pybuild/cpython3_3.12/build/annlib_adaptbx/source_generators/generate_all.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/source_generators copying /<>/.pybuild/cpython3_3.12/build/annlib_adaptbx/source_generators/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/source_generators copying /<>/.pybuild/cpython3_3.12/build/annlib_adaptbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx copying /<>/.pybuild/cpython3_3.12/build/gltbx_fonts_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_geometry_primitive_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_dssp_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu copying /<>/.pybuild/cpython3_3.12/build/simtbx/gpu/tst_gpu_multisource_background.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu copying /<>/.pybuild/cpython3_3.12/build/simtbx/gpu/tst_shoeboxes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu copying /<>/.pybuild/cpython3_3.12/build/simtbx/gpu/tst_exafel_api.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu copying /<>/.pybuild/cpython3_3.12/build/simtbx/gpu/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu copying /<>/.pybuild/cpython3_3.12/build/simtbx/run_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling copying /<>/.pybuild/cpython3_3.12/build/simtbx/modeling/forward_models.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling copying /<>/.pybuild/cpython3_3.12/build/simtbx/modeling/predictions.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling copying /<>/.pybuild/cpython3_3.12/build/simtbx/modeling/FormatHDF5AttributeGeometry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling copying /<>/.pybuild/cpython3_3.12/build/simtbx/modeling/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_input.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_gui_dialogs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_mosaic.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_multisource_background.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_cbf_write.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_beam.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_gui_frames.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_minimal.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_multipanel.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_threads.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_anisotropic_mosaicity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_crystal.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_gui_init.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_gaussian_mosaicity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/anisotropic_mosaicity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_gaussian_mosaicity2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_pilatus.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_gauss_argchk.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_basic.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/sim_data.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/pixel copying /<>/.pybuild/cpython3_3.12/build/simtbx/pixel/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/pixel creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/parameter_errors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/stage_two_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/base_refiner.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/monoclinic.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/tetragonal.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/orthorhombic.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/hexagonal.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/stage_two_refiner.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/parameters.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/hopper_ensemble_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/phil.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/hopper_io.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/psf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/hopper_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/ensemble_refine_launcher.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/prep_stage2_input.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/device.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/attr_list.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/mpi_logger.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/kokkos copying /<>/.pybuild/cpython3_3.12/build/simtbx/kokkos/tst_kokkos_lib.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/kokkos copying /<>/.pybuild/cpython3_3.12/build/simtbx/kokkos/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/kokkos copying /<>/.pybuild/cpython3_3.12/build/smtbx_array_family_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/iotbx_ccp4_map_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/smtbx_refinement_least_squares_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_metric_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_masks_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_sgtbx_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/browser.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/process_control.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/layout.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/polygon.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/ensemble_validation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/mtz_dump.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/heavy_atoms.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/xtriage.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/errors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/app.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports copying /<>/.pybuild/cpython3_3.12/build/wxtbx/reports/blast.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports copying /<>/.pybuild/cpython3_3.12/build/wxtbx/reports/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports copying /<>/.pybuild/cpython3_3.12/build/wxtbx/reports/pdb_symmetry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports copying /<>/.pybuild/cpython3_3.12/build/wxtbx/wx4_compatibility.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/checklistctrl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/info_panels.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/custom_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/metallicbutton.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/tables.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/symmetry_dialog.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/listeditor.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/sequence_view.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/misc_dialogs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/icons.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots copying /<>/.pybuild/cpython3_3.12/build/wxtbx/plots/molprobity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots copying /<>/.pybuild/cpython3_3.12/build/wxtbx/plots/emringer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots copying /<>/.pybuild/cpython3_3.12/build/wxtbx/plots/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots copying /<>/.pybuild/cpython3_3.12/build/wxtbx/qstat_view.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line/loggraph.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line/xtriage.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line/inspect_r_free_flags.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line/anomalous_differences_histogram.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line/pdb_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line/wxpython.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line/plot_anomalous_scattering.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line/show_file_info.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line/b_plot.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line/plan_sad_experiment.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line/pdb_editor.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/wxtbx/anomalous_scattering.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/windows.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/b_plot.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/segmentedctrl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/adp_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/monitor.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/intctrl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/choice_multi.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/ints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/numbers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/strctrl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/tree.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/symop.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/choice.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/text_base.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/space_group.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/array_label.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/path.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/boolctrl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/floatctrl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/misc_ctrls.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/simple_dialogs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/tribool.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/strings.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/floats.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/unit_cell.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/path_dialogs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/polygon_db_viewer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/bitmaps.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/pdb_editor.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/boost_python_meta_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_emma_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_maptbx_bcr_bcr_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_tls_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_french_wilson_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_den_restraints_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_covariance_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_maptbx_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_math_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx copying /<>/.pybuild/cpython3_3.12/build/fftw3tbx/tst_ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx copying /<>/.pybuild/cpython3_3.12/build/fftw3tbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx copying /<>/.pybuild/cpython3_3.12/build/fftw3tbx/libtbx_refresh.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx_building_loop_closure_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_statistics_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_reference_coordinate_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_dmtbx_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_pair_interaction_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/smtbx_structure_factors_direct_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_uctbx_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/boost_rational_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_max_lik_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_geometry_sphere_surface_sampling_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_multipolar_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/regression_test_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/iotbx_dsn6_map_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_asymmetric_map_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/spotfinder_distltbx_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cma_es_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/rstbx_indexing_api_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_eltbx_xray_scattering_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_scaling_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_stl_vector_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/dxtbx_masking_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/hybrid_times.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/run_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/graph_structure_comparison.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/maximum_clique.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/utility.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/connected_component_algorithm.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/metric.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/breadth_first_search.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/minimum_cut_enumerate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/min_cut_max_flow.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/clustering_algorithm.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/optional.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/tuple.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/std_pair.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/rational.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/python.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/double_overflow.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/show_platform_info.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/inexact.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/lcm.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/divide_by_zero.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/show_environ_usage.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/int_overflow.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/gcd.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/segmentation_fault.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/libtbx_refresh.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx_imageset_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/iotbx_detectors_bruker_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/smtbx_refinement_constraints_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/multipolar.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/math_module.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/dmtbx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/view_fft_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/space_subgroups.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/neutron_structure_factors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/unit_cell_refinement.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/tst_phase_o_phrenia.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/tst_exp_i_alpha_derivatives.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/all_axes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/ccp4_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/miller_transform.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/fft_map_electron_density_around_atom.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/lebedev_2005_perturbation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/reduced_cell_two_folds.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/exp_i_alpha_derivatives.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/cr2o3_primitive_cell.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/tst_structure_factor_derivatives_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus/sites_derivatives.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus/site_derivatives.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus/u_star_derivatives.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/g_exp_i_alpha_derivatives.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/tst_space_subgroups.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/analyze_adp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_derivatives_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_derivatives_3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/maximum_subgroups.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/f_model_example.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/steve_collins.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/change_hand_p31.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/list_non_principal_continuous_shifts.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/symops_530.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/tst_structure_factor_derivatives_4.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/le_page_1982_vs_lebedev_2005.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/space_group_matrices.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/map_skewness.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging/test_levenberg_sparse.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa/per_lattice_postrefinement.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa/scale.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa/join.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging/sigma_correction.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging/task4.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging/tst_permutations.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging/data_subset.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging/test1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging/show_results.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging/data_utilities.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging/test_cc_half.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_derivatives.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/sub_group_graph.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/trigonal_r_vs_tetragonal_i.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/miller_common_sets.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/tst_g_exp_i_alpha_derivatives.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/find_distances_using_cpp_objects.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/find_sys_abs_equiv_space_groups.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/site_symmetry_constraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/random_puckers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/unit_cell_minimizers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/tst_structure_factor_derivatives_3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/hirshfeld_test.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/location_part.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/g_exp_i_partial_derivatives.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/random_f_calc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/cr2o3_consistency_checks.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_derivatives_4.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/adp_symmetry_constraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/convert_ccp4_symop_lib.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/tst_structure_factor_derivatives.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/site_symmetry_table.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/quartz_structure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/getting_started.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/phase_o_phrenia.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/covariance copying /<>/.pybuild/cpython3_3.12/build/cctbx/covariance/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/covariance copying /<>/.pybuild/cpython3_3.12/build/cctbx/french_wilson.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/run_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/real_space_refinement_simple.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/auto_sharpen.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/segment_and_split_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_interpolation_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/box.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/refine_sharpening.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/mem.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_atom_curves.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_bcr.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/resolution_from_map_and_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/prepare_map_for_docking.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/minimization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_resolution_from_map_and_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/mask.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_atom_radius_as_central_peak_width.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_interpolation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/refine_scales_errors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_loft.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_target_and_gradients.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/map_symmetry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_ccp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_get_percentile_cutoffs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_asymmetric_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/bcr copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/bcr/bcr.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/bcr copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/bcr/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/bcr copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_real_space_refinement_simple.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_peak_volume_estimate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_map_peak_3d_as_2d.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_mask.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/neutron copying /<>/.pybuild/cpython3_3.12/build/cctbx/neutron/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/neutron creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/from_scatterers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/global_counters.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/gradients_fft.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/from_scatterers_fft.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/from_scatterers_direct.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/misc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/gradients_base.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/from_scatterers_direct_parallel.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/gradient_flags.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/gradients_direct.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/gradients.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/observations copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/observations/tst_observations.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/observations copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/observations/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/observations copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/scatterer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/minimization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/target_functors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/weighting_schemes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/targets/tst_shelxl_wght_ls.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/targets/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/targets/tst_r1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/targets/r1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/observation_types.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/fmt_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/debug_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/tst_cns_epsilon.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/structure_factor_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/approx_amplitude_vs_resolution.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/space_group_option_parser.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/direct_or_fft.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/make_settings.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/random_structure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/github.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/electron_density_sampling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/run_shelx76.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/tst_cns_hl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/create_models_or_maps.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/make_cns_input.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/cns_density_modification.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/run_shelx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/macro_mol copying /<>/.pybuild/cpython3_3.12/build/cctbx/macro_mol/rotation_parameters.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/macro_mol copying /<>/.pybuild/cpython3_3.12/build/cctbx/macro_mol/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/macro_mol creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /<>/.pybuild/cpython3_3.12/build/cctbx/crystal/reindex.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /<>/.pybuild/cpython3_3.12/build/cctbx/crystal/tst_super_cell.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /<>/.pybuild/cpython3_3.12/build/cctbx/crystal/tst_distance_based_connectivity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /<>/.pybuild/cpython3_3.12/build/cctbx/crystal/burzlaff_zimmermann_dewolff.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /<>/.pybuild/cpython3_3.12/build/cctbx/crystal/super_cell.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /<>/.pybuild/cpython3_3.12/build/cctbx/crystal/find_best_cell.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /<>/.pybuild/cpython3_3.12/build/cctbx/crystal/distance_based_connectivity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /<>/.pybuild/cpython3_3.12/build/cctbx/crystal/direct_space_asu.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /<>/.pybuild/cpython3_3.12/build/cctbx/crystal/tst_ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /<>/.pybuild/cpython3_3.12/build/cctbx/crystal/close_packing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /<>/.pybuild/cpython3_3.12/build/cctbx/crystal/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /<>/.pybuild/cpython3_3.12/build/cctbx/crystal/coordination_sequences.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_geometry_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_geometry_restraints_lbfgs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_grouped_data.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_diffuse.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_fft_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_reciprocal_space_asu.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_show_cosets.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_pointgroup_tools.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_r_free_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_loc_res.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_fast_nv1995.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_maptbx_mask.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_pair_asu_table.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_amplitude_normalisation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_change_basis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_space_group_type_tidy_cb_op_t.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_wilson_plot.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_triplet_generator.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_fcalc_fft_stability.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_mem_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_adp_constraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_find_best_cell.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_refine_xray_curvs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_expand_to_p1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_lookup_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_coordination_sequences.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_data_manipulation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_reflection_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_crystal.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_statistics_graphs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_web_change_basis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_lattice_symmetry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_harker.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_map_is_periodic.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sf_low_res_accuracy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_grm_modifications.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_french_wilson.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_twin_target.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_denominators.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_map_weights_for_symmetry_summation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_direct_scaling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_wavelength_units.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_connectivity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_grm_pickling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_tidy_pickling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_crystal_asu_clusters.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_adp_aniso_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray_fast_gradients.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_krivy_gruber.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_double_step_filtration.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_geometry_restraints_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_maptbx_box.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray_derivatives.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_adp_constraints_cartesian.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_subgroups.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_f_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_prepare_map_for_docking.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray_minimization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_direct_space_asu.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_connectivity_allsym.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_weighting_schemes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_emma.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray_minimization_failure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_site_constraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_fourier_transform_real_part_at_x.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_create_models_or_maps.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_merge_equivalents.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray_target_functors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sphericity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_mem.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_crystal_close_packing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sampled_model_density.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_itvb_2001_table_a1427_hall_symbols.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_math_module.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_special_op_simplifier.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_maptbx_structure_factors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/plane_groups.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/cosets.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/sys_abs_equiv.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/rational_matrices_point_groups.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/reticular_twin_laws.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/proto/tst_asu.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/proto/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/facet_analysis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/check_redundancies.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/short_cuts.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/cut_plane.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/reference_table.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/show_cosets.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/reticular_pg_tools.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/pointgroup_tools.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/symbol_confidence.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/subgroups.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/lattice_symmetry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/literal_description.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/sub_lattice_tools.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/harker.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/bravais_types.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/icsd_radii.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/tiny_pse.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/neutron.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/formula.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/sasaki.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/fp_fdp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/combine_fits.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/create_n_gaussian_raw_cpp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/format_gaussian_fits.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/rez_rez_grant.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/itvc_approx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/itvc_fits.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/kissel_fits.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/itvc_kissel.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/hydrogen_plots.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/itvc_cross_validation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/itvc_section61_io.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/kissel_io.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/e_scattering_plots.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/van_der_waals_radii.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/e_scattering.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/distance_based_connectivity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/henke.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/xray_scattering copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/xray_scattering/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/xray_scattering copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/attenuation_coefficient.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/chemical_elements.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/read_custom_scattering_dict.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/covalent_radii.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/gaussian_fit.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/wavelengths.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/euclidean_model_matching.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/source_generators/eltbx/generate_henke_cpp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/source_generators/eltbx/generate_sasaki_cpp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/source_generators/eltbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/source_generators/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators copying /<>/.pybuild/cpython3_3.12/build/cctbx/source_generators/flex_fwd_h.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators copying /<>/.pybuild/cpython3_3.12/build/cctbx/crystal_orientation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/merging copying /<>/.pybuild/cpython3_3.12/build/cctbx/merging/brehm_diederichs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/merging copying /<>/.pybuild/cpython3_3.12/build/cctbx/merging/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/merging copying /<>/.pybuild/cpython3_3.12/build/cctbx/run_examples.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/adp_restraints/tst_ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/adp_restraints/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/adp_restraints/energies.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/adp_restraints/flags.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/shelx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/frac_cart.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/change_hand.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/guide_to_notation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/jv_index.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/jv_asu.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/jvx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/web_links.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/dispatcher.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/all_axes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/change_basis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/cgi_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/io_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/multiple_cell.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/libtbx_help.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/wyckoff.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/replay.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/browse_settings.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/structure_factors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/structure_factors_pdb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/explore_symmetry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/emma.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/lattice_symmetry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/iotbx_cif_validate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/change_setting.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/phase_o_phrenia.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/array_family copying /<>/.pybuild/cpython3_3.12/build/cctbx/array_family/flex.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/array_family copying /<>/.pybuild/cpython3_3.12/build/cctbx/array_family/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/array_family copying /<>/.pybuild/cpython3_3.12/build/cctbx/symmetry_search.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/uctbx/reduction_base.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/uctbx/gruber_1973.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/uctbx/gruber_1973_table_1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/determine_unit_cell copying /<>/.pybuild/cpython3_3.12/build/cctbx/uctbx/determine_unit_cell/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/determine_unit_cell copying /<>/.pybuild/cpython3_3.12/build/cctbx/uctbx/krivy_gruber_1976.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/uctbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_proxy_registry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_angle_derivs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/linking_class.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_process_nonbonded_proxies.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/auto_linking_types.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/base_geometry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/distance_least_squares.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/standard_cif_links.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/lbfgs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/process_nonbonded_proxies.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/energies.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_nonbonded_overlaps.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/nonbonded_overlaps.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/flags.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_motif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/masks copying /<>/.pybuild/cpython3_3.12/build/cctbx/masks/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/masks creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/auto_sharpen.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/segment_and_split_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/wavelength_units.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/samosa_scale.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/precession_view.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/version.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/diffuse.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/euclidean_model_matching.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/structure_factor_timings.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/space_group_info.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/cod_select_and_pickle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/brehm_diederichs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/find_reticular_twin_laws.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/cctbx_test_nightly.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/subgroups.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/samosa_join.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/xray_structure.show.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/eltbx.show_fp_fdp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/form_factor_query.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/translation_search.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/r_free_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller copying /<>/.pybuild/cpython3_3.12/build/cctbx/miller/tst_reindexing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller copying /<>/.pybuild/cpython3_3.12/build/cctbx/miller/reindexing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller copying /<>/.pybuild/cpython3_3.12/build/cctbx/miller/display.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller copying /<>/.pybuild/cpython3_3.12/build/cctbx/miller/tst_map_to_asu_isym.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller copying /<>/.pybuild/cpython3_3.12/build/cctbx/miller/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller copying /<>/.pybuild/cpython3_3.12/build/cctbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/libtbx_refresh.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/anharmonic.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /<>/.pybuild/cpython3_3.12/build/cctbx/omz/tst_dev.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /<>/.pybuild/cpython3_3.12/build/cctbx/omz/tst_bfgs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /<>/.pybuild/cpython3_3.12/build/cctbx/omz/tardy_adaptor.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /<>/.pybuild/cpython3_3.12/build/cctbx/omz/dev.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /<>/.pybuild/cpython3_3.12/build/cctbx/omz/cod_refine.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /<>/.pybuild/cpython3_3.12/build/cctbx/omz/cif_refine.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /<>/.pybuild/cpython3_3.12/build/cctbx/omz/cod_select_and_pickle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /<>/.pybuild/cpython3_3.12/build/cctbx/omz/bfgs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /<>/.pybuild/cpython3_3.12/build/cctbx/omz/eval_iso_vs_refined.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /<>/.pybuild/cpython3_3.12/build/cctbx/omz/pdb_dev.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /<>/.pybuild/cpython3_3.12/build/cctbx/omz/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /<>/.pybuild/cpython3_3.12/build/cctbx/adptbx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx_eltbx_covalent_radii_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/grow_density.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/map_tools.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage copying /<>/.pybuild/cpython3_3.12/build/mmtbx/kinemage/validation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage copying /<>/.pybuild/cpython3_3.12/build/mmtbx/kinemage/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage copying /<>/.pybuild/cpython3_3.12/build/mmtbx/real_space_correlation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /<>/.pybuild/cpython3_3.12/build/mmtbx/maps/tst_correlation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /<>/.pybuild/cpython3_3.12/build/mmtbx/maps/tst_composite_omit_map_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /<>/.pybuild/cpython3_3.12/build/mmtbx/maps/kick.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /<>/.pybuild/cpython3_3.12/build/mmtbx/maps/fem.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /<>/.pybuild/cpython3_3.12/build/mmtbx/maps/polder.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /<>/.pybuild/cpython3_3.12/build/mmtbx/maps/correlation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /<>/.pybuild/cpython3_3.12/build/mmtbx/maps/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /<>/.pybuild/cpython3_3.12/build/mmtbx/maps/mtriage.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /<>/.pybuild/cpython3_3.12/build/mmtbx/maps/tst_composite_omit_map_3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /<>/.pybuild/cpython3_3.12/build/mmtbx/maps/tst_map_model_cc_and_vals_per_atom_xtal.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /<>/.pybuild/cpython3_3.12/build/mmtbx/maps/fobs_minus_fobs_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /<>/.pybuild/cpython3_3.12/build/mmtbx/maps/superpose.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /<>/.pybuild/cpython3_3.12/build/mmtbx/maps/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /<>/.pybuild/cpython3_3.12/build/mmtbx/maps/tst_composite_omit_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /<>/.pybuild/cpython3_3.12/build/mmtbx/maps/map_model_cc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /<>/.pybuild/cpython3_3.12/build/mmtbx/maps/composite_omit_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /<>/.pybuild/cpython3_3.12/build/mmtbx/invariant_domain.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_4.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_validate_H.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_fd_3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/connectivity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_fd_5.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/riding.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_8.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_add_hydrogen_3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_fd_1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_coefficients.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_fd_4.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_7.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_minimize.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_add_hydrogen_0.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/parameterization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_5.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/find.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_add_hydrogen_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_connectivity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_9.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_fd_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/build_hydrogens.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/validate_H.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/specialised_hydrogen_atoms.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_6.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_add_hydrogen.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/reduce_hydrogen.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename/suitenout.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename/mainchain.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename/transdent.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename/suiteninput.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename/dualparse.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename/suiteninit.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename/suitenamedefs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename/diangle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename/suitealyze.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename/suitename.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename/suites.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa copying /<>/.pybuild/cpython3_3.12/build/mmtbx/sisa/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /<>/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_util.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /<>/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_input.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /<>/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_ga.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /<>/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_optimize.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /<>/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_mtz.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /<>/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_masks.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /<>/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon copying /<>/.pybuild/cpython3_3.12/build/mmtbx/polygon/tst_gui.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon copying /<>/.pybuild/cpython3_3.12/build/mmtbx/polygon/tst_polygon_data.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon copying /<>/.pybuild/cpython3_3.12/build/mmtbx/polygon/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon copying /<>/.pybuild/cpython3_3.12/build/mmtbx/polygon/output.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon copying /<>/.pybuild/cpython3_3.12/build/mmtbx/polygon/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/alignment copying /<>/.pybuild/cpython3_3.12/build/mmtbx/alignment/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/alignment copying /<>/.pybuild/cpython3_3.12/build/mmtbx/run_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/tls/analysis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/tls/tls_as_xyz.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/tls/optimise_amplitudes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/tls/perm15.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/tls/command_line.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/tls/perm10.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/tls/perm12.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/tls/perm13.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/tls/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/tls/perm14.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/tls/ladp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/tls/tools.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/tls/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/tls/decompose.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/tls/perm11.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/model_vs_data.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /<>/.pybuild/cpython3_3.12/build/mmtbx/disorder/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /<>/.pybuild/cpython3_3.12/build/mmtbx/disorder/tst_analyze_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /<>/.pybuild/cpython3_3.12/build/mmtbx/disorder/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /<>/.pybuild/cpython3_3.12/build/mmtbx/disorder/backbone.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /<>/.pybuild/cpython3_3.12/build/mmtbx/disorder/tst_backbone.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /<>/.pybuild/cpython3_3.12/build/mmtbx/disorder/analyze_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /<>/.pybuild/cpython3_3.12/build/mmtbx/domains_from_pae.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den copying /<>/.pybuild/cpython3_3.12/build/mmtbx/den/refinement.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den copying /<>/.pybuild/cpython3_3.12/build/mmtbx/den/plot_weights.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den copying /<>/.pybuild/cpython3_3.12/build/mmtbx/den/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/solvent/map_to_water.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/solvent/ensemble_ordered_solvent.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/solvent/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/solvent/ordered_solvent.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/extend_sidechains.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/tst_make_library.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/tst_extend_sidechains_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/make_library.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/minimize_chain.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/berkeley_ramalyze.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/custom_gm.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/ccd.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/starting_conformations.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/cablam_idealization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/ligands/lifi.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/ligands/tst_00.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/ligands/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/tst_extend_sidechains.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/loop_idealization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/merge_models.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/f_model/f_model_info.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/f_model/f_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/f_model/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /<>/.pybuild/cpython3_3.12/build/mmtbx/utils/tst_switch_rotamers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /<>/.pybuild/cpython3_3.12/build/mmtbx/utils/ntc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /<>/.pybuild/cpython3_3.12/build/mmtbx/utils/rotatable_bonds.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /<>/.pybuild/cpython3_3.12/build/mmtbx/utils/fab_elbow_angle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /<>/.pybuild/cpython3_3.12/build/mmtbx/utils/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /<>/.pybuild/cpython3_3.12/build/mmtbx/utils/grid2d.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning copying /<>/.pybuild/cpython3_3.12/build/mmtbx/twinning/probabalistic_detwinning.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning copying /<>/.pybuild/cpython3_3.12/build/mmtbx/twinning/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning copying /<>/.pybuild/cpython3_3.12/build/mmtbx/twinning/twin_f_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/model/restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/model/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/model/statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/model/model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/model/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/real_space/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/real_space/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/real_space creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/example2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/scaler.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/example.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/f_model_all_scales.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_aniso_scaler.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/multi_mask_bulk_solvent.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/mosaic.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/kbu_refinery.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_mosaic.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_flat_nonuniform.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_bulk_solvent_and_scaling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/bulk_solvent_and_scaling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_scaler.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components copying /<>/.pybuild/cpython3_3.12/build/mmtbx/chemical_components/cif_parser.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components copying /<>/.pybuild/cpython3_3.12/build/mmtbx/chemical_components/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components copying /<>/.pybuild/cpython3_3.12/build/mmtbx/chemical_components/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder_1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_probe.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_msa.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_isomorphous_difference_misc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_maps_misc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_model_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_angle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_ligand_ncs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_process_predicted_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_geo_min_restraints_phil.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_table_one.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_real_space_correlation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_schrodinger_interface.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_adp_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_refine_anomalous_substructure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_add_arrows_on_plot.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_command_line_input.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_reduce_timeout.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_map_coeffs_simple.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_sequence_validation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_loop_closure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_multi_residue_class.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_ringer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_fmodel.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_cis_trans_peptide_link.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_4muy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_get_t_scheme.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls_analysis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls_optimise_amplitudes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_01.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_00.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_04.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls_refinement_fft.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_2igd.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls_as_xyz.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_02.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_03.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/make_fake_anomalous_data.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_helix_sheet_recs_as_pdb_files.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_cablam.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder_ccs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_add_h_to_water.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_flipping_his.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_model_vs_sequence.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_cif_as_mtz_wavelengths.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_find_ncs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_ml_estimate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_pdbtools.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_statistics_output.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_validate_ligands.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_utils_merge_models.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_get_vdw_radii.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_remove_alternative_conformations.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_mtrix.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_cart_ref_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_ramachandran.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_dedeuterate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_biomt_mtrix.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_symmetry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_merge.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_biomt_mtrix_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_ncs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_tors_ref_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_neutralize_scatterers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_set_hydrogen_bond_length.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_geometry_minimization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_cc_star.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_alignment.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_map_type_parser.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_chain_comparison.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_fix_rotamer_outliers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_fmodel_misc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_prune_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_regularize_from_pdb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder_3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_rank_scale_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_apply_cif_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_altloc_chain_break.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_model_vs_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_origin_ids.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_ncs_search_flips.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_ncs_restraints_group_list.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_geometry_minimization_ncs_constraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints_real_space.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_ncs_search.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_ncs_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_mtz2map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_domains_from_pae.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_models_to_from_chains.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_rigid_bond_test.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_dynamics_cli.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_map_model_cc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_examples.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_sort_hetatms.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_find_ss_structure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_clashes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_minimize_chain.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_fmodel_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_special_term_at_end.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_scattering_type_registry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_metal_link_1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_fmodel_fd.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_psi_phi_extraction.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder_box.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_fmodel_no_cryst1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_validation_summary.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_altloc_remediate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_reduce.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_sampled_model_density.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_anomalous_substructure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_superpose.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_validate_mg.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pick_approx_zn.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_validate_ca.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_geometries.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/geometry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/identify.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/environment.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pick_k.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pick_ca_svm.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pickle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_environment.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/svm/dump_sites.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/svm/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/svm/tst_classifier.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/svm/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_symmetry_axis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_parameters.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/build.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pick_ca.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pick_mg.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/halides.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/process_predicted_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/tst_segid.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/ss_validation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/secondary_structure_params.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/tst_insertion_codes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/proteins.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/find_ss_from_ca.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/regularize_from_pdb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/nucleic_acids.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/tst_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/ss_idealization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/tst_3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/tst_1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/tst_io.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/tst_ss_id_ncs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rsr copying /<>/.pybuild/cpython3_3.12/build/mmtbx/rsr/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rsr copying /<>/.pybuild/cpython3_3.12/build/mmtbx/rsr/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rsr creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry/altloc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry/topology.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry/clash.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry/shared_types.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry/sphere_surface_sampling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry/asa.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry/indexing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /<>/.pybuild/cpython3_3.12/build/mmtbx/restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /<>/.pybuild/cpython3_3.12/build/mmtbx/rotamer/ramachandran_eval.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /<>/.pybuild/cpython3_3.12/build/mmtbx/rotamer/tst_geostd_vs_sidechain_angles_props.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /<>/.pybuild/cpython3_3.12/build/mmtbx/rotamer/nqh.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /<>/.pybuild/cpython3_3.12/build/mmtbx/rotamer/ramachandran_eval_deprecated.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /<>/.pybuild/cpython3_3.12/build/mmtbx/rotamer/graphics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /<>/.pybuild/cpython3_3.12/build/mmtbx/rotamer/tst_rotamer_eval.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /<>/.pybuild/cpython3_3.12/build/mmtbx/rotamer/rotamer_eval.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /<>/.pybuild/cpython3_3.12/build/mmtbx/rotamer/n_dim_table.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /<>/.pybuild/cpython3_3.12/build/mmtbx/rotamer/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /<>/.pybuild/cpython3_3.12/build/mmtbx/rotamer/sidechain_angles.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/cif_triage.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_metal_coordination.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_cif_triage.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_correct_hydrogens.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/idealized_aa.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_selection.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_chg.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_geo_reduce_for_tardy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_rna_dna_interpretation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/pdb_interpretation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/populate_auto_linking_origin_ids.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_pdb_interpretation_ncs_processing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_tyr_from_gly_and_bnz.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_iron_sulfur_clusters.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/correct_hydrogen_geometries.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_glyco_coordination.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_cif_types.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_superpose_ideal.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/server.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/rotamer_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_rotamer_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/linking_mixins.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/conformation_dependent_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/linking_setup.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_protein_interpretation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/cif_types.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_carbo_linking.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_linking.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_idealized_aa.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/rna_sugar_pucker_analysis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/glyco_chiral_values.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/glyco_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/hydrogen_restrictions.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_paral_geo.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_all_cif_files.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_pdb_interpretation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_neutron_distance.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_pdb_interpretation_3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_deuterium_terminii.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_pdb_interpretation_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_server.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/conv_v2_v3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/linking_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_glyco_hand.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_rna_sugar_pucker_analysis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_motif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/bondlength_defaults.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/pdb_distances.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/cbd_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/barbed_wire_analysis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/analyze_peptides.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/waters.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/ligands.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/cbetadev.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/model_properties.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/ensembles.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/mean_devs_VAL_THR_ILE_phi_psi.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/comparama.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/chain_comparison.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/evalurama.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/probescore_ligand.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/mp_geo.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/kinemage_templates.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/datasets.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_experimental.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_waters.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_mp_geo_endtoend.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_find_region_max_value.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_omegalyze.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_mp_validate_bonds.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_rama_z_01.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_chiral_validation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_mp_geo.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/run_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_cablam.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_undowser.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_keep_hydrogens.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_do_flips_clashscore.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_rna_validate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_rama_z_02.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_clashscore.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_model_properties.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_mp_geo_chiral_volume_cases.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_ramalyze2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_cbetadev.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_suitename.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_5.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_arguments.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_symmetry_SS.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_cbetadev_02.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_ramalyze.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_clashscore_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_hydrogen_addition_clashscore.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_4.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_cablam_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_rotalyze.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/mp_validate_bonds.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/graphics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/ramalyze.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/sequence.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/cablam.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ramachandran copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/ramachandran/convert_from_text.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ramachandran copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/ramachandran/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ramachandran copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/experimental.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/mean_devs_others_phi_psi.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/fav_lists.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/comprehensive_residue.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/undowser.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/rna_validate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/rotalyze.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/rama_z.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/clashscore.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/omegalyze.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/validate_ligands.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/convert_lists.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/mean_devs_PRO_phi_psi.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /<>/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_05.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /<>/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_02.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /<>/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/pair_interaction.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /<>/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_00.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /<>/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_04.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /<>/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_01.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /<>/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /<>/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_03.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/atom_selection.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/arginine_geometry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/ss_validation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/barbed_wire_analysis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/reduce2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/ss_idealization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/probescore_ligand.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/quantum_interface.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/cbetadev.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/ntc_validation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/suitename_old.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/polder.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/probe2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/prepare_pdb_deposition.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/comparama.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/evalurama.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/rna_validate_puckers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/rna_validate_suites.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/process_predicted_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/mp_validate_bonds.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/emringer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/water_b_factors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/mask.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/ramalyze.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/chiral_validation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/cablam.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/hydrogenate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/cablam_idealization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/suitename.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/undowser.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/rna_validate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/pdbtools.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/rotalyze.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/rna_validate_bonds.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/pdb_as_cif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/rama_z.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/hbond.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/nonbonded_overlaps.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/clashscore.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/omegalyze.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/validate_ligands.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/arrays.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/f_model_info.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/proq2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_refinement_flags.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_real_space_simple.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_select_best_starting_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_anomalous_scatterer_groups.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/rigid_body.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/print_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/tardy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/targets.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/select_best_starting_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_misc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/minimization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/refinement_flags.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/geometry_minimization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/adp_refinement.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/group.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_group.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/inspect_tardy_trajectory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_rigid_body.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/fit_his.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/fit_water.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_1H.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/individual_sites.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/flipbase.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_weight.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_individual_sites_3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_0.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_aa_residue_axes_and_clusters.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/rigid_body.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_selection.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_flipbase.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_monitor.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_5.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_individual_sites_1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_rigid_body.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/fit_residue.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/weight.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_1H.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_7.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_0H.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/adp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/fit_small_molecule.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_4.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_individual_sites_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/explode_and_refine.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_4.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_6.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_water.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/occupancy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_6.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/fit_residues.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_5.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_group_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/flip_peptide_side_chain.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/wx_tardy_pdb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/orca.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/weights_params.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/minimization_ncs_constraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/anomalous_scatterer_groups.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_fit_rotamers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/energy_monitor.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/ensemble_refinement/ensemble_probability.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/ensemble_refinement/ensemble_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/ensemble_refinement/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/minimization_monitor.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/occupancies.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_occupancy_selections.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ligands/electrons.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ligands/tst_ready_set_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ligands/xtal_screens.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ligands/tst_xtal_screens.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ligands/ready_set_basics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ligands/chemistry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ligands/hierarchy_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ligands/rdkit_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ligands/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ligands/ready_set_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /<>/.pybuild/cpython3_3.12/build/mmtbx/msa.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/massage_twin_detwin_data.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_bayesian_estimator.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/relative_scaling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/fa_estimation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/xtriage.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/fest.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/bayesian_estimator.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/pair_analyses.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/mean_f_rms_f.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_massage_data.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/rip_scale.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_plan_sad_experiment.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_mean_f_rms_f.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_scaling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/twmad_scale.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/absolute_scaling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/data_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_xtriage_twin_analyses.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/pre_scale.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/matthews.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/twin_analyses.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/make_param.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/absence_likelihood.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/siras_scale.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/relative_wilson.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_outlier.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/ta_alpha_beta_calc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/thorough_outlier_test.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_sigmaa.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/outlier_plots.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_xtriage.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/remove_outliers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_absences.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/basic_analyses.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/sad_scale.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/absences.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/sigmaa_estimation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/plan_sad_experiment.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/random_omit.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/sir_scale.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/outlier_rejection.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/superpose.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/atomic_environment_vectors copying /<>/.pybuild/cpython3_3.12/build/mmtbx/atomic_environment_vectors/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/atomic_environment_vectors copying /<>/.pybuild/cpython3_3.12/build/mmtbx/atomic_environment_vectors/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/atomic_environment_vectors creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ncs/tncs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ncs/ligands.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ncs/ncs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ncs/cartesian_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ncs/ncs_restraints_group_list.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ncs/ncs_params.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ncs/ncs_search.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ncs/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ncs/ncs_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/lattice.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/xmanip.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/clashes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/qm_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/tst_c_beta_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/tst_reference_coordinate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/quantum_interface.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/geo_file_parsing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/tst_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/mopac_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/ramachandran.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/c_beta.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/afitt.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/tst_ramachandran.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/reference_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/orca_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/tst_reference_coordinate2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/tst_geo_file_parsing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/quantum_restraints_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/qi_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/reference.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/base_qm_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/external.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe copying /<>/.pybuild/cpython3_3.12/build/mmtbx/probe/CompareOriginalAndNewProbeAtomInfo.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe copying /<>/.pybuild/cpython3_3.12/build/mmtbx/probe/Helpers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe copying /<>/.pybuild/cpython3_3.12/build/mmtbx/probe/tst_mmtbx_probe_ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe copying /<>/.pybuild/cpython3_3.12/build/mmtbx/probe/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe copying /<>/.pybuild/cpython3_3.12/build/mmtbx/probe/AtomTypes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ias copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ias/tst_ias.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ias copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ias/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ias creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks copying /<>/.pybuild/cpython3_3.12/build/mmtbx/masks/tst_asu_mask.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks copying /<>/.pybuild/cpython3_3.12/build/mmtbx/masks/tst_masks.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks copying /<>/.pybuild/cpython3_3.12/build/mmtbx/masks/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/find_tls_groups.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/fix_rotamer_outliers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/estimate_bijvoet_ratio.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/show_r_factors_by_shell.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/flipbase.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/grow_density.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/arginine_geometry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/extend_sidechains.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/table_one.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/maximum_entropy_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/barbed_wire_analysis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/development_fem.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/model_vs_sequence.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/reduce2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/validate_ions.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/super.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/cablam_training.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/analyze_peptides.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/monomer_library.comp_as_motif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/ss_idealization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/maps.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/pdb_atom_selection.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/xtriage.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/probescore_ligand.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/real_space_correlation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/quantum_interface.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/secondary_structure_validation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/prune_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/fest.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/tls_as_xyz.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/tls_analysis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/models_as_chains.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/mp_geo.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/development.aev.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/validate_waters.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/pdb_interpretation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/select_best_starting_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/search_pdb_symmetry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/sisa.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/rigid_bond_test.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/model_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/cbetadev.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/analyze_static_disorder.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/ntc_validation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/model_model_distances.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/suitename_old.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/partial_omit_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/model_vs_data.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/polder.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/geometry_minimization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/simulate_low_res_data.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/emringer_score.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/pdb_view_ad_hoc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/probe2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/prepare_pdb_deposition.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/get_related_ensemble.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/validate_H_cl_app.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/density_modification.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/f000.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/matthews.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/cdl_lookup.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/massage_data.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/find_peaks_holes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/r_factor_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/comparama.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/fake_f_obs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/evalurama.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/molprobity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/fmodel.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/rna_validate_puckers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/compute_map_coefficients.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/anneal_real_space.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/afitt.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/rna_validate_suites.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/process_predicted_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/water_screen.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/mp_validate_bonds.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/emringer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/ringer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/compare_ligands.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/water_b_factors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/mask.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/ssm_rmsd_for_chains.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/find_residue_in_pdb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/verify_mon_lib_data.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/rebuild_rotarama_cache.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/fetch_pdb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/ramalyze.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/chiral_validation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/helix_sheet_recs_as_pdb_files.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/cablam.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/hydrogenate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/cablam_idealization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/chains_as_models.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/validation_summary.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/afitt_fd.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/map_box.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/fobs_minus_fobs_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/refine_anomalous_substructure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/rebuild_cablam_cache.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/superpose.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/tls.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/map_to_structure_factors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/suitename.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/xmanip.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/distance_difference.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/cablam_validate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/angle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/undowser.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/map_comparison.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/fab_elbow_angle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/rna_validate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/cif_as_mtz.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/remove_outliers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/cc_star.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/dynamics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/pdbtools.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/kinemage.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/apply_ncs_to_ligand.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/rotalyze.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/real_space_diff_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/secondary_structure_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/rna_validate_bonds.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/model_vs_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/mtz2map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/show_suspicious_residues.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/rama_z.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/hbond.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/nonbonded_overlaps.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/model_idealization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/rank_scale_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/altloc_remediate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/reciprocal_space_arrays.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/plan_sad_experiment.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/map_to_model_histogram.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/strip_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/mon_lib_cif_triage.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/clashscore.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/omegalyze.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/sort_hetatms.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/perigee.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/fmodel_simple.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/validate_ligands.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/fix_rama_outliers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam copying /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam/cablam_training.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam copying /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam/cablam_res.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam copying /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam/cablam_align.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam copying /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam/cablam_fingerprints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/fingerprints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam/fingerprints/antiparallel_beta.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/fingerprints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam/fingerprints/antiparallel_beta_bridge.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/fingerprints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam/fingerprints/parallel_beta.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/fingerprints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam/fingerprints/regular_helix_definitions.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/fingerprints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam/fingerprints/how_to.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/fingerprints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam/fingerprints/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/fingerprints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam/cablam_math.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam copying /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam/cablam_validate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam copying /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam copying /<>/.pybuild/cpython3_3.12/build/mmtbx/find_peaks.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/pdbtools.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik copying /<>/.pybuild/cpython3_3.12/build/mmtbx/max_lik/tst_maxlik.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik copying /<>/.pybuild/cpython3_3.12/build/mmtbx/max_lik/max_like_non_uniform.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik copying /<>/.pybuild/cpython3_3.12/build/mmtbx/max_lik/tst_max_lik.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik copying /<>/.pybuild/cpython3_3.12/build/mmtbx/max_lik/maxlik.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik copying /<>/.pybuild/cpython3_3.12/build/mmtbx/max_lik/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci copying /<>/.pybuild/cpython3_3.12/build/mmtbx/nci/data_filtering.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci copying /<>/.pybuild/cpython3_3.12/build/mmtbx/nci/tst_hbond.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci copying /<>/.pybuild/cpython3_3.12/build/mmtbx/nci/skew_kurt_plot.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci copying /<>/.pybuild/cpython3_3.12/build/mmtbx/nci/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci copying /<>/.pybuild/cpython3_3.12/build/mmtbx/nci/hbond.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci copying /<>/.pybuild/cpython3_3.12/build/mmtbx/xmanip_tasks.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce copying /<>/.pybuild/cpython3_3.12/build/mmtbx/reduce/InteractionGraph.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce copying /<>/.pybuild/cpython3_3.12/build/mmtbx/reduce/tst_mmtbx_reduce_ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce copying /<>/.pybuild/cpython3_3.12/build/mmtbx/reduce/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce copying /<>/.pybuild/cpython3_3.12/build/mmtbx/reduce/Movers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce copying /<>/.pybuild/cpython3_3.12/build/mmtbx/reduce/Optimizers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues copying /<>/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues/sample_rotamers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues copying /<>/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues/all_his.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues copying /<>/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues/rotamer_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues copying /<>/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues copying /<>/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues copying /<>/.pybuild/cpython3_3.12/build/mmtbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/libtbx_refresh.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /<>/.pybuild/cpython3_3.12/build/mmtbx/dynamics/simulated_annealing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /<>/.pybuild/cpython3_3.12/build/mmtbx/dynamics/ensemble_cd.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /<>/.pybuild/cpython3_3.12/build/mmtbx/dynamics/cartesian_dynamics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /<>/.pybuild/cpython3_3.12/build/mmtbx/dynamics/constants.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /<>/.pybuild/cpython3_3.12/build/mmtbx/dynamics/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /<>/.pybuild/cpython3_3.12/build/mmtbx/dynamics/tst_sa.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /<>/.pybuild/cpython3_3.12/build/mmtbx/dynamics/tst_cartesian_dynamics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /<>/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/rcsb_web_services.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /<>/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/tst_rcsb_web_services.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /<>/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/tst_standard_geometry_cif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /<>/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /<>/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /<>/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/standard_geometry_cif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /<>/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/tst_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /<>/.pybuild/cpython3_3.12/build/mmtbx/pdb_symmetry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/resolve_resources.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_omega_cdl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_mcl_02.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/nucleotides.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/multi_residue_cdl_class.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/mcl_sf4_coordination.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/investigate_rotamer_space.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/omega.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_cdl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_cdl_esd.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/altloc_weighting.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_mcl_01.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_rna_dna_fragments.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/rdl_database.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/metal_coordination_library.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/multi_base_class.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/testing_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/bond_angle_registry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/cdl_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/pH_dependent_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/mcl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/hpdl_database.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/rotamers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/density_dependent_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_mcl_03.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/cdl_setup.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/check_cdl_database.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/cdl_database.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_rdl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_hpdl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_cdl_nucleotides.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_pH_mechanism.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/LinkedResidues.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/hydrogen_bonding.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_multi_residue_rna.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/cdl_svl_database.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/histidines.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/omega_database.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_poly_ca_multi_residue.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/multi_residue_class.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_cis_c_n_ca.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/sf4_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_mutli_residue.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/density_modification copying /<>/.pybuild/cpython3_3.12/build/mmtbx/density_modification/tst_density_modification.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/density_modification copying /<>/.pybuild/cpython3_3.12/build/mmtbx/density_modification/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/density_modification creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ringer/tst_em_rscc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ringer/em_rolling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ringer/em_rscc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ringer/tst_emringer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ringer/emringer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ringer/em_scoring.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ringer/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /<>/.pybuild/cpython3_3.12/build/iotbx_mtz_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_alignment_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_rigid_body_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_min_cut_max_flow_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_fftpack_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/cli_parser.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/simple_parser.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/ranges.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/table_one.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/data_plots.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/map_tools.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/reflection_file_converter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/tst_detectors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/npy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/adsc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/macscience.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/adsc_minicbf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/edf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/noir.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/dtrek.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/hamamatsu.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/pilatus_slice.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/tst_debug_write.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/active_area_filter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/image_from_http_request.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/tst_adsc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/util copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/util/filters.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/util copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/util/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/util copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/beam_center_convention.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/tst_py_cbf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/cspad_detector_formats.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/url_support.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/raxis_nonsquare.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/marIP.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/context/config_detector.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/context/endstation_max_iv_trial.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/context/endstation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/context/spot_xy_convention.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/context/camera_convention.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/context/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/eiger.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/adsc_module.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/saturn.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/generic_detector.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/cbf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/bruker.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/tst_cbf_comp_read_meth.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/mar.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/test_raxis2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/test_mar.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/eiger_minicbf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/pilatus_minicbf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/detectorbase.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/raxis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/raxisbase.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /<>/.pybuild/cpython3_3.12/build/iotbx/examples/tst_mtz_free_flipper.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /<>/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_hierarchy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /<>/.pybuild/cpython3_3.12/build/iotbx/examples/prepare_model_for_rsr.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /<>/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_symmetry_copies.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /<>/.pybuild/cpython3_3.12/build/iotbx/examples/direct_methods_light.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /<>/.pybuild/cpython3_3.12/build/iotbx/examples/recalculate_phenix_refine_r_factors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /<>/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_split_chains.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /<>/.pybuild/cpython3_3.12/build/iotbx/examples/pdbx_mmcif_tutorial.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /<>/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_tardy_conf_sampling_simple.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /<>/.pybuild/cpython3_3.12/build/iotbx/examples/mtz_convert_free_to_work.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /<>/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_to_map_simple.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /<>/.pybuild/cpython3_3.12/build/iotbx/examples/mtz_free_flipper.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /<>/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_shake.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /<>/.pybuild/cpython3_3.12/build/iotbx/examples/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /<>/.pybuild/cpython3_3.12/build/iotbx/examples/shelx_latt_sym_to_space_group_symbol.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /<>/.pybuild/cpython3_3.12/build/iotbx/examples/libtbx_phil_examples.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /<>/.pybuild/cpython3_3.12/build/iotbx/pymol.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /<>/.pybuild/cpython3_3.12/build/iotbx/scalepack/merge.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /<>/.pybuild/cpython3_3.12/build/iotbx/scalepack/crystal_symmetry_from_hkl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /<>/.pybuild/cpython3_3.12/build/iotbx/scalepack/space_group_dictionary.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /<>/.pybuild/cpython3_3.12/build/iotbx/scalepack/tst_merge.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /<>/.pybuild/cpython3_3.12/build/iotbx/scalepack/tst_no_merge_original_index.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /<>/.pybuild/cpython3_3.12/build/iotbx/scalepack/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /<>/.pybuild/cpython3_3.12/build/iotbx/scalepack/no_merge_original_index.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek copying /<>/.pybuild/cpython3_3.12/build/iotbx/dtrek/dtrek_symmetry_dict.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek copying /<>/.pybuild/cpython3_3.12/build/iotbx/dtrek/reflnlist_reader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek copying /<>/.pybuild/cpython3_3.12/build/iotbx/dtrek/crystal_symmetry_from_ref.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek copying /<>/.pybuild/cpython3_3.12/build/iotbx/dtrek/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek copying /<>/.pybuild/cpython3_3.12/build/iotbx/format.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve copying /<>/.pybuild/cpython3_3.12/build/iotbx/solve/fpfm_reader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve copying /<>/.pybuild/cpython3_3.12/build/iotbx/solve/crystal_symmetry_from_inp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve copying /<>/.pybuild/cpython3_3.12/build/iotbx/solve/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve copying /<>/.pybuild/cpython3_3.12/build/iotbx/reflection_file_editor.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/map_model_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/run_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/crystal_symmetry_from_any.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/reflection_file_reader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_rna_dna_atom_names.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/modified_aa_names.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/atom_selection.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/remark_290_interpretation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/misc_records_output.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_secondary_structure_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_hierarchy_atom_sort.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/hybrid_36.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/records.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_read_mtrix_records_from_cif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_atom_selection_string.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/extract_rfactors_resolutions_sigma.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/secondary_structure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_hierarchy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/atom_name_interpretation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/xray_structure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/cryst1_interpretation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/nucleic_acid_codes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_tls.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_atom_selection.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_atom_name_interpretation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_pdb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/crystal_symmetry_from_pdb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_mmcif_hierarchy_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_hierarchy_flip_symmetric.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_mmcif_hierarchy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/remediation/remediator.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/remediation/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/remediation/tst_remediator.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/amino_acid_codes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/forward_compatible_pdb_cif_conversion.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/pdbe.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/mmcif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/modified_rna_dna_names.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/hierarchy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/pdb_v3_cif_conversion.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/aa_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/fetch.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_mmcif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_secondary_structure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/rcsb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_hierarchy_flip_symmetric_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/experiment_type.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/download.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/remark_2_interpretation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/remark_3_interpretation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/web_service_api.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/rna_dna_detection.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/phil.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /<>/.pybuild/cpython3_3.12/build/iotbx/cif/validation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /<>/.pybuild/cpython3_3.12/build/iotbx/cif/errors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /<>/.pybuild/cpython3_3.12/build/iotbx/cif/geometry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /<>/.pybuild/cpython3_3.12/build/iotbx/cif/citations.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /<>/.pybuild/cpython3_3.12/build/iotbx/cif/crystal_symmetry_from_cif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /<>/.pybuild/cpython3_3.12/build/iotbx/cif/restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /<>/.pybuild/cpython3_3.12/build/iotbx/cif/builders.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /<>/.pybuild/cpython3_3.12/build/iotbx/cif/model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /<>/.pybuild/cpython3_3.12/build/iotbx/cif/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /<>/.pybuild/cpython3_3.12/build/iotbx/cif/cod_tools.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /<>/.pybuild/cpython3_3.12/build/iotbx/cif/restraint_file_merge.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /<>/.pybuild/cpython3_3.12/build/iotbx/logfiles.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/builders_depending_on_smtbx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber copying /<>/.pybuild/cpython3_3.12/build/iotbx/kriber/strudat.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber copying /<>/.pybuild/cpython3_3.12/build/iotbx/kriber/tst_strudat.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber copying /<>/.pybuild/cpython3_3.12/build/iotbx/kriber/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_pdb_link_records.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_long_resname_1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_forward_compatible_pdb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_cif_1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_tools.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_xray_scale.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_pdb_as_cif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_sort_atoms.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_poscar.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_reindex.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_pdb_v3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_crystal_symmetry_from_any.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_long_chain_ids_1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_phil.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_restraints_merge.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_call_consistency.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_selected_hierarchy_flip.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_miller_sort_asu.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_cif_as_pdb_1atom.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_wildcard.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_model_sharpening_5.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_phases.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_external_sharpening_7.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_occupancies_rounding.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_mtz_as_cif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_pdbx_mmcif_tutorial.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_copy_select.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_group_rounding.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_reflection_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_simple_parser.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_4.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_patterson.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_atom_selections_10k.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_reflection_file_reader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_split_data_cif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_lattice_symmetry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_long_resname_4.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_fetch.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_generate_n_char_string.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_id_str.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_pdb_cif_inputs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_data_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_merging_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_export_scalepack_unmerged.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_simple_map_coefficients.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_manager_wrapping.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_user_selections.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_input.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_groups_preprocessing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_search_ligs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_mmcif_biomt_reduction_output.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_reordered_chains.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_search_broken_chain.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_without_validation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_long_resname_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_bioinformatics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_file_reader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_csv_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_data_plots.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_examples.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_mmcif_multimodel.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_long_resname_3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_box_around_molecule.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_extract_xtal_data.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_cli_parser.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_tls_from_map_8.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_reflection_file_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_add_conformations.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_split_models.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_all_chain_ids.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_show_systematic_absences.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_pdb_as_fasta.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_mmcif_segids.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_mmcif_to_from_hierarchy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_reflection_file_editor.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_symmetry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mrcfile copying /<>/.pybuild/cpython3_3.12/build/iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mrcfile copying /<>/.pybuild/cpython3_3.12/build/iotbx/mrcfile/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mrcfile copying /<>/.pybuild/cpython3_3.12/build/iotbx/poscar.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/symmetry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs copying /<>/.pybuild/cpython3_3.12/build/iotbx/programs/split_data_cif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs copying /<>/.pybuild/cpython3_3.12/build/iotbx/programs/box_around_molecule.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs copying /<>/.pybuild/cpython3_3.12/build/iotbx/programs/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs copying /<>/.pybuild/cpython3_3.12/build/iotbx/programs/unique_with_biomt.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs copying /<>/.pybuild/cpython3_3.12/build/iotbx/csv_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/phases.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/file_reader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/PrettyPrint copying /<>/.pybuild/cpython3_3.12/build/iotbx/PrettyPrint/tables.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/PrettyPrint copying /<>/.pybuild/cpython3_3.12/build/iotbx/PrettyPrint/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/PrettyPrint creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /<>/.pybuild/cpython3_3.12/build/iotbx/data_manager/common.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /<>/.pybuild/cpython3_3.12/build/iotbx/data_manager/restraint.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /<>/.pybuild/cpython3_3.12/build/iotbx/data_manager/phil.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /<>/.pybuild/cpython3_3.12/build/iotbx/data_manager/miller_array.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /<>/.pybuild/cpython3_3.12/build/iotbx/data_manager/real_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /<>/.pybuild/cpython3_3.12/build/iotbx/data_manager/ncs_spec.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /<>/.pybuild/cpython3_3.12/build/iotbx/data_manager/map_coefficients.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /<>/.pybuild/cpython3_3.12/build/iotbx/data_manager/sequence.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /<>/.pybuild/cpython3_3.12/build/iotbx/data_manager/model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /<>/.pybuild/cpython3_3.12/build/iotbx/data_manager/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /<>/.pybuild/cpython3_3.12/build/iotbx/mtz/tst_dano.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /<>/.pybuild/cpython3_3.12/build/iotbx/mtz/tst_unmerged.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /<>/.pybuild/cpython3_3.12/build/iotbx/mtz/tst_extract_from_symmetry_lib.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /<>/.pybuild/cpython3_3.12/build/iotbx/mtz/crystal_symmetry_from_mtz.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /<>/.pybuild/cpython3_3.12/build/iotbx/mtz/extract_from_symmetry_lib.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /<>/.pybuild/cpython3_3.12/build/iotbx/mtz/tst_ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /<>/.pybuild/cpython3_3.12/build/iotbx/mtz/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /<>/.pybuild/cpython3_3.12/build/iotbx/mtz/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /<>/.pybuild/cpython3_3.12/build/iotbx/mtz/tst_miller_dict.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /<>/.pybuild/cpython3_3.12/build/iotbx/merging_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ncs copying /<>/.pybuild/cpython3_3.12/build/iotbx/ncs/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ncs copying /<>/.pybuild/cpython3_3.12/build/iotbx/option_parser.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /<>/.pybuild/cpython3_3.12/build/iotbx/gui_tools/reflections.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /<>/.pybuild/cpython3_3.12/build/iotbx/gui_tools/models.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /<>/.pybuild/cpython3_3.12/build/iotbx/gui_tools/import_data_and_flags.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /<>/.pybuild/cpython3_3.12/build/iotbx/gui_tools/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /<>/.pybuild/cpython3_3.12/build/iotbx/gui_tools/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /<>/.pybuild/cpython3_3.12/build/iotbx/gui_tools/cif_conversions.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /<>/.pybuild/cpython3_3.12/build/iotbx/cif_mtz_data_labels.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map copying /<>/.pybuild/cpython3_3.12/build/iotbx/ccp4_map/crystal_symmetry_from_ccp4_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map copying /<>/.pybuild/cpython3_3.12/build/iotbx/ccp4_map/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map copying /<>/.pybuild/cpython3_3.12/build/iotbx/ccp4_map/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /<>/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/ncbi_blast_xml.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /<>/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/xmlbuild.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /<>/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/local_blast.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /<>/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/alignment_as_hsearch.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /<>/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/homologues.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /<>/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/pubmed.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /<>/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/pdb_info.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /<>/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/ebi_wu_blast_xml.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /<>/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /<>/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/structure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.b_factor_stats.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/shelx.as_cif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/mtz.dump.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/show_distances.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/reindex.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/split_data_cif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/cbf_read.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/cns.transfer_crystal_symmetry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/cns.reflection_reader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/isomorphous_difference_patterson.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/xplor.map.show_summary.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/reflection_file_converter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/cif.validate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.join_fragment_files.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.box_around_molecule.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/french_wilson.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/simple_map_coefficients.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/reflection_file_editor.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/cns.sdb_reader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/dano_as_amplitudes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/crystal_symmetry_from_any.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/reflection_file_reader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_get_citation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/shelx.dump_as_python.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/shelx.as_xray_structure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.superpose_centers_of_mass.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_add_conformations.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.as_xray_structure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/phil.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/reflection_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.print_sequence.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/mtrix_reconstruction.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_as_fasta.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/export_scalepack_unmerged.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.hierarchy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.superpose_atoms_by_name.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/flip_symmetric_amino_acids.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/distance_least_squares.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/get_pubmed_citation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/build_phil_cache.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_remediator.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/biomt_reconstruction.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/file_reader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/poscar_as_xray_structure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/sort_atoms.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_labels_diff.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/detector_image_as_png.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_show_connectivity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/cif_as_pdb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/explore_metric_symmetry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/merging_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/effective_resolution.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/dtrek.to_cns.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/r_free_flags_as_cns.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/symmetry_search.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/r_free_flags_accumulation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/emma.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/lattice_symmetry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/csv_as_mtz.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.link_as_geometry_restraints_edits.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/cif.as_miller_arrays.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/r_free_flags_completion_simple.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.insert_scale_records.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_labels_comparison.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_split_models.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_as_cif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/show_systematic_absences.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/mtz_as_cif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/blast_pdb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/cif.as_xray_structure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/cns_as_mtz.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/unique_with_biomt.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/patterson_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof copying /<>/.pybuild/cpython3_3.12/build/iotbx/fullprof/write_pcr.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof copying /<>/.pybuild/cpython3_3.12/build/iotbx/fullprof/read_pcr.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof copying /<>/.pybuild/cpython3_3.12/build/iotbx/fullprof/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof copying /<>/.pybuild/cpython3_3.12/build/iotbx/builders.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/wildcard.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dsn6 copying /<>/.pybuild/cpython3_3.12/build/iotbx/dsn6/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dsn6 copying /<>/.pybuild/cpython3_3.12/build/iotbx/dsn6/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dsn6 creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor copying /<>/.pybuild/cpython3_3.12/build/iotbx/xplor/map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor copying /<>/.pybuild/cpython3_3.12/build/iotbx/xplor/tst_xplormap.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor copying /<>/.pybuild/cpython3_3.12/build/iotbx/xplor/ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor copying /<>/.pybuild/cpython3_3.12/build/iotbx/xplor/crystal_symmetry_from_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor copying /<>/.pybuild/cpython3_3.12/build/iotbx/xplor/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor copying /<>/.pybuild/cpython3_3.12/build/iotbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/libtbx_refresh.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /<>/.pybuild/cpython3_3.12/build/iotbx/xds/geometry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /<>/.pybuild/cpython3_3.12/build/iotbx/xds/xds_cbf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /<>/.pybuild/cpython3_3.12/build/iotbx/xds/crystal_symmetry_from_hkl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /<>/.pybuild/cpython3_3.12/build/iotbx/xds/integrate_hkl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /<>/.pybuild/cpython3_3.12/build/iotbx/xds/blank_cbf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /<>/.pybuild/cpython3_3.12/build/iotbx/xds/xds_inp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /<>/.pybuild/cpython3_3.12/build/iotbx/xds/correction.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /<>/.pybuild/cpython3_3.12/build/iotbx/xds/read_ascii.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /<>/.pybuild/cpython3_3.12/build/iotbx/xds/spot_xds.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /<>/.pybuild/cpython3_3.12/build/iotbx/xds/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /<>/.pybuild/cpython3_3.12/build/iotbx/xds/xparm.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /<>/.pybuild/cpython3_3.12/build/iotbx/xds/gain_cbf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /<>/.pybuild/cpython3_3.12/build/iotbx/reflection_file_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/map_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /<>/.pybuild/cpython3_3.12/build/iotbx/cns/crystal_symmetry_from_sdb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /<>/.pybuild/cpython3_3.12/build/iotbx/cns/space_group_symbols.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /<>/.pybuild/cpython3_3.12/build/iotbx/cns/xray_structure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /<>/.pybuild/cpython3_3.12/build/iotbx/cns/sdb_writer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /<>/.pybuild/cpython3_3.12/build/iotbx/cns/pdb_remarks.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /<>/.pybuild/cpython3_3.12/build/iotbx/cns/miller_array.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /<>/.pybuild/cpython3_3.12/build/iotbx/cns/reflection_reader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /<>/.pybuild/cpython3_3.12/build/iotbx/cns/crystal_symmetry_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /<>/.pybuild/cpython3_3.12/build/iotbx/cns/sdb_reader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /<>/.pybuild/cpython3_3.12/build/iotbx/cns/crystal_symmetry_from_inp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /<>/.pybuild/cpython3_3.12/build/iotbx/cns/tst_cns.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /<>/.pybuild/cpython3_3.12/build/iotbx/cns/index_fobs_sigma_reader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /<>/.pybuild/cpython3_3.12/build/iotbx/cns/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /<>/.pybuild/cpython3_3.12/build/iotbx/extract_xtal_data.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/mtrix_biomt.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /<>/.pybuild/cpython3_3.12/build/iotbx/shelx/tst_lex_parse_build.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /<>/.pybuild/cpython3_3.12/build/iotbx/shelx/crystal_symmetry_from_ins.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /<>/.pybuild/cpython3_3.12/build/iotbx/shelx/errors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /<>/.pybuild/cpython3_3.12/build/iotbx/shelx/tokens.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /<>/.pybuild/cpython3_3.12/build/iotbx/shelx/tst_hklf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /<>/.pybuild/cpython3_3.12/build/iotbx/shelx/lexer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /<>/.pybuild/cpython3_3.12/build/iotbx/shelx/writer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /<>/.pybuild/cpython3_3.12/build/iotbx/shelx/write_ins.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /<>/.pybuild/cpython3_3.12/build/iotbx/shelx/parsers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /<>/.pybuild/cpython3_3.12/build/iotbx/shelx/tst_fvar_encoding.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /<>/.pybuild/cpython3_3.12/build/iotbx/shelx/hklf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /<>/.pybuild/cpython3_3.12/build/iotbx/shelx/tst_writer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /<>/.pybuild/cpython3_3.12/build/iotbx/shelx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /<>/.pybuild/cpython3_3.12/build/iotbx/shelx/fvar_encoding.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /<>/.pybuild/cpython3_3.12/build/iotbx/shelx/fcf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /<>/.pybuild/cpython3_3.12/build/cctbx_eltbx_attenuation_coefficient_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_bulk_solvent_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_secondary_structure_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_utils_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_eltbx_sasaki_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/boost_optional_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_hydrogens_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/rstbx_simulation_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/fable_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_program_template.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/pyframe.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_dlite.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_path.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_easy_mp_multicore.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/xmlrpc_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/cli.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/code_analysis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/subprocess_with_fixes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/start_print_trace.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/easy_pickle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/math_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/objgraph.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/dlite.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx copying /<>/.pybuild/cpython3_3.12/build/libtbx/sphinx/phil.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx copying /<>/.pybuild/cpython3_3.12/build/libtbx/sphinx/python_string.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx copying /<>/.pybuild/cpython3_3.12/build/libtbx/sphinx/pubmed.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx copying /<>/.pybuild/cpython3_3.12/build/libtbx/sphinx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling/mp_handler.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling/file_queue.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling/thread_handler.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling/result.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling/cluster_handler.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling/shared_resource.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling/stacktrace.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling/process_pool.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling/socket_queue.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling/mainthread.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling/philgen.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling/job_scheduler.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling/parallel_for.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /<>/.pybuild/cpython3_3.12/build/libtbx/easy_mp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_representation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/citations.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /<>/.pybuild/cpython3_3.12/build/libtbx/bundle/copy_all.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /<>/.pybuild/cpython3_3.12/build/libtbx/bundle/copy_build_libtbx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /<>/.pybuild/cpython3_3.12/build/libtbx/bundle/install_bat.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /<>/.pybuild/cpython3_3.12/build/libtbx/bundle/install_csh.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /<>/.pybuild/cpython3_3.12/build/libtbx/bundle/copy_runtime_sources.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /<>/.pybuild/cpython3_3.12/build/libtbx/bundle/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /<>/.pybuild/cpython3_3.12/build/libtbx/bundle/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /<>/.pybuild/cpython3_3.12/build/libtbx/run_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/object_oriented_patterns.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_citations.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/topological_sort.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/scheduling_helpers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/lsf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/remote.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/polling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/transfer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/errors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/util.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/status.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/submission.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/pbs_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/scheduling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/looping.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/communication.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/generic.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/sge_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/simplexml.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/clusterTests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/log.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development copying /<>/.pybuild/cpython3_3.12/build/libtbx/development/except_Exception.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development copying /<>/.pybuild/cpython3_3.12/build/libtbx/development/xcode_build_phase.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development copying /<>/.pybuild/cpython3_3.12/build/libtbx/development/timers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development copying /<>/.pybuild/cpython3_3.12/build/libtbx/development/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/program_utils/result.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/program_utils/statistics_info.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/program_utils/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_binary_search.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/program_template.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/str_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/subversion.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/version.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/path.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/pkg_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_scheduling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/wingide.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/xmlrpc_server_example.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/crossmingw.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/metric_prefixes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_thread_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/load_env.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_math_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/forward_compatibility.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/test_utils/parallel.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/test_utils/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/test_utils/pytest.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/configure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_xmlrpc_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/callbacks.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/complex_math.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/easy_profile.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_find_unused_imports.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /<>/.pybuild/cpython3_3.12/build/libtbx/server/FileServer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /<>/.pybuild/cpython3_3.12/build/libtbx/server/SocketServer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /<>/.pybuild/cpython3_3.12/build/libtbx/server/StartServer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /<>/.pybuild/cpython3_3.12/build/libtbx/server/FileClient.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /<>/.pybuild/cpython3_3.12/build/libtbx/server/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /<>/.pybuild/cpython3_3.12/build/libtbx/server/FileSocket.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_str_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/mpi4py.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_topological_sort.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /<>/.pybuild/cpython3_3.12/build/libtbx/phil/tst_experimental.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /<>/.pybuild/cpython3_3.12/build/libtbx/phil/tokenizer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /<>/.pybuild/cpython3_3.12/build/libtbx/phil/gui_objects.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /<>/.pybuild/cpython3_3.12/build/libtbx/phil/tst_tokenizer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /<>/.pybuild/cpython3_3.12/build/libtbx/phil/tst_interface.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /<>/.pybuild/cpython3_3.12/build/libtbx/phil/command_line.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /<>/.pybuild/cpython3_3.12/build/libtbx/phil/interface.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /<>/.pybuild/cpython3_3.12/build/libtbx/phil/parser.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /<>/.pybuild/cpython3_3.12/build/libtbx/phil/experimental.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /<>/.pybuild/cpython3_3.12/build/libtbx/phil/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /<>/.pybuild/cpython3_3.12/build/libtbx/phil/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /<>/.pybuild/cpython3_3.12/build/libtbx/assert_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/table_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/env_config.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/clear_paths.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/find_reference_cycles.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/option_parser.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/file_clutter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_python_code_parsing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/try_hello_world_c.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/pyplot.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/prime_factors_of.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/epydoc_run.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_build_path.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/install.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/check_libcpp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/start_binary_bundle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/help.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/dtrace.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_bin_path.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/create_install_script_bat.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/clean_clutter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/chunk.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/start_process.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_dist_paths.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/list_modules.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/find_files.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/assert_not_show_diff.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/sge_qstat_counts.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_env.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/sge_available_slots.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/install_conda.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/path_utility.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/py_compile_all.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/find_in_repositories.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_build_options.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/phil.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/make_sphinx_html.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_host_and_user.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/seconds_since_the_epoch.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/scons.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/printenv.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/raise_exception_for_testing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/git_avoid_merges.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_number_of_processors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_module_dependencies.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/import_all_ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/create_installer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/create_mac_app.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_pythonpath.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_include_paths.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/analyse_code_comments.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/add_from_future_import_division.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/list_source_files_sorted_by_size.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_lib_path.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/env_run.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/nequal.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/find_unused_imports_crude.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/find_reserved_names.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/list_files.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_commands.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/line_count.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_numpy_version.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/find_untested.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_full_command_path.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/create_unzipsfx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/remote_processing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_numeric_version.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/run_pickled_function.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_variable_names.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_all_on_path.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/create_selfx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/clear_paths.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/assert_line_count.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/make_dist.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/sphinx_build.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/import_all_python.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/run_tests_parallel.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/ipython_shell_start.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_environ_usage.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/assert_stdin.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/extract_code_from_txt.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/find_old_style_classes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/easy_qsub.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_but_no_repr.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_python_sys_executable.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/create_windows_exe.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/wait_for_file.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/parallel_simple.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/find_unused_imports.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/find_under_build.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/bootstrap.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/create_cctbx_bundle_for_installer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/assert_stdin_contains_strings.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/remove_tree.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/bundle_as_exe.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_repository_paths.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/find_clutter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_date_and_time.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/any2unix.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/assert_stdin_ends_with.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_python_dependencies.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/console_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/python_code_parsing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_easy_mp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/smart_open.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/binary_search.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/runtime_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_fully_buffered_timeout.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/cluster.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/libtbx_refresh.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_version.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/containers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_containers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_easy_mp_state.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_object_oriented_patterns.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/cpp_function_name.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_easy_pickle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/fastentrypoints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/easy_run.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/introspection.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/progress.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_mac_pkg.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/setup_installer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/rpath.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/install_distribution.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_windows_installer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/install_conda.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_installer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_mac_app.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/package_defs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/install_base_packages.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/write_gui_dispatcher_include.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_windows_exe.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/installer_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/regenerate_module_files.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/bootstrap.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_cctbx_bundle_for_installer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/plus_installer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/make_bundle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_runtime_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/thread_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx_geometry_asa_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_eltbx_icsd_radii_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_reduce_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_lbfgsb_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_maximum_clique_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/dxtbx_flumpy.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_linalg_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math/special_functions copying /<>/.pybuild/cpython3_3.12/build/cudatbx/math/special_functions/tst_spherical_bessel_jn.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math/special_functions copying /<>/.pybuild/cpython3_3.12/build/cudatbx/math/special_functions/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math/special_functions copying /<>/.pybuild/cpython3_3.12/build/cudatbx/math/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/cufft copying /<>/.pybuild/cpython3_3.12/build/cudatbx/cufft/tst_ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/cufft copying /<>/.pybuild/cpython3_3.12/build/cudatbx/cufft/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/cufft creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/scattering copying /<>/.pybuild/cpython3_3.12/build/cudatbx/scattering/tst_direct_summation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/scattering copying /<>/.pybuild/cpython3_3.12/build/cudatbx/scattering/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/scattering copying /<>/.pybuild/cpython3_3.12/build/mmtbx_geometry_shared_types_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/boost_tuple_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_sgtbx_asu_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_f_model_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_geometry_restraints_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_breadth_first_search_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/iotbx_xplor_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/iotbx_cif_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/iotbx_shelx_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/iotbx_pdb_hierarchy_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/rstbx_simage_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_glmtbx_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/rstbx_integration_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/gltbx_util_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_xray_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_eltbx_chemical_elements_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_cablam_align_utils_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/rstbx_diffraction_fastbragg_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/omptbx copying /<>/.pybuild/cpython3_3.12/build/omptbx/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/omptbx copying /<>/.pybuild/cpython3_3.12/build/omptbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/omptbx copying /<>/.pybuild/cpython3_3.12/build/spotfinder_dxtbx_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_r3_utils_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/qttbx copying /<>/.pybuild/cpython3_3.12/build/qttbx/phil.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/qttbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/viewers copying /<>/.pybuild/cpython3_3.12/build/qttbx/viewers/chimerax.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/viewers copying /<>/.pybuild/cpython3_3.12/build/qttbx/viewers/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/viewers copying /<>/.pybuild/cpython3_3.12/build/qttbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/qttbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity copying /<>/.pybuild/cpython3_3.12/build/prime/index_ambiguity/mod_lbfgs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity copying /<>/.pybuild/cpython3_3.12/build/prime/index_ambiguity/mod_kmeans.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity copying /<>/.pybuild/cpython3_3.12/build/prime/index_ambiguity/mod_indexing_ambiguity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity copying /<>/.pybuild/cpython3_3.12/build/prime/index_ambiguity/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_misc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_pdb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_threads.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_results.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_gui_dialogs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_lbfgs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_gui_frames.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_merge_data.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_util.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_mx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_input.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_leastsqr.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_run.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_lbfgs_partiality.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_perf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_partiality.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_outlier.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_plotter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/postrefine.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/plot_energy_spectrum.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/spot_param_visualizer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/viewstats.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/mpi_scale.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/change_basis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/run.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/r_mtz_mtz.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/plotstats.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/prime_gui.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/solve_indexing_ambiguity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/mpi_run.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/ray_trace.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/comparestats.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/view_fineslices.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/frame_extractor_by_scan.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/change_path_indexing_ambiguity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/print_integration_pickle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/cluster_isoform.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/explore_twin_operators.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/compare_solution_pickles.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/iotacc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/postrefine.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/isoform_cluster copying /<>/.pybuild/cpython3_3.12/build/prime/isoform_cluster/mod_isoform_cluster.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/isoform_cluster copying /<>/.pybuild/cpython3_3.12/build/prime/isoform_cluster/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/isoform_cluster copying /<>/.pybuild/cpython3_3.12/build/scitbx_stl_map_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_lstbx_normal_equations_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_cubicle_neighbors_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/nexus copying /<>/.pybuild/cpython3_3.12/build/dxtbx/nexus/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/nexus copying /<>/.pybuild/cpython3_3.12/build/dxtbx/CMakeLists.txt -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx/flumpy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking copying /<>/.pybuild/cpython3_3.12/build/dxtbx/masking/masking.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking copying /<>/.pybuild/cpython3_3.12/build/dxtbx/masking/SmarGonShadowMask.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking copying /<>/.pybuild/cpython3_3.12/build/dxtbx/masking/goniometer_shadow_masking.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking copying /<>/.pybuild/cpython3_3.12/build/dxtbx/masking/SConscript -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking copying /<>/.pybuild/cpython3_3.12/build/dxtbx/masking/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/masking/boost_python/ext.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/error.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx/imageset.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx/imageset.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFRayonixESRF.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNexusJungfrauExt.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5Sacla.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTC.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSER.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusSOLEILPX16MSN106.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI41.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatMultiImage.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerPhotonFactory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCmlfsom.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFullPilatusDLS6MSN126.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerDLS16MSN160.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniADSCHF4M.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNexus.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFCspad.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTCEpix.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuSaturnSN09040159.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigaku.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuSaturnSN11480296.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI7d.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuSaturnSN07400090.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFBruker.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMultiTileHierarchy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5SaclaRayonix.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatBrukerPhoton.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxDLS16M.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxEigerFilewriter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxDLSI19_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI31.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDESY6MSN115.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusCHESS_6MSN127.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFF.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNexusJungfrauHack.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN915.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatRAXISIVSpring8.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatROD.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatPYunspecified.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVHamamatsuSPring8BL32XU.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVNOIR.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatRAXIS.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXDS.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCDBG.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuA200SPring8BL26B1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatStill.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTCMultipleDetectors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFRayonix.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusHelpers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN928.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuA200.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTCCspad.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCNoDateStamp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVHamamatsu.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatBrukerFixedChi.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxEigerFilewriterESRFID232.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFullPilatusDLS300KSN104.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMini.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN445.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFRayonixXPP.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/Format.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxDLS.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerMaxIVBio.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxDLS16MI03.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEiger.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI71.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatMRC.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFull.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVJHSim.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatEDFALS733.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI51.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSNAPSID19.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatGatanDM4.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuPilatus.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5Lambda.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVTimePix_SU.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS12M.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatPYunspecifiedStill.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSC.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatus3APS19ID6MSN132.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatPilatusHelpers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatDIP2030b.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatBruker.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerPetraP14.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5EigerNearlyNexus.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatPYmultitile.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMV.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMultiTile.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatMarIP.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBF.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFullPilatus.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN457.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatMultiImageLazy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatPY.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVCMOS1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN126.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI61.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/nxmx_writer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN920.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/README.md -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5PAL.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuEiger.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxED.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN926.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN119.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTCRayonix.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFHelpers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5EigerNearlyNexusSPring8.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNexusTimepix2M.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/nexus.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuSaturnNoTS.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuSaturn.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusXXX.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/Registry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5SaclaMPCCD.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN905.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTCJungfrau.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerChessID7B2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI32.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114DMM.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN442.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatRAXISII.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/cbf_writer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFullPilatusDLS6MSN100.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatus.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFullByteOffset.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/image.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python/nexus_ext.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python/cbf_read_buffer.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python/image_ext.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python/cbf_read_buffer.cpp -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/image.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFRayonixSPring8.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_format_image_ext.pyi -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util copying /<>/.pybuild/cpython3_3.12/build/dxtbx/util/dlsnxs2cbf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util copying /<>/.pybuild/cpython3_3.12/build/dxtbx/util/rotate_and_average.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util copying /<>/.pybuild/cpython3_3.12/build/dxtbx/util/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize copying /<>/.pybuild/cpython3_3.12/build/dxtbx/serialize/imageset.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize copying /<>/.pybuild/cpython3_3.12/build/dxtbx/serialize/filename.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize copying /<>/.pybuild/cpython3_3.12/build/dxtbx/serialize/load.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize copying /<>/.pybuild/cpython3_3.12/build/dxtbx/serialize/xds.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize copying /<>/.pybuild/cpython3_3.12/build/dxtbx/serialize/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize copying /<>/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_ext.pyi -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx/version.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/example copying /<>/.pybuild/cpython3_3.12/build/dxtbx/example/to_xds.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/example copying /<>/.pybuild/cpython3_3.12/build/dxtbx/example/resolution_corners.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/example copying /<>/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_model_ext.pyi -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/model_helpers.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/compare.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/scan_helpers.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/ray_intersection.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/detector.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/detector_helpers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/scan.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/panel_data.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/spectrum.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/pixel_to_millimeter.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/goniometer.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/parallax_correction.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/detector_helpers_types.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/virtual_panel.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/kappa_goniometer.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/experiment.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/beam.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/goniometer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/crystal.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/multi_axis_goniometer.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/detector.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/scan.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/scan_helpers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/panel.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/profile.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/experiment_list.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/experiment_list.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/crystal.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/goniometer.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/panel.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/to_from_dict.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/multi_axis_goniometer.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/parallax_correction.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/detector.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/experiment.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/kappa_goniometer.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/pixel_to_millimeter.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/spectrum.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/pickle_suite.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/beam.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/scan.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/crystal.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/model_ext.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/scan_helpers.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/experiment_list.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/beam.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_masking_ext.pyi -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx/ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx/py.typed -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_imageset_ext.pyi -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/array_family copying /<>/.pybuild/cpython3_3.12/build/dxtbx/array_family/flex_table_suite.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/array_family copying /<>/.pybuild/cpython3_3.12/build/dxtbx/array_family/flex_table.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/array_family copying /<>/.pybuild/cpython3_3.12/build/dxtbx/array_family/ref_pickle_double_buffered.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/array_family copying /<>/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_format_nexus_ext.pyi -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/show_registry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/install_format.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/debug_memory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/depends_on.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/plot_detector_models.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/image_average.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/dlsnxs2cbf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/detector_superpose.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/saturation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/print_matching_images.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/show_matching_formats.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/image2pickle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/show_mask_info.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/overload.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/read_sequence.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/print_header.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/display_parallax_correction.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/radial_average.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/datablock.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_flumpy.pyi -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx/sequence_filenames.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx/filecache.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx/filecache_controller.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/boost_python/compression.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/boost_python/compression.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/boost_python/flumpy.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/boost_python/ext.cpp -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/boost_python/imageset_ext.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/boost_python creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs copying /<>/.pybuild/cpython3_3.12/build/dxtbx/data/beamline_defs/PILATUS_300K_S_N_3_0104_Diamond.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs copying /<>/.pybuild/cpython3_3.12/build/dxtbx/data/beamline_defs/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs copying /<>/.pybuild/cpython3_3.12/build/dxtbx/data/beamline_defs/PILATUS_2M_S_N_24_0107_Diamond.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs copying /<>/.pybuild/cpython3_3.12/build/dxtbx/data/detectors.lib -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data copying /<>/.pybuild/cpython3_3.12/build/dxtbx/data/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data copying /<>/.pybuild/cpython3_3.12/build/mmtbx_tls_optimise_amplitudes_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/generate_fonts_ucs_cpp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/gl_managed.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/wx_viewer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/generate_functions_bpl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/generate_defines_bpl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/fonts.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/run_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/wx_ellipsoids_test.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/wx_viewer_leapmotion.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/quadrics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/viewer_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/util.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/extract_opengl_specs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/gl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/tst_viewer_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/tst_ellipsoids.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/images.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/wx_motion_on_tab.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/command_line copying /<>/.pybuild/cpython3_3.12/build/gltbx/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/command_line copying /<>/.pybuild/cpython3_3.12/build/gltbx/command_line/try_imports.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/command_line copying /<>/.pybuild/cpython3_3.12/build/gltbx/wx_cube.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/glu.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/wx_scene.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/tst_fonts.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/libtbx_refresh.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/wx_viewers_images.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/wx_viewer_example.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx_tls_utils_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/spotfinder_hough_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_adp_restraints_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_rotamer_fit_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_ncs_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/iotbx_detectors_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/iotbx_wildcard_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /<>/.pybuild/cpython3_3.12/build/cootbx/hydrogens_button.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /<>/.pybuild/cpython3_3.12/build/cootbx/simple_zoom_list.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /<>/.pybuild/cpython3_3.12/build/cootbx/watch_file.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /<>/.pybuild/cpython3_3.12/build/cootbx/interactive_edit.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /<>/.pybuild/cpython3_3.12/build/cootbx/ligand_checklist.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /<>/.pybuild/cpython3_3.12/build/cootbx/validation_lists.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /<>/.pybuild/cpython3_3.12/build/cootbx/view_refinement.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /<>/.pybuild/cpython3_3.12/build/cootbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /<>/.pybuild/cpython3_3.12/build/cootbx/xmlrpc_server.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx_geometry_clash_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/gltbx_glu_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_lbfgs_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_rsr_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_ncs_cartesian_restraints_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/annlib_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_clustering_algorithm_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cbflib_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/gltbx_quadrics_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_minpack_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_suffixtree_single_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/outlier_spots copying /<>/.pybuild/cpython3_3.12/build/rstbx/outlier_spots/fit_distribution.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/outlier_spots copying /<>/.pybuild/cpython3_3.12/build/rstbx/outlier_spots/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/outlier_spots creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/detectors copying /<>/.pybuild/cpython3_3.12/build/rstbx/detectors/silicon.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/detectors copying /<>/.pybuild/cpython3_3.12/build/rstbx/detectors/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/detectors creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx copying /<>/.pybuild/cpython3_3.12/build/rstbx/cftbx/tst_coordinate_frame_converter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx copying /<>/.pybuild/cpython3_3.12/build/rstbx/cftbx/coordinate_frame_converter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx copying /<>/.pybuild/cpython3_3.12/build/rstbx/cftbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx copying /<>/.pybuild/cpython3_3.12/build/rstbx/cftbx/coordinate_frame_helpers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx copying /<>/.pybuild/cpython3_3.12/build/rstbx/run_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/viewer/integration.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/viewer/results_base.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/viewer/calibration.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/viewer/spotfinder_frame.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/viewer/controls.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/viewer/frame.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/viewer/calibration_frame.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/viewer/processing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/viewer/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/viewer/drivers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/viewer/dataset.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/viewer/spotfinder_wrap.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/viewer/display.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/viewer/indexing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/viewer/pixels3d.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/viewer/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bandpass copying /<>/.pybuild/cpython3_3.12/build/rstbx/bandpass/simulated_annealing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bandpass copying /<>/.pybuild/cpython3_3.12/build/rstbx/bandpass/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bandpass creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /<>/.pybuild/cpython3_3.12/build/rstbx/new_horizons/spot_shape.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /<>/.pybuild/cpython3_3.12/build/rstbx/new_horizons/pixel_spread.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /<>/.pybuild/cpython3_3.12/build/rstbx/new_horizons/index.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /<>/.pybuild/cpython3_3.12/build/rstbx/new_horizons/stats_index.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /<>/.pybuild/cpython3_3.12/build/rstbx/new_horizons/oscillation_shots.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /<>/.pybuild/cpython3_3.12/build/rstbx/new_horizons/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /<>/.pybuild/cpython3_3.12/build/rstbx/new_horizons/speckfinder.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dials_core copying /<>/.pybuild/cpython3_3.12/build/rstbx/dials_core/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dials_core copying /<>/.pybuild/cpython3_3.12/build/rstbx/dials_core/integration_core.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dials_core creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/uc_frame.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/ring_frame.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/pyslip.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/frame.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/slip_viewer_image_factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/tile_generation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/calibration_frame.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/slip_display.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/example_frame_plugin_hidden.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/score_frame.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps copying /<>/.pybuild/cpython3_3.12/build/rstbx/apps/slip_helpers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps copying /<>/.pybuild/cpython3_3.12/build/rstbx/apps/dual_resolution_helpers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /<>/.pybuild/cpython3_3.12/build/rstbx/apps/stills/simple_integration.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /<>/.pybuild/cpython3_3.12/build/rstbx/apps/stills/deltapsi_refinement_preceding_integration.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /<>/.pybuild/cpython3_3.12/build/rstbx/apps/stills/dials_refinement_preceding_integration.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /<>/.pybuild/cpython3_3.12/build/rstbx/apps/stills/util.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /<>/.pybuild/cpython3_3.12/build/rstbx/apps/stills/stills_integration.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /<>/.pybuild/cpython3_3.12/build/rstbx/apps/stills/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /<>/.pybuild/cpython3_3.12/build/rstbx/apps/spot_markup.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps copying /<>/.pybuild/cpython3_3.12/build/rstbx/apps/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx/ersatz_misset.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx/uc1_2_positions_idx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx/uc1_2a.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx/compare_mosflm_xds.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx/uc1_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx/uc1_2_validate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model copying /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model/detector.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model copying /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model/tst_detector_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model copying /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model/instrument_specifics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model copying /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model copying /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx/uc1_2_positions.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /<>/.pybuild/cpython3_3.12/build/rstbx/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing copying /<>/.pybuild/cpython3_3.12/build/rstbx/indexing/tst_auto_monoscan.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing copying /<>/.pybuild/cpython3_3.12/build/rstbx/indexing/tst_dataset1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing copying /<>/.pybuild/cpython3_3.12/build/rstbx/indexing/do_index.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing copying /<>/.pybuild/cpython3_3.12/build/rstbx/indexing/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /<>/.pybuild/cpython3_3.12/build/rstbx/simage/run_spotfinder.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /<>/.pybuild/cpython3_3.12/build/rstbx/simage/wx_display.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /<>/.pybuild/cpython3_3.12/build/rstbx/simage/solver.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /<>/.pybuild/cpython3_3.12/build/rstbx/simage/integrate_crude.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /<>/.pybuild/cpython3_3.12/build/rstbx/simage/refine_uc_cr.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /<>/.pybuild/cpython3_3.12/build/rstbx/simage/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /<>/.pybuild/cpython3_3.12/build/rstbx/simage/create.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /<>/.pybuild/cpython3_3.12/build/rstbx/simage/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /<>/.pybuild/cpython3_3.12/build/rstbx/simage/run_labelit_index.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /<>/.pybuild/cpython3_3.12/build/rstbx/simage/explore_completeness.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support copying /<>/.pybuild/cpython3_3.12/build/rstbx/sublattice_support/change_basis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support copying /<>/.pybuild/cpython3_3.12/build/rstbx/sublattice_support/tst_sublattice.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support copying /<>/.pybuild/cpython3_3.12/build/rstbx/sublattice_support/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil copying /<>/.pybuild/cpython3_3.12/build/rstbx/phil/phil_preferences.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil copying /<>/.pybuild/cpython3_3.12/build/rstbx/phil/preferences.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil copying /<>/.pybuild/cpython3_3.12/build/rstbx/phil/scope.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil copying /<>/.pybuild/cpython3_3.12/build/rstbx/phil/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /<>/.pybuild/cpython3_3.12/build/rstbx/indexing_api/force_cell.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /<>/.pybuild/cpython3_3.12/build/rstbx/indexing_api/nearest_neighbor.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /<>/.pybuild/cpython3_3.12/build/rstbx/indexing_api/outlier_detection.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /<>/.pybuild/cpython3_3.12/build/rstbx/indexing_api/outlier_procedure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /<>/.pybuild/cpython3_3.12/build/rstbx/indexing_api/test_dps.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /<>/.pybuild/cpython3_3.12/build/rstbx/indexing_api/sampling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /<>/.pybuild/cpython3_3.12/build/rstbx/indexing_api/tools.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /<>/.pybuild/cpython3_3.12/build/rstbx/indexing_api/lattice.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /<>/.pybuild/cpython3_3.12/build/rstbx/indexing_api/basis_choice.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /<>/.pybuild/cpython3_3.12/build/rstbx/indexing_api/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/array_family copying /<>/.pybuild/cpython3_3.12/build/rstbx/array_family/flex.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/array_family copying /<>/.pybuild/cpython3_3.12/build/rstbx/array_family/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/array_family creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /<>/.pybuild/cpython3_3.12/build/rstbx/dps_core/cell_assessment.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /<>/.pybuild/cpython3_3.12/build/rstbx/dps_core/zuoreduction.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /<>/.pybuild/cpython3_3.12/build/rstbx/dps_core/constrainment.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /<>/.pybuild/cpython3_3.12/build/rstbx/dps_core/sampling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /<>/.pybuild/cpython3_3.12/build/rstbx/dps_core/lepage.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /<>/.pybuild/cpython3_3.12/build/rstbx/dps_core/basis_choice.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /<>/.pybuild/cpython3_3.12/build/rstbx/dps_core/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /<>/.pybuild/cpython3_3.12/build/rstbx/dps_core/tst_iotbx_converter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /<>/.pybuild/cpython3_3.12/build/rstbx/command_line/simage.explore_completeness.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /<>/.pybuild/cpython3_3.12/build/rstbx/command_line/index.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /<>/.pybuild/cpython3_3.12/build/rstbx/command_line/simage.solver.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /<>/.pybuild/cpython3_3.12/build/rstbx/command_line/viewer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /<>/.pybuild/cpython3_3.12/build/rstbx/command_line/example_viewer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /<>/.pybuild/cpython3_3.12/build/rstbx/command_line/slip_viewer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /<>/.pybuild/cpython3_3.12/build/rstbx/command_line/simage.create.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /<>/.pybuild/cpython3_3.12/build/rstbx/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /<>/.pybuild/cpython3_3.12/build/rstbx/command_line/simage.wx_display.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction copying /<>/.pybuild/cpython3_3.12/build/rstbx/diffraction/tst_ewald_sphere.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg copying /<>/.pybuild/cpython3_3.12/build/rstbx/diffraction/fastbragg/tst_utils_clustering.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg copying /<>/.pybuild/cpython3_3.12/build/rstbx/diffraction/fastbragg/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg copying /<>/.pybuild/cpython3_3.12/build/rstbx/diffraction/fastbragg/tst_bragg_minimal.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg copying /<>/.pybuild/cpython3_3.12/build/rstbx/diffraction/tst_predict.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction copying /<>/.pybuild/cpython3_3.12/build/rstbx/diffraction/tst_partial_derivatives.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction copying /<>/.pybuild/cpython3_3.12/build/rstbx/diffraction/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction copying /<>/.pybuild/cpython3_3.12/build/rstbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation copying /<>/.pybuild/cpython3_3.12/build/rstbx/simulation/constants.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation copying /<>/.pybuild/cpython3_3.12/build/rstbx/simulation/sim_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation copying /<>/.pybuild/cpython3_3.12/build/rstbx/simulation/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation copying /<>/.pybuild/cpython3_3.12/build/rstbx/simulation/sim_pdf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation copying /<>/.pybuild/cpython3_3.12/build/rstbx/simulation/tst_xfel1_simple.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry copying /<>/.pybuild/cpython3_3.12/build/rstbx/symmetry/subgroup.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints copying /<>/.pybuild/cpython3_3.12/build/rstbx/symmetry/constraints/g_gradients.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints copying /<>/.pybuild/cpython3_3.12/build/rstbx/symmetry/constraints/parameter_reduction.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints copying /<>/.pybuild/cpython3_3.12/build/rstbx/symmetry/constraints/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints copying /<>/.pybuild/cpython3_3.12/build/rstbx/symmetry/sgtbx_adaptor.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry copying /<>/.pybuild/cpython3_3.12/build/rstbx/symmetry/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation copying /<>/.pybuild/cpython3_3.12/build/serialtbx/mono_simulation/max_like.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation copying /<>/.pybuild/cpython3_3.12/build/serialtbx/mono_simulation/util.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation copying /<>/.pybuild/cpython3_3.12/build/serialtbx/mono_simulation/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector copying /<>/.pybuild/cpython3_3.12/build/serialtbx/detector/jungfrau.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector copying /<>/.pybuild/cpython3_3.12/build/serialtbx/detector/rayonix.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector copying /<>/.pybuild/cpython3_3.12/build/serialtbx/detector/xtc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector copying /<>/.pybuild/cpython3_3.12/build/serialtbx/detector/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology copying /<>/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology/metrology.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology copying /<>/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology/generic_detector.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology copying /<>/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology copying /<>/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology/cspad_detector.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology copying /<>/.pybuild/cpython3_3.12/build/serialtbx/detector/cspad.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector creating /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util copying /<>/.pybuild/cpython3_3.12/build/serialtbx/util/time.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util copying /<>/.pybuild/cpython3_3.12/build/serialtbx/util/construct_frame.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util copying /<>/.pybuild/cpython3_3.12/build/serialtbx/util/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util copying /<>/.pybuild/cpython3_3.12/build/serialtbx/util/energy_scan_notch_finder.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util copying /<>/.pybuild/cpython3_3.12/build/serialtbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx copying /<>/.pybuild/cpython3_3.12/build/cctbx_eltbx_fp_fdp_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/rstbx_bpcx_detector_model_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_miller_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/structure_factors/direct/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/structure_factors/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/stl/map.py to map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/stl/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/conftest.py to conftest.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests/tst_ab_initio_ext.py to tst_ab_initio_ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests/tst_charge_flipping.py to tst_charge_flipping.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/charge_flipping.py to charge_flipping.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression/tst_commandline_refine.py to tst_commandline_refine.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression/tst_commandline_anomrefine.py to tst_commandline_anomrefine.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression/test_data/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/absolute_structure/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/development.py to development.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/source_generators/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/least_squares.py to least_squares.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical/all.py to all.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical/hydrogens.py to hydrogens.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/rigid.py to rigid.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/all.py to all.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/tst_reparametrisation.py to tst_reparametrisation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/test_same_group.py to test_same_group.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/tst_lbfgs.py to tst_lbfgs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/test_rigid.py to test_rigid.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/test_occupancies.py to test_occupancies.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/tst_constrained_structure.py to tst_constrained_structure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/test_disorder.py to test_disorder.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/test_direction.py to test_direction.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/site.py to site.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/adp.py to adp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/fpfdp.py to fpfdp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/occupancy.py to occupancy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/weighting_schemes.py to weighting_schemes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints/origin_fixing_restraints.py to origin_fixing_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints/adp_restraints.py to adp_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/masks/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/refine.py to refine.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/absolute_structure.py to absolute_structure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/masks.py to masks.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/benchmark_refinement.py to benchmark_refinement.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/anom_refine.py to anom_refine.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/preset_buttons.py to preset_buttons.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/webbrowser_messenger_py3.py to webbrowser_messenger_py3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/HKLviewer.py to HKLviewer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/cmdlineframes.py to cmdlineframes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/jsview_3d.py to jsview_3d.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/default_user_preset_buttons.py to default_user_preset_buttons.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/helpers.py to helpers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/xtriage_runner.py to xtriage_runner.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/xtricorder_runner.py to xtricorder_runner.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/webbrowser_messenger_py2.py to webbrowser_messenger_py2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/qt.py to qt.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/hklview_frame.py to hklview_frame.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/qt_chromium_check.py to qt_chromium_check.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/display2.py to display2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/hklviewer_gui.py to hklviewer_gui.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/chimeraX_wheel_src/tool.py to tool.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/chimeraX_wheel_src/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_websocket.py to tst_websocket.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py to tst_HKLviewerQtGuiSliceK-9.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tests_HKLviewer.py to tests_HKLviewer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py to tst_HKLviewerQtGuiBinFSigF.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_hklinfo.py to tst_hklinfo.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py to tst_HKLviewerOSbrowserBinFSigF.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py to tst_HKLviewerOSbrowserSliceK-9.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/programs/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/programs/HKLinfo.py to HKLinfo.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview/view_3d.py to view_3d.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview/view_2d.py to view_2d.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview/comparison.py to comparison.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview/frames.py to frames.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/hklview.py to hklview.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/HKLviewer.py to HKLviewer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/model_viewer.py to model_viewer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/visualize_r_factors.py to visualize_r_factors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/make_install_HKLviewer_ChimeraX.py to make_install_HKLviewer_ChimeraX.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/multiplicity_viewer.py to multiplicity_viewer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/qttbx.view_structure.py to qttbx.view_structure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/compare_datasets.py to compare_datasets.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/HKLinfo.py to HKLinfo.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx/xray_structure_viewer.py to xray_structure_viewer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx/map_viewer.py to map_viewer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/run_tests.py to run_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_18_doc_programming_tips_2.py to tst_18_doc_programming_tips_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_py_from_html.py to tst_py_from_html.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py to tst_6_doc_hlo_model_map_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_10_doc_programming_tips_1.py to tst_10_doc_programming_tips_1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_19_doc_programming_tips_3.py to tst_19_doc_programming_tips_3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_13_script_ideal_ss.py to tst_13_script_ideal_ss.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_14_script_lbfgs_no_curvature.py to tst_14_script_lbfgs_no_curvature.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_2_doc_hlo_intro.py to tst_2_doc_hlo_intro.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_12_script_compare_ss.py to tst_12_script_compare_ss.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_16_script_lbfgs_with_curvature.py to tst_16_script_lbfgs_with_curvature.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_4_doc_hlo_data_manager.py to tst_4_doc_hlo_data_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_1_template.py to tst_1_template.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_5_doc_hlo_map_manager.py to tst_5_doc_hlo_map_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_3_doc_hlo_model_manager.py to tst_3_doc_hlo_model_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_8_doc_maps_intro.py to tst_8_doc_maps_intro.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_11_script_1.py to tst_11_script_1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/exercise.py to exercise.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_17_script_rfactors.py to tst_17_script_rfactors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_15_doc_models_hierarchy.py to tst_15_doc_models_hierarchy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_7_doc_low_flex_advanced.py to tst_7_doc_low_flex_advanced.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_9_doc_maps_boxing.py to tst_9_doc_maps_boxing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/command_line/extract_script_from_html_cctbx_doc.py to extract_script_from_html_cctbx_doc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/copy_files.py to copy_files.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/command_line/dump.py to dump.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/exercise_compression.py to exercise_compression.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fast_linalg/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/small_cell.py to small_cell.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/powder_util.py to powder_util.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/small_cell_index.py to small_cell_index.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/xfel_small_cell_process.py to xfel_small_cell_process.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/cake_plot.py to cake_plot.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/cake_plot_prep.py to cake_plot_prep.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/candidate_cells.py to candidate_cells.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/small_cell_process.py to small_cell_process.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/powder_from_spots.py to powder_from_spots.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/solve_orientation.py to solve_orientation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/write_orientation_arrows.py to write_orientation_arrows.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation/mono_treatment.py to mono_treatment.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation/max_like_pos_neg.py to max_like_pos_neg.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_calib.py to mpi_fxs_calib.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/pnccd_tbx.py to pnccd_tbx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/fxs.py to fxs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/pnccd_hit.py to pnccd_hit.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_index.py to mpi_fxs_index.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_mask.py to mpi_fxs_mask.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_c2.py to mpi_fxs_c2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_bg.py to mpi_fxs_bg.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_launch.py to mpi_fxs_launch.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/phil_patch.py to phil_patch.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/run_stats_plotter.py to run_stats_plotter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/xfel_gui_plotter.py to xfel_gui_plotter.cpython-312.pyc /usr/lib/python3.12/dist-packages/xfel/ui/components/xfel_gui_plotter.py:393: SyntaxWarning: invalid escape sequence '\A' /usr/lib/python3.12/dist-packages/xfel/ui/components/xfel_gui_plotter.py:395: SyntaxWarning: invalid escape sequence '\A' /usr/lib/python3.12/dist-packages/xfel/ui/components/xfel_gui_plotter.py:397: SyntaxWarning: invalid escape sequence '\A' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/spotfinder_plotter.py to spotfinder_plotter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/submission_tracker.py to submission_tracker.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/spotfinder_scraper.py to spotfinder_scraper.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/xfel_gui_controls.py to xfel_gui_controls.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/timeit.py to timeit.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/xfel_gui_init.py to xfel_gui_init.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/xfel_gui_dialogs.py to xfel_gui_dialogs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/tooltips.py to tooltips.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_run_stats_in_gui.py to plot_run_stats_in_gui.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/ui_server.py to ui_server.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_reflection_stats.py to plot_reflection_stats.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_run_stats.py to plot_run_stats.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_run_stats_from_experiments.py to plot_run_stats_from_experiments.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_isoform_cloud.py to plot_isoform_cloud.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/print_run_stats.py to print_run_stats.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_uc_cloud.py to plot_uc_cloud.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_uc_cloud_from_experiments.py to plot_uc_cloud_from_experiments.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/xfel_gui_launch.py to xfel_gui_launch.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/get_hit_timestamps.py to get_hit_timestamps.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_spotfinder_stats_in_gui.py to plot_spotfinder_stats_in_gui.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/experiment.py to experiment.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/trial.py to trial.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/tag.py to tag.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/frame_logging.py to frame_logging.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/run.py to run.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/job.py to job.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/merging_log_scraper.py to merging_log_scraper.cpython-312.pyc /usr/lib/python3.12/dist-packages/xfel/ui/db/merging_log_scraper.py:106: SyntaxWarning: invalid escape sequence '\A' /usr/lib/python3.12/dist-packages/xfel/ui/db/merging_log_scraper.py:189: SyntaxWarning: invalid escape sequence '\A' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/task.py to task.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/dxtbx_db.py to dxtbx_db.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/dataset.py to dataset.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/rungroup.py to rungroup.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/cfgs/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/cfgs/shifter_templates.py to shifter_templates.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/stats.py to stats.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/xfel_db.py to xfel_db.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector/metrology2phil.py to metrology2phil.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector/cspad_cbf_tbx.py to cspad_cbf_tbx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/correction_vector_plot.py to correction_vector_plot.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cxi_cc.py to cxi_cc.cpython-312.pyc /usr/lib/python3.12/dist-packages/xfel/cxi/cxi_cc.py:132: SyntaxWarning: invalid escape sequence '\d' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/postrefinement_factory.py to postrefinement_factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/integrate_image_api.py to integrate_image_api.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_hdf5.py to mod_hdf5.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_ledge.py to mod_ledge.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_dump.py to mod_dump.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_daq_status.py to mod_daq_status.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/average_tbx.py to average_tbx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/common_mode.py to common_mode.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_average.py to mod_average.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/parse_calib.py to parse_calib.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/pixel_histograms.py to pixel_histograms.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_illumination_filter.py to mod_illumination_filter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/histogram_finalise.py to histogram_finalise.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_radial_average.py to mod_radial_average.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_view.py to mod_view.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/display_calib.py to display_calib.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_event_code.py to mod_event_code.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/xes_histograms.py to xes_histograms.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_event_info.py to mod_event_info.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_filter.py to mod_filter.cpython-312.pyc /usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_filter.py:52: SyntaxWarning: invalid escape sequence '\d' /usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_filter.py:53: SyntaxWarning: invalid escape sequence '\d' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_xes.py to mod_xes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/xes_finalise.py to xes_finalise.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_image_dict.py to mod_image_dict.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_hitfind.py to mod_hitfind.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter.py to mod_spectrum_filter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/hitfinder_tbx.py to hitfinder_tbx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/cspad_tbx.py to cspad_tbx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/xes_faster_histograms.py to xes_faster_histograms.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_dump_bitmap.py to mod_dump_bitmap.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py to mod_spectrum_filter_v2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_param.py to mod_param.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py to mod_onecolor_spectrum_filter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/rayonix_tbx.py to rayonix_tbx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py to mod_spectrum_filter_remote_only.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_mar.py to mod_mar.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_pulnix_dump.py to mod_pulnix_dump.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/completeness_plot.py to completeness_plot.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering/test_cluster.py to test_cluster.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering/Cluster.py to Cluster.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering/SingleFrame.py to SingleFrame.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/trumpet_plot.py to trumpet_plot.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/spectra_filter.py to spectra_filter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/display_powder_arcs.py to display_powder_arcs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/util.py to util.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx/status_plot.py to status_plot.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx/wx_detectors.py to wx_detectors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx/trials_plot.py to trials_plot.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/display_spots.py to display_spots.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/strong_zulu.py to strong_zulu.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/postrefinement_legacy_rs.py to postrefinement_legacy_rs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/command_line/einsle.py to einsle.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/data_utils.py to data_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/merging_utils.py to merging_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/average_spots.py to average_spots.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/postrefinement_hybrid_rs.py to postrefinement_hybrid_rs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/postrefinement_updated_rs.py to postrefinement_updated_rs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/split_detector.py to split_detector.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/image_pickle_locator.py to image_pickle_locator.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/mp.py to mp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/dials_pickle_reader.py to dials_pickle_reader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/weather.py to weather.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/cctbx_xfel_installer.py to cctbx_xfel_installer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/drift.py to drift.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/dials_file_matcher.py to dials_file_matcher.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/show_spot_separation.py to show_spot_separation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/kapton_2019_correction_frame_frame_plugin.py to kapton_2019_correction_frame_frame_plugin.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/reflection_length.py to reflection_length.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel/agipd_cxigeom2nexus.py to agipd_cxigeom2nexus.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel/agipd_from_defs.py to agipd_from_defs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel/write_composite_image.py to write_composite_image.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel/read_geom.py to read_geom.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/simulate_partial_data.py to simulate_partial_data.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/cluster_groups.py to cluster_groups.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/api.py to api.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/cluster_unit_cell.py to cluster_unit_cell.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/cluster_intensity_statistics.py to cluster_intensity_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/cluster_per_frame_wilson.py to cluster_per_frame_wilson.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/cluster_42.py to cluster_42.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/cluster_visualise_orientations.py to cluster_visualise_orientations.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/cluster.py to cluster.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/singleframe.py to singleframe.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc/components.py to components.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc/parameter_optimizer.py to parameter_optimizer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc/multiproc_temp_parame_opt.py to multiproc_temp_parame_opt.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc/graph.py to graph.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/pal/jf4m_geom2nexus.py to jf4m_geom2nexus.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/pal/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos/fit_3_gaussian.py to fit_3_gaussian.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos/test_3_gaussian.py to test_3_gaussian.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api/exercise_api.py to exercise_api.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api/psana_cctbx.py to psana_cctbx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/refine.py to refine.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/absorption.py to absorption.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate/factory.py to factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate/integrate.py to integrate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input/file_lister.py to file_lister.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input/file_loader.py to file_loader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input/file_load_calculator.py to file_load_calculator.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input/factory.py to factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/output/factory.py to factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/output/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale/experiment_scaler.py to experiment_scaler.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale/factory.py to factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/worker.py to worker.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata/cell_listing.py to cell_listing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata/factory.py to factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/reflection_table_utils.py to reflection_table_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter/factory.py to factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter/reflection_filter.py to reflection_filter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter/experiment_filter.py to experiment_filter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils/memory_usage.py to memory_usage.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils/data_counter.py to data_counter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model/factory.py to factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model/crystal_model.py to crystal_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model/resolution_binner.py to resolution_binner.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/validation/application.py to application.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/validation/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group/group_reflections.py to group_reflections.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group/factory.py to factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/phil/phil.py to phil.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/phil/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine/postrefinement_rs.py to postrefinement_rs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine/factory.py to factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine/postrefinement_rs2.py to postrefinement_rs2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus/lunus.py to lunus.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus/factory.py to factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge/merger.py to merger.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge/factory.py to factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/mpi_helper.py to mpi_helper.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_sr.py to error_modifier_sr.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_ha14.py to error_modifier_ha14.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/factory.py to factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_ev11.py to error_modifier_ev11.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/mpi_logger.py to mpi_logger.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/compare_results.py to compare_results.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/cosym_tranch_align.py to cosym_tranch_align.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/reindex_cosym.py to reindex_cosym.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/factory.py to factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/token_passing_left_right.py to token_passing_left_right.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/reindex_to_abc.py to reindex_to_abc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/cosym.py to cosym.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/df_cosym.py to df_cosym.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/reindex_to_reference.py to reindex_to_reference.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/polarization.py to polarization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/aux_cosym.py to aux_cosym.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance/factory.py to factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance/load_balancer.py to load_balancer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/intensity_resolution_statistics.py to intensity_resolution_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py to intensity_resolution_statistics_cxi.cpython-312.pyc /usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py:350: SyntaxWarning: invalid escape sequence '\d' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/factory.py to factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/intensity_histogram.py to intensity_histogram.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/experiment_resolution_statistics.py to experiment_resolution_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/beam_statistics.py to beam_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/unit_cell_statistics.py to unit_cell_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/phil_validation.py to phil_validation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database/merging_database.py to merging_database.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database/merging_database_flex.py to merging_database_flex.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database/merging_database_fs.py to merging_database_fs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database/merging_database_sqlite3.py to merging_database_sqlite3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/general_fcalc.py to general_fcalc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/model/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/postrefine/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/error_modeler_base.py to error_modeler_base.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/sdfac_propagate.py to sdfac_propagate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/errors_from_residuals.py to errors_from_residuals.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine.py to sdfac_refine.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine_levmar.py to sdfac_refine_levmar.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine_lbfgs.py to sdfac_refine_lbfgs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/reduced_chi_squared.py to reduced_chi_squared.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/sdfac_propagate_and_refine.py to sdfac_propagate_and_refine.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/statistics/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/predictions_to_edges.py to predictions_to_edges.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/graphs/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/tables/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line/merge.py to merge.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line/mpi_integrate.py to mpi_integrate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/simulate.py to simulate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/progress_utils.py to progress_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/isoform.py to isoform.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/split_pickles.py to split_pickles.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/progress_support.py to progress_support.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_detector_statistics.py to cspad_detector_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_pbs.py to cxi_pbs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/convert_gain_map.py to convert_gain_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_index.py to cxi_index.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/view_pixel_histograms.py to view_pixel_histograms.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_pickle2cbf.py to cxi_pickle2cbf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xpp_progress_detail.py to xpp_progress_detail.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_lsf.py to cxi_lsf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/fee_calibration.py to fee_calibration.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xpp_progress_bar.py to xpp_progress_bar.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/experiment_manager.py to experiment_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/make_mask.py to make_mask.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_merge.py to cxi_merge.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xtc_process.py to xtc_process.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/trumpet_plots.py to trumpet_plots.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xfel_process.py to xfel_process.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/find_highres_shots.py to find_highres_shots.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/fee_view.py to fee_view.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_slaccalib2cbfheader.py to cxi_slaccalib2cbfheader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/mpi_average.py to mpi_average.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cctbx_integration_pickle_viewer.py to cctbx_integration_pickle_viewer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/convert_gain_map_cbf.py to convert_gain_map_cbf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/metrology.py to metrology.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_cbfheader2slaccalib.py to cxi_cbfheader2slaccalib.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xtc_dump.py to xtc_dump.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/riso.py to riso.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_parameters.py to cxi_parameters.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/filter_experiments_by_rmsd.py to filter_experiments_by_rmsd.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/quadrants.py to quadrants.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/histogram_finalise.py to histogram_finalise.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xpp_isoform.py to xpp_isoform.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/smooth_spectrum.py to smooth_spectrum.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/print_pickle.py to print_pickle.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/or_mask.py to or_mask.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_display_metrology.py to cxi_display_metrology.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_stream_to_pickle.py to cxi_stream_to_pickle.cpython-312.pyc /usr/lib/python3.12/dist-packages/xfel/command_line/cxi_stream_to_pickle.py:23: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/xfel/command_line/cxi_stream_to_pickle.py:24: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/xfel/command_line/cxi_stream_to_pickle.py:33: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/xfel/command_line/cxi_stream_to_pickle.py:41: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/xfel/command_line/cxi_stream_to_pickle.py:42: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/xfel/command_line/cxi_stream_to_pickle.py:45: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/xfel/command_line/cxi_stream_to_pickle.py:48: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/xfel/command_line/cxi_stream_to_pickle.py:51: SyntaxWarning: invalid escape sequence '\s' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/stills_merge.py to stills_merge.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_psana.py to cxi_psana.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_circular_gain_mask.py to cspad_circular_gain_mask.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/frame_extractor.py to frame_extractor.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xes_histograms.py to xes_histograms.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/weather.py to weather.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/get_next_trial_id.py to get_next_trial_id.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xpp_simulate.py to xpp_simulate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/plot_to_subpixel.py to plot_to_subpixel.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/drift.py to drift.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cbf_average.py to cbf_average.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/calc_gain_ratio.py to calc_gain_ratio.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/striping.py to striping.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/launch_fxs.py to launch_fxs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/FEE_average_plot.py to FEE_average_plot.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xes_finalise.py to xes_finalise.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_cspad_pinwheel.py to cxi_cspad_pinwheel.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/experiment_residuals.py to experiment_residuals.cpython-312.pyc /usr/lib/python3.12/dist-packages/xfel/command_line/experiment_residuals.py:203: SyntaxWarning: invalid escape sequence '\D' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_xmerge.py to cxi_xmerge.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/detector_residuals.py to detector_residuals.cpython-312.pyc /usr/lib/python3.12/dist-packages/xfel/command_line/detector_residuals.py:1124: SyntaxWarning: invalid escape sequence '\D' /usr/lib/python3.12/dist-packages/xfel/command_line/detector_residuals.py:1126: SyntaxWarning: invalid escape sequence '\D' /usr/lib/python3.12/dist-packages/xfel/command_line/detector_residuals.py:1266: SyntaxWarning: invalid escape sequence '\A' /usr/lib/python3.12/dist-packages/xfel/command_line/detector_residuals.py:1267: SyntaxWarning: invalid escape sequence '\c' /usr/lib/python3.12/dist-packages/xfel/command_line/detector_residuals.py:1268: SyntaxWarning: invalid escape sequence '\A' /usr/lib/python3.12/dist-packages/xfel/command_line/detector_residuals.py:1294: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/xfel/command_line/detector_residuals.py:1295: SyntaxWarning: invalid escape sequence '\A' /usr/lib/python3.12/dist-packages/xfel/command_line/detector_residuals.py:1296: SyntaxWarning: invalid escape sequence '\s' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/show_spot_separation.py to show_spot_separation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/h5_average.py to h5_average.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/overlay_spectra.py to overlay_spectra.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/runs_sentinel.py to runs_sentinel.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/experiment_json_to_cbf_def.py to experiment_json_to_cbf_def.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_generate_circular_gain_mask.py to cxi_generate_circular_gain_mask.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_detector_congruence.py to cspad_detector_congruence.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_cbf_metrology.py to cspad_cbf_metrology.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/brehm_diederichs.py to brehm_diederichs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_detector_format_versions.py to cxi_detector_format_versions.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/upload_mtz.py to upload_mtz.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_xtc_process.py to cxi_xtc_process.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/trial_stats.py to trial_stats.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/monitor_trials.py to monitor_trials.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/jungfrau_metrics.py to jungfrau_metrics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/subtract_background.py to subtract_background.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/frame_unpickler.py to frame_unpickler.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/beamcenter.py to beamcenter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/list_db_metadata.py to list_db_metadata.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_plotcv.py to cxi_plotcv.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/monitor_detectors.py to monitor_detectors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_spots.py to cxi_spots.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_mpi_submit.py to cxi_mpi_submit.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_detector_congruence2.py to cspad_detector_congruence2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/make_mar_mask.py to make_mar_mask.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/jobs_sentinel.py to jobs_sentinel.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_apply_metrology.py to cxi_apply_metrology.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_detector_shifts.py to cspad_detector_shifts.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_view.py to cxi_view.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_optical2cbfheader.py to cxi_optical2cbfheader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_diff.py to cxi_diff.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/make_dials_mask.py to make_dials_mask.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/recompute_mosaicity.py to recompute_mosaicity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/auto_submit.py to auto_submit.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/radial_average.py to radial_average.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/quadrants_cbf.py to quadrants_cbf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/postrefine.py to postrefine.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_calibdir2cbfheader.py to cxi_calibdir2cbfheader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_pyana.py to cxi_pyana.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel/sync_jf16m_geometry.py to sync_jf16m_geometry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel/jf16m_cxigeom2nexus.py to jf16m_cxigeom2nexus.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/mark1.py to mark1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/mark0.py to mark0.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/flatfile.py to flatfile.cpython-312.pyc /usr/lib/python3.12/dist-packages/xfel/metrology/flatfile.py:1022: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/xfel/metrology/flatfile.py:1024: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/xfel/metrology/flatfile.py:1026: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/xfel/metrology/flatfile.py:1028: SyntaxWarning: invalid escape sequence '\s' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/mark3.py to mark3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/quadrant.py to quadrant.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/mark10.py to mark10.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/legacy_scale/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/panel_fitting.py to panel_fitting.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/tst_cout.py to tst_cout.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/tst_cout_compile.py to tst_cout_compile.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/run_tests.py to run_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/simple_compilation.py to simple_compilation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/tst_equivalence.py to tst_equivalence.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/cout.py to cout.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/tokenization.py to tokenization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/show_calls.py to show_calls.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/insert_write_at_start_of_each_procedure.py to insert_write_at_start_of_each_procedure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/cout.py to cout.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/split.py to split.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/read.py to read.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/fem_include_search_paths.py to fem_include_search_paths.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/tst_read.py to tst_read.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/intrinsics.py to intrinsics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/read.py to read.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/equivalence.py to equivalence.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/regular_grid_on_unit_sphere.py to regular_grid_on_unit_sphere.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/map.py to map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/tst_set.py to tst_set.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/tst_map.py to tst_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/vector.py to vector.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/tst_vector.py to tst_vector.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/set.py to set.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests/tst_normal_equations.py to tst_normal_equations.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests/test_problems.py to test_problems.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/normal_eqns_solving.py to normal_eqns_solving.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/normal_eqns.py to normal_eqns.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/glmtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/matrix/row_echelon.py to row_echelon.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/matrix/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/lbfgs_recipe.py to lbfgs_recipe.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/rigid_body_refinement_core.py to rigid_body_refinement_core.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/chebyshev_lsq_example.py to chebyshev_lsq_example.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/integrating_a_weighted_sinc_function.py to integrating_a_weighted_sinc_function.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/functions.py to functions.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/principal_axes_of_inertia.py to principal_axes_of_inertia.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/immoptibox_ports.py to immoptibox_ports.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/minimizer_comparisons.py to minimizer_comparisons.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/bevington/silver.py to silver.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/bevington/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/lbfgs_linear_least_squares_fit.py to lbfgs_linear_least_squares_fit.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/flex_array_loops.py to flex_array_loops.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/flex_grid.py to flex_grid.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/bootstrap.py to bootstrap.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/sparse/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_singular.py to tst_singular.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_joint_lib.py to tst_joint_lib.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_free_motion_hard.py to tst_free_motion_hard.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_molecules.py to tst_molecules.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/free_motion_reference_impl.py to free_motion_reference_impl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/wx_free_motion.py to wx_free_motion.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_featherstone.py to tst_featherstone.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/joint_lib.py to joint_lib.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/test_simulation.py to test_simulation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/wx_molecules.py to wx_molecules.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_spherical_refinement.py to tst_spherical_refinement.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/wx_joint_lib.py to wx_joint_lib.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/featherstone.py to featherstone.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/test_utils.py to test_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_free_motion.py to tst_free_motion.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/wx_tardy.py to wx_tardy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/tst_energy_plots.py to tst_energy_plots.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/tardy.py to tardy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/tst_tardy.py to tst_tardy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/joint_lib.py to joint_lib.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/body_lib.py to body_lib.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/spatial_lib.py to spatial_lib.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/featherstone.py to featherstone.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/tst_basic.py to tst_basic.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/make_bundles.py to make_bundles.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg/svd.py to svd.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg/ext.py to ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg/householder.py to householder.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg/eigensystem.py to eigensystem.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/fftpack.py to fftpack.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgsb.py to lbfgsb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/minimizers.py to minimizers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/test_cases_tardy_pdb.py to test_cases_tardy_pdb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/tst_tardy_tree.py to tst_tardy_tree.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/tst_tardy_tree_find_paths.py to tst_tardy_tree_find_paths.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/rigidity_matrix_symbolic.py to rigidity_matrix_symbolic.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/rigidity.py to rigidity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/tardy_tree.py to tardy_tree.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/tst_rigidity.py to tst_rigidity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/random/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/differential_evolution.py to differential_evolution.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/restraints.py to restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/genetic_algorithm_with_mp.py to genetic_algorithm_with_mp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/lbfgs_fem.py to lbfgs_fem.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_reductions.py to generate_reductions.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_operator_traits_builtin.py to generate_operator_traits_builtin.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/operator_functor_info.py to operator_functor_info.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_all.py to generate_all.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_algebras.py to generate_algebras.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_operator_functors.py to generate_operator_functors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_apply.py to generate_apply.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_std_imports.py to generate_std_imports.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/refinebase.py to refinebase.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/optional.py to optional.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/min_logging.py to min_logging.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/compulsory.py to compulsory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/minimizer.py to minimizer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/bounds.py to bounds.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/reparams.py to reparams.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/realsymmetricpseudoinverse.py to realsymmetricpseudoinverse.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/twisted_gaussian.py to twisted_gaussian.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/auxiliary.py to auxiliary.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/r3_utils.py to r3_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/cross_entropy.py to cross_entropy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_2d_zernike.py to tst_2d_zernike.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_multivariate_moments.py to tst_multivariate_moments.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/sphere_sphere_intersection.py to sphere_sphere_intersection.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_zernike_mom.py to tst_zernike_mom.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/zernike_align_fft.py to zernike_align_fft.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/incremental_SO3_sampling.py to incremental_SO3_sampling.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/besselk.py to besselk.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_undirected_graph.py to tst_undirected_graph.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/fliege_mayer_900_ylm.py to fliege_mayer_900_ylm.cpython-312.pyc /usr/lib/python3.12/dist-packages/scitbx/math/fliege_mayer_900_ylm.py:1: SyntaxWarning: invalid escape sequence '\i' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_bessel_zeros.py to tst_bessel_zeros.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/chebyshev_lsq_fit.py to chebyshev_lsq_fit.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/clustering.py to clustering.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/lefebvre.py to lefebvre.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/so3_lie_algebra.py to so3_lie_algebra.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/minimum_covering_ellipsoid.py to minimum_covering_ellipsoid.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/des_3_100_13.py to des_3_100_13.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_so3_lie_algebra.py to tst_so3_lie_algebra.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/periodogram.py to periodogram.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_r3_rotation.py to tst_r3_rotation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_gaussian.py to tst_gaussian.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_curve_fitting.py to tst_curve_fitting.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_resample.py to tst_resample.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_weighted_correlation.py to tst_weighted_correlation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_error_propagation_matrix_inverse.py to tst_error_propagation_matrix_inverse.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_fit_peak.py to tst_fit_peak.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_fit_quadratic_function.py to tst_fit_quadratic_function.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_uniform_rotation_matrix.py to tst_uniform_rotation_matrix.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_minimum_covering_ellipsoid.py to tst_minimum_covering_ellipsoid.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_cubic_equation.py to tst_cubic_equation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_halton.py to tst_halton.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_math.py to tst_math.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_euler_angles.py to tst_euler_angles.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_periodogram.py to tst_periodogram.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_gaussian_fit_1d_analytical.py to tst_gaussian_fit_1d_analytical.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_tetrahedron.py to tst_tetrahedron.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_exp_functions.py to tst_exp_functions.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_orthonormal_basis.py to tst_orthonormal_basis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_g_function.py to tst_g_function.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_bessel.py to tst_bessel.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_quadrature.py to tst_quadrature.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_angle_derivative.py to tst_angle_derivative.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_dmatrix.py to tst_dmatrix.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_similarity_indices.py to tst_similarity_indices.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_superpose.py to tst_superpose.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_clustering.py to tst_clustering.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_line_search.py to tst_line_search.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_gcd.py to tst_gcd.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/spe.py to spe.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/des_3_240_21.py to des_3_240_21.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/euler_angles.py to euler_angles.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/fliege_mayer_400.py to fliege_mayer_400.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/farey.py to farey.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/distributions.py to distributions.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/curve_fitting.py to curve_fitting.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/breakpoint.py to breakpoint.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/ext.py to ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/fliege_mayer_900.py to fliege_mayer_900.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_zernike.py to tst_zernike.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/multiple_superposition.py to multiple_superposition.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/sieve_of_eratosthenes.py to sieve_of_eratosthenes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/superpose.py to superpose.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/undirected_graph.py to undirected_graph.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/fit_quadratic_function.py to fit_quadratic_function.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/scale_curves.py to scale_curves.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/fit_peak.py to fit_peak.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/cubic_spline.py to cubic_spline.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/gumbel.py to gumbel.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/gaussian.py to gaussian.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/gaussian_fit.py to gaussian_fit.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/boost_python/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graphics_utils/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graphics_utils/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/suffixtree/single.py to single.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/suffixtree/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family/shared.py to shared.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family/flex.py to flex.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/tst_mpi_split_evaluator.py to tst_mpi_split_evaluator.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/tst_lbfgs_fem.py to tst_lbfgs_fem.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/tst_func_free_line_search.py to tst_func_free_line_search.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/tst_curvatures.py to tst_curvatures.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/golden_section_search.py to golden_section_search.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/direct_search_simulated_annealing.py to direct_search_simulated_annealing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/simplex.py to simplex.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/wigner/tst_wigner3j.py to tst_wigner3j.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/wigner/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/cubicle_neighbors.py to cubicle_neighbors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/iso_surface/tst_iso_surface.py to tst_iso_surface.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/iso_surface/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/minpack.py to minpack.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/signal_utils.py to signal_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/tst_random_transform.py to tst_random_transform.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/robust_statistics.py to robust_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/command_line.py to command_line.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/random_utils.py to random_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/tst_graph.py to tst_graph.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/misc.py to misc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/dicts.py to dicts.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/tst_robust.py to tst_robust.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/graph_tools.py to graph_tools.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/random_transform.py to random_transform.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/smoothing.py to smoothing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/boost_python/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stdlib/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/math_support/sphere_formulae.py to sphere_formulae.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/math_support/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/run_tests.py to run_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/adsc_client.py to adsc_client.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/spotfinder_server_read_file.py to spotfinder_server_read_file.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/mp_spotfinder_server_read_file.py to mp_spotfinder_server_read_file.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/pilatus_client.py to pilatus_client.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/specific_client_example.py to specific_client_example.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/multipart_encoder.py to multipart_encoder.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/general_client_example.py to general_client_example.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/spotfinder_server_client_push.py to spotfinder_server_client_push.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/bcsb_client_example.py to bcsb_client_example.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/apache_bcsb.py to apache_bcsb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/apache_utils.py to apache_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/apache.py to apache.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/mp_spotfinder_server_is_alive.py to mp_spotfinder_server_is_alive.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/thin_client.py to thin_client.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/apache_dials.py to apache_dials.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/dxtbx_toolbox/practical_heuristics.py to practical_heuristics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/dxtbx_toolbox/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/core_toolbox/close_spots_detail.py to close_spots_detail.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/core_toolbox/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/array_family/flex.py to flex.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/mp_spotfinder_server_read_file.py to mp_spotfinder_server_read_file.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/sweep_strength.py to sweep_strength.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/image_viewer.py to image_viewer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/signal_strength.py to signal_strength.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/find_active_area.py to find_active_area.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/thin_client.py to thin_client.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction/geometry.py to geometry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction/imagefiles.py to imagefiles.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel/correction_vector_plot.py to correction_vector_plot.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel/cxi_run3.py to cxi_run3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel/cxi_phil.py to cxi_phil.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/wrappers.py to wrappers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/practical_heuristics.py to practical_heuristics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/image_viewer.py to image_viewer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx/ice2.py to ice2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx/method2_resolution.py to method2_resolution.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx/ice_nztt.py to ice_nztt.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx/spotreporter.py to spotreporter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/stats_distl.py to stats_distl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/signal_strength.py to signal_strength.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/exception.py to exception.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx/copy_files.py to copy_files.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cma_es/run_tests.py to run_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cma_es/cma_es_interface.py to cma_es_interface.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cma_es/tst_cma_es.py to tst_cma_es.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cma_es/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx/self_match.py to self_match.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx/sample.py to sample.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/source_generators/generate_all.py to generate_all.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/source_generators/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu/tst_gpu_multisource_background.py to tst_gpu_multisource_background.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu/tst_shoeboxes.py to tst_shoeboxes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu/tst_exafel_api.py to tst_exafel_api.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling/forward_models.py to forward_models.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling/predictions.py to predictions.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling/FormatHDF5AttributeGeometry.py to FormatHDF5AttributeGeometry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_input.py to nanoBragg_input.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_gui_dialogs.py to nanoBragg_gui_dialogs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_mosaic.py to tst_nanoBragg_mosaic.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_multisource_background.py to tst_multisource_background.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_cbf_write.py to tst_nanoBragg_cbf_write.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_beam.py to nanoBragg_beam.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_gui_frames.py to nanoBragg_gui_frames.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_minimal.py to tst_nanoBragg_minimal.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_multipanel.py to tst_nanoBragg_multipanel.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_threads.py to nanoBragg_threads.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_anisotropic_mosaicity.py to tst_anisotropic_mosaicity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_crystal.py to nanoBragg_crystal.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_gui_init.py to nanoBragg_gui_init.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_gaussian_mosaicity.py to tst_gaussian_mosaicity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/anisotropic_mosaicity.py to anisotropic_mosaicity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_gaussian_mosaicity2.py to tst_gaussian_mosaicity2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_pilatus.py to tst_nanoBragg_pilatus.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_gauss_argchk.py to tst_gauss_argchk.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_basic.py to tst_nanoBragg_basic.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/sim_data.py to sim_data.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/pixel/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/parameter_errors.py to parameter_errors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/stage_two_utils.py to stage_two_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/base_refiner.py to base_refiner.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/manager.py to manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/monoclinic.py to monoclinic.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/tetragonal.py to tetragonal.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/orthorhombic.py to orthorhombic.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/hexagonal.py to hexagonal.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/stage_two_refiner.py to stage_two_refiner.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/parameters.py to parameters.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/hopper_ensemble_utils.py to hopper_ensemble_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/phil.py to phil.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/hopper_io.py to hopper_io.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/psf.py to psf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/hopper_utils.py to hopper_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/ensemble_refine_launcher.py to ensemble_refine_launcher.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/prep_stage2_input.py to prep_stage2_input.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/device.py to device.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/attr_list.py to attr_list.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/mpi_logger.py to mpi_logger.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/kokkos/tst_kokkos_lib.py to tst_kokkos_lib.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/kokkos/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/browser.py to browser.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/process_control.py to process_control.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/layout.py to layout.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/polygon.py to polygon.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/ensemble_validation.py to ensemble_validation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/mtz_dump.py to mtz_dump.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/heavy_atoms.py to heavy_atoms.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/xtriage.py to xtriage.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/errors.py to errors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/app.py to app.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports/blast.py to blast.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports/pdb_symmetry.py to pdb_symmetry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/wx4_compatibility.py to wx4_compatibility.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/checklistctrl.py to checklistctrl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/info_panels.py to info_panels.cpython-312.pyc /usr/lib/python3.12/dist-packages/wxtbx/info_panels.py:208: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/wxtbx/info_panels.py:418: SyntaxWarning: invalid escape sequence '\s' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/custom_restraints.py to custom_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/metallicbutton.py to metallicbutton.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/tables.py to tables.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/symmetry_dialog.py to symmetry_dialog.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/listeditor.py to listeditor.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/sequence_view.py to sequence_view.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/misc_dialogs.py to misc_dialogs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/icons.py to icons.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots/molprobity.py to molprobity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots/emringer.py to emringer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/qstat_view.py to qstat_view.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/loggraph.py to loggraph.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/xtriage.py to xtriage.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/inspect_r_free_flags.py to inspect_r_free_flags.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/anomalous_differences_histogram.py to anomalous_differences_histogram.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/pdb_statistics.py to pdb_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/wxpython.py to wxpython.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/plot_anomalous_scattering.py to plot_anomalous_scattering.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/show_file_info.py to show_file_info.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/b_plot.py to b_plot.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/plan_sad_experiment.py to plan_sad_experiment.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/pdb_editor.py to pdb_editor.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/anomalous_scattering.py to anomalous_scattering.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/windows.py to windows.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/b_plot.py to b_plot.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/segmentedctrl.py to segmentedctrl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/adp_statistics.py to adp_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/monitor.py to monitor.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/intctrl.py to intctrl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/choice_multi.py to choice_multi.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/ints.py to ints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/numbers.py to numbers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/strctrl.py to strctrl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/tree.py to tree.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/symop.py to symop.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/choice.py to choice.cpython-312.pyc /usr/lib/python3.12/dist-packages/wxtbx/phil_controls/choice.py:18: SyntaxWarning: invalid escape sequence '\*' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/text_base.py to text_base.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/space_group.py to space_group.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/array_label.py to array_label.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/path.py to path.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/boolctrl.py to boolctrl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/floatctrl.py to floatctrl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/misc_ctrls.py to misc_ctrls.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/simple_dialogs.py to simple_dialogs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/tribool.py to tribool.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/strings.py to strings.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/floats.py to floats.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/unit_cell.py to unit_cell.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/path_dialogs.py to path_dialogs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/polygon_db_viewer.py to polygon_db_viewer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/bitmaps.py to bitmaps.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/pdb_editor.py to pdb_editor.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/hybrid_times.py to hybrid_times.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/graph_structure_comparison.py to graph_structure_comparison.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/maximum_clique.py to maximum_clique.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/utility.py to utility.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/connected_component_algorithm.py to connected_component_algorithm.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/metric.py to metric.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/breadth_first_search.py to breadth_first_search.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/minimum_cut_enumerate.py to minimum_cut_enumerate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/min_cut_max_flow.py to min_cut_max_flow.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/clustering_algorithm.py to clustering_algorithm.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/optional.py to optional.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/tuple.py to tuple.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/std_pair.py to std_pair.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/rational.py to rational.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/python.py to python.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/double_overflow.py to double_overflow.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/show_platform_info.py to show_platform_info.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/inexact.py to inexact.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py to nested_cpp_loops_with_check_signals.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/lcm.py to lcm.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/divide_by_zero.py to divide_by_zero.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/show_environ_usage.py to show_environ_usage.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/int_overflow.py to int_overflow.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/gcd.py to gcd.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/segmentation_fault.py to segmentation_fault.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/multipolar.py to multipolar.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/math_module.py to math_module.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/dmtbx.py to dmtbx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/view_fft_map.py to view_fft_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/space_subgroups.py to space_subgroups.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/neutron_structure_factors.py to neutron_structure_factors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/unit_cell_refinement.py to unit_cell_refinement.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_phase_o_phrenia.py to tst_phase_o_phrenia.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_exp_i_alpha_derivatives.py to tst_exp_i_alpha_derivatives.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/all_axes.py to all_axes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/ccp4_map.py to ccp4_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/miller_transform.py to miller_transform.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/fft_map_electron_density_around_atom.py to fft_map_electron_density_around_atom.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/lebedev_2005_perturbation.py to lebedev_2005_perturbation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/reduced_cell_two_folds.py to reduced_cell_two_folds.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/exp_i_alpha_derivatives.py to exp_i_alpha_derivatives.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/cr2o3_primitive_cell.py to cr2o3_primitive_cell.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_structure_factor_derivatives_2.py to tst_structure_factor_derivatives_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py to sites_least_squares_derivatives.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus/sites_derivatives.py to sites_derivatives.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus/site_derivatives.py to site_derivatives.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus/u_star_derivatives.py to u_star_derivatives.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/g_exp_i_alpha_derivatives.py to g_exp_i_alpha_derivatives.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_space_subgroups.py to tst_space_subgroups.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/analyze_adp.py to analyze_adp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_derivatives_2.py to structure_factor_derivatives_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_derivatives_3.py to structure_factor_derivatives_3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/maximum_subgroups.py to maximum_subgroups.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/f_model_example.py to f_model_example.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/steve_collins.py to steve_collins.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/change_hand_p31.py to change_hand_p31.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/list_non_principal_continuous_shifts.py to list_non_principal_continuous_shifts.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/symops_530.py to symops_530.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_structure_factor_derivatives_4.py to tst_structure_factor_derivatives_4.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/le_page_1982_vs_lebedev_2005.py to le_page_1982_vs_lebedev_2005.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/space_group_matrices.py to space_group_matrices.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/map_skewness.py to map_skewness.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/test_levenberg_sparse.py to test_levenberg_sparse.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa/per_lattice_postrefinement.py to per_lattice_postrefinement.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa/scale.py to scale.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa/join.py to join.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/sigma_correction.py to sigma_correction.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/task4.py to task4.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/tst_permutations.py to tst_permutations.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/data_subset.py to data_subset.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/test1.py to test1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/show_results.py to show_results.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/data_utilities.py to data_utilities.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/test_cc_half.py to test_cc_half.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_derivatives.py to structure_factor_derivatives.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/sub_group_graph.py to sub_group_graph.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/trigonal_r_vs_tetragonal_i.py to trigonal_r_vs_tetragonal_i.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/miller_common_sets.py to miller_common_sets.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_g_exp_i_alpha_derivatives.py to tst_g_exp_i_alpha_derivatives.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/find_distances_using_cpp_objects.py to find_distances_using_cpp_objects.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/find_sys_abs_equiv_space_groups.py to find_sys_abs_equiv_space_groups.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/site_symmetry_constraints.py to site_symmetry_constraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/random_puckers.py to random_puckers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/unit_cell_minimizers.py to unit_cell_minimizers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_structure_factor_derivatives_3.py to tst_structure_factor_derivatives_3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/hirshfeld_test.py to hirshfeld_test.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/location_part.py to location_part.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/g_exp_i_partial_derivatives.py to g_exp_i_partial_derivatives.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/random_f_calc.py to random_f_calc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/cr2o3_consistency_checks.py to cr2o3_consistency_checks.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_derivatives_4.py to structure_factor_derivatives_4.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/adp_symmetry_constraints.py to adp_symmetry_constraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/convert_ccp4_symop_lib.py to convert_ccp4_symop_lib.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_structure_factor_derivatives.py to tst_structure_factor_derivatives.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/site_symmetry_table.py to site_symmetry_table.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/quartz_structure.py to quartz_structure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/getting_started.py to getting_started.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/phase_o_phrenia.py to phase_o_phrenia.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/covariance/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/french_wilson.py to french_wilson.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/real_space_refinement_simple.py to real_space_refinement_simple.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/auto_sharpen.py to auto_sharpen.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/segment_and_split_map.py to segment_and_split_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_interpolation_2.py to tst_interpolation_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/box.py to box.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/refine_sharpening.py to refine_sharpening.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/mem.py to mem.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_atom_curves.py to tst_atom_curves.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_bcr.py to tst_bcr.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/resolution_from_map_and_model.py to resolution_from_map_and_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/prepare_map_for_docking.py to prepare_map_for_docking.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/minimization.py to minimization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_resolution_from_map_and_model.py to tst_resolution_from_map_and_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/mask.py to mask.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_atom_radius_as_central_peak_width.py to tst_atom_radius_as_central_peak_width.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_interpolation.py to tst_interpolation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/refine_scales_errors.py to refine_scales_errors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_loft.py to tst_loft.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_target_and_gradients.py to tst_target_and_gradients.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/map_symmetry.py to map_symmetry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_ccp.py to tst_ccp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_get_percentile_cutoffs.py to tst_get_percentile_cutoffs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_asymmetric_map.py to tst_asymmetric_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/bcr/bcr.py to bcr.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/bcr/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_real_space_refinement_simple.py to tst_real_space_refinement_simple.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_peak_volume_estimate.py to tst_peak_volume_estimate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_map_peak_3d_as_2d.py to tst_map_peak_3d_as_2d.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_mask.py to tst_mask.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/neutron/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/from_scatterers.py to from_scatterers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/manager.py to manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/global_counters.py to global_counters.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/gradients_fft.py to gradients_fft.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/from_scatterers_fft.py to from_scatterers_fft.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/from_scatterers_direct.py to from_scatterers_direct.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/misc.py to misc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/gradients_base.py to gradients_base.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/from_scatterers_direct_parallel.py to from_scatterers_direct_parallel.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/gradient_flags.py to gradient_flags.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/gradients_direct.py to gradients_direct.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/gradients.py to gradients.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/observations/tst_observations.py to tst_observations.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/observations/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/scatterer.py to scatterer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/minimization.py to minimization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/target_functors.py to target_functors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/weighting_schemes.py to weighting_schemes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets/tst_shelxl_wght_ls.py to tst_shelxl_wght_ls.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets/tst_r1.py to tst_r1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets/r1.py to r1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/ext.py to ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/observation_types.py to observation_types.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure.py to structure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/fmt_utils.py to fmt_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/debug_utils.py to debug_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/tst_cns_epsilon.py to tst_cns_epsilon.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/structure_factor_utils.py to structure_factor_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/approx_amplitude_vs_resolution.py to approx_amplitude_vs_resolution.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/space_group_option_parser.py to space_group_option_parser.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/direct_or_fft.py to direct_or_fft.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/make_settings.py to make_settings.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/random_structure.py to random_structure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/github.py to github.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/electron_density_sampling.py to electron_density_sampling.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/run_shelx76.py to run_shelx76.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/tst_cns_hl.py to tst_cns_hl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/create_models_or_maps.py to create_models_or_maps.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/make_cns_input.py to make_cns_input.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/cns_density_modification.py to cns_density_modification.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/run_shelx.py to run_shelx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/macro_mol/rotation_parameters.py to rotation_parameters.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/macro_mol/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/reindex.py to reindex.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/tst_super_cell.py to tst_super_cell.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/tst_distance_based_connectivity.py to tst_distance_based_connectivity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/burzlaff_zimmermann_dewolff.py to burzlaff_zimmermann_dewolff.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/super_cell.py to super_cell.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/find_best_cell.py to find_best_cell.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/distance_based_connectivity.py to distance_based_connectivity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/direct_space_asu.py to direct_space_asu.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/close_packing.py to close_packing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/coordination_sequences.py to coordination_sequences.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_geometry_restraints.py to tst_geometry_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_geometry_restraints_lbfgs.py to tst_geometry_restraints_lbfgs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_grouped_data.py to tst_grouped_data.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_diffuse.py to tst_diffuse.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller.py to tst_miller.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_fft_map.py to tst_miller_fft_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_reciprocal_space_asu.py to tst_reciprocal_space_asu.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_show_cosets.py to tst_show_cosets.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_pointgroup_tools.py to tst_pointgroup_tools.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_r_free_utils.py to tst_r_free_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_loc_res.py to tst_loc_res.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_fast_nv1995.py to tst_fast_nv1995.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_maptbx_mask.py to tst_maptbx_mask.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_pair_asu_table.py to tst_pair_asu_table.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_amplitude_normalisation.py to tst_amplitude_normalisation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray.py to tst_xray.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_change_basis.py to tst_change_basis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_space_group_type_tidy_cb_op_t.py to tst_space_group_type_tidy_cb_op_t.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_wilson_plot.py to tst_wilson_plot.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx.py to tst_sgtbx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_triplet_generator.py to tst_triplet_generator.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_fcalc_fft_stability.py to tst_fcalc_fft_stability.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_mem_2.py to tst_mem_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_adp_constraints.py to tst_adp_constraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_find_best_cell.py to tst_find_best_cell.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_refine_xray_curvs.py to tst_refine_xray_curvs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_expand_to_p1.py to tst_expand_to_p1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_lookup_utils.py to tst_miller_lookup_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_coordination_sequences.py to tst_coordination_sequences.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_data_manipulation.py to tst_miller_data_manipulation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_reflection_statistics.py to tst_reflection_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_crystal.py to tst_crystal.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_statistics_graphs.py to tst_statistics_graphs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_web_change_basis.py to tst_web_change_basis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_lattice_symmetry.py to tst_sgtbx_lattice_symmetry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_harker.py to tst_sgtbx_harker.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_map_is_periodic.py to tst_map_is_periodic.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sf_low_res_accuracy.py to tst_sf_low_res_accuracy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_grm_modifications.py to tst_grm_modifications.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_french_wilson.py to tst_french_wilson.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_twin_target.py to tst_twin_target.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_denominators.py to tst_sgtbx_denominators.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_map_weights_for_symmetry_summation.py to tst_map_weights_for_symmetry_summation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_direct_scaling.py to tst_direct_scaling.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_wavelength_units.py to tst_wavelength_units.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_connectivity.py to tst_connectivity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_grm_pickling.py to tst_grm_pickling.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_tidy_pickling.py to tst_sgtbx_tidy_pickling.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_crystal_asu_clusters.py to tst_crystal_asu_clusters.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_adp_aniso_restraints.py to tst_adp_aniso_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray_fast_gradients.py to tst_xray_fast_gradients.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_krivy_gruber.py to tst_krivy_gruber.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_double_step_filtration.py to tst_miller_double_step_filtration.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_geometry_restraints_2.py to tst_geometry_restraints_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_maptbx_box.py to tst_maptbx_box.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray_derivatives.py to tst_xray_derivatives.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_adp_constraints_cartesian.py to tst_adp_constraints_cartesian.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_subgroups.py to tst_sgtbx_subgroups.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_f_model.py to tst_f_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_prepare_map_for_docking.py to tst_prepare_map_for_docking.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray_minimization.py to tst_xray_minimization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_direct_space_asu.py to tst_direct_space_asu.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_connectivity_allsym.py to tst_connectivity_allsym.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_weighting_schemes.py to tst_weighting_schemes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_emma.py to tst_emma.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray_minimization_failure.py to tst_xray_minimization_failure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_site_constraints.py to tst_sgtbx_site_constraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_fourier_transform_real_part_at_x.py to tst_fourier_transform_real_part_at_x.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_create_models_or_maps.py to tst_create_models_or_maps.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_statistics.py to tst_miller_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_merge_equivalents.py to tst_miller_merge_equivalents.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray_target_functors.py to tst_xray_target_functors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sphericity.py to tst_sphericity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_mem.py to tst_mem.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_crystal_close_packing.py to tst_crystal_close_packing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sampled_model_density.py to tst_sampled_model_density.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_itvb_2001_table_a1427_hall_symbols.py to tst_itvb_2001_table_a1427_hall_symbols.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_math_module.py to tst_math_module.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_special_op_simplifier.py to tst_sgtbx_special_op_simplifier.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_maptbx_structure_factors.py to tst_maptbx_structure_factors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/plane_groups.py to plane_groups.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/cosets.py to cosets.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/sys_abs_equiv.py to sys_abs_equiv.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/rational_matrices_point_groups.py to rational_matrices_point_groups.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/reticular_twin_laws.py to reticular_twin_laws.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto/tst_asu.py to tst_asu.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py to generate_cpp_asu_table.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/facet_analysis.py to facet_analysis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/check_redundancies.py to check_redundancies.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/short_cuts.py to short_cuts.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/cut_plane.py to cut_plane.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/reference_table.py to reference_table.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py to plane_group_reference_table.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/show_cosets.py to show_cosets.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/reticular_pg_tools.py to reticular_pg_tools.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/pointgroup_tools.py to pointgroup_tools.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/symbol_confidence.py to symbol_confidence.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/subgroups.py to subgroups.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/lattice_symmetry.py to lattice_symmetry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/literal_description.py to literal_description.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/sub_lattice_tools.py to sub_lattice_tools.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/harker.py to harker.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/bravais_types.py to bravais_types.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/icsd_radii.py to icsd_radii.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/tiny_pse.py to tiny_pse.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/neutron.py to neutron.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/formula.py to formula.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/sasaki.py to sasaki.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/fp_fdp.py to fp_fdp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/combine_fits.py to combine_fits.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/create_n_gaussian_raw_cpp.py to create_n_gaussian_raw_cpp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/format_gaussian_fits.py to format_gaussian_fits.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/rez_rez_grant.py to rez_rez_grant.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/itvc_approx.py to itvc_approx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/itvc_fits.py to itvc_fits.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/kissel_fits.py to kissel_fits.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/itvc_kissel.py to itvc_kissel.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/hydrogen_plots.py to hydrogen_plots.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/itvc_cross_validation.py to itvc_cross_validation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/itvc_section61_io.py to itvc_section61_io.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/kissel_io.py to kissel_io.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/e_scattering_plots.py to e_scattering_plots.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/van_der_waals_radii.py to van_der_waals_radii.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/e_scattering.py to e_scattering.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/distance_based_connectivity.py to distance_based_connectivity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/henke.py to henke.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/xray_scattering/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/attenuation_coefficient.py to attenuation_coefficient.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/chemical_elements.py to chemical_elements.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/read_custom_scattering_dict.py to read_custom_scattering_dict.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/covalent_radii.py to covalent_radii.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/gaussian_fit.py to gaussian_fit.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/wavelengths.py to wavelengths.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/euclidean_model_matching.py to euclidean_model_matching.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx/generate_henke_cpp.py to generate_henke_cpp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx/generate_sasaki_cpp.py to generate_sasaki_cpp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal_orientation.py to crystal_orientation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/merging/brehm_diederichs.py to brehm_diederichs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/merging/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/run_examples.py to run_examples.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints/energies.py to energies.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints/flags.py to flags.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/shelx.py to shelx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/frac_cart.py to frac_cart.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/change_hand.py to change_hand.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/guide_to_notation.py to guide_to_notation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/jv_index.py to jv_index.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/jv_asu.py to jv_asu.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/jvx.py to jvx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/web_links.py to web_links.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/dispatcher.py to dispatcher.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/all_axes.py to all_axes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/change_basis.py to change_basis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/cgi_utils.py to cgi_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/io_utils.py to io_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/multiple_cell.py to multiple_cell.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/libtbx_help.py to libtbx_help.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/wyckoff.py to wyckoff.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/replay.py to replay.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/browse_settings.py to browse_settings.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/structure_factors.py to structure_factors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/structure_factors_pdb.py to structure_factors_pdb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/explore_symmetry.py to explore_symmetry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/emma.py to emma.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/lattice_symmetry.py to lattice_symmetry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/iotbx_cif_validate.py to iotbx_cif_validate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/change_setting.py to change_setting.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/phase_o_phrenia.py to phase_o_phrenia.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/array_family/flex.py to flex.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/symmetry_search.py to symmetry_search.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/reduction_base.py to reduction_base.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/gruber_1973.py to gruber_1973.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/gruber_1973_table_1.py to gruber_1973_table_1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/determine_unit_cell/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/krivy_gruber_1976.py to krivy_gruber_1976.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_proxy_registry.py to tst_proxy_registry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_angle_derivs.py to tst_angle_derivs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/manager.py to manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/linking_class.py to linking_class.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_process_nonbonded_proxies.py to tst_process_nonbonded_proxies.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/auto_linking_types.py to auto_linking_types.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/base_geometry.py to base_geometry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/distance_least_squares.py to distance_least_squares.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/standard_cif_links.py to standard_cif_links.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/lbfgs.py to lbfgs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/process_nonbonded_proxies.py to process_nonbonded_proxies.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/energies.py to energies.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_nonbonded_overlaps.py to tst_nonbonded_overlaps.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/nonbonded_overlaps.py to nonbonded_overlaps.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/flags.py to flags.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_motif.py to tst_motif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/masks/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/auto_sharpen.py to auto_sharpen.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/segment_and_split_map.py to segment_and_split_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/wavelength_units.py to wavelength_units.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/samosa_scale.py to samosa_scale.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/precession_view.py to precession_view.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/version.py to version.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/diffuse.py to diffuse.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/euclidean_model_matching.py to euclidean_model_matching.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/structure_factor_timings.py to structure_factor_timings.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/space_group_info.py to space_group_info.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/cod_select_and_pickle.py to cod_select_and_pickle.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/brehm_diederichs.py to brehm_diederichs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/find_reticular_twin_laws.py to find_reticular_twin_laws.cpython-312.pyc /usr/lib/python3.12/dist-packages/cctbx/command_line/find_reticular_twin_laws.py:37: SyntaxWarning: invalid escape sequence '\%' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/cctbx_test_nightly.py to cctbx_test_nightly.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/subgroups.py to subgroups.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/samosa_join.py to samosa_join.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/xray_structure.show.py to xray_structure.show.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/eltbx.show_fp_fdp.py to eltbx.show_fp_fdp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/form_factor_query.py to form_factor_query.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/statistics.py to statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/translation_search.py to translation_search.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/r_free_utils.py to r_free_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller/tst_reindexing.py to tst_reindexing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller/reindexing.py to reindexing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller/display.py to display.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller/tst_map_to_asu_isym.py to tst_map_to_asu_isym.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/anharmonic.py to anharmonic.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/tst_dev.py to tst_dev.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/tst_bfgs.py to tst_bfgs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/tardy_adaptor.py to tardy_adaptor.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/dev.py to dev.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/cod_refine.py to cod_refine.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/cif_refine.py to cif_refine.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/cod_select_and_pickle.py to cod_select_and_pickle.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/bfgs.py to bfgs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/eval_iso_vs_refined.py to eval_iso_vs_refined.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/pdb_dev.py to pdb_dev.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adptbx.py to adptbx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/grow_density.py to grow_density.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/map_tools.py to map_tools.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage/validation.py to validation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/real_space_correlation.py to real_space_correlation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/tst_correlation.py to tst_correlation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/tst_composite_omit_map_2.py to tst_composite_omit_map_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/kick.py to kick.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/fem.py to fem.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/polder.py to polder.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/correlation.py to correlation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/mtriage.py to mtriage.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/tst_composite_omit_map_3.py to tst_composite_omit_map_3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/tst_map_model_cc_and_vals_per_atom_xtal.py to tst_map_model_cc_and_vals_per_atom_xtal.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/fobs_minus_fobs_map.py to fobs_minus_fobs_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/superpose.py to superpose.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/tst_composite_omit_map.py to tst_composite_omit_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/map_model_cc.py to map_model_cc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/composite_omit_map.py to composite_omit_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/invariant_domain.py to invariant_domain.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_4.py to tst_parameterization_4.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_3.py to tst_parameterization_3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_validate_H.py to tst_validate_H.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_fd_3.py to tst_riding_fd_3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/connectivity.py to connectivity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_fd_5.py to tst_riding_fd_5.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_2.py to tst_parameterization_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/riding.py to riding.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_8.py to tst_parameterization_8.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_3.py to tst_add_hydrogen_3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_fd_1.py to tst_riding_fd_1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_coefficients.py to tst_riding_coefficients.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_fd_4.py to tst_riding_fd_4.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_7.py to tst_parameterization_7.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_minimize.py to tst_riding_minimize.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_0.py to tst_add_hydrogen_0.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/parameterization.py to parameterization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_5.py to tst_parameterization_5.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_1.py to tst_parameterization_1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/find.py to find.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_2.py to tst_add_hydrogen_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_connectivity.py to tst_connectivity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_9.py to tst_parameterization_9.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_fd_2.py to tst_riding_fd_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_manager.py to tst_riding_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/build_hydrogens.py to build_hydrogens.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/validate_H.py to validate_H.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/specialised_hydrogen_atoms.py to specialised_hydrogen_atoms.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_6.py to tst_parameterization_6.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_add_hydrogen.py to tst_add_hydrogen.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/reduce_hydrogen.py to reduce_hydrogen.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suitenout.py to suitenout.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/mainchain.py to mainchain.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/transdent.py to transdent.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suiteninput.py to suiteninput.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/dualparse.py to dualparse.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suiteninit.py to suiteninit.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suitenamedefs.py to suitenamedefs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/diangle.py to diangle.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suitealyze.py to suitealyze.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suitename.py to suitename.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suites.py to suites.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_util.py to mod_util.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_input.py to mod_input.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_ga.py to mod_ga.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_optimize.py to mod_optimize.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_mtz.py to mod_mtz.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_masks.py to mod_masks.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon/tst_gui.py to tst_gui.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon/tst_polygon_data.py to tst_polygon_data.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon/output.py to output.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/alignment/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/analysis.py to analysis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/tls_as_xyz.py to tls_as_xyz.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/optimise_amplitudes.py to optimise_amplitudes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm15.py to perm15.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/command_line.py to command_line.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm10.py to perm10.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm12.py to perm12.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm13.py to perm13.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm14.py to perm14.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/ladp.py to ladp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/tools.py to tools.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/decompose.py to decompose.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm11.py to perm11.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model_vs_data.py to model_vs_data.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/tst_analyze_model.py to tst_analyze_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/backbone.py to backbone.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/tst_backbone.py to tst_backbone.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/analyze_model.py to analyze_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/domains_from_pae.py to domains_from_pae.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den/refinement.py to refinement.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den/plot_weights.py to plot_weights.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent/map_to_water.py to map_to_water.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent/ensemble_ordered_solvent.py to ensemble_ordered_solvent.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent/ordered_solvent.py to ordered_solvent.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/extend_sidechains.py to extend_sidechains.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/tst_make_library.py to tst_make_library.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/tst_extend_sidechains_2.py to tst_extend_sidechains_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/make_library.py to make_library.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/minimize_chain.py to minimize_chain.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/berkeley_ramalyze.py to berkeley_ramalyze.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/custom_gm.py to custom_gm.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/ccd.py to ccd.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/starting_conformations.py to starting_conformations.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/cablam_idealization.py to cablam_idealization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands/lifi.py to lifi.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands/tst_00.py to tst_00.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/tst_extend_sidechains.py to tst_extend_sidechains.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_idealization.py to loop_idealization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/merge_models.py to merge_models.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model/f_model_info.py to f_model_info.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model/f_model.py to f_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/tst_switch_rotamers.py to tst_switch_rotamers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/ntc.py to ntc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/rotatable_bonds.py to rotatable_bonds.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/fab_elbow_angle.py to fab_elbow_angle.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/grid2d.py to grid2d.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning/probabalistic_detwinning.py to probabalistic_detwinning.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning/twin_f_model.py to twin_f_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model/restraints.py to restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model/statistics.py to statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model/model.py to model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/real_space/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/real_space/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py to tst_kb_sol_u_star_fd.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/example2.py to example2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/scaler.py to scaler.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/example.py to example.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/f_model_all_scales.py to f_model_all_scales.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_aniso_scaler.py to tst_aniso_scaler.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/multi_mask_bulk_solvent.py to multi_mask_bulk_solvent.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/mosaic.py to mosaic.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/kbu_refinery.py to kbu_refinery.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_mosaic.py to tst_mosaic.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_flat_nonuniform.py to tst_flat_nonuniform.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_bulk_solvent_and_scaling.py to tst_bulk_solvent_and_scaling.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/bulk_solvent_and_scaling.py to bulk_solvent_and_scaling.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py to tst_fit_kexpb_to_ktotal.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_scaler.py to tst_scaler.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components/cif_parser.py to cif_parser.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder_1.py to tst_polder_1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_probe.py to tst_probe.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_msa.py to tst_msa.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_isomorphous_difference_misc.py to tst_isomorphous_difference_misc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_maps_misc.py to tst_maps_misc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_model_map.py to tst_model_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_angle.py to tst_angle.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_ligand_ncs.py to tst_ligand_ncs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_process_predicted_model.py to tst_process_predicted_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_geo_min_restraints_phil.py to tst_geo_min_restraints_phil.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_table_one.py to tst_table_one.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_real_space_correlation.py to tst_real_space_correlation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_schrodinger_interface.py to tst_schrodinger_interface.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_adp_restraints.py to tst_adp_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_refine_anomalous_substructure.py to tst_refine_anomalous_substructure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_add_arrows_on_plot.py to tst_add_arrows_on_plot.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_command_line_input.py to tst_command_line_input.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_reduce_timeout.py to tst_reduce_timeout.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_map_coeffs_simple.py to tst_map_coeffs_simple.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_sequence_validation.py to tst_sequence_validation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_loop_closure.py to tst_loop_closure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder.py to tst_polder.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_multi_residue_class.py to tst_multi_residue_class.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_ringer.py to tst_ringer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_fmodel.py to tst_fmodel.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_cis_trans_peptide_link.py to tst_cis_trans_peptide_link.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_4muy.py to tst_formula_t_S_10_vs_11_4muy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_get_t_scheme.py to tst_get_t_scheme.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls_analysis.py to tst_tls_analysis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls_optimise_amplitudes.py to tst_tls_optimise_amplitudes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_01.py to tst_u_tls_vs_u_ens_01.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_00.py to tst_u_tls_vs_u_ens_00.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls.py to tst_tls.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_04.py to tst_u_tls_vs_u_ens_04.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls_refinement_fft.py to tst_tls_refinement_fft.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_2igd.py to tst_formula_t_S_10_vs_11_2igd.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls_as_xyz.py to tst_tls_as_xyz.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_02.py to tst_u_tls_vs_u_ens_02.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_03.py to tst_u_tls_vs_u_ens_03.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls_utils.py to tst_tls_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/make_fake_anomalous_data.py to make_fake_anomalous_data.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_helix_sheet_recs_as_pdb_files.py to tst_helix_sheet_recs_as_pdb_files.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_cablam.py to tst_cablam.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder_ccs.py to tst_polder_ccs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_add_h_to_water.py to tst_add_h_to_water.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_flipping_his.py to tst_flipping_his.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_model_vs_sequence.py to tst_model_vs_sequence.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder_2.py to tst_polder_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_cif_as_mtz_wavelengths.py to tst_cif_as_mtz_wavelengths.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_find_ncs.py to tst_find_ncs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_ml_estimate.py to tst_ml_estimate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_pdbtools.py to tst_pdbtools.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_statistics_output.py to tst_statistics_output.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_validate_ligands.py to tst_validate_ligands.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_utils_merge_models.py to tst_model_utils_merge_models.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_get_vdw_radii.py to tst_model_get_vdw_radii.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_remove_alternative_conformations.py to tst_model_remove_alternative_conformations.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_2.py to tst_model_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_mtrix.py to tst_model_mtrix.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_cart_ref_restraints.py to tst_model_cart_ref_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_ramachandran.py to tst_model_ramachandran.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_dedeuterate.py to tst_model_dedeuterate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model.py to tst_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_biomt_mtrix.py to tst_model_biomt_mtrix.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_symmetry.py to tst_model_symmetry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_merge.py to tst_model_merge.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_biomt_mtrix_2.py to tst_model_biomt_mtrix_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_ncs.py to tst_model_ncs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_tors_ref_restraints.py to tst_model_tors_ref_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_neutralize_scatterers.py to tst_model_neutralize_scatterers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_set_hydrogen_bond_length.py to tst_model_set_hydrogen_bond_length.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_geometry_minimization.py to tst_geometry_minimization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_cc_star.py to tst_cc_star.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_alignment.py to tst_alignment.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_map_type_parser.py to tst_map_type_parser.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_chain_comparison.py to tst_chain_comparison.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_fix_rotamer_outliers.py to tst_fix_rotamer_outliers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_fmodel_misc.py to tst_fmodel_misc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_prune_model.py to tst_prune_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_regularize_from_pdb.py to tst_regularize_from_pdb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder_3.py to tst_polder_3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_rank_scale_map.py to tst_rank_scale_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_apply_cif_restraints.py to tst_apply_cif_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_altloc_chain_break.py to tst_altloc_chain_break.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_model_vs_map.py to tst_model_vs_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_origin_ids.py to tst_origin_ids.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints.py to tst_minimization_ncs_constraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_ncs_search_flips.py to tst_ncs_search_flips.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_ncs_restraints_group_list.py to tst_ncs_restraints_group_list.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_geometry_minimization_ncs_constraints.py to tst_geometry_minimization_ncs_constraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints_real_space.py to tst_minimization_ncs_constraints_real_space.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints2.py to tst_minimization_ncs_constraints2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints3.py to tst_minimization_ncs_constraints3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_ncs_search.py to tst_ncs_search.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_restraints.py to tst_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_ncs_utils.py to tst_ncs_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_mtz2map.py to tst_mtz2map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_domains_from_pae.py to tst_domains_from_pae.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_models_to_from_chains.py to tst_models_to_from_chains.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_rigid_bond_test.py to tst_rigid_bond_test.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_dynamics_cli.py to tst_dynamics_cli.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_map_model_cc.py to tst_map_model_cc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_examples.py to tst_examples.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_sort_hetatms.py to tst_sort_hetatms.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_find_ss_structure.py to tst_find_ss_structure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_clashes.py to tst_clashes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_minimize_chain.py to tst_minimize_chain.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_fmodel_2.py to tst_fmodel_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_special_term_at_end.py to tst_special_term_at_end.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_scattering_type_registry.py to tst_scattering_type_registry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_metal_link_1.py to tst_metal_link_1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_fmodel_fd.py to tst_fmodel_fd.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_psi_phi_extraction.py to tst_psi_phi_extraction.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder_box.py to tst_polder_box.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_fmodel_no_cryst1.py to tst_fmodel_no_cryst1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_validation_summary.py to tst_validation_summary.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_altloc_remediate.py to tst_altloc_remediate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_reduce.py to tst_reduce.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_sampled_model_density.py to tst_sampled_model_density.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_anomalous_substructure.py to tst_anomalous_substructure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_superpose.py to tst_superpose.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_validate_mg.py to tst_validate_mg.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pick_approx_zn.py to tst_pick_approx_zn.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_validate_ca.py to tst_validate_ca.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_geometries.py to tst_geometries.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/geometry.py to geometry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/identify.py to identify.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/environment.py to environment.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pick_k.py to tst_pick_k.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pick_ca_svm.py to tst_pick_ca_svm.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pickle.py to tst_pickle.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_environment.py to tst_environment.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm/dump_sites.py to dump_sites.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm/tst_classifier.py to tst_classifier.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_symmetry_axis.py to tst_symmetry_axis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_parameters.py to tst_parameters.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/build.py to build.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pick_ca.py to tst_pick_ca.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pick_mg.py to tst_pick_mg.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/halides.py to halides.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/process_predicted_model.py to process_predicted_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/tst_segid.py to tst_segid.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/ss_validation.py to ss_validation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/secondary_structure_params.py to secondary_structure_params.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/tst_insertion_codes.py to tst_insertion_codes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/proteins.py to proteins.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/find_ss_from_ca.py to find_ss_from_ca.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/regularize_from_pdb.py to regularize_from_pdb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/nucleic_acids.py to nucleic_acids.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/tst_2.py to tst_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/ss_idealization.py to ss_idealization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/tst_3.py to tst_3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/tst_1.py to tst_1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/tst_io.py to tst_io.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/tst_ss_id_ncs.py to tst_ss_id_ncs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rsr/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rsr/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/altloc.py to altloc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/topology.py to topology.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/clash.py to clash.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/shared_types.py to shared_types.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/sphere_surface_sampling.py to sphere_surface_sampling.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/asa.py to asa.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/indexing.py to indexing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/restraints.py to restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/ramachandran_eval.py to ramachandran_eval.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/tst_geostd_vs_sidechain_angles_props.py to tst_geostd_vs_sidechain_angles_props.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/nqh.py to nqh.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/ramachandran_eval_deprecated.py to ramachandran_eval_deprecated.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/graphics.py to graphics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/tst_rotamer_eval.py to tst_rotamer_eval.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/rotamer_eval.py to rotamer_eval.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/n_dim_table.py to n_dim_table.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/sidechain_angles.py to sidechain_angles.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/cif_triage.py to cif_triage.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_metal_coordination.py to tst_metal_coordination.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_cif_triage.py to tst_cif_triage.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_correct_hydrogens.py to tst_correct_hydrogens.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/idealized_aa.py to idealized_aa.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_selection.py to tst_selection.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_chg.py to tst_chg.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_geo_reduce_for_tardy.py to tst_geo_reduce_for_tardy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_rna_dna_interpretation.py to tst_rna_dna_interpretation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/pdb_interpretation.py to pdb_interpretation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/populate_auto_linking_origin_ids.py to populate_auto_linking_origin_ids.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_ncs_processing.py to tst_pdb_interpretation_ncs_processing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_tyr_from_gly_and_bnz.py to tst_tyr_from_gly_and_bnz.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_iron_sulfur_clusters.py to tst_iron_sulfur_clusters.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/correct_hydrogen_geometries.py to correct_hydrogen_geometries.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_glyco_coordination.py to tst_glyco_coordination.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_cif_types.py to tst_cif_types.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_superpose_ideal.py to tst_superpose_ideal.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/server.py to server.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/rotamer_utils.py to rotamer_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_rotamer_utils.py to tst_rotamer_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/linking_mixins.py to linking_mixins.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/conformation_dependent_restraints.py to conformation_dependent_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/linking_setup.py to linking_setup.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_protein_interpretation.py to tst_protein_interpretation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/cif_types.py to cif_types.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_carbo_linking.py to tst_carbo_linking.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_linking.py to tst_linking.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_idealized_aa.py to tst_idealized_aa.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/rna_sugar_pucker_analysis.py to rna_sugar_pucker_analysis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/glyco_chiral_values.py to glyco_chiral_values.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/glyco_utils.py to glyco_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/hydrogen_restrictions.py to hydrogen_restrictions.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_paral_geo.py to tst_paral_geo.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_all_cif_files.py to tst_all_cif_files.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation.py to tst_pdb_interpretation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_neutron_distance.py to tst_neutron_distance.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_3.py to tst_pdb_interpretation_3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_deuterium_terminii.py to tst_deuterium_terminii.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_2.py to tst_pdb_interpretation_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_server.py to tst_server.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/conv_v2_v3.py to conv_v2_v3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/linking_utils.py to linking_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_glyco_hand.py to tst_glyco_hand.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_rna_sugar_pucker_analysis.py to tst_rna_sugar_pucker_analysis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_motif.py to tst_motif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/bondlength_defaults.py to bondlength_defaults.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py to pdb_distances.cpython-312.pyc /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:777: SyntaxWarning: invalid escape sequence '\d' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:779: SyntaxWarning: invalid escape sequence '\w' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:816: SyntaxWarning: invalid escape sequence '\d' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:823: SyntaxWarning: invalid escape sequence '\d' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:1191: SyntaxWarning: invalid escape sequence '\d' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:1194: SyntaxWarning: invalid escape sequence '\d' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:1499: SyntaxWarning: invalid escape sequence '\d' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:1501: SyntaxWarning: invalid escape sequence '\d' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:1503: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:1505: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:1823: SyntaxWarning: invalid escape sequence '\d' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:1825: SyntaxWarning: invalid escape sequence '\d' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:1879: SyntaxWarning: invalid escape sequence '\/' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:1988: SyntaxWarning: invalid escape sequence '\d' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:1991: SyntaxWarning: invalid escape sequence '\d' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:2318: SyntaxWarning: invalid escape sequence '\d' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:2324: SyntaxWarning: invalid escape sequence '\d' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:2892: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:2979: SyntaxWarning: invalid escape sequence '\d' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:2981: SyntaxWarning: invalid escape sequence '\w' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/cbd_utils.py to cbd_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/barbed_wire_analysis.py to barbed_wire_analysis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/analyze_peptides.py to analyze_peptides.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/waters.py to waters.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ligands.py to ligands.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/cbetadev.py to cbetadev.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/model_properties.py to model_properties.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ensembles.py to ensembles.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/mean_devs_VAL_THR_ILE_phi_psi.py to mean_devs_VAL_THR_ILE_phi_psi.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/comparama.py to comparama.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/chain_comparison.py to chain_comparison.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/evalurama.py to evalurama.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/probescore_ligand.py to probescore_ligand.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/mp_geo.py to mp_geo.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/kinemage_templates.py to kinemage_templates.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/datasets.py to datasets.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_experimental.py to tst_experimental.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_waters.py to tst_waters.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_mp_geo_endtoend.py to tst_mp_geo_endtoend.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_find_region_max_value.py to tst_find_region_max_value.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_omegalyze.py to tst_omegalyze.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_mp_validate_bonds.py to tst_mp_validate_bonds.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_rama_z_01.py to tst_rama_z_01.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_chiral_validation.py to tst_chiral_validation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_mp_geo.py to tst_mp_geo.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/run_restraints.py to run_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_cablam.py to tst_cablam.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_undowser.py to tst_undowser.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_keep_hydrogens.py to tst_keep_hydrogens.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_do_flips_clashscore.py to tst_do_flips_clashscore.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_2.py to tst_molprobity_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_rna_validate.py to tst_rna_validate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_rama_z_02.py to tst_rama_z_02.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_clashscore.py to tst_clashscore.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_model_properties.py to tst_model_properties.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_mp_geo_chiral_volume_cases.py to tst_mp_geo_chiral_volume_cases.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_1.py to tst_molprobity_1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_restraints.py to tst_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_ramalyze2.py to tst_ramalyze2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_cbetadev.py to tst_cbetadev.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_suitename.py to tst_suitename.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_5.py to tst_molprobity_5.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_arguments.py to tst_molprobity_arguments.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_symmetry_SS.py to tst_symmetry_SS.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_cbetadev_02.py to tst_cbetadev_02.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_ramalyze.py to tst_ramalyze.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_3.py to tst_molprobity_3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_clashscore_2.py to tst_clashscore_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_hydrogen_addition_clashscore.py to tst_hydrogen_addition_clashscore.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_4.py to tst_molprobity_4.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_cablam_2.py to tst_cablam_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_rotalyze.py to tst_rotalyze.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/mp_validate_bonds.py to mp_validate_bonds.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/restraints.py to restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/graphics.py to graphics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ramalyze.py to ramalyze.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/sequence.py to sequence.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/cablam.py to cablam.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ramachandran/convert_from_text.py to convert_from_text.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ramachandran/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/experimental.py to experimental.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/mean_devs_others_phi_psi.py to mean_devs_others_phi_psi.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/fav_lists.py to fav_lists.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/comprehensive_residue.py to comprehensive_residue.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/undowser.py to undowser.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/rna_validate.py to rna_validate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/rotalyze.py to rotalyze.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/rama_z.py to rama_z.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/clashscore.py to clashscore.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/omegalyze.py to omegalyze.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/validate_ligands.py to validate_ligands.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/convert_lists.py to convert_lists.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/mean_devs_PRO_phi_psi.py to mean_devs_PRO_phi_psi.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_05.py to tst_05.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_02.py to tst_02.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/pair_interaction.py to pair_interaction.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_00.py to tst_00.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_04.py to tst_04.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_01.py to tst_01.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_03.py to tst_03.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/atom_selection.py to atom_selection.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/arginine_geometry.py to arginine_geometry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/ss_validation.py to ss_validation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/barbed_wire_analysis.py to barbed_wire_analysis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/reduce2.py to reduce2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/ss_idealization.py to ss_idealization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/probescore_ligand.py to probescore_ligand.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/quantum_interface.py to quantum_interface.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/cbetadev.py to cbetadev.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/ntc_validation.py to ntc_validation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/suitename_old.py to suitename_old.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/polder.py to polder.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/probe2.py to probe2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/prepare_pdb_deposition.py to prepare_pdb_deposition.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/comparama.py to comparama.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/evalurama.py to evalurama.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rna_validate_puckers.py to rna_validate_puckers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rna_validate_suites.py to rna_validate_suites.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/process_predicted_model.py to process_predicted_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/mp_validate_bonds.py to mp_validate_bonds.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/emringer.py to emringer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/water_b_factors.py to water_b_factors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/mask.py to mask.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/ramalyze.py to ramalyze.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/chiral_validation.py to chiral_validation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/cablam.py to cablam.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/hydrogenate.py to hydrogenate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/cablam_idealization.py to cablam_idealization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/suitename.py to suitename.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/undowser.py to undowser.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rna_validate.py to rna_validate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/pdbtools.py to pdbtools.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rotalyze.py to rotalyze.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rna_validate_bonds.py to rna_validate_bonds.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/pdb_as_cif.py to pdb_as_cif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rama_z.py to rama_z.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/hbond.py to hbond.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/nonbonded_overlaps.py to nonbonded_overlaps.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/clashscore.py to clashscore.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/omegalyze.py to omegalyze.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/validate_ligands.py to validate_ligands.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/arrays.py to arrays.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model_info.py to f_model_info.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/proq2.py to proq2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py to tst_rigid_body_groups_from_pdb_chains.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_refinement_flags.py to tst_refinement_flags.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_real_space_simple.py to tst_real_space_simple.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_select_best_starting_model.py to tst_select_best_starting_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_anomalous_scatterer_groups.py to tst_anomalous_scatterer_groups.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/rigid_body.py to rigid_body.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/print_statistics.py to print_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tardy.py to tardy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/targets.py to targets.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/select_best_starting_model.py to select_best_starting_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_misc.py to tst_misc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/minimization.py to minimization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/refinement_flags.py to refinement_flags.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/geometry_minimization.py to geometry_minimization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/adp_refinement.py to adp_refinement.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/group.py to group.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_group.py to tst_group.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/inspect_tardy_trajectory.py to inspect_tardy_trajectory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_rigid_body.py to tst_rigid_body.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/fit_his.py to fit_his.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/fit_water.py to fit_water.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_1H.py to tst_fit_residues_1H.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/individual_sites.py to individual_sites.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/flipbase.py to flipbase.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_weight.py to tst_weight.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_2.py to tst_fit_residues_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_3.py to tst_individual_sites_3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_0.py to tst_fit_residue_0.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_aa_residue_axes_and_clusters.py to tst_aa_residue_axes_and_clusters.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/rigid_body.py to rigid_body.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_selection.py to tst_fit_residues_selection.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_1.py to tst_fit_residues_1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_flipbase.py to tst_flipbase.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_3.py to tst_fit_residues_3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_monitor.py to tst_monitor.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_5.py to tst_fit_residue_5.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_1.py to tst_individual_sites_1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_rigid_body.py to tst_rigid_body.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/fit_residue.py to fit_residue.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/weight.py to weight.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_1H.py to tst_fit_residue_1H.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_7.py to tst_fit_residue_7.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_0H.py to tst_fit_residue_0H.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/adp.py to adp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/fit_small_molecule.py to fit_small_molecule.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_4.py to tst_fit_residue_4.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_2.py to tst_individual_sites_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/explode_and_refine.py to explode_and_refine.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_4.py to tst_fit_residues_4.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_1.py to tst_fit_residue_1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_6.py to tst_fit_residues_6.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_water.py to tst_fit_water.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/occupancy.py to occupancy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_6.py to tst_fit_residue_6.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/fit_residues.py to fit_residues.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_5.py to tst_fit_residues_5.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_2.py to tst_fit_residue_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_3.py to tst_fit_residue_3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_group_2.py to tst_group_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/flip_peptide_side_chain.py to flip_peptide_side_chain.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/wx_tardy_pdb.py to wx_tardy_pdb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/orca.py to orca.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/weights_params.py to weights_params.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/minimization_ncs_constraints.py to minimization_ncs_constraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/anomalous_scatterer_groups.py to anomalous_scatterer_groups.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_fit_rotamers.py to tst_fit_rotamers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/energy_monitor.py to energy_monitor.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement/ensemble_probability.py to ensemble_probability.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement/ensemble_utils.py to ensemble_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/minimization_monitor.py to minimization_monitor.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/occupancies.py to occupancies.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_occupancy_selections.py to tst_occupancy_selections.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/electrons.py to electrons.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/tst_ready_set_utils.py to tst_ready_set_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/xtal_screens.py to xtal_screens.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/tst_xtal_screens.py to tst_xtal_screens.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/ready_set_basics.py to ready_set_basics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/chemistry.py to chemistry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/hierarchy_utils.py to hierarchy_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/rdkit_utils.py to rdkit_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/ready_set_utils.py to ready_set_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/msa.py to msa.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/massage_twin_detwin_data.py to massage_twin_detwin_data.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_bayesian_estimator.py to tst_bayesian_estimator.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/relative_scaling.py to relative_scaling.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/fa_estimation.py to fa_estimation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/xtriage.py to xtriage.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/fest.py to fest.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/bayesian_estimator.py to bayesian_estimator.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/pair_analyses.py to pair_analyses.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/mean_f_rms_f.py to mean_f_rms_f.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_massage_data.py to tst_massage_data.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/rip_scale.py to rip_scale.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_plan_sad_experiment.py to tst_plan_sad_experiment.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_mean_f_rms_f.py to tst_mean_f_rms_f.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_scaling.py to tst_scaling.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/twmad_scale.py to twmad_scale.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/absolute_scaling.py to absolute_scaling.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/data_statistics.py to data_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_xtriage_twin_analyses.py to tst_xtriage_twin_analyses.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/pre_scale.py to pre_scale.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/matthews.py to matthews.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/twin_analyses.py to twin_analyses.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/make_param.py to make_param.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/absence_likelihood.py to absence_likelihood.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/siras_scale.py to siras_scale.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/relative_wilson.py to relative_wilson.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_outlier.py to tst_outlier.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/ta_alpha_beta_calc.py to ta_alpha_beta_calc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/thorough_outlier_test.py to thorough_outlier_test.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_sigmaa.py to tst_sigmaa.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/outlier_plots.py to outlier_plots.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_xtriage.py to tst_xtriage.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/remove_outliers.py to remove_outliers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_absences.py to tst_absences.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/basic_analyses.py to basic_analyses.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/sad_scale.py to sad_scale.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/absences.py to absences.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/sigmaa_estimation.py to sigmaa_estimation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/plan_sad_experiment.py to plan_sad_experiment.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/random_omit.py to random_omit.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/sir_scale.py to sir_scale.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/outlier_rejection.py to outlier_rejection.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/superpose.py to superpose.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/atomic_environment_vectors/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/atomic_environment_vectors/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/tncs.py to tncs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ligands.py to ligands.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ncs.py to ncs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/cartesian_restraints.py to cartesian_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ncs_restraints_group_list.py to ncs_restraints_group_list.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ncs_params.py to ncs_params.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ncs_search.py to ncs_search.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ncs_utils.py to ncs_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/lattice.py to lattice.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/xmanip.py to xmanip.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/clashes.py to clashes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/qm_manager.py to qm_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/tst_c_beta_restraints.py to tst_c_beta_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/tst_reference_coordinate.py to tst_reference_coordinate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/quantum_interface.py to quantum_interface.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/geo_file_parsing.py to geo_file_parsing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/tst_manager.py to tst_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/mopac_manager.py to mopac_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/ramachandran.py to ramachandran.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/c_beta.py to c_beta.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/afitt.py to afitt.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/tst_ramachandran.py to tst_ramachandran.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py to tst_reference_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py to tst_torsion_ncs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py to torsion_ncs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/reference_model.py to reference_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py to rotamer_search.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py to tst_reference_model_ligands.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/orca_manager.py to orca_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/tst_reference_coordinate2.py to tst_reference_coordinate2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/tst_geo_file_parsing.py to tst_geo_file_parsing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/quantum_restraints_manager.py to quantum_restraints_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/qi_utils.py to qi_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/reference.py to reference.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/base_qm_manager.py to base_qm_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/external.py to external.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe/CompareOriginalAndNewProbeAtomInfo.py to CompareOriginalAndNewProbeAtomInfo.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe/Helpers.py to Helpers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe/tst_mmtbx_probe_ext.py to tst_mmtbx_probe_ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe/AtomTypes.py to AtomTypes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ias/tst_ias.py to tst_ias.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ias/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks/tst_asu_mask.py to tst_asu_mask.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks/tst_masks.py to tst_masks.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/find_tls_groups.py to find_tls_groups.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fix_rotamer_outliers.py to fix_rotamer_outliers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/estimate_bijvoet_ratio.py to estimate_bijvoet_ratio.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/show_r_factors_by_shell.py to show_r_factors_by_shell.cpython-312.pyc /usr/lib/python3.12/dist-packages/mmtbx/command_line/show_r_factors_by_shell.py:106: SyntaxWarning: invalid escape sequence '\(' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/flipbase.py to flipbase.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/grow_density.py to grow_density.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/arginine_geometry.py to arginine_geometry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/extend_sidechains.py to extend_sidechains.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/table_one.py to table_one.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/maximum_entropy_map.py to maximum_entropy_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/barbed_wire_analysis.py to barbed_wire_analysis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/development_fem.py to development_fem.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/model_vs_sequence.py to model_vs_sequence.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/reduce2.py to reduce2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/validate_ions.py to validate_ions.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/super.py to super.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cablam_training.py to cablam_training.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/analyze_peptides.py to analyze_peptides.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/monomer_library.comp_as_motif.py to monomer_library.comp_as_motif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/ss_idealization.py to ss_idealization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/maps.py to maps.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/pdb_atom_selection.py to pdb_atom_selection.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/xtriage.py to xtriage.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/probescore_ligand.py to probescore_ligand.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/real_space_correlation.py to real_space_correlation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/quantum_interface.py to quantum_interface.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/secondary_structure_validation.py to secondary_structure_validation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/prune_model.py to prune_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fest.py to fest.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/tls_as_xyz.py to tls_as_xyz.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/tls_analysis.py to tls_analysis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/models_as_chains.py to models_as_chains.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/mp_geo.py to mp_geo.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/development.aev.py to development.aev.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/validate_waters.py to validate_waters.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/pdb_interpretation.py to pdb_interpretation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/select_best_starting_model.py to select_best_starting_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/search_pdb_symmetry.py to search_pdb_symmetry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/sisa.py to sisa.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rigid_bond_test.py to rigid_bond_test.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/model_map.py to model_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cbetadev.py to cbetadev.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/analyze_static_disorder.py to analyze_static_disorder.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/ntc_validation.py to ntc_validation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/model_model_distances.py to model_model_distances.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/suitename_old.py to suitename_old.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/partial_omit_map.py to partial_omit_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/model_vs_data.py to model_vs_data.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/polder.py to polder.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/geometry_minimization.py to geometry_minimization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/simulate_low_res_data.py to simulate_low_res_data.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/emringer_score.py to emringer_score.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/pdb_view_ad_hoc.py to pdb_view_ad_hoc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/probe2.py to probe2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/prepare_pdb_deposition.py to prepare_pdb_deposition.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/get_related_ensemble.py to get_related_ensemble.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/validate_H_cl_app.py to validate_H_cl_app.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/density_modification.py to density_modification.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/f000.py to f000.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/matthews.py to matthews.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cdl_lookup.py to cdl_lookup.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/massage_data.py to massage_data.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/find_peaks_holes.py to find_peaks_holes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/r_factor_statistics.py to r_factor_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/comparama.py to comparama.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fake_f_obs.py to fake_f_obs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/evalurama.py to evalurama.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/molprobity.py to molprobity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fmodel.py to fmodel.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rna_validate_puckers.py to rna_validate_puckers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/compute_map_coefficients.py to compute_map_coefficients.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/anneal_real_space.py to anneal_real_space.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/afitt.py to afitt.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rna_validate_suites.py to rna_validate_suites.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/process_predicted_model.py to process_predicted_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/water_screen.py to water_screen.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/mp_validate_bonds.py to mp_validate_bonds.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/emringer.py to emringer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/ringer.py to ringer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/compare_ligands.py to compare_ligands.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/water_b_factors.py to water_b_factors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/mask.py to mask.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/ssm_rmsd_for_chains.py to ssm_rmsd_for_chains.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/find_residue_in_pdb.py to find_residue_in_pdb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/verify_mon_lib_data.py to verify_mon_lib_data.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rebuild_rotarama_cache.py to rebuild_rotarama_cache.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fetch_pdb.py to fetch_pdb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/ramalyze.py to ramalyze.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/chiral_validation.py to chiral_validation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/helix_sheet_recs_as_pdb_files.py to helix_sheet_recs_as_pdb_files.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cablam.py to cablam.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/hydrogenate.py to hydrogenate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cablam_idealization.py to cablam_idealization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/chains_as_models.py to chains_as_models.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/validation_summary.py to validation_summary.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/afitt_fd.py to afitt_fd.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/map_box.py to map_box.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fobs_minus_fobs_map.py to fobs_minus_fobs_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/refine_anomalous_substructure.py to refine_anomalous_substructure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rebuild_cablam_cache.py to rebuild_cablam_cache.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/superpose.py to superpose.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/tls.py to tls.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/map_to_structure_factors.py to map_to_structure_factors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/suitename.py to suitename.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/xmanip.py to xmanip.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/distance_difference.py to distance_difference.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cablam_validate.py to cablam_validate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/angle.py to angle.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/undowser.py to undowser.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/map_comparison.py to map_comparison.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fab_elbow_angle.py to fab_elbow_angle.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rna_validate.py to rna_validate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cif_as_mtz.py to cif_as_mtz.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/remove_outliers.py to remove_outliers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cc_star.py to cc_star.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/dynamics.py to dynamics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/pdbtools.py to pdbtools.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/kinemage.py to kinemage.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/apply_ncs_to_ligand.py to apply_ncs_to_ligand.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rotalyze.py to rotalyze.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/real_space_diff_map.py to real_space_diff_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/secondary_structure_restraints.py to secondary_structure_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rna_validate_bonds.py to rna_validate_bonds.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/model_vs_map.py to model_vs_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/mtz2map.py to mtz2map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/show_suspicious_residues.py to show_suspicious_residues.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rama_z.py to rama_z.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/hbond.py to hbond.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/nonbonded_overlaps.py to nonbonded_overlaps.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/model_idealization.py to model_idealization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rank_scale_map.py to rank_scale_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/altloc_remediate.py to altloc_remediate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/reciprocal_space_arrays.py to reciprocal_space_arrays.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/plan_sad_experiment.py to plan_sad_experiment.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/map_to_model_histogram.py to map_to_model_histogram.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/strip_model.py to strip_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/mon_lib_cif_triage.py to mon_lib_cif_triage.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/clashscore.py to clashscore.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/omegalyze.py to omegalyze.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/sort_hetatms.py to sort_hetatms.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/perigee.py to perigee.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fmodel_simple.py to fmodel_simple.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/validate_ligands.py to validate_ligands.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fix_rama_outliers.py to fix_rama_outliers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/cablam_training.py to cablam_training.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/cablam_res.py to cablam_res.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/cablam_align.py to cablam_align.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/cablam_fingerprints.py to cablam_fingerprints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/fingerprints/antiparallel_beta.py to antiparallel_beta.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/fingerprints/antiparallel_beta_bridge.py to antiparallel_beta_bridge.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/fingerprints/parallel_beta.py to parallel_beta.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/fingerprints/regular_helix_definitions.py to regular_helix_definitions.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/fingerprints/how_to.py to how_to.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/fingerprints/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/cablam_math.py to cablam_math.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/cablam_validate.py to cablam_validate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/find_peaks.py to find_peaks.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pdbtools.py to pdbtools.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik/tst_maxlik.py to tst_maxlik.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik/max_like_non_uniform.py to max_like_non_uniform.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik/tst_max_lik.py to tst_max_lik.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik/maxlik.py to maxlik.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci/data_filtering.py to data_filtering.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci/tst_hbond.py to tst_hbond.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci/skew_kurt_plot.py to skew_kurt_plot.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci/hbond.py to hbond.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/xmanip_tasks.py to xmanip_tasks.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce/InteractionGraph.py to InteractionGraph.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce/tst_mmtbx_reduce_ext.py to tst_mmtbx_reduce_ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce/Movers.py to Movers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce/Optimizers.py to Optimizers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues/sample_rotamers.py to sample_rotamers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues/all_his.py to all_his.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues/rotamer_manager.py to rotamer_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/simulated_annealing.py to simulated_annealing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/ensemble_cd.py to ensemble_cd.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/cartesian_dynamics.py to cartesian_dynamics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/constants.py to constants.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/tst_sa.py to tst_sa.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/tst_cartesian_dynamics.py to tst_cartesian_dynamics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/rcsb_web_services.py to rcsb_web_services.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/tst_rcsb_web_services.py to tst_rcsb_web_services.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/tst_standard_geometry_cif.py to tst_standard_geometry_cif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/standard_geometry_cif.py to standard_geometry_cif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pdb_symmetry.py to pdb_symmetry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/resolve_resources.py to resolve_resources.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_omega_cdl.py to tst_omega_cdl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_02.py to tst_mcl_02.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/nucleotides.py to nucleotides.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/multi_residue_cdl_class.py to multi_residue_cdl_class.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/mcl_sf4_coordination.py to mcl_sf4_coordination.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/investigate_rotamer_space.py to investigate_rotamer_space.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/omega.py to omega.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_cdl.py to tst_cdl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_cdl_esd.py to tst_cdl_esd.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/altloc_weighting.py to altloc_weighting.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_01.py to tst_mcl_01.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_rna_dna_fragments.py to tst_rna_dna_fragments.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/rdl_database.py to rdl_database.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/metal_coordination_library.py to metal_coordination_library.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/multi_base_class.py to multi_base_class.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/testing_utils.py to testing_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/bond_angle_registry.py to bond_angle_registry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/cdl_utils.py to cdl_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/pH_dependent_restraints.py to pH_dependent_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/mcl.py to mcl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/hpdl_database.py to hpdl_database.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/rotamers.py to rotamers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/density_dependent_restraints.py to density_dependent_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_03.py to tst_mcl_03.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/cdl_setup.py to cdl_setup.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/check_cdl_database.py to check_cdl_database.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/cdl_database.py to cdl_database.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_rdl.py to tst_rdl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_hpdl.py to tst_hpdl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_cdl_nucleotides.py to tst_cdl_nucleotides.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_pH_mechanism.py to tst_pH_mechanism.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/LinkedResidues.py to LinkedResidues.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/hydrogen_bonding.py to hydrogen_bonding.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_multi_residue_rna.py to tst_multi_residue_rna.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/cdl_svl_database.py to cdl_svl_database.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/histidines.py to histidines.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/omega_database.py to omega_database.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_poly_ca_multi_residue.py to tst_poly_ca_multi_residue.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/multi_residue_class.py to multi_residue_class.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_cis_c_n_ca.py to tst_cis_c_n_ca.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/sf4_restraints.py to sf4_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_mutli_residue.py to tst_mutli_residue.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/density_modification/tst_density_modification.py to tst_density_modification.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/density_modification/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/tst_em_rscc.py to tst_em_rscc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/em_rolling.py to em_rolling.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/em_rscc.py to em_rscc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/tst_emringer.py to tst_emringer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/emringer.py to emringer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/em_scoring.py to em_scoring.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cli_parser.py to cli_parser.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/simple_parser.py to simple_parser.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ranges.py to ranges.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/table_one.py to table_one.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_plots.py to data_plots.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/map_tools.py to map_tools.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/reflection_file_converter.py to reflection_file_converter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/tst_detectors.py to tst_detectors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/npy.py to npy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/adsc.py to adsc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/macscience.py to macscience.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/adsc_minicbf.py to adsc_minicbf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/edf.py to edf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/noir.py to noir.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/dtrek.py to dtrek.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/hamamatsu.py to hamamatsu.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/pilatus_slice.py to pilatus_slice.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/tst_debug_write.py to tst_debug_write.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/active_area_filter.py to active_area_filter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/image_from_http_request.py to image_from_http_request.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/tst_adsc.py to tst_adsc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/util/filters.py to filters.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/util/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/beam_center_convention.py to beam_center_convention.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/tst_py_cbf.py to tst_py_cbf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/cspad_detector_formats.py to cspad_detector_formats.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/url_support.py to url_support.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/raxis_nonsquare.py to raxis_nonsquare.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/marIP.py to marIP.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/config_detector.py to config_detector.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/endstation_max_iv_trial.py to endstation_max_iv_trial.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/endstation.py to endstation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/spot_xy_convention.py to spot_xy_convention.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/camera_convention.py to camera_convention.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/eiger.py to eiger.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/adsc_module.py to adsc_module.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/saturn.py to saturn.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/generic_detector.py to generic_detector.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/cbf.py to cbf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/bruker.py to bruker.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/tst_cbf_comp_read_meth.py to tst_cbf_comp_read_meth.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/mar.py to mar.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/test_raxis2.py to test_raxis2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/test_mar.py to test_mar.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/eiger_minicbf.py to eiger_minicbf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/pilatus_minicbf.py to pilatus_minicbf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/detectorbase.py to detectorbase.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/raxis.py to raxis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/raxisbase.py to raxisbase.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/tst_mtz_free_flipper.py to tst_mtz_free_flipper.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_hierarchy.py to pdb_hierarchy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/prepare_model_for_rsr.py to prepare_model_for_rsr.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_symmetry_copies.py to pdb_symmetry_copies.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/direct_methods_light.py to direct_methods_light.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/recalculate_phenix_refine_r_factors.py to recalculate_phenix_refine_r_factors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_split_chains.py to pdb_split_chains.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdbx_mmcif_tutorial.py to pdbx_mmcif_tutorial.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_tardy_conf_sampling_simple.py to pdb_tardy_conf_sampling_simple.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/mtz_convert_free_to_work.py to mtz_convert_free_to_work.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_to_map_simple.py to pdb_to_map_simple.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/mtz_free_flipper.py to mtz_free_flipper.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_shake.py to pdb_shake.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/shelx_latt_sym_to_space_group_symbol.py to shelx_latt_sym_to_space_group_symbol.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/libtbx_phil_examples.py to libtbx_phil_examples.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pymol.py to pymol.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/merge.py to merge.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/crystal_symmetry_from_hkl.py to crystal_symmetry_from_hkl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/space_group_dictionary.py to space_group_dictionary.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/tst_merge.py to tst_merge.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/tst_no_merge_original_index.py to tst_no_merge_original_index.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/no_merge_original_index.py to no_merge_original_index.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek/dtrek_symmetry_dict.py to dtrek_symmetry_dict.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek/reflnlist_reader.py to reflnlist_reader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek/crystal_symmetry_from_ref.py to crystal_symmetry_from_ref.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/format.py to format.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve/fpfm_reader.py to fpfm_reader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve/crystal_symmetry_from_inp.py to crystal_symmetry_from_inp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/reflection_file_editor.py to reflection_file_editor.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/map_model_manager.py to map_model_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/crystal_symmetry_from_any.py to crystal_symmetry_from_any.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/reflection_file_reader.py to reflection_file_reader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_rna_dna_atom_names.py to tst_rna_dna_atom_names.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/modified_aa_names.py to modified_aa_names.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/atom_selection.py to atom_selection.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remark_290_interpretation.py to remark_290_interpretation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/misc_records_output.py to misc_records_output.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_secondary_structure_2.py to tst_secondary_structure_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_hierarchy_atom_sort.py to tst_hierarchy_atom_sort.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/hybrid_36.py to hybrid_36.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/records.py to records.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_read_mtrix_records_from_cif.py to tst_read_mtrix_records_from_cif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_atom_selection_string.py to tst_atom_selection_string.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/extract_rfactors_resolutions_sigma.py to extract_rfactors_resolutions_sigma.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/secondary_structure.py to secondary_structure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_hierarchy.py to tst_hierarchy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/atom_name_interpretation.py to atom_name_interpretation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/xray_structure.py to xray_structure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/cryst1_interpretation.py to cryst1_interpretation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/nucleic_acid_codes.py to nucleic_acid_codes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_tls.py to tst_tls.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/utils.py to utils.cpython-312.pyc /usr/lib/python3.12/dist-packages/iotbx/pdb/utils.py:7: SyntaxWarning: invalid escape sequence '\{' /usr/lib/python3.12/dist-packages/iotbx/pdb/utils.py:45: SyntaxWarning: invalid escape sequence '\/' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_atom_selection.py to tst_atom_selection.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py to tst_extract_rfactors_resolutions_sigma.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_atom_name_interpretation.py to tst_atom_name_interpretation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_pdb.py to tst_pdb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/crystal_symmetry_from_pdb.py to crystal_symmetry_from_pdb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_mmcif_hierarchy_2.py to tst_mmcif_hierarchy_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_hierarchy_flip_symmetric.py to tst_hierarchy_flip_symmetric.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_mmcif_hierarchy.py to tst_mmcif_hierarchy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation/remediator.py to remediator.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation/tst_remediator.py to tst_remediator.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/amino_acid_codes.py to amino_acid_codes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/forward_compatible_pdb_cif_conversion.py to forward_compatible_pdb_cif_conversion.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/pdbe.py to pdbe.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/mmcif.py to mmcif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/modified_rna_dna_names.py to modified_rna_dna_names.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/hierarchy.py to hierarchy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/pdb_v3_cif_conversion.py to pdb_v3_cif_conversion.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/aa_utils.py to aa_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/fetch.py to fetch.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_mmcif.py to tst_mmcif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_secondary_structure.py to tst_secondary_structure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/rcsb.py to rcsb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_hierarchy_flip_symmetric_2.py to tst_hierarchy_flip_symmetric_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/experiment_type.py to experiment_type.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/download.py to download.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remark_2_interpretation.py to remark_2_interpretation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remark_3_interpretation.py to remark_3_interpretation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/web_service_api.py to web_service_api.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/rna_dna_detection.py to rna_dna_detection.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/phil.py to phil.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/validation.py to validation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/errors.py to errors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/geometry.py to geometry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/citations.py to citations.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/crystal_symmetry_from_cif.py to crystal_symmetry_from_cif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/restraints.py to restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/builders.py to builders.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/model.py to model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/cod_tools.py to cod_tools.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/restraint_file_merge.py to restraint_file_merge.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/logfiles.py to logfiles.cpython-312.pyc /usr/lib/python3.12/dist-packages/iotbx/logfiles.py:19: SyntaxWarning: invalid escape sequence '\%' /usr/lib/python3.12/dist-packages/iotbx/logfiles.py:474: SyntaxWarning: invalid escape sequence '\d' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/builders_depending_on_smtbx.py to builders_depending_on_smtbx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber/strudat.py to strudat.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber/tst_strudat.py to tst_strudat.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_pdb_link_records.py to tst_pdb_link_records.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_long_resname_1.py to tst_hierarchy_long_resname_1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_forward_compatible_pdb.py to tst_hierarchy_forward_compatible_pdb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_cif_1.py to tst_cif_1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_tools.py to tst_map_tools.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_xray_scale.py to tst_xray_scale.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_pdb_as_cif.py to tst_pdb_as_cif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_sort_atoms.py to tst_sort_atoms.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_poscar.py to tst_poscar.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_reindex.py to tst_reindex.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_pdb_v3.py to tst_hierarchy_pdb_v3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_crystal_symmetry_from_any.py to tst_crystal_symmetry_from_any.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_long_chain_ids_1.py to tst_hierarchy_long_chain_ids_1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_phil.py to tst_phil.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_restraints_merge.py to tst_restraints_merge.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_call_consistency.py to tst_map_model_manager_call_consistency.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_selected_hierarchy_flip.py to tst_selected_hierarchy_flip.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_miller_sort_asu.py to tst_miller_sort_asu.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_cif_as_pdb_1atom.py to tst_cif_as_pdb_1atom.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_wildcard.py to tst_wildcard.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_model_sharpening_5.py to tst_map_model_manager_model_sharpening_5.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_2.py to tst_map_model_manager_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_phases.py to tst_phases.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_external_sharpening_7.py to tst_map_model_manager_external_sharpening_7.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_occupancies_rounding.py to tst_hierarchy_occupancies_rounding.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_mtz_as_cif.py to tst_mtz_as_cif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_pdbx_mmcif_tutorial.py to tst_pdbx_mmcif_tutorial.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_copy_select.py to tst_hierarchy_copy_select.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_group_rounding.py to tst_group_rounding.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_reflection_statistics.py to tst_reflection_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_simple_parser.py to tst_simple_parser.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_4.py to tst_map_model_manager_4.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_patterson.py to tst_patterson.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_atom_selections_10k.py to tst_atom_selections_10k.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_reflection_file_reader.py to tst_reflection_file_reader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_split_data_cif.py to tst_split_data_cif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_lattice_symmetry.py to tst_lattice_symmetry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_long_resname_4.py to tst_hierarchy_long_resname_4.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_fetch.py to tst_fetch.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_generate_n_char_string.py to tst_generate_n_char_string.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_id_str.py to tst_hierarchy_id_str.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_pdb_cif_inputs.py to tst_pdb_cif_inputs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_data_manager.py to tst_data_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_merging_statistics.py to tst_merging_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_export_scalepack_unmerged.py to tst_export_scalepack_unmerged.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_simple_map_coefficients.py to tst_simple_map_coefficients.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_manager_wrapping.py to tst_map_manager_wrapping.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_user_selections.py to tst_ncs_user_selections.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py to tst_mtrix_biomt_cmdl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs.py to tst_ncs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_input.py to tst_ncs_input.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_groups_preprocessing.py to tst_ncs_groups_preprocessing.cpython-312.pyc /usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_groups_preprocessing.py:409: SyntaxWarning: invalid escape sequence '\P' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_search_ligs.py to tst_ncs_search_ligs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_mmcif_biomt_reduction_output.py to tst_mmcif_biomt_reduction_output.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_reordered_chains.py to tst_ncs_reordered_chains.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_search_broken_chain.py to tst_ncs_search_broken_chain.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_without_validation.py to tst_ncs_without_validation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_long_resname_2.py to tst_hierarchy_long_resname_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_bioinformatics.py to tst_bioinformatics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_file_reader.py to tst_file_reader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_csv_utils.py to tst_csv_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_3.py to tst_map_model_manager_3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_manager.py to tst_map_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_data_plots.py to tst_data_plots.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_examples.py to tst_examples.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_mmcif_multimodel.py to tst_mmcif_multimodel.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager.py to tst_map_model_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_long_resname_3.py to tst_hierarchy_long_resname_3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_box_around_molecule.py to tst_box_around_molecule.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_extract_xtal_data.py to tst_extract_xtal_data.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_cli_parser.py to tst_cli_parser.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_tls_from_map_8.py to tst_map_model_manager_tls_from_map_8.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_reflection_file_utils.py to tst_reflection_file_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_add_conformations.py to tst_add_conformations.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_split_models.py to tst_split_models.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_all_chain_ids.py to tst_all_chain_ids.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_show_systematic_absences.py to tst_show_systematic_absences.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_pdb_as_fasta.py to tst_pdb_as_fasta.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_mmcif_segids.py to tst_mmcif_segids.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_mmcif_to_from_hierarchy.py to tst_mmcif_to_from_hierarchy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py to tst_map_model_manager_half_map_sharpening_6.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py to tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_reflection_file_editor.py to tst_reflection_file_editor.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_symmetry.py to tst_symmetry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py to crystal_symmetry_from_ccp4_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mrcfile/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/poscar.py to poscar.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/symmetry.py to symmetry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs/split_data_cif.py to split_data_cif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs/box_around_molecule.py to box_around_molecule.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs/unique_with_biomt.py to unique_with_biomt.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/csv_utils.py to csv_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/phases.py to phases.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/file_reader.py to file_reader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/PrettyPrint/tables.py to tables.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/PrettyPrint/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/common.py to common.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/restraint.py to restraint.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/phil.py to phil.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/miller_array.py to miller_array.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/real_map.py to real_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/ncs_spec.py to ncs_spec.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/map_coefficients.py to map_coefficients.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/sequence.py to sequence.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/model.py to model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst_dano.py to tst_dano.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst_unmerged.py to tst_unmerged.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst_extract_from_symmetry_lib.py to tst_extract_from_symmetry_lib.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/crystal_symmetry_from_mtz.py to crystal_symmetry_from_mtz.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/extract_from_symmetry_lib.py to extract_from_symmetry_lib.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst_miller_dict.py to tst_miller_dict.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/merging_statistics.py to merging_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ncs/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/option_parser.py to option_parser.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/reflections.py to reflections.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/models.py to models.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/import_data_and_flags.py to import_data_and_flags.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/cif_conversions.py to cif_conversions.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif_mtz_data_labels.py to cif_mtz_data_labels.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map/crystal_symmetry_from_ccp4_map.py to crystal_symmetry_from_ccp4_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/ncbi_blast_xml.py to ncbi_blast_xml.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/xmlbuild.py to xmlbuild.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/local_blast.py to local_blast.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/alignment_as_hsearch.py to alignment_as_hsearch.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/homologues.py to homologues.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/pubmed.py to pubmed.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/pdb_info.py to pdb_info.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/ebi_wu_blast_xml.py to ebi_wu_blast_xml.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/structure.py to structure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.b_factor_stats.py to pdb.b_factor_stats.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/shelx.as_cif.py to shelx.as_cif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/mtz.dump.py to mtz.dump.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/show_distances.py to show_distances.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/reindex.py to reindex.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/split_data_cif.py to split_data_cif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cbf_read.py to cbf_read.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cns.transfer_crystal_symmetry.py to cns.transfer_crystal_symmetry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cns.reflection_reader.py to cns.reflection_reader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/isomorphous_difference_patterson.py to isomorphous_difference_patterson.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/xplor.map.show_summary.py to xplor.map.show_summary.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/reflection_file_converter.py to reflection_file_converter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cif.validate.py to cif.validate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.join_fragment_files.py to pdb.join_fragment_files.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.box_around_molecule.py to pdb.box_around_molecule.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/french_wilson.py to french_wilson.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/simple_map_coefficients.py to simple_map_coefficients.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/reflection_file_editor.py to reflection_file_editor.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cns.sdb_reader.py to cns.sdb_reader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/dano_as_amplitudes.py to dano_as_amplitudes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/crystal_symmetry_from_any.py to crystal_symmetry_from_any.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/reflection_file_reader.py to reflection_file_reader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_get_citation.py to pdb_get_citation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/shelx.dump_as_python.py to shelx.dump_as_python.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/shelx.as_xray_structure.py to shelx.as_xray_structure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.superpose_centers_of_mass.py to pdb.superpose_centers_of_mass.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_add_conformations.py to pdb_add_conformations.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.as_xray_structure.py to pdb.as_xray_structure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/phil.py to phil.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/reflection_statistics.py to reflection_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.print_sequence.py to pdb.print_sequence.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/mtrix_reconstruction.py to mtrix_reconstruction.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_as_fasta.py to pdb_as_fasta.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/export_scalepack_unmerged.py to export_scalepack_unmerged.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.hierarchy.py to pdb.hierarchy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.superpose_atoms_by_name.py to pdb.superpose_atoms_by_name.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/flip_symmetric_amino_acids.py to flip_symmetric_amino_acids.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/distance_least_squares.py to distance_least_squares.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/get_pubmed_citation.py to get_pubmed_citation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/build_phil_cache.py to build_phil_cache.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_remediator.py to pdb_remediator.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/biomt_reconstruction.py to biomt_reconstruction.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/file_reader.py to file_reader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/poscar_as_xray_structure.py to poscar_as_xray_structure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/sort_atoms.py to sort_atoms.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_labels_diff.py to pdb_labels_diff.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/detector_image_as_png.py to detector_image_as_png.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_show_connectivity.py to pdb_show_connectivity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cif_as_pdb.py to cif_as_pdb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/explore_metric_symmetry.py to explore_metric_symmetry.cpython-312.pyc /usr/lib/python3.12/dist-packages/iotbx/command_line/explore_metric_symmetry.py:339: SyntaxWarning: invalid escape sequence '\ ' /usr/lib/python3.12/dist-packages/iotbx/command_line/explore_metric_symmetry.py:341: SyntaxWarning: invalid escape sequence '\%' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/merging_statistics.py to merging_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/effective_resolution.py to effective_resolution.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/dtrek.to_cns.py to dtrek.to_cns.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/r_free_flags_as_cns.py to r_free_flags_as_cns.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/symmetry_search.py to symmetry_search.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/r_free_flags_accumulation.py to r_free_flags_accumulation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/emma.py to emma.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/lattice_symmetry.py to lattice_symmetry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/csv_as_mtz.py to csv_as_mtz.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.link_as_geometry_restraints_edits.py to pdb.link_as_geometry_restraints_edits.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cif.as_miller_arrays.py to cif.as_miller_arrays.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/r_free_flags_completion_simple.py to r_free_flags_completion_simple.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.insert_scale_records.py to pdb.insert_scale_records.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_labels_comparison.py to pdb_labels_comparison.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_split_models.py to pdb_split_models.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_as_cif.py to pdb_as_cif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/show_systematic_absences.py to show_systematic_absences.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/mtz_as_cif.py to mtz_as_cif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/blast_pdb.py to blast_pdb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cif.as_xray_structure.py to cif.as_xray_structure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cns_as_mtz.py to cns_as_mtz.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/unique_with_biomt.py to unique_with_biomt.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/patterson_map.py to patterson_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof/write_pcr.py to write_pcr.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof/read_pcr.py to read_pcr.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/builders.py to builders.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/wildcard.py to wildcard.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dsn6/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dsn6/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor/map.py to map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor/tst_xplormap.py to tst_xplormap.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor/ext.py to ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor/crystal_symmetry_from_map.py to crystal_symmetry_from_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/geometry.py to geometry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/xds_cbf.py to xds_cbf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/crystal_symmetry_from_hkl.py to crystal_symmetry_from_hkl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/integrate_hkl.py to integrate_hkl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/blank_cbf.py to blank_cbf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/xds_inp.py to xds_inp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/correction.py to correction.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/read_ascii.py to read_ascii.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/spot_xds.py to spot_xds.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/xparm.py to xparm.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/gain_cbf.py to gain_cbf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/reflection_file_utils.py to reflection_file_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/map_manager.py to map_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/crystal_symmetry_from_sdb.py to crystal_symmetry_from_sdb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/space_group_symbols.py to space_group_symbols.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/xray_structure.py to xray_structure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/sdb_writer.py to sdb_writer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/pdb_remarks.py to pdb_remarks.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/miller_array.py to miller_array.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/reflection_reader.py to reflection_reader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/crystal_symmetry_utils.py to crystal_symmetry_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/sdb_reader.py to sdb_reader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/crystal_symmetry_from_inp.py to crystal_symmetry_from_inp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/tst_cns.py to tst_cns.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/index_fobs_sigma_reader.py to index_fobs_sigma_reader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/extract_xtal_data.py to extract_xtal_data.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtrix_biomt.py to mtrix_biomt.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/tst_lex_parse_build.py to tst_lex_parse_build.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/crystal_symmetry_from_ins.py to crystal_symmetry_from_ins.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/errors.py to errors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/tokens.py to tokens.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/tst_hklf.py to tst_hklf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/lexer.py to lexer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/writer.py to writer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/write_ins.py to write_ins.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/parsers.py to parsers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/tst_fvar_encoding.py to tst_fvar_encoding.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/hklf.py to hklf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/tst_writer.py to tst_writer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/fvar_encoding.py to fvar_encoding.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/fcf.py to fcf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_program_template.py to tst_program_template.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/pyframe.py to pyframe.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_dlite.py to tst_dlite.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_path.py to tst_path.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_easy_mp_multicore.py to tst_easy_mp_multicore.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/xmlrpc_utils.py to xmlrpc_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/cli.py to cli.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/code_analysis.py to code_analysis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/subprocess_with_fixes.py to subprocess_with_fixes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/start_print_trace.py to start_print_trace.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/easy_pickle.py to easy_pickle.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/math_utils.py to math_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/objgraph.py to objgraph.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/dlite.py to dlite.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx/phil.py to phil.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx/python_string.py to python_string.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx/pubmed.py to pubmed.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/mp_handler.py to mp_handler.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/file_queue.py to file_queue.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/thread_handler.py to thread_handler.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/result.py to result.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/cluster_handler.py to cluster_handler.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/shared_resource.py to shared_resource.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/stacktrace.py to stacktrace.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/process_pool.py to process_pool.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/socket_queue.py to socket_queue.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/mainthread.py to mainthread.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/philgen.py to philgen.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/job_scheduler.py to job_scheduler.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/parallel_for.py to parallel_for.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/easy_mp.py to easy_mp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_representation.py to tst_representation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/citations.py to citations.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/copy_all.py to copy_all.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/copy_build_libtbx.py to copy_build_libtbx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/install_bat.py to install_bat.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/install_csh.py to install_csh.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/copy_runtime_sources.py to copy_runtime_sources.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/object_oriented_patterns.py to object_oriented_patterns.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_citations.py to tst_citations.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/topological_sort.py to topological_sort.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/scheduling_helpers.py to scheduling_helpers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/lsf.py to lsf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/remote.py to remote.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/polling.py to polling.cpython-312.pyc /usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/polling.py:282: SyntaxWarning: invalid escape sequence '\?' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/transfer.py to transfer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/errors.py to errors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/util.py to util.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/status.py to status.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/submission.py to submission.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/pbs_utils.py to pbs_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/scheduling.py to scheduling.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/looping.py to looping.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/communication.py to communication.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/generic.py to generic.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/sge_utils.py to sge_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/simplexml.py to simplexml.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/clusterTests.py to clusterTests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/log.py to log.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development/except_Exception.py to except_Exception.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development/xcode_build_phase.py to xcode_build_phase.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development/timers.py to timers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils/result.py to result.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils/statistics_info.py to statistics_info.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_binary_search.py to tst_binary_search.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_template.py to program_template.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/str_utils.py to str_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/subversion.py to subversion.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/version.py to version.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/path.py to path.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/pkg_utils.py to pkg_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_scheduling.py to tst_scheduling.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/wingide.py to wingide.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/xmlrpc_server_example.py to xmlrpc_server_example.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/crossmingw.py to crossmingw.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/metric_prefixes.py to metric_prefixes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_thread_utils.py to tst_thread_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/load_env.py to load_env.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_math_utils.py to tst_math_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/forward_compatibility.py to forward_compatibility.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils/parallel.py to parallel.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils/pytest.py to pytest.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/configure.py to configure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_xmlrpc_utils.py to tst_xmlrpc_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/callbacks.py to callbacks.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/complex_math.py to complex_math.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/easy_profile.py to easy_profile.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_find_unused_imports.py to tst_find_unused_imports.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/FileServer.py to FileServer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/SocketServer.py to SocketServer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/StartServer.py to StartServer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/FileClient.py to FileClient.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/FileSocket.py to FileSocket.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_str_utils.py to tst_str_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/mpi4py.py to mpi4py.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_topological_sort.py to tst_topological_sort.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/tst_experimental.py to tst_experimental.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/tokenizer.py to tokenizer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/gui_objects.py to gui_objects.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/tst_tokenizer.py to tst_tokenizer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/tst_interface.py to tst_interface.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/command_line.py to command_line.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/interface.py to interface.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/parser.py to parser.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/experimental.py to experimental.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/assert_utils.py to assert_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/table_utils.py to table_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/env_config.py to env_config.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/clear_paths.py to clear_paths.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/find_reference_cycles.py to find_reference_cycles.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/option_parser.py to option_parser.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/file_clutter.py to file_clutter.cpython-312.pyc /usr/lib/python3.12/dist-packages/libtbx/file_clutter.py:12: SyntaxWarning: invalid escape sequence '\w' /usr/lib/python3.12/dist-packages/libtbx/file_clutter.py:14: SyntaxWarning: invalid escape sequence '\w' /usr/lib/python3.12/dist-packages/libtbx/file_clutter.py:16: SyntaxWarning: invalid escape sequence '\w' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_python_code_parsing.py to tst_python_code_parsing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/try_hello_world_c.py to try_hello_world_c.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/pyplot.py to pyplot.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/prime_factors_of.py to prime_factors_of.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/epydoc_run.py to epydoc_run.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_build_path.py to show_build_path.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/install.py to install.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/check_libcpp.py to check_libcpp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/start_binary_bundle.py to start_binary_bundle.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/help.py to help.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/dtrace.py to dtrace.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_bin_path.py to show_bin_path.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_install_script_bat.py to create_install_script_bat.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/clean_clutter.py to clean_clutter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/chunk.py to chunk.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/start_process.py to start_process.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_dist_paths.py to show_dist_paths.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_tests.py to show_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/list_modules.py to list_modules.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_files.py to find_files.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/assert_not_show_diff.py to assert_not_show_diff.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/sge_qstat_counts.py to sge_qstat_counts.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_env.py to show_env.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/sge_available_slots.py to sge_available_slots.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/install_conda.py to install_conda.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/path_utility.py to path_utility.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/py_compile_all.py to py_compile_all.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_in_repositories.py to find_in_repositories.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_build_options.py to show_build_options.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/phil.py to phil.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/make_sphinx_html.py to make_sphinx_html.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_host_and_user.py to show_host_and_user.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/seconds_since_the_epoch.py to seconds_since_the_epoch.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/scons.py to scons.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/printenv.py to printenv.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/raise_exception_for_testing.py to raise_exception_for_testing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/git_avoid_merges.py to git_avoid_merges.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_number_of_processors.py to show_number_of_processors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_module_dependencies.py to show_module_dependencies.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/import_all_ext.py to import_all_ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_installer.py to create_installer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_mac_app.py to create_mac_app.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_pythonpath.py to show_pythonpath.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_include_paths.py to show_include_paths.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/analyse_code_comments.py to analyse_code_comments.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/add_from_future_import_division.py to add_from_future_import_division.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/list_source_files_sorted_by_size.py to list_source_files_sorted_by_size.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_lib_path.py to show_lib_path.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/env_run.py to env_run.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/nequal.py to nequal.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_unused_imports_crude.py to find_unused_imports_crude.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_reserved_names.py to find_reserved_names.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/list_files.py to list_files.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_commands.py to show_commands.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/line_count.py to line_count.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_numpy_version.py to show_numpy_version.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_untested.py to find_untested.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_full_command_path.py to show_full_command_path.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_unzipsfx.py to create_unzipsfx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/remote_processing.py to remote_processing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_numeric_version.py to show_numeric_version.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/run_pickled_function.py to run_pickled_function.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_variable_names.py to show_variable_names.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_all_on_path.py to show_all_on_path.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_selfx.py to create_selfx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/clear_paths.py to clear_paths.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/assert_line_count.py to assert_line_count.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/make_dist.py to make_dist.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/sphinx_build.py to sphinx_build.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/import_all_python.py to import_all_python.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/run_tests_parallel.py to run_tests_parallel.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/ipython_shell_start.py to ipython_shell_start.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_environ_usage.py to show_environ_usage.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/assert_stdin.py to assert_stdin.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/extract_code_from_txt.py to extract_code_from_txt.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_old_style_classes.py to find_old_style_classes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/easy_qsub.py to easy_qsub.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_but_no_repr.py to show_but_no_repr.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_python_sys_executable.py to show_python_sys_executable.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_windows_exe.py to create_windows_exe.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/wait_for_file.py to wait_for_file.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/parallel_simple.py to parallel_simple.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_unused_imports.py to find_unused_imports.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_under_build.py to find_under_build.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/bootstrap.py to bootstrap.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_cctbx_bundle_for_installer.py to create_cctbx_bundle_for_installer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/assert_stdin_contains_strings.py to assert_stdin_contains_strings.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/remove_tree.py to remove_tree.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/bundle_as_exe.py to bundle_as_exe.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_repository_paths.py to show_repository_paths.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_clutter.py to find_clutter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_date_and_time.py to show_date_and_time.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/any2unix.py to any2unix.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/assert_stdin_ends_with.py to assert_stdin_ends_with.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_python_dependencies.py to show_python_dependencies.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/console_utils.py to console_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/python_code_parsing.py to python_code_parsing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_easy_mp.py to tst_easy_mp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/smart_open.py to smart_open.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/binary_search.py to binary_search.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/runtime_utils.py to runtime_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_fully_buffered_timeout.py to tst_fully_buffered_timeout.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/cluster.py to cluster.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_version.py to tst_version.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/containers.py to containers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_containers.py to tst_containers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_easy_mp_state.py to tst_easy_mp_state.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_object_oriented_patterns.py to tst_object_oriented_patterns.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/cpp_function_name.py to cpp_function_name.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_easy_pickle.py to tst_easy_pickle.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/fastentrypoints.py to fastentrypoints.cpython-312.pyc /usr/lib/python3.12/dist-packages/libtbx/fastentrypoints.py:43: SyntaxWarning: invalid escape sequence '\.' /usr/lib/python3.12/dist-packages/libtbx/fastentrypoints.py:92: SyntaxWarning: invalid escape sequence '\.' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/easy_run.py to easy_run.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/introspection.py to introspection.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/progress.py to progress.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_mac_pkg.py to create_mac_pkg.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/setup_installer.py to setup_installer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/rpath.py to rpath.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/install_distribution.py to install_distribution.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_windows_installer.py to create_windows_installer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/install_conda.py to install_conda.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_installer.py to create_installer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_mac_app.py to create_mac_app.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/package_defs.py to package_defs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/install_base_packages.py to install_base_packages.cpython-312.pyc /usr/lib/python3.12/dist-packages/libtbx/auto_build/install_base_packages.py:840: SyntaxWarning: invalid escape sequence '\$' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/write_gui_dispatcher_include.py to write_gui_dispatcher_include.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_windows_exe.py to create_windows_exe.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/installer_utils.py to installer_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/regenerate_module_files.py to regenerate_module_files.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/bootstrap.py to bootstrap.cpython-312.pyc /usr/lib/python3.12/dist-packages/libtbx/auto_build/bootstrap.py:455: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/libtbx/auto_build/bootstrap.py:457: SyntaxWarning: invalid escape sequence '\s' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_cctbx_bundle_for_installer.py to create_cctbx_bundle_for_installer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/plus_installer.py to plus_installer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/make_bundle.py to make_bundle.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_runtime_utils.py to tst_runtime_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/thread_utils.py to thread_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math/special_functions/tst_spherical_bessel_jn.py to tst_spherical_bessel_jn.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math/special_functions/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/cufft/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/cufft/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/scattering/tst_direct_summation.py to tst_direct_summation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/scattering/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/omptbx/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/omptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/phil.py to phil.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/viewers/chimerax.py to chimerax.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/viewers/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity/mod_lbfgs.py to mod_lbfgs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity/mod_kmeans.py to mod_kmeans.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity/mod_indexing_ambiguity.py to mod_indexing_ambiguity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_misc.py to mod_misc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_pdb.py to mod_pdb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_threads.py to mod_threads.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_results.py to mod_results.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_gui_dialogs.py to mod_gui_dialogs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_lbfgs.py to mod_lbfgs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_gui_frames.py to mod_gui_frames.cpython-312.pyc /usr/lib/python3.12/dist-packages/prime/postrefine/mod_gui_frames.py:750: SyntaxWarning: invalid escape sequence '\A' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_merge_data.py to mod_merge_data.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_util.py to mod_util.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_mx.py to mod_mx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_input.py to mod_input.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_leastsqr.py to mod_leastsqr.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_run.py to mod_run.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_lbfgs_partiality.py to mod_lbfgs_partiality.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_perf.py to mod_perf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_partiality.py to mod_partiality.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_outlier.py to mod_outlier.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_plotter.py to mod_plotter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/postrefine.py to postrefine.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/plot_energy_spectrum.py to plot_energy_spectrum.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/spot_param_visualizer.py to spot_param_visualizer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/viewstats.py to viewstats.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/mpi_scale.py to mpi_scale.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/change_basis.py to change_basis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/run.py to run.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/r_mtz_mtz.py to r_mtz_mtz.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/plotstats.py to plotstats.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/prime_gui.py to prime_gui.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/solve_indexing_ambiguity.py to solve_indexing_ambiguity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/mpi_run.py to mpi_run.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/ray_trace.py to ray_trace.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/comparestats.py to comparestats.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/view_fineslices.py to view_fineslices.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/frame_extractor_by_scan.py to frame_extractor_by_scan.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/change_path_indexing_ambiguity.py to change_path_indexing_ambiguity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/print_integration_pickle.py to print_integration_pickle.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/cluster_isoform.py to cluster_isoform.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/explore_twin_operators.py to explore_twin_operators.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/compare_solution_pickles.py to compare_solution_pickles.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/iotacc.py to iotacc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/postrefine.py to postrefine.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/isoform_cluster/mod_isoform_cluster.py to mod_isoform_cluster.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/isoform_cluster/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/nexus/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/flumpy.py to flumpy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking/SmarGonShadowMask.py to SmarGonShadowMask.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/imageset.py to imageset.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFRayonixESRF.py to FormatTIFFRayonixESRF.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNexusJungfrauExt.py to FormatNexusJungfrauExt.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5Sacla.py to FormatHDF5Sacla.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTC.py to FormatXTC.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSER.py to FormatSER.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusSOLEILPX16MSN106.py to FormatCBFMiniPilatusSOLEILPX16MSN106.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI41.py to TemplatePYCXI41.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatMultiImage.py to FormatMultiImage.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerPhotonFactory.py to FormatCBFMiniEigerPhotonFactory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCmlfsom.py to FormatSMVADSCmlfsom.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS6MSN126.py to FormatCBFFullPilatusDLS6MSN126.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerDLS16MSN160.py to FormatCBFMiniEigerDLS16MSN160.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniADSCHF4M.py to FormatCBFMiniADSCHF4M.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNexus.py to FormatNexus.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFCspad.py to FormatCBFCspad.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTCEpix.py to FormatXTCEpix.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN09040159.py to FormatSMVRigakuSaturnSN09040159.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigaku.py to FormatSMVRigaku.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py to FormatCBFMiniPilatusSPring8_6MSN125.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN11480296.py to FormatSMVRigakuSaturnSN11480296.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI7d.py to TemplatePYCXI7d.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN07400090.py to FormatSMVRigakuSaturnSN07400090.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFBruker.py to FormatTIFFBruker.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMultiTileHierarchy.py to FormatCBFMultiTileHierarchy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5SaclaRayonix.py to FormatHDF5SaclaRayonix.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatBrukerPhoton.py to FormatBrukerPhoton.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxDLS16M.py to FormatNXmxDLS16M.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxEigerFilewriter.py to FormatNXmxEigerFilewriter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxDLSI19_2.py to FormatNXmxDLSI19_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI31.py to TemplatePYCXI31.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDESY6MSN115.py to FormatCBFMiniPilatusDESY6MSN115.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusCHESS_6MSN127.py to FormatCBFMiniPilatusCHESS_6MSN127.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFF.py to FormatTIFF.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNexusJungfrauHack.py to FormatNexusJungfrauHack.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN915.py to FormatSMVADSCSN915.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatRAXISIVSpring8.py to FormatRAXISIVSpring8.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatROD.py to FormatROD.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatPYunspecified.py to FormatPYunspecified.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVHamamatsuSPring8BL32XU.py to FormatSMVHamamatsuSPring8BL32XU.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114.py to FormatCBFMiniPilatusDLS6MSN114.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVNOIR.py to FormatSMVNOIR.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatRAXIS.py to FormatRAXIS.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN.py to FormatSMVADSCSN.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXDS.py to FormatXDS.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCDBG.py to FormatSMVADSCDBG.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuA200SPring8BL26B1.py to FormatSMVRigakuA200SPring8BL26B1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatStill.py to FormatStill.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTCMultipleDetectors.py to FormatXTCMultipleDetectors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFRayonix.py to FormatTIFFRayonix.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusHelpers.py to FormatCBFMiniPilatusHelpers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN928.py to FormatSMVADSCSN928.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuA200.py to FormatSMVRigakuA200.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTCCspad.py to FormatXTCCspad.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCNoDateStamp.py to FormatSMVADSCNoDateStamp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVHamamatsu.py to FormatSMVHamamatsu.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatBrukerFixedChi.py to FormatBrukerFixedChi.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxEigerFilewriterESRFID232.py to FormatNXmxEigerFilewriterESRFID232.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS300KSN104.py to FormatCBFFullPilatusDLS300KSN104.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMini.py to FormatCBFMini.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN445.py to FormatSMVADSCSN445.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFRayonixXPP.py to FormatTIFFRayonixXPP.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/Format.py to Format.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxDLS.py to FormatNXmxDLS.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerMaxIVBio.py to FormatCBFMiniEigerMaxIVBio.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxDLS16MI03.py to FormatNXmxDLS16MI03.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEiger.py to FormatCBFMiniEiger.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI71.py to TemplatePYCXI71.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatMRC.py to FormatMRC.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFull.py to FormatCBFFull.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py to FormatCBFMiniPilatusDLS6MSN100.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVJHSim.py to FormatSMVJHSim.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatEDFALS733.py to FormatEDFALS733.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI51.py to TemplatePYCXI51.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSNAPSID19.py to FormatSMVADSCSNAPSID19.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatGatanDM4.py to FormatGatanDM4.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuPilatus.py to FormatSMVRigakuPilatus.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5Lambda.py to FormatHDF5Lambda.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVTimePix_SU.py to FormatSMVTimePix_SU.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS12M.py to FormatCBFMiniPilatusDLS12M.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatPYunspecifiedStill.py to FormatPYunspecifiedStill.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSC.py to FormatSMVADSC.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatus3APS19ID6MSN132.py to FormatCBFMiniPilatus3APS19ID6MSN132.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatPilatusHelpers.py to FormatPilatusHelpers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatDIP2030b.py to FormatDIP2030b.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatBruker.py to FormatBruker.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerPetraP14.py to FormatCBFMiniEigerPetraP14.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5EigerNearlyNexus.py to FormatHDF5EigerNearlyNexus.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatPYmultitile.py to FormatPYmultitile.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMV.py to FormatSMV.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMultiTile.py to FormatCBFMultiTile.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatMarIP.py to FormatMarIP.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBF.py to FormatCBF.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFullPilatus.py to FormatCBFFullPilatus.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN457.py to FormatSMVADSCSN457.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatMultiImageLazy.py to FormatMultiImageLazy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatPY.py to FormatPY.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVCMOS1.py to FormatSMVCMOS1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN126.py to FormatCBFMiniPilatusDLS6MSN126.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI61.py to TemplatePYCXI61.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/nxmx_writer.py to nxmx_writer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN920.py to FormatSMVADSCSN920.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5.py to FormatHDF5.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5PAL.py to FormatHDF5PAL.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmx.py to FormatNXmx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuEiger.py to FormatSMVRigakuEiger.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxED.py to FormatNXmxED.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN926.py to FormatSMVADSCSN926.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN119.py to FormatCBFMiniPilatusDLS6MSN119.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTCRayonix.py to FormatXTCRayonix.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFHelpers.py to FormatTIFFHelpers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5EigerNearlyNexusSPring8.py to FormatHDF5EigerNearlyNexusSPring8.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNexusTimepix2M.py to FormatNexusTimepix2M.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/nexus.py to nexus.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuSaturnNoTS.py to FormatSMVRigakuSaturnNoTS.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuSaturn.py to FormatSMVRigakuSaturn.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusXXX.py to FormatCBFMiniPilatusXXX.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/Registry.py to Registry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5SaclaMPCCD.py to FormatHDF5SaclaMPCCD.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN905.py to FormatSMVADSCSN905.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTCJungfrau.py to FormatXTCJungfrau.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerChessID7B2.py to FormatCBFMiniEigerChessID7B2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI32.py to TemplatePYCXI32.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114DMM.py to FormatCBFMiniPilatusDLS6MSN114DMM.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN442.py to FormatSMVADSCSN442.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatRAXISII.py to FormatRAXISII.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/cbf_writer.py to cbf_writer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS6MSN100.py to FormatCBFFullPilatusDLS6MSN100.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatus.py to FormatCBFMiniPilatus.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFullByteOffset.py to FormatCBFFullByteOffset.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/image.py to image.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFRayonixSPring8.py to FormatTIFFRayonixSPring8.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util/dlsnxs2cbf.py to dlsnxs2cbf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util/rotate_and_average.py to rotate_and_average.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize/imageset.py to imageset.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize/filename.py to filename.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize/load.py to load.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize/xds.py to xds.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/version.py to version.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/example/to_xds.py to to_xds.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/example/resolution_corners.py to resolution_corners.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/compare.py to compare.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/detector.py to detector.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/detector_helpers.py to detector_helpers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/scan.py to scan.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/detector_helpers_types.py to detector_helpers_types.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/goniometer.py to goniometer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/crystal.py to crystal.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/scan_helpers.py to scan_helpers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/profile.py to profile.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/experiment_list.py to experiment_list.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/beam.py to beam.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/ext.py to ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/show_registry.py to show_registry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/install_format.py to install_format.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/debug_memory.py to debug_memory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/depends_on.py to depends_on.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/plot_detector_models.py to plot_detector_models.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/image_average.py to image_average.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/dlsnxs2cbf.py to dlsnxs2cbf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/detector_superpose.py to detector_superpose.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/saturation.py to saturation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/print_matching_images.py to print_matching_images.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/show_matching_formats.py to show_matching_formats.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/image2pickle.py to image2pickle.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/show_mask_info.py to show_mask_info.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/overload.py to overload.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/read_sequence.py to read_sequence.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/print_header.py to print_header.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/display_parallax_correction.py to display_parallax_correction.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/radial_average.py to radial_average.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/datablock.py to datablock.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/sequence_filenames.py to sequence_filenames.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/filecache.py to filecache.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/filecache_controller.py to filecache_controller.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs/PILATUS_300K_S_N_3_0104_Diamond.py to PILATUS_300K_S_N_3_0104_Diamond.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs/PILATUS_2M_S_N_24_0107_Diamond.py to PILATUS_2M_S_N_24_0107_Diamond.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/generate_fonts_ucs_cpp.py to generate_fonts_ucs_cpp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/gl_managed.py to gl_managed.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_viewer.py to wx_viewer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/generate_functions_bpl.py to generate_functions_bpl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/generate_defines_bpl.py to generate_defines_bpl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/fonts.py to fonts.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_ellipsoids_test.py to wx_ellipsoids_test.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_viewer_leapmotion.py to wx_viewer_leapmotion.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/quadrics.py to quadrics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/viewer_utils.py to viewer_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/util.py to util.cpython-312.pyc /usr/lib/python3.12/dist-packages/gltbx/util.py:61: SyntaxWarning: invalid escape sequence '\d' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/extract_opengl_specs.py to extract_opengl_specs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/gl.py to gl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/tst_viewer_utils.py to tst_viewer_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/tst_ellipsoids.py to tst_ellipsoids.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/images.py to images.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_motion_on_tab.py to wx_motion_on_tab.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/command_line/try_imports.py to try_imports.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_cube.py to wx_cube.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/glu.py to glu.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_scene.py to wx_scene.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/tst_fonts.py to tst_fonts.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_viewers_images.py to wx_viewers_images.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_viewer_example.py to wx_viewer_example.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/hydrogens_button.py to hydrogens_button.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/simple_zoom_list.py to simple_zoom_list.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/watch_file.py to watch_file.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/interactive_edit.py to interactive_edit.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/ligand_checklist.py to ligand_checklist.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/validation_lists.py to validation_lists.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/view_refinement.py to view_refinement.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/xmlrpc_server.py to xmlrpc_server.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/outlier_spots/fit_distribution.py to fit_distribution.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/outlier_spots/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/detectors/silicon.py to silicon.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/detectors/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx/tst_coordinate_frame_converter.py to tst_coordinate_frame_converter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx/coordinate_frame_converter.py to coordinate_frame_converter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx/coordinate_frame_helpers.py to coordinate_frame_helpers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/integration.py to integration.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/results_base.py to results_base.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/calibration.py to calibration.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/spotfinder_frame.py to spotfinder_frame.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/controls.py to controls.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/frame.py to frame.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/calibration_frame.py to calibration_frame.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/processing.py to processing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/drivers.py to drivers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/dataset.py to dataset.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/spotfinder_wrap.py to spotfinder_wrap.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/display.py to display.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/indexing.py to indexing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/pixels3d.py to pixels3d.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bandpass/simulated_annealing.py to simulated_annealing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bandpass/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/spot_shape.py to spot_shape.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/pixel_spread.py to pixel_spread.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/index.py to index.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/stats_index.py to stats_index.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/oscillation_shots.py to oscillation_shots.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/speckfinder.py to speckfinder.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dials_core/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dials_core/integration_core.py to integration_core.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/uc_frame.py to uc_frame.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/ring_frame.py to ring_frame.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/pyslip.py to pyslip.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/frame.py to frame.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/slip_viewer_image_factory.py to slip_viewer_image_factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/tile_generation.py to tile_generation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/calibration_frame.py to calibration_frame.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/slip_display.py to slip_display.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/example_frame_plugin_hidden.py to example_frame_plugin_hidden.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/score_frame.py to score_frame.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/slip_helpers.py to slip_helpers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/dual_resolution_helpers.py to dual_resolution_helpers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/simple_integration.py to simple_integration.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/deltapsi_refinement_preceding_integration.py to deltapsi_refinement_preceding_integration.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/dials_refinement_preceding_integration.py to dials_refinement_preceding_integration.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/util.py to util.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/stills_integration.py to stills_integration.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/spot_markup.py to spot_markup.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/ersatz_misset.py to ersatz_misset.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/uc1_2_positions_idx.py to uc1_2_positions_idx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/uc1_2a.py to uc1_2a.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/compare_mosflm_xds.py to compare_mosflm_xds.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/uc1_2.py to uc1_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/uc1_2_validate.py to uc1_2_validate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model/detector.py to detector.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model/tst_detector_model.py to tst_detector_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model/instrument_specifics.py to instrument_specifics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/uc1_2_positions.py to uc1_2_positions.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing/tst_auto_monoscan.py to tst_auto_monoscan.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing/tst_dataset1.py to tst_dataset1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing/do_index.py to do_index.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/run_spotfinder.py to run_spotfinder.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/wx_display.py to wx_display.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/solver.py to solver.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/integrate_crude.py to integrate_crude.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/refine_uc_cr.py to refine_uc_cr.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/create.py to create.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/run_labelit_index.py to run_labelit_index.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/explore_completeness.py to explore_completeness.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support/change_basis.py to change_basis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support/tst_sublattice.py to tst_sublattice.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil/phil_preferences.py to phil_preferences.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil/preferences.py to preferences.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil/scope.py to scope.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/force_cell.py to force_cell.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/nearest_neighbor.py to nearest_neighbor.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/outlier_detection.py to outlier_detection.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/outlier_procedure.py to outlier_procedure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/test_dps.py to test_dps.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/sampling.py to sampling.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/tools.py to tools.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/lattice.py to lattice.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/basis_choice.py to basis_choice.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/array_family/flex.py to flex.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/cell_assessment.py to cell_assessment.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/zuoreduction.py to zuoreduction.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/constrainment.py to constrainment.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/sampling.py to sampling.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/lepage.py to lepage.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/basis_choice.py to basis_choice.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/tst_iotbx_converter.py to tst_iotbx_converter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/simage.explore_completeness.py to simage.explore_completeness.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/index.py to index.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/simage.solver.py to simage.solver.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/viewer.py to viewer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/example_viewer.py to example_viewer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/slip_viewer.py to slip_viewer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/simage.create.py to simage.create.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/simage.wx_display.py to simage.wx_display.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/tst_ewald_sphere.py to tst_ewald_sphere.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg/tst_utils_clustering.py to tst_utils_clustering.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg/tst_bragg_minimal.py to tst_bragg_minimal.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/tst_predict.py to tst_predict.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/tst_partial_derivatives.py to tst_partial_derivatives.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation/constants.py to constants.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation/sim_utils.py to sim_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation/sim_pdf.py to sim_pdf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation/tst_xfel1_simple.py to tst_xfel1_simple.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/subgroup.py to subgroup.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints/g_gradients.py to g_gradients.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints/parameter_reduction.py to parameter_reduction.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/sgtbx_adaptor.py to sgtbx_adaptor.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation/max_like.py to max_like.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation/util.py to util.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/jungfrau.py to jungfrau.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/rayonix.py to rayonix.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/xtc.py to xtc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology/metrology.py to metrology.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology/generic_detector.py to generic_detector.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology/cspad_detector.py to cspad_detector.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/cspad.py to cspad.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util/time.py to time.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util/construct_frame.py to construct_frame.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util/energy_scan_notch_finder.py to energy_scan_notch_finder.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/__init__.py to __init__.cpython-312.pyc running install_egg_info running egg_info creating cctbx.egg-info writing cctbx.egg-info/PKG-INFO writing dependency_links to cctbx.egg-info/dependency_links.txt writing requirements to cctbx.egg-info/requires.txt writing top-level names to cctbx.egg-info/top_level.txt writing manifest file 'cctbx.egg-info/SOURCES.txt' reading manifest file 'cctbx.egg-info/SOURCES.txt' adding license file 'LICENSE.txt' writing manifest file 'cctbx.egg-info/SOURCES.txt' Copying cctbx.egg-info to /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx-2023.12.egg-info Skipping SOURCES.txt running install_scripts # install the dxtbx python modules dh_auto_install --sourcedirectory=dxtbx install -m0755 -d /<>/cctbx-2023.12\+ds2\+\~3.17.0\+ds1/debian/tmp pybuild --install -i python{version} -p 3.12 --dir dxtbx --dest-dir /<>/cctbx-2023.12\+ds2\+\~3.17.0\+ds1/debian/tmp I: pybuild base:305: /usr/bin/python3 setup.py install --root '/<>/debian/tmp' Found 20 dxtbx dispatchers Found 134 Format classes running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running install_lib copying /<>/.pybuild/cpython3_3.12/build/smtbx/structure_factors/direct/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/structure_factors/direct copying /<>/.pybuild/cpython3_3.12/build/smtbx/structure_factors/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/structure_factors copying /<>/.pybuild/cpython3_3.12/build/smtbx/stl/map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/stl copying /<>/.pybuild/cpython3_3.12/build/smtbx/stl/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/stl copying /<>/.pybuild/cpython3_3.12/build/smtbx/conftest.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx copying /<>/.pybuild/cpython3_3.12/build/smtbx/ab_initio/tests/tst_ab_initio_ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests copying /<>/.pybuild/cpython3_3.12/build/smtbx/ab_initio/tests/tst_charge_flipping.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests copying /<>/.pybuild/cpython3_3.12/build/smtbx/ab_initio/tests/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests copying /<>/.pybuild/cpython3_3.12/build/smtbx/ab_initio/charge_flipping.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio copying /<>/.pybuild/cpython3_3.12/build/smtbx/ab_initio/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio copying /<>/.pybuild/cpython3_3.12/build/smtbx/run_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx copying /<>/.pybuild/cpython3_3.12/build/smtbx/regression/tst_commandline_refine.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression copying /<>/.pybuild/cpython3_3.12/build/smtbx/regression/tst_commandline_anomrefine.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression copying /<>/.pybuild/cpython3_3.12/build/smtbx/regression/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression copying /<>/.pybuild/cpython3_3.12/build/smtbx/regression/test_data/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression/test_data copying /<>/.pybuild/cpython3_3.12/build/smtbx/absolute_structure/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/absolute_structure copying /<>/.pybuild/cpython3_3.12/build/smtbx/development.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx copying /<>/.pybuild/cpython3_3.12/build/smtbx/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx copying /<>/.pybuild/cpython3_3.12/build/smtbx/source_generators/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/source_generators copying /<>/.pybuild/cpython3_3.12/build/smtbx/source_generators/flex_fwd_h.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/source_generators copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/least_squares.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/geometrical/all.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/geometrical/hydrogens.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/geometrical/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/rigid.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/all.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/tst_reparametrisation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/test_same_group.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/tst_lbfgs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/test_rigid.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/test_occupancies.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/tst_constrained_structure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/test_disorder.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/test_direction.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/site.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/adp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/fpfdp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/occupancy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/weighting_schemes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/restraints/origin_fixing_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/restraints/adp_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/restraints/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints copying /<>/.pybuild/cpython3_3.12/build/smtbx/refinement/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/smtbx/array_family/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/array_family copying /<>/.pybuild/cpython3_3.12/build/smtbx/masks/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/masks copying /<>/.pybuild/cpython3_3.12/build/smtbx/command_line/refine.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/smtbx/command_line/absolute_structure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/smtbx/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/smtbx/command_line/masks.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/smtbx/command_line/benchmark_refinement.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/smtbx/command_line/anom_refine.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/smtbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx copying /<>/.pybuild/cpython3_3.12/build/smtbx/libtbx_refresh.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx_mosaic_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/rstbx_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_crystal_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_stl_set_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/smtbx_stl_map_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_suffixtree_shared_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/iotbx_scalepack_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/rstbx_symmetry_constraints_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_geometry_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/rstbx_array_family_flex_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/rstbx_bandpass_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/preset_buttons.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/webbrowser_messenger_py3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/HKLviewer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/cmdlineframes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/jsview_3d.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/default_user_preset_buttons.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/helpers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/xtriage_runner.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/xtricorder_runner.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/webbrowser_messenger_py2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/qt.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/hklview_frame.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/qt_chromium_check.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/display2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/hklviewer_gui.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/chimeraX_wheel_src/tool.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/chimeraX_wheel_src copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklviewer/chimeraX_wheel_src/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/chimeraX_wheel_src copying /<>/.pybuild/cpython3_3.12/build/crys3d/regression/tst_websocket.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /<>/.pybuild/cpython3_3.12/build/crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /<>/.pybuild/cpython3_3.12/build/crys3d/regression/tests_HKLviewer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /<>/.pybuild/cpython3_3.12/build/crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /<>/.pybuild/cpython3_3.12/build/crys3d/regression/tst_hklinfo.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /<>/.pybuild/cpython3_3.12/build/crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /<>/.pybuild/cpython3_3.12/build/crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /<>/.pybuild/cpython3_3.12/build/crys3d/regression/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /<>/.pybuild/cpython3_3.12/build/crys3d/programs/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/programs copying /<>/.pybuild/cpython3_3.12/build/crys3d/programs/HKLinfo.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/programs copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklview/view_3d.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklview/view_2d.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklview/comparison.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklview/frames.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview copying /<>/.pybuild/cpython3_3.12/build/crys3d/hklview/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview copying /<>/.pybuild/cpython3_3.12/build/crys3d/command_line/hklview.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /<>/.pybuild/cpython3_3.12/build/crys3d/command_line/HKLviewer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /<>/.pybuild/cpython3_3.12/build/crys3d/command_line/model_viewer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /<>/.pybuild/cpython3_3.12/build/crys3d/command_line/visualize_r_factors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /<>/.pybuild/cpython3_3.12/build/crys3d/command_line/make_install_HKLviewer_ChimeraX.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /<>/.pybuild/cpython3_3.12/build/crys3d/command_line/multiplicity_viewer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /<>/.pybuild/cpython3_3.12/build/crys3d/command_line/qttbx.view_structure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /<>/.pybuild/cpython3_3.12/build/crys3d/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /<>/.pybuild/cpython3_3.12/build/crys3d/command_line/compare_datasets.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /<>/.pybuild/cpython3_3.12/build/crys3d/command_line/HKLinfo.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /<>/.pybuild/cpython3_3.12/build/crys3d/qttbx/xray_structure_viewer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx copying /<>/.pybuild/cpython3_3.12/build/crys3d/qttbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx copying /<>/.pybuild/cpython3_3.12/build/crys3d/qttbx/map_viewer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx copying /<>/.pybuild/cpython3_3.12/build/cctbx_xray_observations_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/spotfinder_array_family_flex_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_probe_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_ramachandran_restraints_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_eltbx_neutron_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/run_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_18_doc_programming_tips_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_py_from_html.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_10_doc_programming_tips_1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_19_doc_programming_tips_3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_13_script_ideal_ss.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_14_script_lbfgs_no_curvature.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_2_doc_hlo_intro.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_12_script_compare_ss.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_16_script_lbfgs_with_curvature.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_4_doc_hlo_data_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_1_template.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_5_doc_hlo_map_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_3_doc_hlo_model_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_8_doc_maps_intro.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_11_script_1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/exercise.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_17_script_rfactors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_15_doc_models_hierarchy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_7_doc_low_flex_advanced.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_9_doc_maps_boxing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/command_line/extract_script_from_html_cctbx_doc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website copying /<>/.pybuild/cpython3_3.12/build/cctbx_website/libtbx_refresh.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website copying /<>/.pybuild/cpython3_3.12/build/dxtbx_format_image_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_translation_search_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cbflib_adaptbx/copy_files.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx copying /<>/.pybuild/cpython3_3.12/build/cbflib_adaptbx/run_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx copying /<>/.pybuild/cpython3_3.12/build/cbflib_adaptbx/command_line/dump.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cbflib_adaptbx/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cbflib_adaptbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx copying /<>/.pybuild/cpython3_3.12/build/cbflib_adaptbx/exercise_compression.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx copying /<>/.pybuild/cpython3_3.12/build/fast_linalg/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fast_linalg copying /<>/.pybuild/cpython3_3.12/build/mmtbx_validation_ramachandran_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_wigner_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_geometry_indexing_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/std_pair_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_sparse_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_math_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_masks_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/small_cell.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell copying /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/powder_util.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell copying /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/small_cell_index.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/xfel_small_cell_process.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/cake_plot.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/cake_plot_prep.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/candidate_cells.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/small_cell_process.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/powder_from_spots.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/solve_orientation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell copying /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell copying /<>/.pybuild/cpython3_3.12/build/xfel/small_cell/write_orientation_arrows.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell copying /<>/.pybuild/cpython3_3.12/build/xfel/mono_simulation/mono_treatment.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation copying /<>/.pybuild/cpython3_3.12/build/xfel/mono_simulation/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation copying /<>/.pybuild/cpython3_3.12/build/xfel/mono_simulation/max_like_pos_neg.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation copying /<>/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_calib.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/pnccd_tbx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/fxs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/pnccd_hit.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_index.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_mask.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_c2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_bg.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_launch.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/amo/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/phil_patch.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/components/run_stats_plotter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/components/xfel_gui_plotter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/components/spotfinder_plotter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/components/submission_tracker.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/components/spotfinder_scraper.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/components/xfel_gui_controls.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/components/timeit.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/components/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/components/xfel_gui_init.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/components/xfel_gui_dialogs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/components/tooltips.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_run_stats_in_gui.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line/ui_server.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_reflection_stats.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_run_stats.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_run_stats_from_experiments.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_isoform_cloud.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line/print_run_stats.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_uc_cloud.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_uc_cloud_from_experiments.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line/xfel_gui_launch.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line/get_hit_timestamps.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_spotfinder_stats_in_gui.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/experiment.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/trial.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/tag.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/frame_logging.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/run.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/job.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/merging_log_scraper.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/task.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/dxtbx_db.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/dataset.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/rungroup.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/cfgs/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/cfgs copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/cfgs/shifter_templates.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/cfgs copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/stats.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /<>/.pybuild/cpython3_3.12/build/xfel/ui/db/xfel_db.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /<>/.pybuild/cpython3_3.12/build/xfel/cftbx/detector/metrology2phil.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector copying /<>/.pybuild/cpython3_3.12/build/xfel/cftbx/detector/cspad_cbf_tbx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector copying /<>/.pybuild/cpython3_3.12/build/xfel/cftbx/detector/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector copying /<>/.pybuild/cpython3_3.12/build/xfel/cftbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/correction_vector_plot.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cxi_cc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/postrefinement_factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/integrate_image_api.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_hdf5.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_ledge.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_dump.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_daq_status.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/average_tbx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/common_mode.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_average.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/parse_calib.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/pixel_histograms.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_illumination_filter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/histogram_finalise.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_radial_average.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_view.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/display_calib.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_event_code.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/xes_histograms.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_event_info.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_filter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_xes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/xes_finalise.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_image_dict.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_hitfind.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_spectrum_filter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/hitfinder_tbx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/cspad_tbx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/xes_faster_histograms.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_dump_bitmap.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_param.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/rayonix_tbx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_mar.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_pulnix_dump.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/completeness_plot.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/clustering/test_cluster.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/clustering/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/clustering/Cluster.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/clustering/SingleFrame.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/trumpet_plot.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/spectra_filter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/display_powder_arcs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/util.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/gfx/status_plot.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/gfx/wx_detectors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/gfx/trials_plot.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/gfx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/display_spots.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/strong_zulu.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/postrefinement_legacy_rs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/command_line/einsle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/data_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/merging_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/average_spots.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/postrefinement_hybrid_rs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /<>/.pybuild/cpython3_3.12/build/xfel/cxi/postrefinement_updated_rs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /<>/.pybuild/cpython3_3.12/build/xfel/util/split_detector.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /<>/.pybuild/cpython3_3.12/build/xfel/util/image_pickle_locator.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /<>/.pybuild/cpython3_3.12/build/xfel/util/mp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /<>/.pybuild/cpython3_3.12/build/xfel/util/dials_pickle_reader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /<>/.pybuild/cpython3_3.12/build/xfel/util/weather.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /<>/.pybuild/cpython3_3.12/build/xfel/util/cctbx_xfel_installer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /<>/.pybuild/cpython3_3.12/build/xfel/util/drift.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /<>/.pybuild/cpython3_3.12/build/xfel/util/dials_file_matcher.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /<>/.pybuild/cpython3_3.12/build/xfel/util/show_spot_separation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /<>/.pybuild/cpython3_3.12/build/xfel/util/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /<>/.pybuild/cpython3_3.12/build/xfel/util/kapton_2019_correction_frame_frame_plugin.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /<>/.pybuild/cpython3_3.12/build/xfel/util/reflection_length.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /<>/.pybuild/cpython3_3.12/build/xfel/euxfel/agipd_cxigeom2nexus.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel copying /<>/.pybuild/cpython3_3.12/build/xfel/euxfel/agipd_from_defs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel copying /<>/.pybuild/cpython3_3.12/build/xfel/euxfel/write_composite_image.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel copying /<>/.pybuild/cpython3_3.12/build/xfel/euxfel/read_geom.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel copying /<>/.pybuild/cpython3_3.12/build/xfel/euxfel/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel copying /<>/.pybuild/cpython3_3.12/build/xfel/clustering/simulate_partial_data.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering copying /<>/.pybuild/cpython3_3.12/build/xfel/clustering/cluster_groups.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering copying /<>/.pybuild/cpython3_3.12/build/xfel/clustering/api.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering copying /<>/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/cluster_unit_cell.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/cluster_intensity_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/cluster_per_frame_wilson.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/cluster_42.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/cluster_visualise_orientations.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/clustering/cluster.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering copying /<>/.pybuild/cpython3_3.12/build/xfel/clustering/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering copying /<>/.pybuild/cpython3_3.12/build/xfel/clustering/singleframe.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering copying /<>/.pybuild/cpython3_3.12/build/xfel/graph_proc/components.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc copying /<>/.pybuild/cpython3_3.12/build/xfel/graph_proc/parameter_optimizer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc copying /<>/.pybuild/cpython3_3.12/build/xfel/graph_proc/multiproc_temp_parame_opt.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc copying /<>/.pybuild/cpython3_3.12/build/xfel/graph_proc/graph.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc copying /<>/.pybuild/cpython3_3.12/build/xfel/graph_proc/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc copying /<>/.pybuild/cpython3_3.12/build/xfel/pal/jf4m_geom2nexus.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/pal copying /<>/.pybuild/cpython3_3.12/build/xfel/pal/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/pal copying /<>/.pybuild/cpython3_3.12/build/xfel/vonHamos/fit_3_gaussian.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos copying /<>/.pybuild/cpython3_3.12/build/xfel/vonHamos/test_3_gaussian.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos copying /<>/.pybuild/cpython3_3.12/build/xfel/vonHamos/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos copying /<>/.pybuild/cpython3_3.12/build/xfel/lcls_api/exercise_api.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api copying /<>/.pybuild/cpython3_3.12/build/xfel/lcls_api/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api copying /<>/.pybuild/cpython3_3.12/build/xfel/lcls_api/psana_cctbx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/refine.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/absorption.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/integrate/factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/integrate/integrate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/integrate/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/input/file_lister.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/input/file_loader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/input/file_load_calculator.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/input/factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/input/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/output/factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/output copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/output/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/output copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/scale/experiment_scaler.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/scale/factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/scale/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/worker.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/tdata/cell_listing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/tdata/factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/tdata/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/reflection_table_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/filter/factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/filter/reflection_filter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/filter/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/filter/experiment_filter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/utils/memory_usage.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/utils/data_counter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/utils/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/model/factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/model/crystal_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/model/resolution_binner.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/model/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/validation/application.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/validation copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/validation/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/validation copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/group/group_reflections.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/group/factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/group/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/phil/phil.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/phil copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/phil/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/phil copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine/postrefinement_rs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine/factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine/postrefinement_rs2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/lunus/lunus.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/lunus/factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/lunus/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/merge/merger.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/merge/factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/merge/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/mpi_helper.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/error_modifier_sr.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/error_modifier_ha14.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/error_modifier_ev11.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/mpi_logger.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/compare_results.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/cosym_tranch_align.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/reindex_cosym.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/token_passing_left_right.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/reindex_to_abc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/cosym.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/df_cosym.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/reindex_to_reference.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/polarization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/aux_cosym.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/balance/factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/balance/load_balancer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/balance/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/intensity_resolution_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/intensity_histogram.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/experiment_resolution_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/beam_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/unit_cell_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/phil_validation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/database/merging_database.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/database/merging_database_flex.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/database/merging_database_fs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/database/merging_database_sqlite3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/database/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/general_fcalc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/model/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/model copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/postrefine/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/postrefine copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/error_modeler_base.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/sdfac_propagate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/errors_from_residuals.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/sdfac_refine.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/sdfac_refine_levmar.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/sdfac_refine_lbfgs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/reduced_chi_squared.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/sdfac_propagate_and_refine.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/statistics/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/statistics copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/predictions_to_edges.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/report/graphs/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/graphs copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/report/tables/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/tables copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/report/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/command_line/merge.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/command_line/mpi_integrate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/merging/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging copying /<>/.pybuild/cpython3_3.12/build/xfel/xpp/simulate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /<>/.pybuild/cpython3_3.12/build/xfel/xpp/progress_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /<>/.pybuild/cpython3_3.12/build/xfel/xpp/isoform.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /<>/.pybuild/cpython3_3.12/build/xfel/xpp/split_pickles.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /<>/.pybuild/cpython3_3.12/build/xfel/xpp/progress_support.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /<>/.pybuild/cpython3_3.12/build/xfel/xpp/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_detector_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_pbs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/convert_gain_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_index.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/view_pixel_histograms.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_pickle2cbf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/xpp_progress_detail.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_lsf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/fee_calibration.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/xpp_progress_bar.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/experiment_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/make_mask.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_merge.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/xtc_process.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/trumpet_plots.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/xfel_process.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/find_highres_shots.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/fee_view.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_slaccalib2cbfheader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/mpi_average.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cctbx_integration_pickle_viewer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/convert_gain_map_cbf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/metrology.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_cbfheader2slaccalib.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/xtc_dump.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/riso.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_parameters.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/filter_experiments_by_rmsd.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/quadrants.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/histogram_finalise.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/xpp_isoform.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/smooth_spectrum.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/print_pickle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/or_mask.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_display_metrology.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_stream_to_pickle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/stills_merge.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_psana.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_circular_gain_mask.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/frame_extractor.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/xes_histograms.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/weather.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/get_next_trial_id.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/xpp_simulate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/plot_to_subpixel.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/drift.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cbf_average.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/calc_gain_ratio.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/striping.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/launch_fxs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/FEE_average_plot.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/xes_finalise.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_cspad_pinwheel.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/experiment_residuals.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_xmerge.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/detector_residuals.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/show_spot_separation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/h5_average.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/overlay_spectra.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/runs_sentinel.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/experiment_json_to_cbf_def.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_generate_circular_gain_mask.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_detector_congruence.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_cbf_metrology.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/brehm_diederichs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_detector_format_versions.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/upload_mtz.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_xtc_process.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/trial_stats.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/monitor_trials.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/jungfrau_metrics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/subtract_background.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/frame_unpickler.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/beamcenter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/list_db_metadata.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_plotcv.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/monitor_detectors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_spots.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_mpi_submit.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_detector_congruence2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/make_mar_mask.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/jobs_sentinel.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_apply_metrology.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_detector_shifts.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_view.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_optical2cbfheader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_diff.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/make_dials_mask.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/recompute_mosaicity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/auto_submit.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/radial_average.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/quadrants_cbf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/postrefine.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_calibdir2cbfheader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_pyana.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /<>/.pybuild/cpython3_3.12/build/xfel/swissfel/sync_jf16m_geometry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel copying /<>/.pybuild/cpython3_3.12/build/xfel/swissfel/jf16m_cxigeom2nexus.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel copying /<>/.pybuild/cpython3_3.12/build/xfel/swissfel/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel copying /<>/.pybuild/cpython3_3.12/build/xfel/metrology/mark1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /<>/.pybuild/cpython3_3.12/build/xfel/metrology/mark0.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /<>/.pybuild/cpython3_3.12/build/xfel/metrology/flatfile.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /<>/.pybuild/cpython3_3.12/build/xfel/metrology/mark3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /<>/.pybuild/cpython3_3.12/build/xfel/metrology/quadrant.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /<>/.pybuild/cpython3_3.12/build/xfel/metrology/mark10.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /<>/.pybuild/cpython3_3.12/build/xfel/metrology/legacy_scale/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/legacy_scale copying /<>/.pybuild/cpython3_3.12/build/xfel/metrology/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /<>/.pybuild/cpython3_3.12/build/xfel/metrology/panel_fitting.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /<>/.pybuild/cpython3_3.12/build/dxtbx_format_nexus_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/fable/tst_cout.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /<>/.pybuild/cpython3_3.12/build/fable/tst_cout_compile.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /<>/.pybuild/cpython3_3.12/build/fable/run_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /<>/.pybuild/cpython3_3.12/build/fable/simple_compilation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /<>/.pybuild/cpython3_3.12/build/fable/tst_equivalence.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /<>/.pybuild/cpython3_3.12/build/fable/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /<>/.pybuild/cpython3_3.12/build/fable/tst_ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /<>/.pybuild/cpython3_3.12/build/fable/cout.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /<>/.pybuild/cpython3_3.12/build/fable/tokenization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /<>/.pybuild/cpython3_3.12/build/fable/command_line/show_calls.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /<>/.pybuild/cpython3_3.12/build/fable/command_line/insert_write_at_start_of_each_procedure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /<>/.pybuild/cpython3_3.12/build/fable/command_line/cout.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /<>/.pybuild/cpython3_3.12/build/fable/command_line/split.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /<>/.pybuild/cpython3_3.12/build/fable/command_line/read.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /<>/.pybuild/cpython3_3.12/build/fable/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /<>/.pybuild/cpython3_3.12/build/fable/command_line/fem_include_search_paths.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /<>/.pybuild/cpython3_3.12/build/fable/tst_read.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /<>/.pybuild/cpython3_3.12/build/fable/intrinsics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /<>/.pybuild/cpython3_3.12/build/fable/read.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /<>/.pybuild/cpython3_3.12/build/fable/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /<>/.pybuild/cpython3_3.12/build/fable/equivalence.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /<>/.pybuild/cpython3_3.12/build/mmtbx_dynamics_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx/regular_grid_on_unit_sphere.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/stl/map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /<>/.pybuild/cpython3_3.12/build/scitbx/stl/tst_set.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /<>/.pybuild/cpython3_3.12/build/scitbx/stl/tst_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /<>/.pybuild/cpython3_3.12/build/scitbx/stl/vector.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /<>/.pybuild/cpython3_3.12/build/scitbx/stl/tst_vector.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /<>/.pybuild/cpython3_3.12/build/scitbx/stl/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /<>/.pybuild/cpython3_3.12/build/scitbx/stl/set.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /<>/.pybuild/cpython3_3.12/build/scitbx/lstbx/tests/tst_normal_equations.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/lstbx/tests/test_problems.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/lstbx/tests/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/lstbx/normal_eqns_solving.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/lstbx/normal_eqns.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/lstbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/glmtbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/glmtbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/matrix/row_echelon.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/matrix copying /<>/.pybuild/cpython3_3.12/build/scitbx/matrix/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/matrix copying /<>/.pybuild/cpython3_3.12/build/scitbx/examples/lbfgs_recipe.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /<>/.pybuild/cpython3_3.12/build/scitbx/examples/rigid_body_refinement_core.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /<>/.pybuild/cpython3_3.12/build/scitbx/examples/chebyshev_lsq_example.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /<>/.pybuild/cpython3_3.12/build/scitbx/examples/integrating_a_weighted_sinc_function.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /<>/.pybuild/cpython3_3.12/build/scitbx/examples/functions.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /<>/.pybuild/cpython3_3.12/build/scitbx/examples/principal_axes_of_inertia.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /<>/.pybuild/cpython3_3.12/build/scitbx/examples/immoptibox_ports.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /<>/.pybuild/cpython3_3.12/build/scitbx/examples/minimizer_comparisons.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /<>/.pybuild/cpython3_3.12/build/scitbx/examples/bevington/silver.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/bevington copying /<>/.pybuild/cpython3_3.12/build/scitbx/examples/bevington/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/bevington copying /<>/.pybuild/cpython3_3.12/build/scitbx/examples/lbfgs_linear_least_squares_fit.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /<>/.pybuild/cpython3_3.12/build/scitbx/examples/flex_array_loops.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /<>/.pybuild/cpython3_3.12/build/scitbx/examples/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /<>/.pybuild/cpython3_3.12/build/scitbx/examples/flex_grid.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /<>/.pybuild/cpython3_3.12/build/scitbx/examples/bootstrap.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /<>/.pybuild/cpython3_3.12/build/scitbx/sparse/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/sparse copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_singular.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_joint_lib.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_free_motion_hard.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_molecules.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/free_motion_reference_impl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/wx_free_motion.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_featherstone.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/joint_lib.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/test_simulation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/wx_molecules.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_spherical_refinement.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/wx_joint_lib.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/featherstone.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/test_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_free_motion.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/wx_tardy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/tst_energy_plots.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/tardy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/tst_tardy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/joint_lib.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/body_lib.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/spatial_lib.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/featherstone.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/tst_basic.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/make_bundles.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body copying /<>/.pybuild/cpython3_3.12/build/scitbx/rigid_body/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body copying /<>/.pybuild/cpython3_3.12/build/scitbx/linalg/svd.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg copying /<>/.pybuild/cpython3_3.12/build/scitbx/linalg/ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg copying /<>/.pybuild/cpython3_3.12/build/scitbx/linalg/householder.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg copying /<>/.pybuild/cpython3_3.12/build/scitbx/linalg/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg copying /<>/.pybuild/cpython3_3.12/build/scitbx/linalg/eigensystem.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg copying /<>/.pybuild/cpython3_3.12/build/scitbx/run_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/fftpack.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/lbfgsb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/minimizers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/graph/test_cases_tardy_pdb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /<>/.pybuild/cpython3_3.12/build/scitbx/graph/tst_tardy_tree.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /<>/.pybuild/cpython3_3.12/build/scitbx/graph/tst_tardy_tree_find_paths.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /<>/.pybuild/cpython3_3.12/build/scitbx/graph/rigidity_matrix_symbolic.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /<>/.pybuild/cpython3_3.12/build/scitbx/graph/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /<>/.pybuild/cpython3_3.12/build/scitbx/graph/rigidity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /<>/.pybuild/cpython3_3.12/build/scitbx/graph/tardy_tree.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /<>/.pybuild/cpython3_3.12/build/scitbx/graph/tst_rigidity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /<>/.pybuild/cpython3_3.12/build/scitbx/graph/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /<>/.pybuild/cpython3_3.12/build/scitbx/graph/tst_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /<>/.pybuild/cpython3_3.12/build/scitbx/random/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/random copying /<>/.pybuild/cpython3_3.12/build/scitbx/differential_evolution.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/genetic_algorithm_with_mp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators copying /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/lbfgs_fem.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators copying /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_reductions.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_operator_traits_builtin.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/operator_functor_info.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_all.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_algebras.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_operator_functors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_apply.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_std_imports.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators copying /<>/.pybuild/cpython3_3.12/build/scitbx/source_generators/flex_fwd_h.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators copying /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin/refinebase.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin/optional.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin/min_logging.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin/compulsory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin/minimizer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin/bounds.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin/reparams.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin/realsymmetricpseudoinverse.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin/twisted_gaussian.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /<>/.pybuild/cpython3_3.12/build/scitbx/dtmin/auxiliary.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /<>/.pybuild/cpython3_3.12/build/scitbx/r3_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/cross_entropy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tst_2d_zernike.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tst_multivariate_moments.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/sphere_sphere_intersection.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tst_zernike_mom.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/zernike_align_fft.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/incremental_SO3_sampling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/besselk.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tst_undirected_graph.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/fliege_mayer_900_ylm.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tst_bessel_zeros.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/chebyshev_lsq_fit.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/clustering.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/lefebvre.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/so3_lie_algebra.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/minimum_covering_ellipsoid.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/des_3_100_13.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tst_so3_lie_algebra.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/periodogram.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_r3_rotation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_gaussian.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_curve_fitting.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_resample.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_weighted_correlation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_error_propagation_matrix_inverse.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_fit_peak.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_fit_quadratic_function.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_uniform_rotation_matrix.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_minimum_covering_ellipsoid.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_cubic_equation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_halton.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_math.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_euler_angles.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_periodogram.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_gaussian_fit_1d_analytical.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_tetrahedron.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_exp_functions.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_orthonormal_basis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_g_function.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_bessel.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_quadrature.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_angle_derivative.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_dmatrix.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_similarity_indices.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_superpose.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_clustering.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_line_search.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_gcd.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/spe.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/des_3_240_21.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/euler_angles.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/fliege_mayer_400.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/farey.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/distributions.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/curve_fitting.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/breakpoint.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/fliege_mayer_900.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/tst_zernike.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/multiple_superposition.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/sieve_of_eratosthenes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/superpose.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/undirected_graph.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/fit_quadratic_function.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/scale_curves.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/fit_peak.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/cubic_spline.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/gumbel.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/gaussian.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/gaussian_fit.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /<>/.pybuild/cpython3_3.12/build/scitbx/math/boost_python/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/boost_python copying /<>/.pybuild/cpython3_3.12/build/scitbx/graphics_utils/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graphics_utils copying /<>/.pybuild/cpython3_3.12/build/scitbx/graphics_utils/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graphics_utils copying /<>/.pybuild/cpython3_3.12/build/scitbx/suffixtree/single.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/suffixtree copying /<>/.pybuild/cpython3_3.12/build/scitbx/suffixtree/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/suffixtree copying /<>/.pybuild/cpython3_3.12/build/scitbx/array_family/shared.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family copying /<>/.pybuild/cpython3_3.12/build/scitbx/array_family/flex.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family copying /<>/.pybuild/cpython3_3.12/build/scitbx/array_family/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family copying /<>/.pybuild/cpython3_3.12/build/scitbx/lbfgs/tst_mpi_split_evaluator.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /<>/.pybuild/cpython3_3.12/build/scitbx/lbfgs/tst_lbfgs_fem.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /<>/.pybuild/cpython3_3.12/build/scitbx/lbfgs/tst_func_free_line_search.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /<>/.pybuild/cpython3_3.12/build/scitbx/lbfgs/tst_curvatures.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /<>/.pybuild/cpython3_3.12/build/scitbx/lbfgs/tst_ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /<>/.pybuild/cpython3_3.12/build/scitbx/lbfgs/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /<>/.pybuild/cpython3_3.12/build/scitbx/golden_section_search.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/direct_search_simulated_annealing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/simplex.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/wigner/tst_wigner3j.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/wigner copying /<>/.pybuild/cpython3_3.12/build/scitbx/wigner/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/wigner copying /<>/.pybuild/cpython3_3.12/build/scitbx/cubicle_neighbors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/iso_surface/tst_iso_surface.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/iso_surface copying /<>/.pybuild/cpython3_3.12/build/scitbx/iso_surface/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/iso_surface copying /<>/.pybuild/cpython3_3.12/build/scitbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/libtbx_refresh.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/minpack.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils/signal_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils/tst_random_transform.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils/robust_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils/command_line.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils/random_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils/tst_graph.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils/misc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils/dicts.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils/tst_robust.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils/graph_tools.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils/random_transform.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /<>/.pybuild/cpython3_3.12/build/scitbx/python_utils/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /<>/.pybuild/cpython3_3.12/build/scitbx/smoothing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /<>/.pybuild/cpython3_3.12/build/scitbx/boost_python/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/boost_python copying /<>/.pybuild/cpython3_3.12/build/scitbx/stdlib/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stdlib copying /<>/.pybuild/cpython3_3.12/build/cctbx_orientation_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/gltbx_viewer_utils_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_tls_decompose_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/gltbx_gl_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/omptbx_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/smtbx_refinement_restraints_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_merging_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/ccp4io_adaptbx_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_eltbx_wavelengths_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_adptbx_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_symmetry_search_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_utility_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_array_family_shared_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/spotfinder/math_support/sphere_formulae.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/math_support copying /<>/.pybuild/cpython3_3.12/build/spotfinder/math_support/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/math_support copying /<>/.pybuild/cpython3_3.12/build/spotfinder/run_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder copying /<>/.pybuild/cpython3_3.12/build/spotfinder/servers/adsc_client.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /<>/.pybuild/cpython3_3.12/build/spotfinder/servers/spotfinder_server_read_file.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /<>/.pybuild/cpython3_3.12/build/spotfinder/servers/mp_spotfinder_server_read_file.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /<>/.pybuild/cpython3_3.12/build/spotfinder/servers/pilatus_client.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /<>/.pybuild/cpython3_3.12/build/spotfinder/servers/specific_client_example.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /<>/.pybuild/cpython3_3.12/build/spotfinder/servers/multipart_encoder.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /<>/.pybuild/cpython3_3.12/build/spotfinder/servers/general_client_example.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /<>/.pybuild/cpython3_3.12/build/spotfinder/servers/spotfinder_server_client_push.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /<>/.pybuild/cpython3_3.12/build/spotfinder/servers/bcsb_client_example.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /<>/.pybuild/cpython3_3.12/build/spotfinder/servers/apache_bcsb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /<>/.pybuild/cpython3_3.12/build/spotfinder/servers/apache_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /<>/.pybuild/cpython3_3.12/build/spotfinder/servers/apache.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /<>/.pybuild/cpython3_3.12/build/spotfinder/servers/mp_spotfinder_server_is_alive.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /<>/.pybuild/cpython3_3.12/build/spotfinder/servers/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /<>/.pybuild/cpython3_3.12/build/spotfinder/servers/thin_client.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /<>/.pybuild/cpython3_3.12/build/spotfinder/servers/apache_dials.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /<>/.pybuild/cpython3_3.12/build/spotfinder/dxtbx_toolbox/practical_heuristics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/dxtbx_toolbox copying /<>/.pybuild/cpython3_3.12/build/spotfinder/dxtbx_toolbox/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/dxtbx_toolbox copying /<>/.pybuild/cpython3_3.12/build/spotfinder/core_toolbox/close_spots_detail.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/core_toolbox copying /<>/.pybuild/cpython3_3.12/build/spotfinder/core_toolbox/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/core_toolbox copying /<>/.pybuild/cpython3_3.12/build/spotfinder/array_family/flex.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/array_family copying /<>/.pybuild/cpython3_3.12/build/spotfinder/array_family/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/array_family copying /<>/.pybuild/cpython3_3.12/build/spotfinder/command_line/mp_spotfinder_server_read_file.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /<>/.pybuild/cpython3_3.12/build/spotfinder/command_line/sweep_strength.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /<>/.pybuild/cpython3_3.12/build/spotfinder/command_line/image_viewer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /<>/.pybuild/cpython3_3.12/build/spotfinder/command_line/signal_strength.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /<>/.pybuild/cpython3_3.12/build/spotfinder/command_line/find_active_area.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /<>/.pybuild/cpython3_3.12/build/spotfinder/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /<>/.pybuild/cpython3_3.12/build/spotfinder/command_line/thin_client.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /<>/.pybuild/cpython3_3.12/build/spotfinder/diffraction/geometry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction copying /<>/.pybuild/cpython3_3.12/build/spotfinder/diffraction/imagefiles.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction copying /<>/.pybuild/cpython3_3.12/build/spotfinder/diffraction/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction copying /<>/.pybuild/cpython3_3.12/build/spotfinder/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder copying /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel/correction_vector_plot.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel copying /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel/cxi_run3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel copying /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel/cxi_phil.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel copying /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel copying /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/wrappers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications copying /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/practical_heuristics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications copying /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/image_viewer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications copying /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx/ice2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx copying /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx/method2_resolution.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx copying /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx/ice_nztt.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx copying /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx/spotreporter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx copying /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx copying /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/stats_distl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications copying /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/signal_strength.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications copying /<>/.pybuild/cpython3_3.12/build/spotfinder/applications/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications copying /<>/.pybuild/cpython3_3.12/build/spotfinder/exception.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder copying /<>/.pybuild/cpython3_3.12/build/cctbx_eltbx_henke_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_random_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_connected_component_algorithm_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_array_family_flex_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/boost_python_hybrid_times_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/iotbx_pdb_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/iotbx_dtrek_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/ccp4io_adaptbx/copy_files.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx copying /<>/.pybuild/cpython3_3.12/build/ccp4io_adaptbx/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx copying /<>/.pybuild/cpython3_3.12/build/ccp4io_adaptbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx copying /<>/.pybuild/cpython3_3.12/build/determine_unit_cell_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_array_family_flex_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cma_es/run_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cma_es copying /<>/.pybuild/cpython3_3.12/build/cma_es/cma_es_interface.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cma_es copying /<>/.pybuild/cpython3_3.12/build/cma_es/tst_cma_es.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cma_es copying /<>/.pybuild/cpython3_3.12/build/cma_es/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cma_es copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx_python_streambuf_test_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_graphics_utils_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_graph_structure_comparison_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/smtbx_ab_initio_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/dxtbx_model_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_eltbx_tiny_pse_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_anharmonic_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_iso_surface_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx_boost_thread_test_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/annlib_adaptbx/run_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx copying /<>/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx/self_match.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx copying /<>/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx/sample.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx copying /<>/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx copying /<>/.pybuild/cpython3_3.12/build/annlib_adaptbx/source_generators/generate_all.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/source_generators copying /<>/.pybuild/cpython3_3.12/build/annlib_adaptbx/source_generators/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/source_generators copying /<>/.pybuild/cpython3_3.12/build/annlib_adaptbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx copying /<>/.pybuild/cpython3_3.12/build/gltbx_fonts_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_geometry_primitive_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_dssp_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/simtbx/gpu/tst_gpu_multisource_background.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu copying /<>/.pybuild/cpython3_3.12/build/simtbx/gpu/tst_shoeboxes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu copying /<>/.pybuild/cpython3_3.12/build/simtbx/gpu/tst_exafel_api.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu copying /<>/.pybuild/cpython3_3.12/build/simtbx/gpu/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu copying /<>/.pybuild/cpython3_3.12/build/simtbx/run_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx copying /<>/.pybuild/cpython3_3.12/build/simtbx/modeling/forward_models.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling copying /<>/.pybuild/cpython3_3.12/build/simtbx/modeling/predictions.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling copying /<>/.pybuild/cpython3_3.12/build/simtbx/modeling/FormatHDF5AttributeGeometry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling copying /<>/.pybuild/cpython3_3.12/build/simtbx/modeling/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_input.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_gui_dialogs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_mosaic.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_multisource_background.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_cbf_write.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_beam.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_gui_frames.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_minimal.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_multipanel.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_threads.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_anisotropic_mosaicity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_crystal.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_gui_init.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_gaussian_mosaicity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/anisotropic_mosaicity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_gaussian_mosaicity2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_pilatus.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_gauss_argchk.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_basic.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/sim_data.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx copying /<>/.pybuild/cpython3_3.12/build/simtbx/pixel/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/pixel copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/parameter_errors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/stage_two_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/base_refiner.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/monoclinic.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/tetragonal.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/orthorhombic.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/hexagonal.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/stage_two_refiner.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/parameters.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/hopper_ensemble_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/phil.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/hopper_io.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/psf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/hopper_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/ensemble_refine_launcher.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/prep_stage2_input.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/device.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/attr_list.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/diffBragg/mpi_logger.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /<>/.pybuild/cpython3_3.12/build/simtbx/kokkos/tst_kokkos_lib.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/kokkos copying /<>/.pybuild/cpython3_3.12/build/simtbx/kokkos/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/kokkos copying /<>/.pybuild/cpython3_3.12/build/smtbx_array_family_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/iotbx_ccp4_map_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/smtbx_refinement_least_squares_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_metric_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_masks_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_sgtbx_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/wxtbx/browser.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/process_control.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/layout.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/polygon.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/ensemble_validation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/mtz_dump.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/heavy_atoms.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/xtriage.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/errors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/app.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/reports/blast.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports copying /<>/.pybuild/cpython3_3.12/build/wxtbx/reports/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports copying /<>/.pybuild/cpython3_3.12/build/wxtbx/reports/pdb_symmetry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports copying /<>/.pybuild/cpython3_3.12/build/wxtbx/wx4_compatibility.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/checklistctrl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/info_panels.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/custom_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/metallicbutton.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/tables.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/symmetry_dialog.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/listeditor.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/sequence_view.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/misc_dialogs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/icons.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/plots/molprobity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots copying /<>/.pybuild/cpython3_3.12/build/wxtbx/plots/emringer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots copying /<>/.pybuild/cpython3_3.12/build/wxtbx/plots/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots copying /<>/.pybuild/cpython3_3.12/build/wxtbx/qstat_view.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line/loggraph.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line/xtriage.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line/inspect_r_free_flags.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line/anomalous_differences_histogram.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line/pdb_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line/wxpython.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line/plot_anomalous_scattering.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line/show_file_info.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line/b_plot.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line/plan_sad_experiment.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/wxtbx/command_line/pdb_editor.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/wxtbx/anomalous_scattering.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/windows.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/b_plot.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/segmentedctrl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/adp_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/monitor.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/intctrl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/choice_multi.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/ints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/numbers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/strctrl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/tree.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/symop.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/choice.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/text_base.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/space_group.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/array_label.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/path.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/boolctrl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/floatctrl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/misc_ctrls.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/simple_dialogs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/tribool.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/strings.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/floats.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/unit_cell.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /<>/.pybuild/cpython3_3.12/build/wxtbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/path_dialogs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/polygon_db_viewer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/bitmaps.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/wxtbx/pdb_editor.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/boost_python_meta_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_emma_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_maptbx_bcr_bcr_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_tls_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_french_wilson_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_den_restraints_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_covariance_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_maptbx_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_math_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/fftw3tbx/tst_ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx copying /<>/.pybuild/cpython3_3.12/build/fftw3tbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx copying /<>/.pybuild/cpython3_3.12/build/fftw3tbx/libtbx_refresh.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx_building_loop_closure_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_statistics_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_reference_coordinate_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_dmtbx_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_pair_interaction_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/smtbx_structure_factors_direct_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_uctbx_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/boost_rational_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_max_lik_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_geometry_sphere_surface_sampling_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_multipolar_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/regression_test_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/iotbx_dsn6_map_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_asymmetric_map_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/spotfinder_distltbx_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cma_es_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/rstbx_indexing_api_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_eltbx_xray_scattering_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_scaling_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_stl_vector_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/dxtbx_masking_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/hybrid_times.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/run_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/graph_structure_comparison.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/maximum_clique.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/utility.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/connected_component_algorithm.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/metric.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/breadth_first_search.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/minimum_cut_enumerate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/min_cut_max_flow.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/clustering_algorithm.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/optional.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/tuple.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/std_pair.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/rational.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/python.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/double_overflow.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/show_platform_info.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/inexact.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/lcm.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/divide_by_zero.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/show_environ_usage.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/int_overflow.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/gcd.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/segmentation_fault.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx/libtbx_refresh.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx_imageset_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/iotbx_detectors_bruker_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/smtbx_refinement_constraints_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx/multipolar.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/math_module.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/dmtbx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/view_fft_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/space_subgroups.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/neutron_structure_factors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/unit_cell_refinement.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/tst_phase_o_phrenia.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/tst_exp_i_alpha_derivatives.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/all_axes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/ccp4_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/miller_transform.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/fft_map_electron_density_around_atom.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/lebedev_2005_perturbation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/reduced_cell_two_folds.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/exp_i_alpha_derivatives.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/cr2o3_primitive_cell.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/tst_structure_factor_derivatives_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus/sites_derivatives.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus/site_derivatives.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus/u_star_derivatives.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/g_exp_i_alpha_derivatives.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/tst_space_subgroups.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/analyze_adp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_derivatives_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_derivatives_3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/maximum_subgroups.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/f_model_example.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/steve_collins.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/change_hand_p31.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/list_non_principal_continuous_shifts.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/symops_530.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/tst_structure_factor_derivatives_4.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/le_page_1982_vs_lebedev_2005.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/space_group_matrices.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/map_skewness.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging/test_levenberg_sparse.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa/per_lattice_postrefinement.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa/scale.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa/join.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging/sigma_correction.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging/task4.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging/tst_permutations.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging/data_subset.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging/test1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging/show_results.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging/data_utilities.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging/test_cc_half.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/merging/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_derivatives.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/sub_group_graph.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/trigonal_r_vs_tetragonal_i.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/miller_common_sets.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/tst_g_exp_i_alpha_derivatives.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/find_distances_using_cpp_objects.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/find_sys_abs_equiv_space_groups.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/site_symmetry_constraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/random_puckers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/unit_cell_minimizers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/tst_structure_factor_derivatives_3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/hirshfeld_test.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/location_part.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/g_exp_i_partial_derivatives.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/random_f_calc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/cr2o3_consistency_checks.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_derivatives_4.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/adp_symmetry_constraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/convert_ccp4_symop_lib.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/tst_structure_factor_derivatives.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/site_symmetry_table.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/quartz_structure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/getting_started.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/examples/phase_o_phrenia.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /<>/.pybuild/cpython3_3.12/build/cctbx/covariance/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/covariance copying /<>/.pybuild/cpython3_3.12/build/cctbx/french_wilson.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/run_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/real_space_refinement_simple.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/auto_sharpen.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/segment_and_split_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_interpolation_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/box.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/refine_sharpening.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/mem.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_atom_curves.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_bcr.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/resolution_from_map_and_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/prepare_map_for_docking.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/minimization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_resolution_from_map_and_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/mask.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_atom_radius_as_central_peak_width.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_interpolation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/refine_scales_errors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_loft.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_target_and_gradients.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/map_symmetry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_ccp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_get_percentile_cutoffs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_asymmetric_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/bcr/bcr.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/bcr copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/bcr/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/bcr copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_real_space_refinement_simple.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_peak_volume_estimate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_map_peak_3d_as_2d.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_mask.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/neutron/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/neutron copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/from_scatterers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/global_counters.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/gradients_fft.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/from_scatterers_fft.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/from_scatterers_direct.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/misc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/gradients_base.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/from_scatterers_direct_parallel.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/gradient_flags.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/gradients_direct.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/gradients.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/observations/tst_observations.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/observations copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/observations/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/observations copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/scatterer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/minimization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/target_functors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/weighting_schemes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/targets/tst_shelxl_wght_ls.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/targets/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/targets/tst_r1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/targets/r1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/observation_types.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /<>/.pybuild/cpython3_3.12/build/cctbx/xray/structure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/fmt_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/debug_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/tst_cns_epsilon.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/structure_factor_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/approx_amplitude_vs_resolution.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/space_group_option_parser.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/direct_or_fft.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/make_settings.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/random_structure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/github.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/electron_density_sampling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/run_shelx76.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/tst_cns_hl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/create_models_or_maps.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/make_cns_input.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/cns_density_modification.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/development/run_shelx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/macro_mol/rotation_parameters.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/macro_mol copying /<>/.pybuild/cpython3_3.12/build/cctbx/macro_mol/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/macro_mol copying /<>/.pybuild/cpython3_3.12/build/cctbx/crystal/reindex.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /<>/.pybuild/cpython3_3.12/build/cctbx/crystal/tst_super_cell.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /<>/.pybuild/cpython3_3.12/build/cctbx/crystal/tst_distance_based_connectivity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /<>/.pybuild/cpython3_3.12/build/cctbx/crystal/burzlaff_zimmermann_dewolff.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /<>/.pybuild/cpython3_3.12/build/cctbx/crystal/super_cell.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /<>/.pybuild/cpython3_3.12/build/cctbx/crystal/find_best_cell.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /<>/.pybuild/cpython3_3.12/build/cctbx/crystal/distance_based_connectivity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /<>/.pybuild/cpython3_3.12/build/cctbx/crystal/direct_space_asu.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /<>/.pybuild/cpython3_3.12/build/cctbx/crystal/tst_ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /<>/.pybuild/cpython3_3.12/build/cctbx/crystal/close_packing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /<>/.pybuild/cpython3_3.12/build/cctbx/crystal/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /<>/.pybuild/cpython3_3.12/build/cctbx/crystal/coordination_sequences.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_geometry_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_geometry_restraints_lbfgs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_grouped_data.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_diffuse.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_fft_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_reciprocal_space_asu.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_show_cosets.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_pointgroup_tools.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_r_free_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_loc_res.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_fast_nv1995.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_maptbx_mask.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_pair_asu_table.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_amplitude_normalisation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_change_basis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_space_group_type_tidy_cb_op_t.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_wilson_plot.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_triplet_generator.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_fcalc_fft_stability.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_mem_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_adp_constraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_find_best_cell.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_refine_xray_curvs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_expand_to_p1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_lookup_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_coordination_sequences.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_data_manipulation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_reflection_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_crystal.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_statistics_graphs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_web_change_basis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_lattice_symmetry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_harker.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_map_is_periodic.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sf_low_res_accuracy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_grm_modifications.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_french_wilson.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_twin_target.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_denominators.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_map_weights_for_symmetry_summation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_direct_scaling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_wavelength_units.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_connectivity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_grm_pickling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_tidy_pickling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_crystal_asu_clusters.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_adp_aniso_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray_fast_gradients.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_krivy_gruber.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_double_step_filtration.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_geometry_restraints_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_maptbx_box.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray_derivatives.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_adp_constraints_cartesian.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_subgroups.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_f_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_prepare_map_for_docking.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray_minimization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_direct_space_asu.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_connectivity_allsym.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_weighting_schemes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_emma.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray_minimization_failure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_site_constraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_fourier_transform_real_part_at_x.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_create_models_or_maps.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_merge_equivalents.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray_target_functors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sphericity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_mem.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_crystal_close_packing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sampled_model_density.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_itvb_2001_table_a1427_hall_symbols.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_math_module.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_special_op_simplifier.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/regression/tst_maptbx_structure_factors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/plane_groups.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/cosets.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/sys_abs_equiv.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/rational_matrices_point_groups.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/reticular_twin_laws.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/proto/tst_asu.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/proto/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/facet_analysis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/check_redundancies.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/short_cuts.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/cut_plane.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/reference_table.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/show_cosets.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/reticular_pg_tools.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/pointgroup_tools.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/symbol_confidence.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/subgroups.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/lattice_symmetry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/literal_description.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/sub_lattice_tools.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/harker.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/sgtbx/bravais_types.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/icsd_radii.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/tiny_pse.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/neutron.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/formula.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/sasaki.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/fp_fdp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/combine_fits.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/create_n_gaussian_raw_cpp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/format_gaussian_fits.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/rez_rez_grant.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/itvc_approx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/itvc_fits.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/kissel_fits.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/itvc_kissel.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/hydrogen_plots.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/itvc_cross_validation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/itvc_section61_io.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/kissel_io.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/e_scattering_plots.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/van_der_waals_radii.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/e_scattering.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/distance_based_connectivity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/henke.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/xray_scattering/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/xray_scattering copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/attenuation_coefficient.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/chemical_elements.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/read_custom_scattering_dict.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/covalent_radii.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/gaussian_fit.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/eltbx/wavelengths.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/euclidean_model_matching.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry copying /<>/.pybuild/cpython3_3.12/build/cctbx/source_generators/eltbx/generate_henke_cpp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/source_generators/eltbx/generate_sasaki_cpp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/source_generators/eltbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/source_generators/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators copying /<>/.pybuild/cpython3_3.12/build/cctbx/source_generators/flex_fwd_h.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators copying /<>/.pybuild/cpython3_3.12/build/cctbx/crystal_orientation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/merging/brehm_diederichs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/merging copying /<>/.pybuild/cpython3_3.12/build/cctbx/merging/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/merging copying /<>/.pybuild/cpython3_3.12/build/cctbx/run_examples.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/adp_restraints/tst_ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/adp_restraints/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/adp_restraints/energies.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/adp_restraints/flags.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/shelx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/frac_cart.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/change_hand.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/guide_to_notation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/jv_index.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/jv_asu.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/jvx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/web_links.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/dispatcher.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/all_axes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/change_basis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/cgi_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/io_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/multiple_cell.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/libtbx_help.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/wyckoff.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/replay.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/browse_settings.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/structure_factors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/structure_factors_pdb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/explore_symmetry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/emma.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/lattice_symmetry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/iotbx_cif_validate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/change_setting.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/web/phase_o_phrenia.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /<>/.pybuild/cpython3_3.12/build/cctbx/array_family/flex.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/array_family copying /<>/.pybuild/cpython3_3.12/build/cctbx/array_family/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/array_family copying /<>/.pybuild/cpython3_3.12/build/cctbx/symmetry_search.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/uctbx/reduction_base.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/uctbx/gruber_1973.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/uctbx/gruber_1973_table_1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/uctbx/determine_unit_cell/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/determine_unit_cell copying /<>/.pybuild/cpython3_3.12/build/cctbx/uctbx/krivy_gruber_1976.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/uctbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_proxy_registry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_angle_derivs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/linking_class.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_process_nonbonded_proxies.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/auto_linking_types.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/base_geometry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/distance_least_squares.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/standard_cif_links.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/lbfgs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/process_nonbonded_proxies.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/energies.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_nonbonded_overlaps.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/nonbonded_overlaps.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/flags.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_motif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/cctbx/masks/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/masks copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/auto_sharpen.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/segment_and_split_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/wavelength_units.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/samosa_scale.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/precession_view.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/version.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/diffuse.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/euclidean_model_matching.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/structure_factor_timings.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/space_group_info.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/cod_select_and_pickle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/brehm_diederichs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/find_reticular_twin_laws.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/cctbx_test_nightly.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/subgroups.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/samosa_join.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/xray_structure.show.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/eltbx.show_fp_fdp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/command_line/form_factor_query.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /<>/.pybuild/cpython3_3.12/build/cctbx/statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/translation_search.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/r_free_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/miller/tst_reindexing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller copying /<>/.pybuild/cpython3_3.12/build/cctbx/miller/reindexing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller copying /<>/.pybuild/cpython3_3.12/build/cctbx/miller/display.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller copying /<>/.pybuild/cpython3_3.12/build/cctbx/miller/tst_map_to_asu_isym.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller copying /<>/.pybuild/cpython3_3.12/build/cctbx/miller/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller copying /<>/.pybuild/cpython3_3.12/build/cctbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/libtbx_refresh.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/anharmonic.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx/omz/tst_dev.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /<>/.pybuild/cpython3_3.12/build/cctbx/omz/tst_bfgs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /<>/.pybuild/cpython3_3.12/build/cctbx/omz/tardy_adaptor.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /<>/.pybuild/cpython3_3.12/build/cctbx/omz/dev.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /<>/.pybuild/cpython3_3.12/build/cctbx/omz/cod_refine.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /<>/.pybuild/cpython3_3.12/build/cctbx/omz/cif_refine.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /<>/.pybuild/cpython3_3.12/build/cctbx/omz/cod_select_and_pickle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /<>/.pybuild/cpython3_3.12/build/cctbx/omz/bfgs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /<>/.pybuild/cpython3_3.12/build/cctbx/omz/eval_iso_vs_refined.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /<>/.pybuild/cpython3_3.12/build/cctbx/omz/pdb_dev.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /<>/.pybuild/cpython3_3.12/build/cctbx/omz/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /<>/.pybuild/cpython3_3.12/build/cctbx/adptbx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /<>/.pybuild/cpython3_3.12/build/cctbx_eltbx_covalent_radii_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx/grow_density.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/map_tools.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/kinemage/validation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage copying /<>/.pybuild/cpython3_3.12/build/mmtbx/kinemage/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage copying /<>/.pybuild/cpython3_3.12/build/mmtbx/real_space_correlation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/maps/tst_correlation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /<>/.pybuild/cpython3_3.12/build/mmtbx/maps/tst_composite_omit_map_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /<>/.pybuild/cpython3_3.12/build/mmtbx/maps/kick.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /<>/.pybuild/cpython3_3.12/build/mmtbx/maps/fem.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /<>/.pybuild/cpython3_3.12/build/mmtbx/maps/polder.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /<>/.pybuild/cpython3_3.12/build/mmtbx/maps/correlation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /<>/.pybuild/cpython3_3.12/build/mmtbx/maps/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /<>/.pybuild/cpython3_3.12/build/mmtbx/maps/mtriage.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /<>/.pybuild/cpython3_3.12/build/mmtbx/maps/tst_composite_omit_map_3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /<>/.pybuild/cpython3_3.12/build/mmtbx/maps/tst_map_model_cc_and_vals_per_atom_xtal.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /<>/.pybuild/cpython3_3.12/build/mmtbx/maps/fobs_minus_fobs_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /<>/.pybuild/cpython3_3.12/build/mmtbx/maps/superpose.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /<>/.pybuild/cpython3_3.12/build/mmtbx/maps/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /<>/.pybuild/cpython3_3.12/build/mmtbx/maps/tst_composite_omit_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /<>/.pybuild/cpython3_3.12/build/mmtbx/maps/map_model_cc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /<>/.pybuild/cpython3_3.12/build/mmtbx/maps/composite_omit_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /<>/.pybuild/cpython3_3.12/build/mmtbx/invariant_domain.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_4.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_validate_H.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_fd_3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/connectivity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_fd_5.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/riding.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_8.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_add_hydrogen_3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_fd_1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_coefficients.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_fd_4.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_7.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_minimize.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_add_hydrogen_0.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/parameterization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_5.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/find.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_add_hydrogen_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_connectivity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_9.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_fd_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/build_hydrogens.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/validate_H.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/specialised_hydrogen_atoms.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_6.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_add_hydrogen.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/reduce_hydrogen.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename/suitenout.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename/mainchain.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename/transdent.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename/suiteninput.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename/dualparse.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename/suiteninit.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename/suitenamedefs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename/diangle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename/suitealyze.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename/suitename.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /<>/.pybuild/cpython3_3.12/build/mmtbx/suitename/suites.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /<>/.pybuild/cpython3_3.12/build/mmtbx/sisa/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa copying /<>/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_util.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /<>/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_input.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /<>/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_ga.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /<>/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_optimize.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /<>/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_mtz.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /<>/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_masks.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /<>/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /<>/.pybuild/cpython3_3.12/build/mmtbx/polygon/tst_gui.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon copying /<>/.pybuild/cpython3_3.12/build/mmtbx/polygon/tst_polygon_data.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon copying /<>/.pybuild/cpython3_3.12/build/mmtbx/polygon/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon copying /<>/.pybuild/cpython3_3.12/build/mmtbx/polygon/output.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon copying /<>/.pybuild/cpython3_3.12/build/mmtbx/polygon/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon copying /<>/.pybuild/cpython3_3.12/build/mmtbx/alignment/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/alignment copying /<>/.pybuild/cpython3_3.12/build/mmtbx/run_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/tls/analysis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/tls/tls_as_xyz.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/tls/optimise_amplitudes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/tls/perm15.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/tls/command_line.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/tls/perm10.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/tls/perm12.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/tls/perm13.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/tls/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/tls/perm14.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/tls/ladp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/tls/tools.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/tls/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/tls/decompose.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/tls/perm11.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/model_vs_data.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/disorder/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /<>/.pybuild/cpython3_3.12/build/mmtbx/disorder/tst_analyze_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /<>/.pybuild/cpython3_3.12/build/mmtbx/disorder/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /<>/.pybuild/cpython3_3.12/build/mmtbx/disorder/backbone.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /<>/.pybuild/cpython3_3.12/build/mmtbx/disorder/tst_backbone.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /<>/.pybuild/cpython3_3.12/build/mmtbx/disorder/analyze_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /<>/.pybuild/cpython3_3.12/build/mmtbx/domains_from_pae.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/den/refinement.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den copying /<>/.pybuild/cpython3_3.12/build/mmtbx/den/plot_weights.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den copying /<>/.pybuild/cpython3_3.12/build/mmtbx/den/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den copying /<>/.pybuild/cpython3_3.12/build/mmtbx/solvent/map_to_water.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/solvent/ensemble_ordered_solvent.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/solvent/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/solvent/ordered_solvent.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/extend_sidechains.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/tst_make_library.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/tst_extend_sidechains_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/make_library.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/minimize_chain.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/berkeley_ramalyze.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/custom_gm.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/ccd.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/starting_conformations.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/cablam_idealization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/ligands/lifi.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/ligands/tst_00.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/ligands/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/tst_extend_sidechains.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/loop_idealization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /<>/.pybuild/cpython3_3.12/build/mmtbx/building/merge_models.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /<>/.pybuild/cpython3_3.12/build/mmtbx/f_model/f_model_info.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/f_model/f_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/f_model/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/utils/tst_switch_rotamers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /<>/.pybuild/cpython3_3.12/build/mmtbx/utils/ntc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /<>/.pybuild/cpython3_3.12/build/mmtbx/utils/rotatable_bonds.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /<>/.pybuild/cpython3_3.12/build/mmtbx/utils/fab_elbow_angle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /<>/.pybuild/cpython3_3.12/build/mmtbx/utils/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /<>/.pybuild/cpython3_3.12/build/mmtbx/utils/grid2d.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /<>/.pybuild/cpython3_3.12/build/mmtbx/twinning/probabalistic_detwinning.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning copying /<>/.pybuild/cpython3_3.12/build/mmtbx/twinning/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning copying /<>/.pybuild/cpython3_3.12/build/mmtbx/twinning/twin_f_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning copying /<>/.pybuild/cpython3_3.12/build/mmtbx/model/restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/model/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/model/statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/model/model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/model/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/real_space/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/real_space/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/example2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/scaler.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/example.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/f_model_all_scales.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_aniso_scaler.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/multi_mask_bulk_solvent.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/mosaic.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/kbu_refinery.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_mosaic.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_flat_nonuniform.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_bulk_solvent_and_scaling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/bulk_solvent_and_scaling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_scaler.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /<>/.pybuild/cpython3_3.12/build/mmtbx/chemical_components/cif_parser.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components copying /<>/.pybuild/cpython3_3.12/build/mmtbx/chemical_components/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components copying /<>/.pybuild/cpython3_3.12/build/mmtbx/chemical_components/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder_1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_probe.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_msa.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_isomorphous_difference_misc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_maps_misc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_model_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_angle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_ligand_ncs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_process_predicted_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_geo_min_restraints_phil.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_table_one.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_real_space_correlation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_schrodinger_interface.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_adp_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_refine_anomalous_substructure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_add_arrows_on_plot.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_command_line_input.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_reduce_timeout.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_map_coeffs_simple.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_sequence_validation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_loop_closure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_multi_residue_class.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_ringer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_fmodel.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_cis_trans_peptide_link.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_4muy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_get_t_scheme.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls_analysis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls_optimise_amplitudes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_01.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_00.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_04.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls_refinement_fft.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_2igd.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls_as_xyz.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_02.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_03.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/make_fake_anomalous_data.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_helix_sheet_recs_as_pdb_files.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_cablam.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder_ccs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_add_h_to_water.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_flipping_his.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_model_vs_sequence.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_cif_as_mtz_wavelengths.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_find_ncs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_ml_estimate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_pdbtools.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_statistics_output.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_validate_ligands.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_utils_merge_models.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_get_vdw_radii.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_remove_alternative_conformations.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_mtrix.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_cart_ref_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_ramachandran.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_dedeuterate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_biomt_mtrix.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_symmetry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_merge.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_biomt_mtrix_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_ncs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_tors_ref_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_neutralize_scatterers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_set_hydrogen_bond_length.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_geometry_minimization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_cc_star.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_alignment.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_map_type_parser.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_chain_comparison.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_fix_rotamer_outliers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_fmodel_misc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_prune_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_regularize_from_pdb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder_3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_rank_scale_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_apply_cif_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_altloc_chain_break.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_model_vs_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_origin_ids.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_ncs_search_flips.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_ncs_restraints_group_list.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_geometry_minimization_ncs_constraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints_real_space.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_ncs_search.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_ncs_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_mtz2map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_domains_from_pae.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_models_to_from_chains.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_rigid_bond_test.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_dynamics_cli.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_map_model_cc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_examples.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_sort_hetatms.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_find_ss_structure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_clashes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_minimize_chain.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_fmodel_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_special_term_at_end.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_scattering_type_registry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_metal_link_1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_fmodel_fd.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_psi_phi_extraction.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder_box.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_fmodel_no_cryst1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_validation_summary.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_altloc_remediate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_reduce.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_sampled_model_density.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_anomalous_substructure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_superpose.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_validate_mg.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pick_approx_zn.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_validate_ca.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_geometries.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/geometry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/identify.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/environment.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pick_k.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pick_ca_svm.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pickle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_environment.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/svm/dump_sites.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/svm/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/svm/tst_classifier.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/svm/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_symmetry_axis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_parameters.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/build.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pick_ca.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pick_mg.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ions/halides.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /<>/.pybuild/cpython3_3.12/build/mmtbx/process_predicted_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/tst_segid.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/ss_validation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/secondary_structure_params.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/tst_insertion_codes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/proteins.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/find_ss_from_ca.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/regularize_from_pdb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/nucleic_acids.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/tst_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/ss_idealization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/tst_3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/tst_1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/tst_io.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/tst_ss_id_ncs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /<>/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /<>/.pybuild/cpython3_3.12/build/mmtbx/rsr/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rsr copying /<>/.pybuild/cpython3_3.12/build/mmtbx/rsr/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rsr copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry/altloc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry/topology.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry/clash.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry/shared_types.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry/sphere_surface_sampling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry/asa.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry/indexing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /<>/.pybuild/cpython3_3.12/build/mmtbx/restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/rotamer/ramachandran_eval.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /<>/.pybuild/cpython3_3.12/build/mmtbx/rotamer/tst_geostd_vs_sidechain_angles_props.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /<>/.pybuild/cpython3_3.12/build/mmtbx/rotamer/nqh.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /<>/.pybuild/cpython3_3.12/build/mmtbx/rotamer/ramachandran_eval_deprecated.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /<>/.pybuild/cpython3_3.12/build/mmtbx/rotamer/graphics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /<>/.pybuild/cpython3_3.12/build/mmtbx/rotamer/tst_rotamer_eval.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /<>/.pybuild/cpython3_3.12/build/mmtbx/rotamer/rotamer_eval.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /<>/.pybuild/cpython3_3.12/build/mmtbx/rotamer/n_dim_table.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /<>/.pybuild/cpython3_3.12/build/mmtbx/rotamer/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /<>/.pybuild/cpython3_3.12/build/mmtbx/rotamer/sidechain_angles.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/cif_triage.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_metal_coordination.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_cif_triage.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_correct_hydrogens.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/idealized_aa.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_selection.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_chg.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_geo_reduce_for_tardy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_rna_dna_interpretation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/pdb_interpretation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/populate_auto_linking_origin_ids.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_pdb_interpretation_ncs_processing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_tyr_from_gly_and_bnz.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_iron_sulfur_clusters.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/correct_hydrogen_geometries.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_glyco_coordination.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_cif_types.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_superpose_ideal.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/server.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/rotamer_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_rotamer_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/linking_mixins.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/conformation_dependent_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/linking_setup.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_protein_interpretation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/cif_types.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_carbo_linking.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_linking.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_idealized_aa.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/rna_sugar_pucker_analysis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/glyco_chiral_values.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/glyco_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/hydrogen_restrictions.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_paral_geo.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_all_cif_files.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_pdb_interpretation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_neutron_distance.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_pdb_interpretation_3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_deuterium_terminii.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_pdb_interpretation_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_server.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/conv_v2_v3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/linking_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_glyco_hand.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_rna_sugar_pucker_analysis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_motif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/bondlength_defaults.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/pdb_distances.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/cbd_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/barbed_wire_analysis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/analyze_peptides.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/waters.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/ligands.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/cbetadev.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/model_properties.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/ensembles.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/mean_devs_VAL_THR_ILE_phi_psi.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/comparama.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/chain_comparison.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/evalurama.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/probescore_ligand.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/mp_geo.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/kinemage_templates.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/datasets.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_experimental.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_waters.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_mp_geo_endtoend.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_find_region_max_value.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_omegalyze.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_mp_validate_bonds.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_rama_z_01.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_chiral_validation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_mp_geo.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/run_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_cablam.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_undowser.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_keep_hydrogens.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_do_flips_clashscore.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_rna_validate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_rama_z_02.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_clashscore.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_model_properties.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_mp_geo_chiral_volume_cases.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_ramalyze2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_cbetadev.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_suitename.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_5.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_arguments.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_symmetry_SS.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_cbetadev_02.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_ramalyze.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_clashscore_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_hydrogen_addition_clashscore.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_4.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_cablam_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_rotalyze.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/mp_validate_bonds.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/graphics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/ramalyze.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/sequence.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/cablam.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/ramachandran/convert_from_text.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ramachandran copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/ramachandran/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ramachandran copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/experimental.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/mean_devs_others_phi_psi.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/fav_lists.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/comprehensive_residue.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/undowser.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/rna_validate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/rotalyze.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/rama_z.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/clashscore.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/omegalyze.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/validate_ligands.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/convert_lists.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/validation/mean_devs_PRO_phi_psi.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /<>/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_05.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /<>/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_02.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /<>/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/pair_interaction.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /<>/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_00.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /<>/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_04.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /<>/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_01.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /<>/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /<>/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_03.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/atom_selection.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/arginine_geometry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/ss_validation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/barbed_wire_analysis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/reduce2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/ss_idealization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/probescore_ligand.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/quantum_interface.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/cbetadev.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/ntc_validation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/suitename_old.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/polder.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/probe2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/prepare_pdb_deposition.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/comparama.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/evalurama.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/rna_validate_puckers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/rna_validate_suites.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/process_predicted_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/mp_validate_bonds.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/emringer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/water_b_factors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/mask.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/ramalyze.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/chiral_validation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/cablam.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/hydrogenate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/cablam_idealization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/suitename.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/undowser.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/rna_validate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/pdbtools.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/rotalyze.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/rna_validate_bonds.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/pdb_as_cif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/rama_z.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/hbond.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/nonbonded_overlaps.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/clashscore.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/omegalyze.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/programs/validate_ligands.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/arrays.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/f_model_info.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/proq2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_refinement_flags.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_real_space_simple.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_select_best_starting_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_anomalous_scatterer_groups.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/rigid_body.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/print_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/tardy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/targets.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/select_best_starting_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_misc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/minimization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/refinement_flags.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/geometry_minimization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/adp_refinement.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/group.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_group.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/inspect_tardy_trajectory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_rigid_body.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/fit_his.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/fit_water.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_1H.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/individual_sites.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/flipbase.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_weight.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_individual_sites_3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_0.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_aa_residue_axes_and_clusters.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/rigid_body.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_selection.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_flipbase.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_monitor.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_5.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_individual_sites_1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_rigid_body.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/fit_residue.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/weight.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_1H.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_7.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_0H.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/adp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/fit_small_molecule.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_4.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_individual_sites_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/explode_and_refine.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_4.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_6.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_water.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/occupancy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_6.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/fit_residues.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_5.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_group_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/flip_peptide_side_chain.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/wx_tardy_pdb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/orca.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/weights_params.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/minimization_ncs_constraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/anomalous_scatterer_groups.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_fit_rotamers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/energy_monitor.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/ensemble_refinement/ensemble_probability.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/ensemble_refinement/ensemble_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/ensemble_refinement/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/minimization_monitor.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/occupancies.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_occupancy_selections.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ligands/electrons.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ligands/tst_ready_set_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ligands/xtal_screens.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ligands/tst_xtal_screens.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ligands/ready_set_basics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ligands/chemistry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ligands/hierarchy_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ligands/rdkit_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ligands/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ligands/ready_set_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /<>/.pybuild/cpython3_3.12/build/mmtbx/msa.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/massage_twin_detwin_data.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_bayesian_estimator.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/relative_scaling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/fa_estimation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/xtriage.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/fest.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/bayesian_estimator.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/pair_analyses.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/mean_f_rms_f.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_massage_data.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/rip_scale.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_plan_sad_experiment.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_mean_f_rms_f.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_scaling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/twmad_scale.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/absolute_scaling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/data_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_xtriage_twin_analyses.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/pre_scale.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/matthews.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/twin_analyses.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/make_param.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/absence_likelihood.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/siras_scale.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/relative_wilson.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_outlier.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/ta_alpha_beta_calc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/thorough_outlier_test.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_sigmaa.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/outlier_plots.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_xtriage.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/remove_outliers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_absences.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/basic_analyses.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/sad_scale.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/absences.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/sigmaa_estimation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/plan_sad_experiment.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/random_omit.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/sir_scale.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/scaling/outlier_rejection.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /<>/.pybuild/cpython3_3.12/build/mmtbx/superpose.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/atomic_environment_vectors/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/atomic_environment_vectors copying /<>/.pybuild/cpython3_3.12/build/mmtbx/atomic_environment_vectors/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/atomic_environment_vectors copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ncs/tncs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ncs/ligands.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ncs/ncs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ncs/cartesian_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ncs/ncs_restraints_group_list.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ncs/ncs_params.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ncs/ncs_search.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ncs/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ncs/ncs_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /<>/.pybuild/cpython3_3.12/build/mmtbx/lattice.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/xmanip.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/clashes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/qm_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/tst_c_beta_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/tst_reference_coordinate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/quantum_interface.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/geo_file_parsing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/tst_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/mopac_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/ramachandran.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/c_beta.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/afitt.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/tst_ramachandran.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/reference_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/orca_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/tst_reference_coordinate2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/tst_geo_file_parsing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/quantum_restraints_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/qi_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/reference.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/base_qm_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/external.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/probe/CompareOriginalAndNewProbeAtomInfo.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe copying /<>/.pybuild/cpython3_3.12/build/mmtbx/probe/Helpers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe copying /<>/.pybuild/cpython3_3.12/build/mmtbx/probe/tst_mmtbx_probe_ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe copying /<>/.pybuild/cpython3_3.12/build/mmtbx/probe/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe copying /<>/.pybuild/cpython3_3.12/build/mmtbx/probe/AtomTypes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ias/tst_ias.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ias copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ias/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ias copying /<>/.pybuild/cpython3_3.12/build/mmtbx/masks/tst_asu_mask.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks copying /<>/.pybuild/cpython3_3.12/build/mmtbx/masks/tst_masks.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks copying /<>/.pybuild/cpython3_3.12/build/mmtbx/masks/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/find_tls_groups.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/fix_rotamer_outliers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/estimate_bijvoet_ratio.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/show_r_factors_by_shell.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/flipbase.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/grow_density.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/arginine_geometry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/extend_sidechains.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/table_one.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/maximum_entropy_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/barbed_wire_analysis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/development_fem.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/model_vs_sequence.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/reduce2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/validate_ions.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/super.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/cablam_training.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/analyze_peptides.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/monomer_library.comp_as_motif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/ss_idealization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/maps.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/pdb_atom_selection.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/xtriage.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/probescore_ligand.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/real_space_correlation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/quantum_interface.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/secondary_structure_validation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/prune_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/fest.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/tls_as_xyz.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/tls_analysis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/models_as_chains.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/mp_geo.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/development.aev.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/validate_waters.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/pdb_interpretation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/select_best_starting_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/search_pdb_symmetry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/sisa.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/rigid_bond_test.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/model_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/cbetadev.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/analyze_static_disorder.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/ntc_validation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/model_model_distances.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/suitename_old.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/partial_omit_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/model_vs_data.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/polder.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/geometry_minimization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/simulate_low_res_data.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/emringer_score.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/pdb_view_ad_hoc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/probe2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/prepare_pdb_deposition.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/get_related_ensemble.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/validate_H_cl_app.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/density_modification.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/f000.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/matthews.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/cdl_lookup.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/massage_data.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/find_peaks_holes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/r_factor_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/comparama.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/fake_f_obs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/evalurama.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/molprobity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/fmodel.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/rna_validate_puckers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/compute_map_coefficients.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/anneal_real_space.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/afitt.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/rna_validate_suites.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/process_predicted_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/water_screen.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/mp_validate_bonds.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/emringer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/ringer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/compare_ligands.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/water_b_factors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/mask.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/ssm_rmsd_for_chains.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/find_residue_in_pdb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/verify_mon_lib_data.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/rebuild_rotarama_cache.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/fetch_pdb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/ramalyze.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/chiral_validation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/helix_sheet_recs_as_pdb_files.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/cablam.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/hydrogenate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/cablam_idealization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/chains_as_models.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/validation_summary.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/afitt_fd.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/map_box.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/fobs_minus_fobs_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/refine_anomalous_substructure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/rebuild_cablam_cache.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/superpose.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/tls.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/map_to_structure_factors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/suitename.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/xmanip.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/distance_difference.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/cablam_validate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/angle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/undowser.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/map_comparison.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/fab_elbow_angle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/rna_validate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/cif_as_mtz.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/remove_outliers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/cc_star.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/dynamics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/pdbtools.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/kinemage.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/apply_ncs_to_ligand.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/rotalyze.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/real_space_diff_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/secondary_structure_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/rna_validate_bonds.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/model_vs_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/mtz2map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/show_suspicious_residues.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/rama_z.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/hbond.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/nonbonded_overlaps.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/model_idealization.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/rank_scale_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/altloc_remediate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/reciprocal_space_arrays.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/plan_sad_experiment.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/map_to_model_histogram.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/strip_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/mon_lib_cif_triage.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/clashscore.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/omegalyze.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/sort_hetatms.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/perigee.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/fmodel_simple.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/validate_ligands.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/command_line/fix_rama_outliers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam/cablam_training.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam copying /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam/cablam_res.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam copying /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam/cablam_align.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam copying /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam/cablam_fingerprints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam copying /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam/fingerprints/antiparallel_beta.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/fingerprints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam/fingerprints/antiparallel_beta_bridge.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/fingerprints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam/fingerprints/parallel_beta.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/fingerprints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam/fingerprints/regular_helix_definitions.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/fingerprints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam/fingerprints/how_to.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/fingerprints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam/fingerprints/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/fingerprints copying /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam/cablam_math.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam copying /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam/cablam_validate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam copying /<>/.pybuild/cpython3_3.12/build/mmtbx/cablam/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam copying /<>/.pybuild/cpython3_3.12/build/mmtbx/find_peaks.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/pdbtools.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/max_lik/tst_maxlik.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik copying /<>/.pybuild/cpython3_3.12/build/mmtbx/max_lik/max_like_non_uniform.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik copying /<>/.pybuild/cpython3_3.12/build/mmtbx/max_lik/tst_max_lik.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik copying /<>/.pybuild/cpython3_3.12/build/mmtbx/max_lik/maxlik.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik copying /<>/.pybuild/cpython3_3.12/build/mmtbx/max_lik/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik copying /<>/.pybuild/cpython3_3.12/build/mmtbx/nci/data_filtering.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci copying /<>/.pybuild/cpython3_3.12/build/mmtbx/nci/tst_hbond.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci copying /<>/.pybuild/cpython3_3.12/build/mmtbx/nci/skew_kurt_plot.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci copying /<>/.pybuild/cpython3_3.12/build/mmtbx/nci/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci copying /<>/.pybuild/cpython3_3.12/build/mmtbx/nci/hbond.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci copying /<>/.pybuild/cpython3_3.12/build/mmtbx/xmanip_tasks.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/reduce/InteractionGraph.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce copying /<>/.pybuild/cpython3_3.12/build/mmtbx/reduce/tst_mmtbx_reduce_ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce copying /<>/.pybuild/cpython3_3.12/build/mmtbx/reduce/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce copying /<>/.pybuild/cpython3_3.12/build/mmtbx/reduce/Movers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce copying /<>/.pybuild/cpython3_3.12/build/mmtbx/reduce/Optimizers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce copying /<>/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues/sample_rotamers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues copying /<>/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues/all_his.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues copying /<>/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues/rotamer_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues copying /<>/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues copying /<>/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues copying /<>/.pybuild/cpython3_3.12/build/mmtbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/libtbx_refresh.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/dynamics/simulated_annealing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /<>/.pybuild/cpython3_3.12/build/mmtbx/dynamics/ensemble_cd.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /<>/.pybuild/cpython3_3.12/build/mmtbx/dynamics/cartesian_dynamics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /<>/.pybuild/cpython3_3.12/build/mmtbx/dynamics/constants.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /<>/.pybuild/cpython3_3.12/build/mmtbx/dynamics/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /<>/.pybuild/cpython3_3.12/build/mmtbx/dynamics/tst_sa.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /<>/.pybuild/cpython3_3.12/build/mmtbx/dynamics/tst_cartesian_dynamics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /<>/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/rcsb_web_services.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /<>/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/tst_rcsb_web_services.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /<>/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/tst_standard_geometry_cif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /<>/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /<>/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /<>/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/standard_geometry_cif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /<>/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/tst_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /<>/.pybuild/cpython3_3.12/build/mmtbx/pdb_symmetry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/resolve_resources.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_omega_cdl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_mcl_02.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/nucleotides.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/multi_residue_cdl_class.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/mcl_sf4_coordination.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/investigate_rotamer_space.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/omega.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_cdl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_cdl_esd.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/altloc_weighting.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_mcl_01.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_rna_dna_fragments.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/rdl_database.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/metal_coordination_library.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/multi_base_class.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/testing_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/bond_angle_registry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/cdl_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/pH_dependent_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/mcl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/hpdl_database.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/rotamers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/density_dependent_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_mcl_03.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/cdl_setup.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/check_cdl_database.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/cdl_database.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_rdl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_hpdl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_cdl_nucleotides.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_pH_mechanism.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/LinkedResidues.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/hydrogen_bonding.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_multi_residue_rna.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/cdl_svl_database.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/histidines.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/omega_database.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_poly_ca_multi_residue.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/multi_residue_class.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_cis_c_n_ca.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/sf4_restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_mutli_residue.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /<>/.pybuild/cpython3_3.12/build/mmtbx/density_modification/tst_density_modification.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/density_modification copying /<>/.pybuild/cpython3_3.12/build/mmtbx/density_modification/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/density_modification copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ringer/tst_em_rscc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ringer/em_rolling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ringer/em_rscc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ringer/tst_emringer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ringer/emringer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ringer/em_scoring.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /<>/.pybuild/cpython3_3.12/build/mmtbx/ringer/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /<>/.pybuild/cpython3_3.12/build/iotbx_mtz_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_alignment_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_rigid_body_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_min_cut_max_flow_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_fftpack_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/iotbx/cli_parser.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/simple_parser.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/ranges.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/table_one.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/data_plots.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/map_tools.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/reflection_file_converter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/tst_detectors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/npy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/adsc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/macscience.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/adsc_minicbf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/edf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/noir.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/dtrek.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/hamamatsu.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/pilatus_slice.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/tst_debug_write.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/active_area_filter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/image_from_http_request.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/tst_adsc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/util/filters.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/util copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/util/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/util copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/beam_center_convention.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/tst_py_cbf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/cspad_detector_formats.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/url_support.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/raxis_nonsquare.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/marIP.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/context/config_detector.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/context/endstation_max_iv_trial.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/context/endstation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/context/spot_xy_convention.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/context/camera_convention.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/context/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/eiger.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/adsc_module.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/saturn.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/generic_detector.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/cbf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/bruker.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/tst_cbf_comp_read_meth.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/mar.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/test_raxis2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/test_mar.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/eiger_minicbf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/pilatus_minicbf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/detectorbase.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/raxis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/detectors/raxisbase.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /<>/.pybuild/cpython3_3.12/build/iotbx/examples/tst_mtz_free_flipper.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /<>/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_hierarchy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /<>/.pybuild/cpython3_3.12/build/iotbx/examples/prepare_model_for_rsr.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /<>/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_symmetry_copies.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /<>/.pybuild/cpython3_3.12/build/iotbx/examples/direct_methods_light.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /<>/.pybuild/cpython3_3.12/build/iotbx/examples/recalculate_phenix_refine_r_factors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /<>/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_split_chains.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /<>/.pybuild/cpython3_3.12/build/iotbx/examples/pdbx_mmcif_tutorial.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /<>/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_tardy_conf_sampling_simple.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /<>/.pybuild/cpython3_3.12/build/iotbx/examples/mtz_convert_free_to_work.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /<>/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_to_map_simple.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /<>/.pybuild/cpython3_3.12/build/iotbx/examples/mtz_free_flipper.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /<>/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_shake.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /<>/.pybuild/cpython3_3.12/build/iotbx/examples/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /<>/.pybuild/cpython3_3.12/build/iotbx/examples/shelx_latt_sym_to_space_group_symbol.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /<>/.pybuild/cpython3_3.12/build/iotbx/examples/libtbx_phil_examples.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /<>/.pybuild/cpython3_3.12/build/iotbx/pymol.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/scalepack/merge.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /<>/.pybuild/cpython3_3.12/build/iotbx/scalepack/crystal_symmetry_from_hkl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /<>/.pybuild/cpython3_3.12/build/iotbx/scalepack/space_group_dictionary.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /<>/.pybuild/cpython3_3.12/build/iotbx/scalepack/tst_merge.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /<>/.pybuild/cpython3_3.12/build/iotbx/scalepack/tst_no_merge_original_index.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /<>/.pybuild/cpython3_3.12/build/iotbx/scalepack/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /<>/.pybuild/cpython3_3.12/build/iotbx/scalepack/no_merge_original_index.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /<>/.pybuild/cpython3_3.12/build/iotbx/dtrek/dtrek_symmetry_dict.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek copying /<>/.pybuild/cpython3_3.12/build/iotbx/dtrek/reflnlist_reader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek copying /<>/.pybuild/cpython3_3.12/build/iotbx/dtrek/crystal_symmetry_from_ref.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek copying /<>/.pybuild/cpython3_3.12/build/iotbx/dtrek/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek copying /<>/.pybuild/cpython3_3.12/build/iotbx/format.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/solve/fpfm_reader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve copying /<>/.pybuild/cpython3_3.12/build/iotbx/solve/crystal_symmetry_from_inp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve copying /<>/.pybuild/cpython3_3.12/build/iotbx/solve/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve copying /<>/.pybuild/cpython3_3.12/build/iotbx/reflection_file_editor.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/map_model_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/run_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/crystal_symmetry_from_any.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/reflection_file_reader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_rna_dna_atom_names.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/modified_aa_names.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/atom_selection.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/remark_290_interpretation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/misc_records_output.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_secondary_structure_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_hierarchy_atom_sort.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/hybrid_36.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/records.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_read_mtrix_records_from_cif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_atom_selection_string.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/extract_rfactors_resolutions_sigma.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/secondary_structure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_hierarchy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/atom_name_interpretation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/xray_structure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/cryst1_interpretation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/nucleic_acid_codes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_tls.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_atom_selection.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_atom_name_interpretation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_pdb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/crystal_symmetry_from_pdb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_mmcif_hierarchy_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_hierarchy_flip_symmetric.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_mmcif_hierarchy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/remediation/remediator.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/remediation/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/remediation/tst_remediator.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/amino_acid_codes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/forward_compatible_pdb_cif_conversion.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/pdbe.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/mmcif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/modified_rna_dna_names.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/hierarchy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/pdb_v3_cif_conversion.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/aa_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/fetch.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_mmcif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_secondary_structure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/rcsb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_hierarchy_flip_symmetric_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/experiment_type.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/download.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/remark_2_interpretation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/remark_3_interpretation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/web_service_api.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/pdb/rna_dna_detection.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /<>/.pybuild/cpython3_3.12/build/iotbx/phil.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/cif/validation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /<>/.pybuild/cpython3_3.12/build/iotbx/cif/errors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /<>/.pybuild/cpython3_3.12/build/iotbx/cif/geometry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /<>/.pybuild/cpython3_3.12/build/iotbx/cif/citations.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /<>/.pybuild/cpython3_3.12/build/iotbx/cif/crystal_symmetry_from_cif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /<>/.pybuild/cpython3_3.12/build/iotbx/cif/restraints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /<>/.pybuild/cpython3_3.12/build/iotbx/cif/builders.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /<>/.pybuild/cpython3_3.12/build/iotbx/cif/model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /<>/.pybuild/cpython3_3.12/build/iotbx/cif/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /<>/.pybuild/cpython3_3.12/build/iotbx/cif/cod_tools.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /<>/.pybuild/cpython3_3.12/build/iotbx/cif/restraint_file_merge.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /<>/.pybuild/cpython3_3.12/build/iotbx/logfiles.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/builders_depending_on_smtbx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/kriber/strudat.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber copying /<>/.pybuild/cpython3_3.12/build/iotbx/kriber/tst_strudat.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber copying /<>/.pybuild/cpython3_3.12/build/iotbx/kriber/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_pdb_link_records.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_long_resname_1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_forward_compatible_pdb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_cif_1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_tools.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_xray_scale.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_pdb_as_cif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_sort_atoms.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_poscar.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_reindex.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_pdb_v3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_crystal_symmetry_from_any.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_long_chain_ids_1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_phil.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_restraints_merge.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_call_consistency.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_selected_hierarchy_flip.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_miller_sort_asu.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_cif_as_pdb_1atom.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_wildcard.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_model_sharpening_5.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_phases.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_external_sharpening_7.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_occupancies_rounding.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_mtz_as_cif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_pdbx_mmcif_tutorial.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_copy_select.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_group_rounding.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_reflection_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_simple_parser.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_4.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_patterson.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_atom_selections_10k.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_reflection_file_reader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_split_data_cif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_lattice_symmetry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_long_resname_4.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_fetch.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_generate_n_char_string.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_id_str.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_pdb_cif_inputs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_data_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_merging_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_export_scalepack_unmerged.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_simple_map_coefficients.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_manager_wrapping.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_user_selections.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_input.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_groups_preprocessing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_search_ligs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_mmcif_biomt_reduction_output.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_reordered_chains.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_search_broken_chain.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_without_validation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_long_resname_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_bioinformatics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_file_reader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_csv_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_data_plots.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_examples.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_mmcif_multimodel.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_long_resname_3.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_box_around_molecule.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_extract_xtal_data.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_cli_parser.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_tls_from_map_8.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_reflection_file_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_add_conformations.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_split_models.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_all_chain_ids.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_show_systematic_absences.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_pdb_as_fasta.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_mmcif_segids.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_mmcif_to_from_hierarchy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_reflection_file_editor.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/regression/tst_symmetry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /<>/.pybuild/cpython3_3.12/build/iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mrcfile copying /<>/.pybuild/cpython3_3.12/build/iotbx/mrcfile/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mrcfile copying /<>/.pybuild/cpython3_3.12/build/iotbx/poscar.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/symmetry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/programs/split_data_cif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs copying /<>/.pybuild/cpython3_3.12/build/iotbx/programs/box_around_molecule.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs copying /<>/.pybuild/cpython3_3.12/build/iotbx/programs/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs copying /<>/.pybuild/cpython3_3.12/build/iotbx/programs/unique_with_biomt.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs copying /<>/.pybuild/cpython3_3.12/build/iotbx/csv_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/phases.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/file_reader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/PrettyPrint/tables.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/PrettyPrint copying /<>/.pybuild/cpython3_3.12/build/iotbx/PrettyPrint/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/PrettyPrint copying /<>/.pybuild/cpython3_3.12/build/iotbx/data_manager/common.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /<>/.pybuild/cpython3_3.12/build/iotbx/data_manager/restraint.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /<>/.pybuild/cpython3_3.12/build/iotbx/data_manager/phil.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /<>/.pybuild/cpython3_3.12/build/iotbx/data_manager/miller_array.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /<>/.pybuild/cpython3_3.12/build/iotbx/data_manager/real_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /<>/.pybuild/cpython3_3.12/build/iotbx/data_manager/ncs_spec.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /<>/.pybuild/cpython3_3.12/build/iotbx/data_manager/map_coefficients.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /<>/.pybuild/cpython3_3.12/build/iotbx/data_manager/sequence.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /<>/.pybuild/cpython3_3.12/build/iotbx/data_manager/model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /<>/.pybuild/cpython3_3.12/build/iotbx/data_manager/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /<>/.pybuild/cpython3_3.12/build/iotbx/mtz/tst_dano.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /<>/.pybuild/cpython3_3.12/build/iotbx/mtz/tst_unmerged.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /<>/.pybuild/cpython3_3.12/build/iotbx/mtz/tst_extract_from_symmetry_lib.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /<>/.pybuild/cpython3_3.12/build/iotbx/mtz/crystal_symmetry_from_mtz.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /<>/.pybuild/cpython3_3.12/build/iotbx/mtz/extract_from_symmetry_lib.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /<>/.pybuild/cpython3_3.12/build/iotbx/mtz/tst_ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /<>/.pybuild/cpython3_3.12/build/iotbx/mtz/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /<>/.pybuild/cpython3_3.12/build/iotbx/mtz/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /<>/.pybuild/cpython3_3.12/build/iotbx/mtz/tst_miller_dict.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /<>/.pybuild/cpython3_3.12/build/iotbx/merging_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/ncs/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ncs copying /<>/.pybuild/cpython3_3.12/build/iotbx/option_parser.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/gui_tools/reflections.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /<>/.pybuild/cpython3_3.12/build/iotbx/gui_tools/models.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /<>/.pybuild/cpython3_3.12/build/iotbx/gui_tools/import_data_and_flags.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /<>/.pybuild/cpython3_3.12/build/iotbx/gui_tools/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /<>/.pybuild/cpython3_3.12/build/iotbx/gui_tools/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /<>/.pybuild/cpython3_3.12/build/iotbx/gui_tools/cif_conversions.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /<>/.pybuild/cpython3_3.12/build/iotbx/cif_mtz_data_labels.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/ccp4_map/crystal_symmetry_from_ccp4_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map copying /<>/.pybuild/cpython3_3.12/build/iotbx/ccp4_map/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map copying /<>/.pybuild/cpython3_3.12/build/iotbx/ccp4_map/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map copying /<>/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/ncbi_blast_xml.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /<>/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/xmlbuild.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /<>/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/local_blast.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /<>/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/alignment_as_hsearch.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /<>/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/homologues.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /<>/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/pubmed.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /<>/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/pdb_info.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /<>/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/ebi_wu_blast_xml.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /<>/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /<>/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/structure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.b_factor_stats.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/shelx.as_cif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/mtz.dump.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/show_distances.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/reindex.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/split_data_cif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/cbf_read.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/cns.transfer_crystal_symmetry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/cns.reflection_reader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/isomorphous_difference_patterson.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/xplor.map.show_summary.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/reflection_file_converter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/cif.validate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.join_fragment_files.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.box_around_molecule.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/french_wilson.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/simple_map_coefficients.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/reflection_file_editor.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/cns.sdb_reader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/dano_as_amplitudes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/crystal_symmetry_from_any.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/reflection_file_reader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_get_citation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/shelx.dump_as_python.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/shelx.as_xray_structure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.superpose_centers_of_mass.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_add_conformations.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.as_xray_structure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/phil.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/reflection_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.print_sequence.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/mtrix_reconstruction.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_as_fasta.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/export_scalepack_unmerged.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.hierarchy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.superpose_atoms_by_name.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/flip_symmetric_amino_acids.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/distance_least_squares.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/get_pubmed_citation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/build_phil_cache.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_remediator.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/biomt_reconstruction.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/file_reader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/poscar_as_xray_structure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/sort_atoms.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_labels_diff.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/detector_image_as_png.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_show_connectivity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/cif_as_pdb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/explore_metric_symmetry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/merging_statistics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/effective_resolution.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/dtrek.to_cns.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/r_free_flags_as_cns.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/symmetry_search.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/r_free_flags_accumulation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/emma.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/lattice_symmetry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/csv_as_mtz.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.link_as_geometry_restraints_edits.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/cif.as_miller_arrays.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/r_free_flags_completion_simple.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.insert_scale_records.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_labels_comparison.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_split_models.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_as_cif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/show_systematic_absences.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/mtz_as_cif.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/blast_pdb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/cif.as_xray_structure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/cns_as_mtz.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/unique_with_biomt.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/command_line/patterson_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /<>/.pybuild/cpython3_3.12/build/iotbx/fullprof/write_pcr.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof copying /<>/.pybuild/cpython3_3.12/build/iotbx/fullprof/read_pcr.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof copying /<>/.pybuild/cpython3_3.12/build/iotbx/fullprof/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof copying /<>/.pybuild/cpython3_3.12/build/iotbx/builders.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/wildcard.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/dsn6/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dsn6 copying /<>/.pybuild/cpython3_3.12/build/iotbx/dsn6/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dsn6 copying /<>/.pybuild/cpython3_3.12/build/iotbx/xplor/map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor copying /<>/.pybuild/cpython3_3.12/build/iotbx/xplor/tst_xplormap.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor copying /<>/.pybuild/cpython3_3.12/build/iotbx/xplor/ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor copying /<>/.pybuild/cpython3_3.12/build/iotbx/xplor/crystal_symmetry_from_map.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor copying /<>/.pybuild/cpython3_3.12/build/iotbx/xplor/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor copying /<>/.pybuild/cpython3_3.12/build/iotbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/libtbx_refresh.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/xds/geometry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /<>/.pybuild/cpython3_3.12/build/iotbx/xds/xds_cbf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /<>/.pybuild/cpython3_3.12/build/iotbx/xds/crystal_symmetry_from_hkl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /<>/.pybuild/cpython3_3.12/build/iotbx/xds/integrate_hkl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /<>/.pybuild/cpython3_3.12/build/iotbx/xds/blank_cbf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /<>/.pybuild/cpython3_3.12/build/iotbx/xds/xds_inp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /<>/.pybuild/cpython3_3.12/build/iotbx/xds/correction.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /<>/.pybuild/cpython3_3.12/build/iotbx/xds/read_ascii.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /<>/.pybuild/cpython3_3.12/build/iotbx/xds/spot_xds.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /<>/.pybuild/cpython3_3.12/build/iotbx/xds/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /<>/.pybuild/cpython3_3.12/build/iotbx/xds/xparm.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /<>/.pybuild/cpython3_3.12/build/iotbx/xds/gain_cbf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /<>/.pybuild/cpython3_3.12/build/iotbx/reflection_file_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/map_manager.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/cns/crystal_symmetry_from_sdb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /<>/.pybuild/cpython3_3.12/build/iotbx/cns/space_group_symbols.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /<>/.pybuild/cpython3_3.12/build/iotbx/cns/xray_structure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /<>/.pybuild/cpython3_3.12/build/iotbx/cns/sdb_writer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /<>/.pybuild/cpython3_3.12/build/iotbx/cns/pdb_remarks.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /<>/.pybuild/cpython3_3.12/build/iotbx/cns/miller_array.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /<>/.pybuild/cpython3_3.12/build/iotbx/cns/reflection_reader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /<>/.pybuild/cpython3_3.12/build/iotbx/cns/crystal_symmetry_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /<>/.pybuild/cpython3_3.12/build/iotbx/cns/sdb_reader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /<>/.pybuild/cpython3_3.12/build/iotbx/cns/crystal_symmetry_from_inp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /<>/.pybuild/cpython3_3.12/build/iotbx/cns/tst_cns.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /<>/.pybuild/cpython3_3.12/build/iotbx/cns/index_fobs_sigma_reader.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /<>/.pybuild/cpython3_3.12/build/iotbx/cns/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /<>/.pybuild/cpython3_3.12/build/iotbx/extract_xtal_data.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/mtrix_biomt.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /<>/.pybuild/cpython3_3.12/build/iotbx/shelx/tst_lex_parse_build.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /<>/.pybuild/cpython3_3.12/build/iotbx/shelx/crystal_symmetry_from_ins.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /<>/.pybuild/cpython3_3.12/build/iotbx/shelx/errors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /<>/.pybuild/cpython3_3.12/build/iotbx/shelx/tokens.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /<>/.pybuild/cpython3_3.12/build/iotbx/shelx/tst_hklf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /<>/.pybuild/cpython3_3.12/build/iotbx/shelx/lexer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /<>/.pybuild/cpython3_3.12/build/iotbx/shelx/writer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /<>/.pybuild/cpython3_3.12/build/iotbx/shelx/write_ins.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /<>/.pybuild/cpython3_3.12/build/iotbx/shelx/parsers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /<>/.pybuild/cpython3_3.12/build/iotbx/shelx/tst_fvar_encoding.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /<>/.pybuild/cpython3_3.12/build/iotbx/shelx/hklf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /<>/.pybuild/cpython3_3.12/build/iotbx/shelx/tst_writer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /<>/.pybuild/cpython3_3.12/build/iotbx/shelx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /<>/.pybuild/cpython3_3.12/build/iotbx/shelx/fvar_encoding.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /<>/.pybuild/cpython3_3.12/build/iotbx/shelx/fcf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /<>/.pybuild/cpython3_3.12/build/cctbx_eltbx_attenuation_coefficient_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_bulk_solvent_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_secondary_structure_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_utils_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_eltbx_sasaki_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/boost_optional_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_hydrogens_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/rstbx_simulation_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/fable_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_program_template.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/pyframe.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_dlite.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_path.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_easy_mp_multicore.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/xmlrpc_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/cli.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/code_analysis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/subprocess_with_fixes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/start_print_trace.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/easy_pickle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/math_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/objgraph.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/dlite.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/sphinx/phil.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx copying /<>/.pybuild/cpython3_3.12/build/libtbx/sphinx/python_string.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx copying /<>/.pybuild/cpython3_3.12/build/libtbx/sphinx/pubmed.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx copying /<>/.pybuild/cpython3_3.12/build/libtbx/sphinx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx copying /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling/mp_handler.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling/file_queue.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling/thread_handler.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling/result.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling/cluster_handler.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling/shared_resource.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling/stacktrace.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling/process_pool.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling/socket_queue.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling/mainthread.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling/philgen.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling/job_scheduler.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /<>/.pybuild/cpython3_3.12/build/libtbx/scheduling/parallel_for.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /<>/.pybuild/cpython3_3.12/build/libtbx/easy_mp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_representation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/citations.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/bundle/copy_all.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /<>/.pybuild/cpython3_3.12/build/libtbx/bundle/copy_build_libtbx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /<>/.pybuild/cpython3_3.12/build/libtbx/bundle/install_bat.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /<>/.pybuild/cpython3_3.12/build/libtbx/bundle/install_csh.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /<>/.pybuild/cpython3_3.12/build/libtbx/bundle/copy_runtime_sources.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /<>/.pybuild/cpython3_3.12/build/libtbx/bundle/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /<>/.pybuild/cpython3_3.12/build/libtbx/bundle/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /<>/.pybuild/cpython3_3.12/build/libtbx/run_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/object_oriented_patterns.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_citations.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/topological_sort.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/scheduling_helpers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/lsf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/remote.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/polling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/transfer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/errors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/util.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/status.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/submission.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/pbs_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/scheduling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/looping.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/communication.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/generic.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/sge_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/simplexml.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/clusterTests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/log.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/development/except_Exception.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development copying /<>/.pybuild/cpython3_3.12/build/libtbx/development/xcode_build_phase.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development copying /<>/.pybuild/cpython3_3.12/build/libtbx/development/timers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development copying /<>/.pybuild/cpython3_3.12/build/libtbx/development/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development copying /<>/.pybuild/cpython3_3.12/build/libtbx/program_utils/result.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/program_utils/statistics_info.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/program_utils/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_binary_search.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/program_template.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/str_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/subversion.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/version.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/path.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/pkg_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_scheduling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/wingide.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/xmlrpc_server_example.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/crossmingw.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/metric_prefixes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_thread_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/load_env.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_math_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/forward_compatibility.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/test_utils/parallel.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/test_utils/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/test_utils/pytest.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils copying /<>/.pybuild/cpython3_3.12/build/libtbx/configure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_xmlrpc_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/callbacks.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/complex_math.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/easy_profile.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_find_unused_imports.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/server/FileServer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /<>/.pybuild/cpython3_3.12/build/libtbx/server/SocketServer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /<>/.pybuild/cpython3_3.12/build/libtbx/server/StartServer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /<>/.pybuild/cpython3_3.12/build/libtbx/server/FileClient.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /<>/.pybuild/cpython3_3.12/build/libtbx/server/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /<>/.pybuild/cpython3_3.12/build/libtbx/server/FileSocket.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_str_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/mpi4py.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_topological_sort.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/phil/tst_experimental.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /<>/.pybuild/cpython3_3.12/build/libtbx/phil/tokenizer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /<>/.pybuild/cpython3_3.12/build/libtbx/phil/gui_objects.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /<>/.pybuild/cpython3_3.12/build/libtbx/phil/tst_tokenizer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /<>/.pybuild/cpython3_3.12/build/libtbx/phil/tst_interface.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /<>/.pybuild/cpython3_3.12/build/libtbx/phil/command_line.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /<>/.pybuild/cpython3_3.12/build/libtbx/phil/interface.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /<>/.pybuild/cpython3_3.12/build/libtbx/phil/parser.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /<>/.pybuild/cpython3_3.12/build/libtbx/phil/experimental.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /<>/.pybuild/cpython3_3.12/build/libtbx/phil/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /<>/.pybuild/cpython3_3.12/build/libtbx/phil/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /<>/.pybuild/cpython3_3.12/build/libtbx/assert_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/table_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/env_config.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/clear_paths.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/find_reference_cycles.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/option_parser.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/file_clutter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_python_code_parsing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/try_hello_world_c.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/pyplot.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/prime_factors_of.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/epydoc_run.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_build_path.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/install.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/check_libcpp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/start_binary_bundle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/help.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/dtrace.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_bin_path.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/create_install_script_bat.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/clean_clutter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/chunk.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/start_process.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_dist_paths.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/list_modules.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/find_files.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/assert_not_show_diff.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/sge_qstat_counts.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_env.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/sge_available_slots.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/install_conda.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/path_utility.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/py_compile_all.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/find_in_repositories.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_build_options.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/phil.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/make_sphinx_html.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_host_and_user.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/seconds_since_the_epoch.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/scons.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/printenv.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/raise_exception_for_testing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/git_avoid_merges.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_number_of_processors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_module_dependencies.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/import_all_ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/create_installer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/create_mac_app.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_pythonpath.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_include_paths.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/analyse_code_comments.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/add_from_future_import_division.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/list_source_files_sorted_by_size.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_lib_path.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/env_run.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/nequal.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/find_unused_imports_crude.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/find_reserved_names.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/list_files.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_commands.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/line_count.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_numpy_version.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/find_untested.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_full_command_path.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/create_unzipsfx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/remote_processing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_numeric_version.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/run_pickled_function.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_variable_names.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_all_on_path.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/create_selfx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/clear_paths.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/assert_line_count.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/make_dist.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/sphinx_build.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/import_all_python.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/run_tests_parallel.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/ipython_shell_start.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_environ_usage.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/assert_stdin.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/extract_code_from_txt.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/find_old_style_classes.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/easy_qsub.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_but_no_repr.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_python_sys_executable.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/create_windows_exe.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/wait_for_file.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/parallel_simple.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/find_unused_imports.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/find_under_build.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/bootstrap.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/create_cctbx_bundle_for_installer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/assert_stdin_contains_strings.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/remove_tree.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/bundle_as_exe.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_repository_paths.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/find_clutter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_date_and_time.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/any2unix.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/assert_stdin_ends_with.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/command_line/show_python_dependencies.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/libtbx/console_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/python_code_parsing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_easy_mp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/smart_open.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/binary_search.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/runtime_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_fully_buffered_timeout.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/cluster.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/libtbx_refresh.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_version.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/containers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_containers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_easy_mp_state.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_object_oriented_patterns.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/cpp_function_name.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_easy_pickle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/fastentrypoints.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/easy_run.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/introspection.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/progress.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_mac_pkg.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/setup_installer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/rpath.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/install_distribution.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_windows_installer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/install_conda.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_installer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_mac_app.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/package_defs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/install_base_packages.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/write_gui_dispatcher_include.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_windows_exe.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/installer_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/regenerate_module_files.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/bootstrap.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_cctbx_bundle_for_installer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/plus_installer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/auto_build/make_bundle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /<>/.pybuild/cpython3_3.12/build/libtbx/tst_runtime_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/libtbx/thread_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx_geometry_asa_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_eltbx_icsd_radii_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_reduce_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_lbfgsb_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_maximum_clique_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/dxtbx_flumpy.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_linalg_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cudatbx/math/special_functions/tst_spherical_bessel_jn.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math/special_functions copying /<>/.pybuild/cpython3_3.12/build/cudatbx/math/special_functions/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math/special_functions copying /<>/.pybuild/cpython3_3.12/build/cudatbx/math/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math copying /<>/.pybuild/cpython3_3.12/build/cudatbx/cufft/tst_ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/cufft copying /<>/.pybuild/cpython3_3.12/build/cudatbx/cufft/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/cufft copying /<>/.pybuild/cpython3_3.12/build/cudatbx/scattering/tst_direct_summation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/scattering copying /<>/.pybuild/cpython3_3.12/build/cudatbx/scattering/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/scattering copying /<>/.pybuild/cpython3_3.12/build/mmtbx_geometry_shared_types_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/boost_tuple_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_sgtbx_asu_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_f_model_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_geometry_restraints_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_breadth_first_search_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/iotbx_xplor_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/iotbx_cif_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/iotbx_shelx_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/iotbx_pdb_hierarchy_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/rstbx_simage_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_glmtbx_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/rstbx_integration_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/gltbx_util_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_xray_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_eltbx_chemical_elements_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_cablam_align_utils_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/rstbx_diffraction_fastbragg_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/omptbx/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/omptbx copying /<>/.pybuild/cpython3_3.12/build/omptbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/omptbx copying /<>/.pybuild/cpython3_3.12/build/spotfinder_dxtbx_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_r3_utils_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/qttbx/phil.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/qttbx copying /<>/.pybuild/cpython3_3.12/build/qttbx/viewers/chimerax.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/viewers copying /<>/.pybuild/cpython3_3.12/build/qttbx/viewers/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/viewers copying /<>/.pybuild/cpython3_3.12/build/qttbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/qttbx copying /<>/.pybuild/cpython3_3.12/build/prime/index_ambiguity/mod_lbfgs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity copying /<>/.pybuild/cpython3_3.12/build/prime/index_ambiguity/mod_kmeans.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity copying /<>/.pybuild/cpython3_3.12/build/prime/index_ambiguity/mod_indexing_ambiguity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity copying /<>/.pybuild/cpython3_3.12/build/prime/index_ambiguity/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_misc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_pdb.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_threads.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_results.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_gui_dialogs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_lbfgs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_gui_frames.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_merge_data.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_util.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_mx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_input.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_leastsqr.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_run.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_lbfgs_partiality.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_perf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_partiality.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_outlier.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/mod_plotter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/postrefine/postrefine.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/plot_energy_spectrum.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/spot_param_visualizer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/viewstats.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/mpi_scale.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/change_basis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/run.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/r_mtz_mtz.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/plotstats.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/prime_gui.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/solve_indexing_ambiguity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/mpi_run.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/ray_trace.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/comparestats.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/view_fineslices.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/frame_extractor_by_scan.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/change_path_indexing_ambiguity.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/print_integration_pickle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/cluster_isoform.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/explore_twin_operators.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/compare_solution_pickles.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/iotacc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/command_line/postrefine.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /<>/.pybuild/cpython3_3.12/build/prime/isoform_cluster/mod_isoform_cluster.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/isoform_cluster copying /<>/.pybuild/cpython3_3.12/build/prime/isoform_cluster/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/isoform_cluster copying /<>/.pybuild/cpython3_3.12/build/scitbx_stl_map_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_lstbx_normal_equations_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_cubicle_neighbors_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/dxtbx/nexus/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/nexus copying /<>/.pybuild/cpython3_3.12/build/dxtbx/CMakeLists.txt -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx/flumpy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx/masking/masking.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking copying /<>/.pybuild/cpython3_3.12/build/dxtbx/masking/SmarGonShadowMask.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking copying /<>/.pybuild/cpython3_3.12/build/dxtbx/masking/goniometer_shadow_masking.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking copying /<>/.pybuild/cpython3_3.12/build/dxtbx/masking/SConscript -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking copying /<>/.pybuild/cpython3_3.12/build/dxtbx/masking/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking copying /<>/.pybuild/cpython3_3.12/build/dxtbx/masking/boost_python/ext.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/error.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx/imageset.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx/imageset.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFRayonixESRF.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNexusJungfrauExt.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5Sacla.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTC.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSER.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusSOLEILPX16MSN106.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI41.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatMultiImage.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerPhotonFactory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCmlfsom.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFullPilatusDLS6MSN126.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerDLS16MSN160.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniADSCHF4M.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNexus.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFCspad.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTCEpix.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuSaturnSN09040159.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigaku.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuSaturnSN11480296.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI7d.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuSaturnSN07400090.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFBruker.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMultiTileHierarchy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5SaclaRayonix.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatBrukerPhoton.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxDLS16M.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxEigerFilewriter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxDLSI19_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI31.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDESY6MSN115.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusCHESS_6MSN127.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFF.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNexusJungfrauHack.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN915.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatRAXISIVSpring8.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatROD.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatPYunspecified.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVHamamatsuSPring8BL32XU.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVNOIR.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatRAXIS.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXDS.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCDBG.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuA200SPring8BL26B1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatStill.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTCMultipleDetectors.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFRayonix.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusHelpers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN928.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuA200.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTCCspad.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCNoDateStamp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVHamamatsu.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatBrukerFixedChi.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxEigerFilewriterESRFID232.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFullPilatusDLS300KSN104.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMini.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN445.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFRayonixXPP.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/Format.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxDLS.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerMaxIVBio.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxDLS16MI03.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEiger.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI71.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatMRC.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFull.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVJHSim.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatEDFALS733.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI51.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSNAPSID19.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatGatanDM4.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuPilatus.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5Lambda.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVTimePix_SU.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS12M.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatPYunspecifiedStill.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSC.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatus3APS19ID6MSN132.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatPilatusHelpers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatDIP2030b.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatBruker.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerPetraP14.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5EigerNearlyNexus.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatPYmultitile.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMV.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMultiTile.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatMarIP.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBF.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFullPilatus.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN457.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatMultiImageLazy.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatPY.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVCMOS1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN126.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI61.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/nxmx_writer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN920.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/README.md -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5PAL.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuEiger.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxED.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN926.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN119.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTCRayonix.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFHelpers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5EigerNearlyNexusSPring8.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNexusTimepix2M.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/nexus.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuSaturnNoTS.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuSaturn.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusXXX.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/Registry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5SaclaMPCCD.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN905.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTCJungfrau.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerChessID7B2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI32.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114DMM.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN442.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatRAXISII.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/cbf_writer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFullPilatusDLS6MSN100.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatus.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFullByteOffset.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/image.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python/nexus_ext.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python/cbf_read_buffer.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python/image_ext.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python/cbf_read_buffer.cpp -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/image.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFRayonixSPring8.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /<>/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_format_image_ext.pyi -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx/util/dlsnxs2cbf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util copying /<>/.pybuild/cpython3_3.12/build/dxtbx/util/rotate_and_average.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util copying /<>/.pybuild/cpython3_3.12/build/dxtbx/util/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util copying /<>/.pybuild/cpython3_3.12/build/dxtbx/serialize/imageset.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize copying /<>/.pybuild/cpython3_3.12/build/dxtbx/serialize/filename.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize copying /<>/.pybuild/cpython3_3.12/build/dxtbx/serialize/load.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize copying /<>/.pybuild/cpython3_3.12/build/dxtbx/serialize/xds.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize copying /<>/.pybuild/cpython3_3.12/build/dxtbx/serialize/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize copying /<>/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_ext.pyi -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx/version.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx/example/to_xds.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/example copying /<>/.pybuild/cpython3_3.12/build/dxtbx/example/resolution_corners.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/example copying /<>/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_model_ext.pyi -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/model_helpers.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/compare.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/scan_helpers.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/ray_intersection.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/detector.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/detector_helpers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/scan.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/panel_data.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/spectrum.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/pixel_to_millimeter.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/goniometer.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/parallax_correction.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/detector_helpers_types.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/virtual_panel.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/kappa_goniometer.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/experiment.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/beam.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/goniometer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/crystal.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/multi_axis_goniometer.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/detector.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/scan.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/scan_helpers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/panel.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/profile.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/experiment_list.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/experiment_list.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/crystal.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/goniometer.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/panel.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/to_from_dict.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/multi_axis_goniometer.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/parallax_correction.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/detector.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/experiment.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/kappa_goniometer.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/pixel_to_millimeter.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/spectrum.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/pickle_suite.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/beam.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/scan.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/crystal.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/model_ext.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/scan_helpers.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/experiment_list.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/model/beam.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /<>/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_masking_ext.pyi -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx/ext.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx/py.typed -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_imageset_ext.pyi -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx/array_family/flex_table_suite.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/array_family copying /<>/.pybuild/cpython3_3.12/build/dxtbx/array_family/flex_table.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/array_family copying /<>/.pybuild/cpython3_3.12/build/dxtbx/array_family/ref_pickle_double_buffered.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/array_family copying /<>/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_format_nexus_ext.pyi -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/show_registry.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/install_format.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/debug_memory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/depends_on.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/plot_detector_models.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/image_average.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/dlsnxs2cbf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/detector_superpose.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/saturation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/print_matching_images.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/show_matching_formats.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/image2pickle.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/show_mask_info.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/overload.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/read_sequence.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/print_header.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/display_parallax_correction.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/command_line/radial_average.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /<>/.pybuild/cpython3_3.12/build/dxtbx/datablock.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_flumpy.pyi -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx/sequence_filenames.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx/filecache.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx/filecache_controller.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /<>/.pybuild/cpython3_3.12/build/dxtbx/boost_python/compression.h -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/boost_python/compression.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/boost_python/flumpy.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/boost_python/ext.cpp -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/boost_python/imageset_ext.cc -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/boost_python copying /<>/.pybuild/cpython3_3.12/build/dxtbx/data/beamline_defs/PILATUS_300K_S_N_3_0104_Diamond.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs copying /<>/.pybuild/cpython3_3.12/build/dxtbx/data/beamline_defs/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs copying /<>/.pybuild/cpython3_3.12/build/dxtbx/data/beamline_defs/PILATUS_2M_S_N_24_0107_Diamond.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs copying /<>/.pybuild/cpython3_3.12/build/dxtbx/data/detectors.lib -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data copying /<>/.pybuild/cpython3_3.12/build/dxtbx/data/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data copying /<>/.pybuild/cpython3_3.12/build/mmtbx_tls_optimise_amplitudes_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/gltbx/generate_fonts_ucs_cpp.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/gl_managed.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/wx_viewer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/generate_functions_bpl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/generate_defines_bpl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/fonts.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/run_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/wx_ellipsoids_test.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/wx_viewer_leapmotion.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/quadrics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/viewer_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/util.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/extract_opengl_specs.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/gl.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/tst_viewer_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/tst_ellipsoids.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/images.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/wx_motion_on_tab.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/command_line copying /<>/.pybuild/cpython3_3.12/build/gltbx/command_line/try_imports.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/command_line copying /<>/.pybuild/cpython3_3.12/build/gltbx/wx_cube.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/glu.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/wx_scene.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/tst_fonts.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/libtbx_refresh.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/wx_viewers_images.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/gltbx/wx_viewer_example.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx_tls_utils_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/spotfinder_hough_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_adp_restraints_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_rotamer_fit_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_ncs_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/iotbx_detectors_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/iotbx_wildcard_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cootbx/hydrogens_button.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /<>/.pybuild/cpython3_3.12/build/cootbx/simple_zoom_list.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /<>/.pybuild/cpython3_3.12/build/cootbx/watch_file.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /<>/.pybuild/cpython3_3.12/build/cootbx/interactive_edit.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /<>/.pybuild/cpython3_3.12/build/cootbx/ligand_checklist.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /<>/.pybuild/cpython3_3.12/build/cootbx/validation_lists.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /<>/.pybuild/cpython3_3.12/build/cootbx/view_refinement.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /<>/.pybuild/cpython3_3.12/build/cootbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /<>/.pybuild/cpython3_3.12/build/cootbx/xmlrpc_server.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /<>/.pybuild/cpython3_3.12/build/mmtbx_geometry_clash_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/gltbx_glu_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_lbfgs_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_rsr_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/mmtbx_ncs_cartesian_restraints_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/annlib_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_clustering_algorithm_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cbflib_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/gltbx_quadrics_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_minpack_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/scitbx_suffixtree_single_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/rstbx/outlier_spots/fit_distribution.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/outlier_spots copying /<>/.pybuild/cpython3_3.12/build/rstbx/outlier_spots/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/outlier_spots copying /<>/.pybuild/cpython3_3.12/build/rstbx/detectors/silicon.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/detectors copying /<>/.pybuild/cpython3_3.12/build/rstbx/detectors/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/detectors copying /<>/.pybuild/cpython3_3.12/build/rstbx/cftbx/tst_coordinate_frame_converter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx copying /<>/.pybuild/cpython3_3.12/build/rstbx/cftbx/coordinate_frame_converter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx copying /<>/.pybuild/cpython3_3.12/build/rstbx/cftbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx copying /<>/.pybuild/cpython3_3.12/build/rstbx/cftbx/coordinate_frame_helpers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx copying /<>/.pybuild/cpython3_3.12/build/rstbx/run_tests.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx copying /<>/.pybuild/cpython3_3.12/build/rstbx/viewer/integration.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/viewer/results_base.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/viewer/calibration.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/viewer/spotfinder_frame.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/viewer/controls.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/viewer/frame.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/viewer/calibration_frame.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/viewer/processing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/viewer/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/viewer/drivers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/viewer/dataset.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/viewer/spotfinder_wrap.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/viewer/display.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/viewer/indexing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/viewer/pixels3d.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/viewer/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/bandpass/simulated_annealing.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bandpass copying /<>/.pybuild/cpython3_3.12/build/rstbx/bandpass/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bandpass copying /<>/.pybuild/cpython3_3.12/build/rstbx/new_horizons/spot_shape.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /<>/.pybuild/cpython3_3.12/build/rstbx/new_horizons/pixel_spread.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /<>/.pybuild/cpython3_3.12/build/rstbx/new_horizons/index.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /<>/.pybuild/cpython3_3.12/build/rstbx/new_horizons/stats_index.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /<>/.pybuild/cpython3_3.12/build/rstbx/new_horizons/oscillation_shots.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /<>/.pybuild/cpython3_3.12/build/rstbx/new_horizons/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /<>/.pybuild/cpython3_3.12/build/rstbx/new_horizons/speckfinder.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /<>/.pybuild/cpython3_3.12/build/rstbx/dials_core/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dials_core copying /<>/.pybuild/cpython3_3.12/build/rstbx/dials_core/integration_core.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dials_core copying /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/uc_frame.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/ring_frame.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/pyslip.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/frame.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/slip_viewer_image_factory.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/tile_generation.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/calibration_frame.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/slip_display.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/example_frame_plugin_hidden.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/score_frame.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /<>/.pybuild/cpython3_3.12/build/rstbx/apps/slip_helpers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps copying /<>/.pybuild/cpython3_3.12/build/rstbx/apps/dual_resolution_helpers.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps copying /<>/.pybuild/cpython3_3.12/build/rstbx/apps/stills/simple_integration.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /<>/.pybuild/cpython3_3.12/build/rstbx/apps/stills/deltapsi_refinement_preceding_integration.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /<>/.pybuild/cpython3_3.12/build/rstbx/apps/stills/dials_refinement_preceding_integration.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /<>/.pybuild/cpython3_3.12/build/rstbx/apps/stills/util.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /<>/.pybuild/cpython3_3.12/build/rstbx/apps/stills/stills_integration.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /<>/.pybuild/cpython3_3.12/build/rstbx/apps/stills/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /<>/.pybuild/cpython3_3.12/build/rstbx/apps/spot_markup.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps copying /<>/.pybuild/cpython3_3.12/build/rstbx/apps/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps copying /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx/ersatz_misset.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx/uc1_2_positions_idx.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx/uc1_2a.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx/compare_mosflm_xds.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx/uc1_2.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx/uc1_2_validate.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model/detector.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model copying /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model/tst_detector_model.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model copying /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model/instrument_specifics.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model copying /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model copying /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /<>/.pybuild/cpython3_3.12/build/rstbx/bpcx/uc1_2_positions.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /<>/.pybuild/cpython3_3.12/build/rstbx/utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx copying /<>/.pybuild/cpython3_3.12/build/rstbx/indexing/tst_auto_monoscan.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing copying /<>/.pybuild/cpython3_3.12/build/rstbx/indexing/tst_dataset1.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing copying /<>/.pybuild/cpython3_3.12/build/rstbx/indexing/do_index.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing copying /<>/.pybuild/cpython3_3.12/build/rstbx/indexing/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing copying /<>/.pybuild/cpython3_3.12/build/rstbx/simage/run_spotfinder.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /<>/.pybuild/cpython3_3.12/build/rstbx/simage/wx_display.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /<>/.pybuild/cpython3_3.12/build/rstbx/simage/solver.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /<>/.pybuild/cpython3_3.12/build/rstbx/simage/integrate_crude.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /<>/.pybuild/cpython3_3.12/build/rstbx/simage/refine_uc_cr.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /<>/.pybuild/cpython3_3.12/build/rstbx/simage/tst.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /<>/.pybuild/cpython3_3.12/build/rstbx/simage/create.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /<>/.pybuild/cpython3_3.12/build/rstbx/simage/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /<>/.pybuild/cpython3_3.12/build/rstbx/simage/run_labelit_index.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /<>/.pybuild/cpython3_3.12/build/rstbx/simage/explore_completeness.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /<>/.pybuild/cpython3_3.12/build/rstbx/sublattice_support/change_basis.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support copying /<>/.pybuild/cpython3_3.12/build/rstbx/sublattice_support/tst_sublattice.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support copying /<>/.pybuild/cpython3_3.12/build/rstbx/sublattice_support/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support copying /<>/.pybuild/cpython3_3.12/build/rstbx/phil/phil_preferences.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil copying /<>/.pybuild/cpython3_3.12/build/rstbx/phil/preferences.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil copying /<>/.pybuild/cpython3_3.12/build/rstbx/phil/scope.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil copying /<>/.pybuild/cpython3_3.12/build/rstbx/phil/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil copying /<>/.pybuild/cpython3_3.12/build/rstbx/indexing_api/force_cell.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /<>/.pybuild/cpython3_3.12/build/rstbx/indexing_api/nearest_neighbor.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /<>/.pybuild/cpython3_3.12/build/rstbx/indexing_api/outlier_detection.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /<>/.pybuild/cpython3_3.12/build/rstbx/indexing_api/outlier_procedure.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /<>/.pybuild/cpython3_3.12/build/rstbx/indexing_api/test_dps.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /<>/.pybuild/cpython3_3.12/build/rstbx/indexing_api/sampling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /<>/.pybuild/cpython3_3.12/build/rstbx/indexing_api/tools.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /<>/.pybuild/cpython3_3.12/build/rstbx/indexing_api/lattice.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /<>/.pybuild/cpython3_3.12/build/rstbx/indexing_api/basis_choice.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /<>/.pybuild/cpython3_3.12/build/rstbx/indexing_api/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /<>/.pybuild/cpython3_3.12/build/rstbx/array_family/flex.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/array_family copying /<>/.pybuild/cpython3_3.12/build/rstbx/array_family/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/array_family copying /<>/.pybuild/cpython3_3.12/build/rstbx/dps_core/cell_assessment.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /<>/.pybuild/cpython3_3.12/build/rstbx/dps_core/zuoreduction.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /<>/.pybuild/cpython3_3.12/build/rstbx/dps_core/constrainment.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /<>/.pybuild/cpython3_3.12/build/rstbx/dps_core/sampling.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /<>/.pybuild/cpython3_3.12/build/rstbx/dps_core/lepage.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /<>/.pybuild/cpython3_3.12/build/rstbx/dps_core/basis_choice.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /<>/.pybuild/cpython3_3.12/build/rstbx/dps_core/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /<>/.pybuild/cpython3_3.12/build/rstbx/dps_core/tst_iotbx_converter.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /<>/.pybuild/cpython3_3.12/build/rstbx/command_line/simage.explore_completeness.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /<>/.pybuild/cpython3_3.12/build/rstbx/command_line/index.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /<>/.pybuild/cpython3_3.12/build/rstbx/command_line/simage.solver.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /<>/.pybuild/cpython3_3.12/build/rstbx/command_line/viewer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /<>/.pybuild/cpython3_3.12/build/rstbx/command_line/example_viewer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /<>/.pybuild/cpython3_3.12/build/rstbx/command_line/slip_viewer.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /<>/.pybuild/cpython3_3.12/build/rstbx/command_line/simage.create.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /<>/.pybuild/cpython3_3.12/build/rstbx/command_line/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /<>/.pybuild/cpython3_3.12/build/rstbx/command_line/simage.wx_display.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /<>/.pybuild/cpython3_3.12/build/rstbx/diffraction/tst_ewald_sphere.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction copying /<>/.pybuild/cpython3_3.12/build/rstbx/diffraction/fastbragg/tst_utils_clustering.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg copying /<>/.pybuild/cpython3_3.12/build/rstbx/diffraction/fastbragg/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg copying /<>/.pybuild/cpython3_3.12/build/rstbx/diffraction/fastbragg/tst_bragg_minimal.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg copying /<>/.pybuild/cpython3_3.12/build/rstbx/diffraction/tst_predict.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction copying /<>/.pybuild/cpython3_3.12/build/rstbx/diffraction/tst_partial_derivatives.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction copying /<>/.pybuild/cpython3_3.12/build/rstbx/diffraction/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction copying /<>/.pybuild/cpython3_3.12/build/rstbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx copying /<>/.pybuild/cpython3_3.12/build/rstbx/simulation/constants.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation copying /<>/.pybuild/cpython3_3.12/build/rstbx/simulation/sim_utils.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation copying /<>/.pybuild/cpython3_3.12/build/rstbx/simulation/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation copying /<>/.pybuild/cpython3_3.12/build/rstbx/simulation/sim_pdf.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation copying /<>/.pybuild/cpython3_3.12/build/rstbx/simulation/tst_xfel1_simple.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation copying /<>/.pybuild/cpython3_3.12/build/rstbx/symmetry/subgroup.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry copying /<>/.pybuild/cpython3_3.12/build/rstbx/symmetry/constraints/g_gradients.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints copying /<>/.pybuild/cpython3_3.12/build/rstbx/symmetry/constraints/parameter_reduction.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints copying /<>/.pybuild/cpython3_3.12/build/rstbx/symmetry/constraints/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints copying /<>/.pybuild/cpython3_3.12/build/rstbx/symmetry/sgtbx_adaptor.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry copying /<>/.pybuild/cpython3_3.12/build/rstbx/symmetry/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry copying /<>/.pybuild/cpython3_3.12/build/serialtbx/mono_simulation/max_like.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation copying /<>/.pybuild/cpython3_3.12/build/serialtbx/mono_simulation/util.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation copying /<>/.pybuild/cpython3_3.12/build/serialtbx/mono_simulation/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation copying /<>/.pybuild/cpython3_3.12/build/serialtbx/detector/jungfrau.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector copying /<>/.pybuild/cpython3_3.12/build/serialtbx/detector/rayonix.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector copying /<>/.pybuild/cpython3_3.12/build/serialtbx/detector/xtc.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector copying /<>/.pybuild/cpython3_3.12/build/serialtbx/detector/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector copying /<>/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology/metrology.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology copying /<>/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology/generic_detector.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology copying /<>/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology copying /<>/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology/cspad_detector.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology copying /<>/.pybuild/cpython3_3.12/build/serialtbx/detector/cspad.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector copying /<>/.pybuild/cpython3_3.12/build/serialtbx/util/time.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util copying /<>/.pybuild/cpython3_3.12/build/serialtbx/util/construct_frame.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util copying /<>/.pybuild/cpython3_3.12/build/serialtbx/util/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util copying /<>/.pybuild/cpython3_3.12/build/serialtbx/util/energy_scan_notch_finder.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util copying /<>/.pybuild/cpython3_3.12/build/serialtbx/__init__.py -> /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx copying /<>/.pybuild/cpython3_3.12/build/cctbx_eltbx_fp_fdp_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/rstbx_bpcx_detector_model_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages copying /<>/.pybuild/cpython3_3.12/build/cctbx_miller_ext.so -> /<>/debian/tmp/usr/lib/python3.12/dist-packages byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/structure_factors/direct/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/structure_factors/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/stl/map.py to map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/stl/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/conftest.py to conftest.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests/tst_ab_initio_ext.py to tst_ab_initio_ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests/tst_charge_flipping.py to tst_charge_flipping.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/charge_flipping.py to charge_flipping.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression/tst_commandline_refine.py to tst_commandline_refine.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression/tst_commandline_anomrefine.py to tst_commandline_anomrefine.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression/test_data/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/absolute_structure/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/development.py to development.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/source_generators/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/least_squares.py to least_squares.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical/all.py to all.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical/hydrogens.py to hydrogens.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/rigid.py to rigid.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/all.py to all.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/tst_reparametrisation.py to tst_reparametrisation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/test_same_group.py to test_same_group.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/tst_lbfgs.py to tst_lbfgs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/test_rigid.py to test_rigid.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/test_occupancies.py to test_occupancies.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/tst_constrained_structure.py to tst_constrained_structure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/test_disorder.py to test_disorder.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/test_direction.py to test_direction.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/site.py to site.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/adp.py to adp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/fpfdp.py to fpfdp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/occupancy.py to occupancy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/weighting_schemes.py to weighting_schemes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints/origin_fixing_restraints.py to origin_fixing_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints/adp_restraints.py to adp_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/masks/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/refine.py to refine.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/absolute_structure.py to absolute_structure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/masks.py to masks.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/benchmark_refinement.py to benchmark_refinement.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/anom_refine.py to anom_refine.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/preset_buttons.py to preset_buttons.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/webbrowser_messenger_py3.py to webbrowser_messenger_py3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/HKLviewer.py to HKLviewer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/cmdlineframes.py to cmdlineframes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/jsview_3d.py to jsview_3d.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/default_user_preset_buttons.py to default_user_preset_buttons.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/helpers.py to helpers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/xtriage_runner.py to xtriage_runner.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/xtricorder_runner.py to xtricorder_runner.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/webbrowser_messenger_py2.py to webbrowser_messenger_py2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/qt.py to qt.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/hklview_frame.py to hklview_frame.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/qt_chromium_check.py to qt_chromium_check.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/display2.py to display2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/hklviewer_gui.py to hklviewer_gui.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/chimeraX_wheel_src/tool.py to tool.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/chimeraX_wheel_src/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_websocket.py to tst_websocket.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py to tst_HKLviewerQtGuiSliceK-9.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tests_HKLviewer.py to tests_HKLviewer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py to tst_HKLviewerQtGuiBinFSigF.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_hklinfo.py to tst_hklinfo.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py to tst_HKLviewerOSbrowserBinFSigF.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py to tst_HKLviewerOSbrowserSliceK-9.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/programs/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/programs/HKLinfo.py to HKLinfo.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview/view_3d.py to view_3d.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview/view_2d.py to view_2d.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview/comparison.py to comparison.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview/frames.py to frames.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/hklview.py to hklview.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/HKLviewer.py to HKLviewer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/model_viewer.py to model_viewer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/visualize_r_factors.py to visualize_r_factors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/make_install_HKLviewer_ChimeraX.py to make_install_HKLviewer_ChimeraX.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/multiplicity_viewer.py to multiplicity_viewer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/qttbx.view_structure.py to qttbx.view_structure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/compare_datasets.py to compare_datasets.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/HKLinfo.py to HKLinfo.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx/xray_structure_viewer.py to xray_structure_viewer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx/map_viewer.py to map_viewer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/run_tests.py to run_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_18_doc_programming_tips_2.py to tst_18_doc_programming_tips_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_py_from_html.py to tst_py_from_html.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py to tst_6_doc_hlo_model_map_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_10_doc_programming_tips_1.py to tst_10_doc_programming_tips_1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_19_doc_programming_tips_3.py to tst_19_doc_programming_tips_3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_13_script_ideal_ss.py to tst_13_script_ideal_ss.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_14_script_lbfgs_no_curvature.py to tst_14_script_lbfgs_no_curvature.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_2_doc_hlo_intro.py to tst_2_doc_hlo_intro.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_12_script_compare_ss.py to tst_12_script_compare_ss.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_16_script_lbfgs_with_curvature.py to tst_16_script_lbfgs_with_curvature.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_4_doc_hlo_data_manager.py to tst_4_doc_hlo_data_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_1_template.py to tst_1_template.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_5_doc_hlo_map_manager.py to tst_5_doc_hlo_map_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_3_doc_hlo_model_manager.py to tst_3_doc_hlo_model_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_8_doc_maps_intro.py to tst_8_doc_maps_intro.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_11_script_1.py to tst_11_script_1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/exercise.py to exercise.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_17_script_rfactors.py to tst_17_script_rfactors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_15_doc_models_hierarchy.py to tst_15_doc_models_hierarchy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_7_doc_low_flex_advanced.py to tst_7_doc_low_flex_advanced.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_9_doc_maps_boxing.py to tst_9_doc_maps_boxing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/command_line/extract_script_from_html_cctbx_doc.py to extract_script_from_html_cctbx_doc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/copy_files.py to copy_files.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/command_line/dump.py to dump.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/exercise_compression.py to exercise_compression.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fast_linalg/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/small_cell.py to small_cell.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/powder_util.py to powder_util.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/small_cell_index.py to small_cell_index.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/xfel_small_cell_process.py to xfel_small_cell_process.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/cake_plot.py to cake_plot.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/cake_plot_prep.py to cake_plot_prep.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/candidate_cells.py to candidate_cells.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/small_cell_process.py to small_cell_process.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/powder_from_spots.py to powder_from_spots.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/solve_orientation.py to solve_orientation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/write_orientation_arrows.py to write_orientation_arrows.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation/mono_treatment.py to mono_treatment.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation/max_like_pos_neg.py to max_like_pos_neg.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_calib.py to mpi_fxs_calib.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/pnccd_tbx.py to pnccd_tbx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/fxs.py to fxs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/pnccd_hit.py to pnccd_hit.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_index.py to mpi_fxs_index.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_mask.py to mpi_fxs_mask.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_c2.py to mpi_fxs_c2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_bg.py to mpi_fxs_bg.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_launch.py to mpi_fxs_launch.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/phil_patch.py to phil_patch.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/run_stats_plotter.py to run_stats_plotter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/xfel_gui_plotter.py to xfel_gui_plotter.cpython-312.pyc /usr/lib/python3.12/dist-packages/xfel/ui/components/xfel_gui_plotter.py:393: SyntaxWarning: invalid escape sequence '\A' /usr/lib/python3.12/dist-packages/xfel/ui/components/xfel_gui_plotter.py:395: SyntaxWarning: invalid escape sequence '\A' /usr/lib/python3.12/dist-packages/xfel/ui/components/xfel_gui_plotter.py:397: SyntaxWarning: invalid escape sequence '\A' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/spotfinder_plotter.py to spotfinder_plotter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/submission_tracker.py to submission_tracker.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/spotfinder_scraper.py to spotfinder_scraper.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/xfel_gui_controls.py to xfel_gui_controls.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/timeit.py to timeit.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/xfel_gui_init.py to xfel_gui_init.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/xfel_gui_dialogs.py to xfel_gui_dialogs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/tooltips.py to tooltips.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_run_stats_in_gui.py to plot_run_stats_in_gui.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/ui_server.py to ui_server.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_reflection_stats.py to plot_reflection_stats.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_run_stats.py to plot_run_stats.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_run_stats_from_experiments.py to plot_run_stats_from_experiments.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_isoform_cloud.py to plot_isoform_cloud.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/print_run_stats.py to print_run_stats.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_uc_cloud.py to plot_uc_cloud.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_uc_cloud_from_experiments.py to plot_uc_cloud_from_experiments.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/xfel_gui_launch.py to xfel_gui_launch.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/get_hit_timestamps.py to get_hit_timestamps.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_spotfinder_stats_in_gui.py to plot_spotfinder_stats_in_gui.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/experiment.py to experiment.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/trial.py to trial.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/tag.py to tag.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/frame_logging.py to frame_logging.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/run.py to run.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/job.py to job.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/merging_log_scraper.py to merging_log_scraper.cpython-312.pyc /usr/lib/python3.12/dist-packages/xfel/ui/db/merging_log_scraper.py:106: SyntaxWarning: invalid escape sequence '\A' /usr/lib/python3.12/dist-packages/xfel/ui/db/merging_log_scraper.py:189: SyntaxWarning: invalid escape sequence '\A' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/task.py to task.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/dxtbx_db.py to dxtbx_db.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/dataset.py to dataset.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/rungroup.py to rungroup.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/cfgs/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/cfgs/shifter_templates.py to shifter_templates.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/stats.py to stats.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/xfel_db.py to xfel_db.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector/metrology2phil.py to metrology2phil.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector/cspad_cbf_tbx.py to cspad_cbf_tbx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/correction_vector_plot.py to correction_vector_plot.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cxi_cc.py to cxi_cc.cpython-312.pyc /usr/lib/python3.12/dist-packages/xfel/cxi/cxi_cc.py:132: SyntaxWarning: invalid escape sequence '\d' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/postrefinement_factory.py to postrefinement_factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/integrate_image_api.py to integrate_image_api.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_hdf5.py to mod_hdf5.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_ledge.py to mod_ledge.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_dump.py to mod_dump.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_daq_status.py to mod_daq_status.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/average_tbx.py to average_tbx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/common_mode.py to common_mode.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_average.py to mod_average.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/parse_calib.py to parse_calib.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/pixel_histograms.py to pixel_histograms.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_illumination_filter.py to mod_illumination_filter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/histogram_finalise.py to histogram_finalise.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_radial_average.py to mod_radial_average.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_view.py to mod_view.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/display_calib.py to display_calib.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_event_code.py to mod_event_code.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/xes_histograms.py to xes_histograms.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_event_info.py to mod_event_info.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_filter.py to mod_filter.cpython-312.pyc /usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_filter.py:52: SyntaxWarning: invalid escape sequence '\d' /usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_filter.py:53: SyntaxWarning: invalid escape sequence '\d' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_xes.py to mod_xes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/xes_finalise.py to xes_finalise.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_image_dict.py to mod_image_dict.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_hitfind.py to mod_hitfind.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter.py to mod_spectrum_filter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/hitfinder_tbx.py to hitfinder_tbx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/cspad_tbx.py to cspad_tbx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/xes_faster_histograms.py to xes_faster_histograms.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_dump_bitmap.py to mod_dump_bitmap.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py to mod_spectrum_filter_v2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_param.py to mod_param.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py to mod_onecolor_spectrum_filter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/rayonix_tbx.py to rayonix_tbx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py to mod_spectrum_filter_remote_only.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_mar.py to mod_mar.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_pulnix_dump.py to mod_pulnix_dump.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/completeness_plot.py to completeness_plot.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering/test_cluster.py to test_cluster.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering/Cluster.py to Cluster.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering/SingleFrame.py to SingleFrame.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/trumpet_plot.py to trumpet_plot.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/spectra_filter.py to spectra_filter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/display_powder_arcs.py to display_powder_arcs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/util.py to util.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx/status_plot.py to status_plot.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx/wx_detectors.py to wx_detectors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx/trials_plot.py to trials_plot.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/display_spots.py to display_spots.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/strong_zulu.py to strong_zulu.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/postrefinement_legacy_rs.py to postrefinement_legacy_rs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/command_line/einsle.py to einsle.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/data_utils.py to data_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/merging_utils.py to merging_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/average_spots.py to average_spots.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/postrefinement_hybrid_rs.py to postrefinement_hybrid_rs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/postrefinement_updated_rs.py to postrefinement_updated_rs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/split_detector.py to split_detector.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/image_pickle_locator.py to image_pickle_locator.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/mp.py to mp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/dials_pickle_reader.py to dials_pickle_reader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/weather.py to weather.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/cctbx_xfel_installer.py to cctbx_xfel_installer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/drift.py to drift.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/dials_file_matcher.py to dials_file_matcher.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/show_spot_separation.py to show_spot_separation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/kapton_2019_correction_frame_frame_plugin.py to kapton_2019_correction_frame_frame_plugin.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/reflection_length.py to reflection_length.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel/agipd_cxigeom2nexus.py to agipd_cxigeom2nexus.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel/agipd_from_defs.py to agipd_from_defs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel/write_composite_image.py to write_composite_image.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel/read_geom.py to read_geom.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/simulate_partial_data.py to simulate_partial_data.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/cluster_groups.py to cluster_groups.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/api.py to api.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/cluster_unit_cell.py to cluster_unit_cell.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/cluster_intensity_statistics.py to cluster_intensity_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/cluster_per_frame_wilson.py to cluster_per_frame_wilson.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/cluster_42.py to cluster_42.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/cluster_visualise_orientations.py to cluster_visualise_orientations.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/cluster.py to cluster.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/singleframe.py to singleframe.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc/components.py to components.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc/parameter_optimizer.py to parameter_optimizer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc/multiproc_temp_parame_opt.py to multiproc_temp_parame_opt.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc/graph.py to graph.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/pal/jf4m_geom2nexus.py to jf4m_geom2nexus.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/pal/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos/fit_3_gaussian.py to fit_3_gaussian.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos/test_3_gaussian.py to test_3_gaussian.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api/exercise_api.py to exercise_api.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api/psana_cctbx.py to psana_cctbx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/refine.py to refine.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/absorption.py to absorption.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate/factory.py to factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate/integrate.py to integrate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input/file_lister.py to file_lister.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input/file_loader.py to file_loader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input/file_load_calculator.py to file_load_calculator.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input/factory.py to factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/output/factory.py to factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/output/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale/experiment_scaler.py to experiment_scaler.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale/factory.py to factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/worker.py to worker.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata/cell_listing.py to cell_listing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata/factory.py to factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/reflection_table_utils.py to reflection_table_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter/factory.py to factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter/reflection_filter.py to reflection_filter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter/experiment_filter.py to experiment_filter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils/memory_usage.py to memory_usage.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils/data_counter.py to data_counter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model/factory.py to factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model/crystal_model.py to crystal_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model/resolution_binner.py to resolution_binner.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/validation/application.py to application.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/validation/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group/group_reflections.py to group_reflections.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group/factory.py to factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/phil/phil.py to phil.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/phil/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine/postrefinement_rs.py to postrefinement_rs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine/factory.py to factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine/postrefinement_rs2.py to postrefinement_rs2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus/lunus.py to lunus.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus/factory.py to factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge/merger.py to merger.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge/factory.py to factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/mpi_helper.py to mpi_helper.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_sr.py to error_modifier_sr.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_ha14.py to error_modifier_ha14.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/factory.py to factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_ev11.py to error_modifier_ev11.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/mpi_logger.py to mpi_logger.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/compare_results.py to compare_results.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/cosym_tranch_align.py to cosym_tranch_align.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/reindex_cosym.py to reindex_cosym.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/factory.py to factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/token_passing_left_right.py to token_passing_left_right.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/reindex_to_abc.py to reindex_to_abc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/cosym.py to cosym.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/df_cosym.py to df_cosym.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/reindex_to_reference.py to reindex_to_reference.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/polarization.py to polarization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/aux_cosym.py to aux_cosym.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance/factory.py to factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance/load_balancer.py to load_balancer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/intensity_resolution_statistics.py to intensity_resolution_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py to intensity_resolution_statistics_cxi.cpython-312.pyc /usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py:350: SyntaxWarning: invalid escape sequence '\d' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/factory.py to factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/intensity_histogram.py to intensity_histogram.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/experiment_resolution_statistics.py to experiment_resolution_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/beam_statistics.py to beam_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/unit_cell_statistics.py to unit_cell_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/phil_validation.py to phil_validation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database/merging_database.py to merging_database.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database/merging_database_flex.py to merging_database_flex.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database/merging_database_fs.py to merging_database_fs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database/merging_database_sqlite3.py to merging_database_sqlite3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/general_fcalc.py to general_fcalc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/model/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/postrefine/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/error_modeler_base.py to error_modeler_base.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/sdfac_propagate.py to sdfac_propagate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/errors_from_residuals.py to errors_from_residuals.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine.py to sdfac_refine.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine_levmar.py to sdfac_refine_levmar.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine_lbfgs.py to sdfac_refine_lbfgs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/reduced_chi_squared.py to reduced_chi_squared.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/sdfac_propagate_and_refine.py to sdfac_propagate_and_refine.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/statistics/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/predictions_to_edges.py to predictions_to_edges.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/graphs/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/tables/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line/merge.py to merge.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line/mpi_integrate.py to mpi_integrate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/simulate.py to simulate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/progress_utils.py to progress_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/isoform.py to isoform.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/split_pickles.py to split_pickles.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/progress_support.py to progress_support.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_detector_statistics.py to cspad_detector_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_pbs.py to cxi_pbs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/convert_gain_map.py to convert_gain_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_index.py to cxi_index.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/view_pixel_histograms.py to view_pixel_histograms.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_pickle2cbf.py to cxi_pickle2cbf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xpp_progress_detail.py to xpp_progress_detail.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_lsf.py to cxi_lsf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/fee_calibration.py to fee_calibration.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xpp_progress_bar.py to xpp_progress_bar.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/experiment_manager.py to experiment_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/make_mask.py to make_mask.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_merge.py to cxi_merge.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xtc_process.py to xtc_process.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/trumpet_plots.py to trumpet_plots.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xfel_process.py to xfel_process.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/find_highres_shots.py to find_highres_shots.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/fee_view.py to fee_view.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_slaccalib2cbfheader.py to cxi_slaccalib2cbfheader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/mpi_average.py to mpi_average.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cctbx_integration_pickle_viewer.py to cctbx_integration_pickle_viewer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/convert_gain_map_cbf.py to convert_gain_map_cbf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/metrology.py to metrology.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_cbfheader2slaccalib.py to cxi_cbfheader2slaccalib.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xtc_dump.py to xtc_dump.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/riso.py to riso.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_parameters.py to cxi_parameters.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/filter_experiments_by_rmsd.py to filter_experiments_by_rmsd.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/quadrants.py to quadrants.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/histogram_finalise.py to histogram_finalise.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xpp_isoform.py to xpp_isoform.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/smooth_spectrum.py to smooth_spectrum.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/print_pickle.py to print_pickle.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/or_mask.py to or_mask.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_display_metrology.py to cxi_display_metrology.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_stream_to_pickle.py to cxi_stream_to_pickle.cpython-312.pyc /usr/lib/python3.12/dist-packages/xfel/command_line/cxi_stream_to_pickle.py:23: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/xfel/command_line/cxi_stream_to_pickle.py:24: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/xfel/command_line/cxi_stream_to_pickle.py:33: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/xfel/command_line/cxi_stream_to_pickle.py:41: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/xfel/command_line/cxi_stream_to_pickle.py:42: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/xfel/command_line/cxi_stream_to_pickle.py:45: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/xfel/command_line/cxi_stream_to_pickle.py:48: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/xfel/command_line/cxi_stream_to_pickle.py:51: SyntaxWarning: invalid escape sequence '\s' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/stills_merge.py to stills_merge.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_psana.py to cxi_psana.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_circular_gain_mask.py to cspad_circular_gain_mask.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/frame_extractor.py to frame_extractor.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xes_histograms.py to xes_histograms.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/weather.py to weather.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/get_next_trial_id.py to get_next_trial_id.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xpp_simulate.py to xpp_simulate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/plot_to_subpixel.py to plot_to_subpixel.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/drift.py to drift.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cbf_average.py to cbf_average.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/calc_gain_ratio.py to calc_gain_ratio.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/striping.py to striping.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/launch_fxs.py to launch_fxs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/FEE_average_plot.py to FEE_average_plot.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xes_finalise.py to xes_finalise.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_cspad_pinwheel.py to cxi_cspad_pinwheel.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/experiment_residuals.py to experiment_residuals.cpython-312.pyc /usr/lib/python3.12/dist-packages/xfel/command_line/experiment_residuals.py:203: SyntaxWarning: invalid escape sequence '\D' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_xmerge.py to cxi_xmerge.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/detector_residuals.py to detector_residuals.cpython-312.pyc /usr/lib/python3.12/dist-packages/xfel/command_line/detector_residuals.py:1124: SyntaxWarning: invalid escape sequence '\D' /usr/lib/python3.12/dist-packages/xfel/command_line/detector_residuals.py:1126: SyntaxWarning: invalid escape sequence '\D' /usr/lib/python3.12/dist-packages/xfel/command_line/detector_residuals.py:1266: SyntaxWarning: invalid escape sequence '\A' /usr/lib/python3.12/dist-packages/xfel/command_line/detector_residuals.py:1267: SyntaxWarning: invalid escape sequence '\c' /usr/lib/python3.12/dist-packages/xfel/command_line/detector_residuals.py:1268: SyntaxWarning: invalid escape sequence '\A' /usr/lib/python3.12/dist-packages/xfel/command_line/detector_residuals.py:1294: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/xfel/command_line/detector_residuals.py:1295: SyntaxWarning: invalid escape sequence '\A' /usr/lib/python3.12/dist-packages/xfel/command_line/detector_residuals.py:1296: SyntaxWarning: invalid escape sequence '\s' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/show_spot_separation.py to show_spot_separation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/h5_average.py to h5_average.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/overlay_spectra.py to overlay_spectra.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/runs_sentinel.py to runs_sentinel.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/experiment_json_to_cbf_def.py to experiment_json_to_cbf_def.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_generate_circular_gain_mask.py to cxi_generate_circular_gain_mask.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_detector_congruence.py to cspad_detector_congruence.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_cbf_metrology.py to cspad_cbf_metrology.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/brehm_diederichs.py to brehm_diederichs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_detector_format_versions.py to cxi_detector_format_versions.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/upload_mtz.py to upload_mtz.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_xtc_process.py to cxi_xtc_process.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/trial_stats.py to trial_stats.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/monitor_trials.py to monitor_trials.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/jungfrau_metrics.py to jungfrau_metrics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/subtract_background.py to subtract_background.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/frame_unpickler.py to frame_unpickler.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/beamcenter.py to beamcenter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/list_db_metadata.py to list_db_metadata.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_plotcv.py to cxi_plotcv.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/monitor_detectors.py to monitor_detectors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_spots.py to cxi_spots.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_mpi_submit.py to cxi_mpi_submit.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_detector_congruence2.py to cspad_detector_congruence2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/make_mar_mask.py to make_mar_mask.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/jobs_sentinel.py to jobs_sentinel.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_apply_metrology.py to cxi_apply_metrology.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_detector_shifts.py to cspad_detector_shifts.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_view.py to cxi_view.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_optical2cbfheader.py to cxi_optical2cbfheader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_diff.py to cxi_diff.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/make_dials_mask.py to make_dials_mask.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/recompute_mosaicity.py to recompute_mosaicity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/auto_submit.py to auto_submit.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/radial_average.py to radial_average.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/quadrants_cbf.py to quadrants_cbf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/postrefine.py to postrefine.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_calibdir2cbfheader.py to cxi_calibdir2cbfheader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_pyana.py to cxi_pyana.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel/sync_jf16m_geometry.py to sync_jf16m_geometry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel/jf16m_cxigeom2nexus.py to jf16m_cxigeom2nexus.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/mark1.py to mark1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/mark0.py to mark0.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/flatfile.py to flatfile.cpython-312.pyc /usr/lib/python3.12/dist-packages/xfel/metrology/flatfile.py:1022: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/xfel/metrology/flatfile.py:1024: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/xfel/metrology/flatfile.py:1026: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/xfel/metrology/flatfile.py:1028: SyntaxWarning: invalid escape sequence '\s' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/mark3.py to mark3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/quadrant.py to quadrant.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/mark10.py to mark10.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/legacy_scale/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/panel_fitting.py to panel_fitting.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/tst_cout.py to tst_cout.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/tst_cout_compile.py to tst_cout_compile.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/run_tests.py to run_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/simple_compilation.py to simple_compilation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/tst_equivalence.py to tst_equivalence.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/cout.py to cout.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/tokenization.py to tokenization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/show_calls.py to show_calls.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/insert_write_at_start_of_each_procedure.py to insert_write_at_start_of_each_procedure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/cout.py to cout.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/split.py to split.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/read.py to read.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/fem_include_search_paths.py to fem_include_search_paths.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/tst_read.py to tst_read.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/intrinsics.py to intrinsics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/read.py to read.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fable/equivalence.py to equivalence.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/regular_grid_on_unit_sphere.py to regular_grid_on_unit_sphere.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/map.py to map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/tst_set.py to tst_set.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/tst_map.py to tst_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/vector.py to vector.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/tst_vector.py to tst_vector.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/set.py to set.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests/tst_normal_equations.py to tst_normal_equations.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests/test_problems.py to test_problems.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/normal_eqns_solving.py to normal_eqns_solving.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/normal_eqns.py to normal_eqns.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/glmtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/matrix/row_echelon.py to row_echelon.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/matrix/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/lbfgs_recipe.py to lbfgs_recipe.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/rigid_body_refinement_core.py to rigid_body_refinement_core.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/chebyshev_lsq_example.py to chebyshev_lsq_example.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/integrating_a_weighted_sinc_function.py to integrating_a_weighted_sinc_function.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/functions.py to functions.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/principal_axes_of_inertia.py to principal_axes_of_inertia.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/immoptibox_ports.py to immoptibox_ports.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/minimizer_comparisons.py to minimizer_comparisons.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/bevington/silver.py to silver.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/bevington/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/lbfgs_linear_least_squares_fit.py to lbfgs_linear_least_squares_fit.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/flex_array_loops.py to flex_array_loops.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/flex_grid.py to flex_grid.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/bootstrap.py to bootstrap.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/sparse/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_singular.py to tst_singular.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_joint_lib.py to tst_joint_lib.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_free_motion_hard.py to tst_free_motion_hard.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_molecules.py to tst_molecules.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/free_motion_reference_impl.py to free_motion_reference_impl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/wx_free_motion.py to wx_free_motion.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_featherstone.py to tst_featherstone.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/joint_lib.py to joint_lib.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/test_simulation.py to test_simulation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/wx_molecules.py to wx_molecules.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_spherical_refinement.py to tst_spherical_refinement.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/wx_joint_lib.py to wx_joint_lib.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/featherstone.py to featherstone.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/test_utils.py to test_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_free_motion.py to tst_free_motion.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/wx_tardy.py to wx_tardy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/tst_energy_plots.py to tst_energy_plots.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/tardy.py to tardy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/tst_tardy.py to tst_tardy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/joint_lib.py to joint_lib.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/body_lib.py to body_lib.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/spatial_lib.py to spatial_lib.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/featherstone.py to featherstone.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/tst_basic.py to tst_basic.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/make_bundles.py to make_bundles.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg/svd.py to svd.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg/ext.py to ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg/householder.py to householder.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg/eigensystem.py to eigensystem.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/fftpack.py to fftpack.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgsb.py to lbfgsb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/minimizers.py to minimizers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/test_cases_tardy_pdb.py to test_cases_tardy_pdb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/tst_tardy_tree.py to tst_tardy_tree.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/tst_tardy_tree_find_paths.py to tst_tardy_tree_find_paths.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/rigidity_matrix_symbolic.py to rigidity_matrix_symbolic.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/rigidity.py to rigidity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/tardy_tree.py to tardy_tree.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/tst_rigidity.py to tst_rigidity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/random/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/differential_evolution.py to differential_evolution.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/restraints.py to restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/genetic_algorithm_with_mp.py to genetic_algorithm_with_mp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/lbfgs_fem.py to lbfgs_fem.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_reductions.py to generate_reductions.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_operator_traits_builtin.py to generate_operator_traits_builtin.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/operator_functor_info.py to operator_functor_info.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_all.py to generate_all.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_algebras.py to generate_algebras.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_operator_functors.py to generate_operator_functors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_apply.py to generate_apply.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_std_imports.py to generate_std_imports.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/refinebase.py to refinebase.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/optional.py to optional.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/min_logging.py to min_logging.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/compulsory.py to compulsory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/minimizer.py to minimizer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/bounds.py to bounds.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/reparams.py to reparams.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/realsymmetricpseudoinverse.py to realsymmetricpseudoinverse.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/twisted_gaussian.py to twisted_gaussian.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/auxiliary.py to auxiliary.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/r3_utils.py to r3_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/cross_entropy.py to cross_entropy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_2d_zernike.py to tst_2d_zernike.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_multivariate_moments.py to tst_multivariate_moments.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/sphere_sphere_intersection.py to sphere_sphere_intersection.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_zernike_mom.py to tst_zernike_mom.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/zernike_align_fft.py to zernike_align_fft.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/incremental_SO3_sampling.py to incremental_SO3_sampling.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/besselk.py to besselk.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_undirected_graph.py to tst_undirected_graph.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/fliege_mayer_900_ylm.py to fliege_mayer_900_ylm.cpython-312.pyc /usr/lib/python3.12/dist-packages/scitbx/math/fliege_mayer_900_ylm.py:1: SyntaxWarning: invalid escape sequence '\i' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_bessel_zeros.py to tst_bessel_zeros.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/chebyshev_lsq_fit.py to chebyshev_lsq_fit.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/clustering.py to clustering.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/lefebvre.py to lefebvre.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/so3_lie_algebra.py to so3_lie_algebra.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/minimum_covering_ellipsoid.py to minimum_covering_ellipsoid.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/des_3_100_13.py to des_3_100_13.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_so3_lie_algebra.py to tst_so3_lie_algebra.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/periodogram.py to periodogram.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_r3_rotation.py to tst_r3_rotation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_gaussian.py to tst_gaussian.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_curve_fitting.py to tst_curve_fitting.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_resample.py to tst_resample.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_weighted_correlation.py to tst_weighted_correlation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_error_propagation_matrix_inverse.py to tst_error_propagation_matrix_inverse.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_fit_peak.py to tst_fit_peak.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_fit_quadratic_function.py to tst_fit_quadratic_function.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_uniform_rotation_matrix.py to tst_uniform_rotation_matrix.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_minimum_covering_ellipsoid.py to tst_minimum_covering_ellipsoid.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_cubic_equation.py to tst_cubic_equation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_halton.py to tst_halton.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_math.py to tst_math.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_euler_angles.py to tst_euler_angles.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_periodogram.py to tst_periodogram.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_gaussian_fit_1d_analytical.py to tst_gaussian_fit_1d_analytical.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_tetrahedron.py to tst_tetrahedron.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_exp_functions.py to tst_exp_functions.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_orthonormal_basis.py to tst_orthonormal_basis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_g_function.py to tst_g_function.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_bessel.py to tst_bessel.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_quadrature.py to tst_quadrature.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_angle_derivative.py to tst_angle_derivative.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_dmatrix.py to tst_dmatrix.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_similarity_indices.py to tst_similarity_indices.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_superpose.py to tst_superpose.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_clustering.py to tst_clustering.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_line_search.py to tst_line_search.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_gcd.py to tst_gcd.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/spe.py to spe.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/des_3_240_21.py to des_3_240_21.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/euler_angles.py to euler_angles.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/fliege_mayer_400.py to fliege_mayer_400.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/farey.py to farey.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/distributions.py to distributions.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/curve_fitting.py to curve_fitting.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/breakpoint.py to breakpoint.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/ext.py to ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/fliege_mayer_900.py to fliege_mayer_900.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_zernike.py to tst_zernike.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/multiple_superposition.py to multiple_superposition.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/sieve_of_eratosthenes.py to sieve_of_eratosthenes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/superpose.py to superpose.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/undirected_graph.py to undirected_graph.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/fit_quadratic_function.py to fit_quadratic_function.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/scale_curves.py to scale_curves.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/fit_peak.py to fit_peak.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/cubic_spline.py to cubic_spline.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/gumbel.py to gumbel.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/gaussian.py to gaussian.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/gaussian_fit.py to gaussian_fit.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/boost_python/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graphics_utils/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graphics_utils/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/suffixtree/single.py to single.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/suffixtree/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family/shared.py to shared.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family/flex.py to flex.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/tst_mpi_split_evaluator.py to tst_mpi_split_evaluator.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/tst_lbfgs_fem.py to tst_lbfgs_fem.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/tst_func_free_line_search.py to tst_func_free_line_search.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/tst_curvatures.py to tst_curvatures.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/golden_section_search.py to golden_section_search.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/direct_search_simulated_annealing.py to direct_search_simulated_annealing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/simplex.py to simplex.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/wigner/tst_wigner3j.py to tst_wigner3j.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/wigner/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/cubicle_neighbors.py to cubicle_neighbors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/iso_surface/tst_iso_surface.py to tst_iso_surface.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/iso_surface/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/minpack.py to minpack.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/signal_utils.py to signal_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/tst_random_transform.py to tst_random_transform.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/robust_statistics.py to robust_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/command_line.py to command_line.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/random_utils.py to random_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/tst_graph.py to tst_graph.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/misc.py to misc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/dicts.py to dicts.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/tst_robust.py to tst_robust.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/graph_tools.py to graph_tools.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/random_transform.py to random_transform.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/smoothing.py to smoothing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/boost_python/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stdlib/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/math_support/sphere_formulae.py to sphere_formulae.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/math_support/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/run_tests.py to run_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/adsc_client.py to adsc_client.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/spotfinder_server_read_file.py to spotfinder_server_read_file.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/mp_spotfinder_server_read_file.py to mp_spotfinder_server_read_file.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/pilatus_client.py to pilatus_client.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/specific_client_example.py to specific_client_example.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/multipart_encoder.py to multipart_encoder.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/general_client_example.py to general_client_example.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/spotfinder_server_client_push.py to spotfinder_server_client_push.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/bcsb_client_example.py to bcsb_client_example.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/apache_bcsb.py to apache_bcsb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/apache_utils.py to apache_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/apache.py to apache.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/mp_spotfinder_server_is_alive.py to mp_spotfinder_server_is_alive.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/thin_client.py to thin_client.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/apache_dials.py to apache_dials.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/dxtbx_toolbox/practical_heuristics.py to practical_heuristics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/dxtbx_toolbox/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/core_toolbox/close_spots_detail.py to close_spots_detail.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/core_toolbox/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/array_family/flex.py to flex.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/mp_spotfinder_server_read_file.py to mp_spotfinder_server_read_file.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/sweep_strength.py to sweep_strength.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/image_viewer.py to image_viewer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/signal_strength.py to signal_strength.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/find_active_area.py to find_active_area.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/thin_client.py to thin_client.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction/geometry.py to geometry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction/imagefiles.py to imagefiles.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel/correction_vector_plot.py to correction_vector_plot.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel/cxi_run3.py to cxi_run3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel/cxi_phil.py to cxi_phil.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/wrappers.py to wrappers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/practical_heuristics.py to practical_heuristics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/image_viewer.py to image_viewer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx/ice2.py to ice2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx/method2_resolution.py to method2_resolution.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx/ice_nztt.py to ice_nztt.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx/spotreporter.py to spotreporter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/stats_distl.py to stats_distl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/signal_strength.py to signal_strength.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/exception.py to exception.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx/copy_files.py to copy_files.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cma_es/run_tests.py to run_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cma_es/cma_es_interface.py to cma_es_interface.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cma_es/tst_cma_es.py to tst_cma_es.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cma_es/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx/self_match.py to self_match.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx/sample.py to sample.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/source_generators/generate_all.py to generate_all.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/source_generators/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu/tst_gpu_multisource_background.py to tst_gpu_multisource_background.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu/tst_shoeboxes.py to tst_shoeboxes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu/tst_exafel_api.py to tst_exafel_api.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling/forward_models.py to forward_models.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling/predictions.py to predictions.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling/FormatHDF5AttributeGeometry.py to FormatHDF5AttributeGeometry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_input.py to nanoBragg_input.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_gui_dialogs.py to nanoBragg_gui_dialogs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_mosaic.py to tst_nanoBragg_mosaic.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_multisource_background.py to tst_multisource_background.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_cbf_write.py to tst_nanoBragg_cbf_write.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_beam.py to nanoBragg_beam.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_gui_frames.py to nanoBragg_gui_frames.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_minimal.py to tst_nanoBragg_minimal.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_multipanel.py to tst_nanoBragg_multipanel.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_threads.py to nanoBragg_threads.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_anisotropic_mosaicity.py to tst_anisotropic_mosaicity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_crystal.py to nanoBragg_crystal.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_gui_init.py to nanoBragg_gui_init.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_gaussian_mosaicity.py to tst_gaussian_mosaicity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/anisotropic_mosaicity.py to anisotropic_mosaicity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_gaussian_mosaicity2.py to tst_gaussian_mosaicity2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_pilatus.py to tst_nanoBragg_pilatus.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_gauss_argchk.py to tst_gauss_argchk.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_basic.py to tst_nanoBragg_basic.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/sim_data.py to sim_data.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/pixel/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/parameter_errors.py to parameter_errors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/stage_two_utils.py to stage_two_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/base_refiner.py to base_refiner.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/manager.py to manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/monoclinic.py to monoclinic.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/tetragonal.py to tetragonal.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/orthorhombic.py to orthorhombic.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/hexagonal.py to hexagonal.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/stage_two_refiner.py to stage_two_refiner.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/parameters.py to parameters.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/hopper_ensemble_utils.py to hopper_ensemble_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/phil.py to phil.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/hopper_io.py to hopper_io.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/psf.py to psf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/hopper_utils.py to hopper_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/ensemble_refine_launcher.py to ensemble_refine_launcher.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/prep_stage2_input.py to prep_stage2_input.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/device.py to device.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/attr_list.py to attr_list.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/mpi_logger.py to mpi_logger.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/kokkos/tst_kokkos_lib.py to tst_kokkos_lib.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/kokkos/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/browser.py to browser.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/process_control.py to process_control.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/layout.py to layout.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/polygon.py to polygon.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/ensemble_validation.py to ensemble_validation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/mtz_dump.py to mtz_dump.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/heavy_atoms.py to heavy_atoms.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/xtriage.py to xtriage.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/errors.py to errors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/app.py to app.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports/blast.py to blast.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports/pdb_symmetry.py to pdb_symmetry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/wx4_compatibility.py to wx4_compatibility.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/checklistctrl.py to checklistctrl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/info_panels.py to info_panels.cpython-312.pyc /usr/lib/python3.12/dist-packages/wxtbx/info_panels.py:208: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/wxtbx/info_panels.py:418: SyntaxWarning: invalid escape sequence '\s' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/custom_restraints.py to custom_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/metallicbutton.py to metallicbutton.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/tables.py to tables.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/symmetry_dialog.py to symmetry_dialog.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/listeditor.py to listeditor.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/sequence_view.py to sequence_view.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/misc_dialogs.py to misc_dialogs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/icons.py to icons.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots/molprobity.py to molprobity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots/emringer.py to emringer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/qstat_view.py to qstat_view.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/loggraph.py to loggraph.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/xtriage.py to xtriage.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/inspect_r_free_flags.py to inspect_r_free_flags.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/anomalous_differences_histogram.py to anomalous_differences_histogram.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/pdb_statistics.py to pdb_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/wxpython.py to wxpython.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/plot_anomalous_scattering.py to plot_anomalous_scattering.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/show_file_info.py to show_file_info.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/b_plot.py to b_plot.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/plan_sad_experiment.py to plan_sad_experiment.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/pdb_editor.py to pdb_editor.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/anomalous_scattering.py to anomalous_scattering.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/windows.py to windows.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/b_plot.py to b_plot.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/segmentedctrl.py to segmentedctrl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/adp_statistics.py to adp_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/monitor.py to monitor.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/intctrl.py to intctrl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/choice_multi.py to choice_multi.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/ints.py to ints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/numbers.py to numbers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/strctrl.py to strctrl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/tree.py to tree.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/symop.py to symop.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/choice.py to choice.cpython-312.pyc /usr/lib/python3.12/dist-packages/wxtbx/phil_controls/choice.py:18: SyntaxWarning: invalid escape sequence '\*' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/text_base.py to text_base.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/space_group.py to space_group.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/array_label.py to array_label.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/path.py to path.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/boolctrl.py to boolctrl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/floatctrl.py to floatctrl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/misc_ctrls.py to misc_ctrls.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/simple_dialogs.py to simple_dialogs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/tribool.py to tribool.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/strings.py to strings.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/floats.py to floats.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/unit_cell.py to unit_cell.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/path_dialogs.py to path_dialogs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/polygon_db_viewer.py to polygon_db_viewer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/bitmaps.py to bitmaps.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/pdb_editor.py to pdb_editor.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/hybrid_times.py to hybrid_times.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/graph_structure_comparison.py to graph_structure_comparison.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/maximum_clique.py to maximum_clique.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/utility.py to utility.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/connected_component_algorithm.py to connected_component_algorithm.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/metric.py to metric.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/breadth_first_search.py to breadth_first_search.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/minimum_cut_enumerate.py to minimum_cut_enumerate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/min_cut_max_flow.py to min_cut_max_flow.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/clustering_algorithm.py to clustering_algorithm.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/optional.py to optional.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/tuple.py to tuple.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/std_pair.py to std_pair.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/rational.py to rational.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/python.py to python.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/double_overflow.py to double_overflow.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/show_platform_info.py to show_platform_info.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/inexact.py to inexact.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py to nested_cpp_loops_with_check_signals.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/lcm.py to lcm.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/divide_by_zero.py to divide_by_zero.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/show_environ_usage.py to show_environ_usage.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/int_overflow.py to int_overflow.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/gcd.py to gcd.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/segmentation_fault.py to segmentation_fault.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/multipolar.py to multipolar.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/math_module.py to math_module.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/dmtbx.py to dmtbx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/view_fft_map.py to view_fft_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/space_subgroups.py to space_subgroups.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/neutron_structure_factors.py to neutron_structure_factors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/unit_cell_refinement.py to unit_cell_refinement.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_phase_o_phrenia.py to tst_phase_o_phrenia.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_exp_i_alpha_derivatives.py to tst_exp_i_alpha_derivatives.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/all_axes.py to all_axes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/ccp4_map.py to ccp4_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/miller_transform.py to miller_transform.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/fft_map_electron_density_around_atom.py to fft_map_electron_density_around_atom.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/lebedev_2005_perturbation.py to lebedev_2005_perturbation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/reduced_cell_two_folds.py to reduced_cell_two_folds.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/exp_i_alpha_derivatives.py to exp_i_alpha_derivatives.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/cr2o3_primitive_cell.py to cr2o3_primitive_cell.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_structure_factor_derivatives_2.py to tst_structure_factor_derivatives_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py to sites_least_squares_derivatives.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus/sites_derivatives.py to sites_derivatives.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus/site_derivatives.py to site_derivatives.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus/u_star_derivatives.py to u_star_derivatives.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/g_exp_i_alpha_derivatives.py to g_exp_i_alpha_derivatives.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_space_subgroups.py to tst_space_subgroups.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/analyze_adp.py to analyze_adp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_derivatives_2.py to structure_factor_derivatives_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_derivatives_3.py to structure_factor_derivatives_3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/maximum_subgroups.py to maximum_subgroups.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/f_model_example.py to f_model_example.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/steve_collins.py to steve_collins.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/change_hand_p31.py to change_hand_p31.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/list_non_principal_continuous_shifts.py to list_non_principal_continuous_shifts.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/symops_530.py to symops_530.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_structure_factor_derivatives_4.py to tst_structure_factor_derivatives_4.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/le_page_1982_vs_lebedev_2005.py to le_page_1982_vs_lebedev_2005.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/space_group_matrices.py to space_group_matrices.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/map_skewness.py to map_skewness.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/test_levenberg_sparse.py to test_levenberg_sparse.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa/per_lattice_postrefinement.py to per_lattice_postrefinement.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa/scale.py to scale.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa/join.py to join.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/sigma_correction.py to sigma_correction.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/task4.py to task4.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/tst_permutations.py to tst_permutations.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/data_subset.py to data_subset.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/test1.py to test1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/show_results.py to show_results.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/data_utilities.py to data_utilities.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/test_cc_half.py to test_cc_half.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_derivatives.py to structure_factor_derivatives.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/sub_group_graph.py to sub_group_graph.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/trigonal_r_vs_tetragonal_i.py to trigonal_r_vs_tetragonal_i.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/miller_common_sets.py to miller_common_sets.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_g_exp_i_alpha_derivatives.py to tst_g_exp_i_alpha_derivatives.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/find_distances_using_cpp_objects.py to find_distances_using_cpp_objects.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/find_sys_abs_equiv_space_groups.py to find_sys_abs_equiv_space_groups.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/site_symmetry_constraints.py to site_symmetry_constraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/random_puckers.py to random_puckers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/unit_cell_minimizers.py to unit_cell_minimizers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_structure_factor_derivatives_3.py to tst_structure_factor_derivatives_3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/hirshfeld_test.py to hirshfeld_test.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/location_part.py to location_part.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/g_exp_i_partial_derivatives.py to g_exp_i_partial_derivatives.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/random_f_calc.py to random_f_calc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/cr2o3_consistency_checks.py to cr2o3_consistency_checks.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_derivatives_4.py to structure_factor_derivatives_4.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/adp_symmetry_constraints.py to adp_symmetry_constraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/convert_ccp4_symop_lib.py to convert_ccp4_symop_lib.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_structure_factor_derivatives.py to tst_structure_factor_derivatives.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/site_symmetry_table.py to site_symmetry_table.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/quartz_structure.py to quartz_structure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/getting_started.py to getting_started.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/phase_o_phrenia.py to phase_o_phrenia.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/covariance/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/french_wilson.py to french_wilson.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/real_space_refinement_simple.py to real_space_refinement_simple.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/auto_sharpen.py to auto_sharpen.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/segment_and_split_map.py to segment_and_split_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_interpolation_2.py to tst_interpolation_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/box.py to box.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/refine_sharpening.py to refine_sharpening.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/mem.py to mem.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_atom_curves.py to tst_atom_curves.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_bcr.py to tst_bcr.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/resolution_from_map_and_model.py to resolution_from_map_and_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/prepare_map_for_docking.py to prepare_map_for_docking.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/minimization.py to minimization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_resolution_from_map_and_model.py to tst_resolution_from_map_and_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/mask.py to mask.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_atom_radius_as_central_peak_width.py to tst_atom_radius_as_central_peak_width.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_interpolation.py to tst_interpolation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/refine_scales_errors.py to refine_scales_errors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_loft.py to tst_loft.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_target_and_gradients.py to tst_target_and_gradients.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/map_symmetry.py to map_symmetry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_ccp.py to tst_ccp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_get_percentile_cutoffs.py to tst_get_percentile_cutoffs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_asymmetric_map.py to tst_asymmetric_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/bcr/bcr.py to bcr.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/bcr/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_real_space_refinement_simple.py to tst_real_space_refinement_simple.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_peak_volume_estimate.py to tst_peak_volume_estimate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_map_peak_3d_as_2d.py to tst_map_peak_3d_as_2d.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_mask.py to tst_mask.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/neutron/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/from_scatterers.py to from_scatterers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/manager.py to manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/global_counters.py to global_counters.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/gradients_fft.py to gradients_fft.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/from_scatterers_fft.py to from_scatterers_fft.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/from_scatterers_direct.py to from_scatterers_direct.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/misc.py to misc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/gradients_base.py to gradients_base.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/from_scatterers_direct_parallel.py to from_scatterers_direct_parallel.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/gradient_flags.py to gradient_flags.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/gradients_direct.py to gradients_direct.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/gradients.py to gradients.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/observations/tst_observations.py to tst_observations.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/observations/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/scatterer.py to scatterer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/minimization.py to minimization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/target_functors.py to target_functors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/weighting_schemes.py to weighting_schemes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets/tst_shelxl_wght_ls.py to tst_shelxl_wght_ls.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets/tst_r1.py to tst_r1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets/r1.py to r1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/ext.py to ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/observation_types.py to observation_types.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure.py to structure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/fmt_utils.py to fmt_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/debug_utils.py to debug_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/tst_cns_epsilon.py to tst_cns_epsilon.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/structure_factor_utils.py to structure_factor_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/approx_amplitude_vs_resolution.py to approx_amplitude_vs_resolution.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/space_group_option_parser.py to space_group_option_parser.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/direct_or_fft.py to direct_or_fft.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/make_settings.py to make_settings.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/random_structure.py to random_structure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/github.py to github.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/electron_density_sampling.py to electron_density_sampling.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/run_shelx76.py to run_shelx76.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/tst_cns_hl.py to tst_cns_hl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/create_models_or_maps.py to create_models_or_maps.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/make_cns_input.py to make_cns_input.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/cns_density_modification.py to cns_density_modification.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/run_shelx.py to run_shelx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/macro_mol/rotation_parameters.py to rotation_parameters.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/macro_mol/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/reindex.py to reindex.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/tst_super_cell.py to tst_super_cell.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/tst_distance_based_connectivity.py to tst_distance_based_connectivity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/burzlaff_zimmermann_dewolff.py to burzlaff_zimmermann_dewolff.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/super_cell.py to super_cell.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/find_best_cell.py to find_best_cell.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/distance_based_connectivity.py to distance_based_connectivity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/direct_space_asu.py to direct_space_asu.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/close_packing.py to close_packing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/coordination_sequences.py to coordination_sequences.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_geometry_restraints.py to tst_geometry_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_geometry_restraints_lbfgs.py to tst_geometry_restraints_lbfgs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_grouped_data.py to tst_grouped_data.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_diffuse.py to tst_diffuse.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller.py to tst_miller.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_fft_map.py to tst_miller_fft_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_reciprocal_space_asu.py to tst_reciprocal_space_asu.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_show_cosets.py to tst_show_cosets.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_pointgroup_tools.py to tst_pointgroup_tools.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_r_free_utils.py to tst_r_free_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_loc_res.py to tst_loc_res.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_fast_nv1995.py to tst_fast_nv1995.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_maptbx_mask.py to tst_maptbx_mask.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_pair_asu_table.py to tst_pair_asu_table.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_amplitude_normalisation.py to tst_amplitude_normalisation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray.py to tst_xray.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_change_basis.py to tst_change_basis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_space_group_type_tidy_cb_op_t.py to tst_space_group_type_tidy_cb_op_t.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_wilson_plot.py to tst_wilson_plot.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx.py to tst_sgtbx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_triplet_generator.py to tst_triplet_generator.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_fcalc_fft_stability.py to tst_fcalc_fft_stability.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_mem_2.py to tst_mem_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_adp_constraints.py to tst_adp_constraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_find_best_cell.py to tst_find_best_cell.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_refine_xray_curvs.py to tst_refine_xray_curvs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_expand_to_p1.py to tst_expand_to_p1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_lookup_utils.py to tst_miller_lookup_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_coordination_sequences.py to tst_coordination_sequences.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_data_manipulation.py to tst_miller_data_manipulation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_reflection_statistics.py to tst_reflection_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_crystal.py to tst_crystal.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_statistics_graphs.py to tst_statistics_graphs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_web_change_basis.py to tst_web_change_basis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_lattice_symmetry.py to tst_sgtbx_lattice_symmetry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_harker.py to tst_sgtbx_harker.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_map_is_periodic.py to tst_map_is_periodic.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sf_low_res_accuracy.py to tst_sf_low_res_accuracy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_grm_modifications.py to tst_grm_modifications.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_french_wilson.py to tst_french_wilson.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_twin_target.py to tst_twin_target.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_denominators.py to tst_sgtbx_denominators.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_map_weights_for_symmetry_summation.py to tst_map_weights_for_symmetry_summation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_direct_scaling.py to tst_direct_scaling.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_wavelength_units.py to tst_wavelength_units.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_connectivity.py to tst_connectivity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_grm_pickling.py to tst_grm_pickling.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_tidy_pickling.py to tst_sgtbx_tidy_pickling.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_crystal_asu_clusters.py to tst_crystal_asu_clusters.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_adp_aniso_restraints.py to tst_adp_aniso_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray_fast_gradients.py to tst_xray_fast_gradients.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_krivy_gruber.py to tst_krivy_gruber.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_double_step_filtration.py to tst_miller_double_step_filtration.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_geometry_restraints_2.py to tst_geometry_restraints_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_maptbx_box.py to tst_maptbx_box.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray_derivatives.py to tst_xray_derivatives.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_adp_constraints_cartesian.py to tst_adp_constraints_cartesian.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_subgroups.py to tst_sgtbx_subgroups.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_f_model.py to tst_f_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_prepare_map_for_docking.py to tst_prepare_map_for_docking.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray_minimization.py to tst_xray_minimization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_direct_space_asu.py to tst_direct_space_asu.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_connectivity_allsym.py to tst_connectivity_allsym.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_weighting_schemes.py to tst_weighting_schemes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_emma.py to tst_emma.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray_minimization_failure.py to tst_xray_minimization_failure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_site_constraints.py to tst_sgtbx_site_constraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_fourier_transform_real_part_at_x.py to tst_fourier_transform_real_part_at_x.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_create_models_or_maps.py to tst_create_models_or_maps.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_statistics.py to tst_miller_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_merge_equivalents.py to tst_miller_merge_equivalents.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray_target_functors.py to tst_xray_target_functors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sphericity.py to tst_sphericity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_mem.py to tst_mem.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_crystal_close_packing.py to tst_crystal_close_packing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sampled_model_density.py to tst_sampled_model_density.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_itvb_2001_table_a1427_hall_symbols.py to tst_itvb_2001_table_a1427_hall_symbols.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_math_module.py to tst_math_module.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_special_op_simplifier.py to tst_sgtbx_special_op_simplifier.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_maptbx_structure_factors.py to tst_maptbx_structure_factors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/plane_groups.py to plane_groups.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/cosets.py to cosets.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/sys_abs_equiv.py to sys_abs_equiv.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/rational_matrices_point_groups.py to rational_matrices_point_groups.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/reticular_twin_laws.py to reticular_twin_laws.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto/tst_asu.py to tst_asu.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py to generate_cpp_asu_table.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/facet_analysis.py to facet_analysis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/check_redundancies.py to check_redundancies.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/short_cuts.py to short_cuts.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/cut_plane.py to cut_plane.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/reference_table.py to reference_table.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py to plane_group_reference_table.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/show_cosets.py to show_cosets.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/reticular_pg_tools.py to reticular_pg_tools.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/pointgroup_tools.py to pointgroup_tools.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/symbol_confidence.py to symbol_confidence.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/subgroups.py to subgroups.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/lattice_symmetry.py to lattice_symmetry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/literal_description.py to literal_description.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/sub_lattice_tools.py to sub_lattice_tools.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/harker.py to harker.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/bravais_types.py to bravais_types.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/icsd_radii.py to icsd_radii.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/tiny_pse.py to tiny_pse.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/neutron.py to neutron.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/formula.py to formula.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/sasaki.py to sasaki.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/fp_fdp.py to fp_fdp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/combine_fits.py to combine_fits.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/create_n_gaussian_raw_cpp.py to create_n_gaussian_raw_cpp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/format_gaussian_fits.py to format_gaussian_fits.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/rez_rez_grant.py to rez_rez_grant.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/itvc_approx.py to itvc_approx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/itvc_fits.py to itvc_fits.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/kissel_fits.py to kissel_fits.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/itvc_kissel.py to itvc_kissel.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/hydrogen_plots.py to hydrogen_plots.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/itvc_cross_validation.py to itvc_cross_validation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/itvc_section61_io.py to itvc_section61_io.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/kissel_io.py to kissel_io.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/e_scattering_plots.py to e_scattering_plots.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/van_der_waals_radii.py to van_der_waals_radii.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/e_scattering.py to e_scattering.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/distance_based_connectivity.py to distance_based_connectivity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/henke.py to henke.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/xray_scattering/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/attenuation_coefficient.py to attenuation_coefficient.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/chemical_elements.py to chemical_elements.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/read_custom_scattering_dict.py to read_custom_scattering_dict.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/covalent_radii.py to covalent_radii.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/gaussian_fit.py to gaussian_fit.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/wavelengths.py to wavelengths.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/euclidean_model_matching.py to euclidean_model_matching.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx/generate_henke_cpp.py to generate_henke_cpp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx/generate_sasaki_cpp.py to generate_sasaki_cpp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal_orientation.py to crystal_orientation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/merging/brehm_diederichs.py to brehm_diederichs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/merging/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/run_examples.py to run_examples.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints/energies.py to energies.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints/flags.py to flags.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/shelx.py to shelx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/frac_cart.py to frac_cart.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/change_hand.py to change_hand.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/guide_to_notation.py to guide_to_notation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/jv_index.py to jv_index.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/jv_asu.py to jv_asu.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/jvx.py to jvx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/web_links.py to web_links.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/dispatcher.py to dispatcher.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/all_axes.py to all_axes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/change_basis.py to change_basis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/cgi_utils.py to cgi_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/io_utils.py to io_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/multiple_cell.py to multiple_cell.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/libtbx_help.py to libtbx_help.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/wyckoff.py to wyckoff.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/replay.py to replay.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/browse_settings.py to browse_settings.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/structure_factors.py to structure_factors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/structure_factors_pdb.py to structure_factors_pdb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/explore_symmetry.py to explore_symmetry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/emma.py to emma.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/lattice_symmetry.py to lattice_symmetry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/iotbx_cif_validate.py to iotbx_cif_validate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/change_setting.py to change_setting.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/phase_o_phrenia.py to phase_o_phrenia.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/array_family/flex.py to flex.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/symmetry_search.py to symmetry_search.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/reduction_base.py to reduction_base.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/gruber_1973.py to gruber_1973.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/gruber_1973_table_1.py to gruber_1973_table_1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/determine_unit_cell/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/krivy_gruber_1976.py to krivy_gruber_1976.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_proxy_registry.py to tst_proxy_registry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_angle_derivs.py to tst_angle_derivs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/manager.py to manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/linking_class.py to linking_class.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_process_nonbonded_proxies.py to tst_process_nonbonded_proxies.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/auto_linking_types.py to auto_linking_types.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/base_geometry.py to base_geometry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/distance_least_squares.py to distance_least_squares.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/standard_cif_links.py to standard_cif_links.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/lbfgs.py to lbfgs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/process_nonbonded_proxies.py to process_nonbonded_proxies.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/energies.py to energies.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_nonbonded_overlaps.py to tst_nonbonded_overlaps.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/nonbonded_overlaps.py to nonbonded_overlaps.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/flags.py to flags.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_motif.py to tst_motif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/masks/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/auto_sharpen.py to auto_sharpen.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/segment_and_split_map.py to segment_and_split_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/wavelength_units.py to wavelength_units.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/samosa_scale.py to samosa_scale.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/precession_view.py to precession_view.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/version.py to version.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/diffuse.py to diffuse.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/euclidean_model_matching.py to euclidean_model_matching.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/structure_factor_timings.py to structure_factor_timings.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/space_group_info.py to space_group_info.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/cod_select_and_pickle.py to cod_select_and_pickle.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/brehm_diederichs.py to brehm_diederichs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/find_reticular_twin_laws.py to find_reticular_twin_laws.cpython-312.pyc /usr/lib/python3.12/dist-packages/cctbx/command_line/find_reticular_twin_laws.py:37: SyntaxWarning: invalid escape sequence '\%' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/cctbx_test_nightly.py to cctbx_test_nightly.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/subgroups.py to subgroups.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/samosa_join.py to samosa_join.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/xray_structure.show.py to xray_structure.show.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/eltbx.show_fp_fdp.py to eltbx.show_fp_fdp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/form_factor_query.py to form_factor_query.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/statistics.py to statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/translation_search.py to translation_search.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/r_free_utils.py to r_free_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller/tst_reindexing.py to tst_reindexing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller/reindexing.py to reindexing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller/display.py to display.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller/tst_map_to_asu_isym.py to tst_map_to_asu_isym.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/anharmonic.py to anharmonic.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/tst_dev.py to tst_dev.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/tst_bfgs.py to tst_bfgs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/tardy_adaptor.py to tardy_adaptor.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/dev.py to dev.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/cod_refine.py to cod_refine.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/cif_refine.py to cif_refine.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/cod_select_and_pickle.py to cod_select_and_pickle.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/bfgs.py to bfgs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/eval_iso_vs_refined.py to eval_iso_vs_refined.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/pdb_dev.py to pdb_dev.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adptbx.py to adptbx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/grow_density.py to grow_density.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/map_tools.py to map_tools.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage/validation.py to validation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/real_space_correlation.py to real_space_correlation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/tst_correlation.py to tst_correlation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/tst_composite_omit_map_2.py to tst_composite_omit_map_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/kick.py to kick.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/fem.py to fem.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/polder.py to polder.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/correlation.py to correlation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/mtriage.py to mtriage.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/tst_composite_omit_map_3.py to tst_composite_omit_map_3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/tst_map_model_cc_and_vals_per_atom_xtal.py to tst_map_model_cc_and_vals_per_atom_xtal.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/fobs_minus_fobs_map.py to fobs_minus_fobs_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/superpose.py to superpose.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/tst_composite_omit_map.py to tst_composite_omit_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/map_model_cc.py to map_model_cc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/composite_omit_map.py to composite_omit_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/invariant_domain.py to invariant_domain.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_4.py to tst_parameterization_4.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_3.py to tst_parameterization_3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_validate_H.py to tst_validate_H.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_fd_3.py to tst_riding_fd_3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/connectivity.py to connectivity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_fd_5.py to tst_riding_fd_5.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_2.py to tst_parameterization_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/riding.py to riding.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_8.py to tst_parameterization_8.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_3.py to tst_add_hydrogen_3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_fd_1.py to tst_riding_fd_1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_coefficients.py to tst_riding_coefficients.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_fd_4.py to tst_riding_fd_4.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_7.py to tst_parameterization_7.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_minimize.py to tst_riding_minimize.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_0.py to tst_add_hydrogen_0.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/parameterization.py to parameterization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_5.py to tst_parameterization_5.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_1.py to tst_parameterization_1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/find.py to find.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_2.py to tst_add_hydrogen_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_connectivity.py to tst_connectivity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_9.py to tst_parameterization_9.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_fd_2.py to tst_riding_fd_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_manager.py to tst_riding_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/build_hydrogens.py to build_hydrogens.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/validate_H.py to validate_H.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/specialised_hydrogen_atoms.py to specialised_hydrogen_atoms.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_6.py to tst_parameterization_6.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_add_hydrogen.py to tst_add_hydrogen.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/reduce_hydrogen.py to reduce_hydrogen.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suitenout.py to suitenout.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/mainchain.py to mainchain.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/transdent.py to transdent.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suiteninput.py to suiteninput.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/dualparse.py to dualparse.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suiteninit.py to suiteninit.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suitenamedefs.py to suitenamedefs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/diangle.py to diangle.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suitealyze.py to suitealyze.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suitename.py to suitename.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suites.py to suites.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_util.py to mod_util.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_input.py to mod_input.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_ga.py to mod_ga.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_optimize.py to mod_optimize.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_mtz.py to mod_mtz.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_masks.py to mod_masks.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon/tst_gui.py to tst_gui.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon/tst_polygon_data.py to tst_polygon_data.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon/output.py to output.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/alignment/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/analysis.py to analysis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/tls_as_xyz.py to tls_as_xyz.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/optimise_amplitudes.py to optimise_amplitudes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm15.py to perm15.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/command_line.py to command_line.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm10.py to perm10.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm12.py to perm12.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm13.py to perm13.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm14.py to perm14.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/ladp.py to ladp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/tools.py to tools.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/decompose.py to decompose.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm11.py to perm11.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model_vs_data.py to model_vs_data.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/tst_analyze_model.py to tst_analyze_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/backbone.py to backbone.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/tst_backbone.py to tst_backbone.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/analyze_model.py to analyze_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/domains_from_pae.py to domains_from_pae.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den/refinement.py to refinement.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den/plot_weights.py to plot_weights.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent/map_to_water.py to map_to_water.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent/ensemble_ordered_solvent.py to ensemble_ordered_solvent.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent/ordered_solvent.py to ordered_solvent.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/extend_sidechains.py to extend_sidechains.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/tst_make_library.py to tst_make_library.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/tst_extend_sidechains_2.py to tst_extend_sidechains_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/make_library.py to make_library.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/minimize_chain.py to minimize_chain.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/berkeley_ramalyze.py to berkeley_ramalyze.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/custom_gm.py to custom_gm.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/ccd.py to ccd.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/starting_conformations.py to starting_conformations.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/cablam_idealization.py to cablam_idealization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands/lifi.py to lifi.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands/tst_00.py to tst_00.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/tst_extend_sidechains.py to tst_extend_sidechains.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_idealization.py to loop_idealization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/merge_models.py to merge_models.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model/f_model_info.py to f_model_info.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model/f_model.py to f_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/tst_switch_rotamers.py to tst_switch_rotamers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/ntc.py to ntc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/rotatable_bonds.py to rotatable_bonds.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/fab_elbow_angle.py to fab_elbow_angle.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/grid2d.py to grid2d.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning/probabalistic_detwinning.py to probabalistic_detwinning.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning/twin_f_model.py to twin_f_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model/restraints.py to restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model/statistics.py to statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model/model.py to model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/real_space/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/real_space/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py to tst_kb_sol_u_star_fd.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/example2.py to example2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/scaler.py to scaler.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/example.py to example.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/f_model_all_scales.py to f_model_all_scales.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_aniso_scaler.py to tst_aniso_scaler.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/multi_mask_bulk_solvent.py to multi_mask_bulk_solvent.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/mosaic.py to mosaic.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/kbu_refinery.py to kbu_refinery.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_mosaic.py to tst_mosaic.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_flat_nonuniform.py to tst_flat_nonuniform.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_bulk_solvent_and_scaling.py to tst_bulk_solvent_and_scaling.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/bulk_solvent_and_scaling.py to bulk_solvent_and_scaling.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py to tst_fit_kexpb_to_ktotal.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_scaler.py to tst_scaler.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components/cif_parser.py to cif_parser.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder_1.py to tst_polder_1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_probe.py to tst_probe.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_msa.py to tst_msa.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_isomorphous_difference_misc.py to tst_isomorphous_difference_misc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_maps_misc.py to tst_maps_misc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_model_map.py to tst_model_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_angle.py to tst_angle.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_ligand_ncs.py to tst_ligand_ncs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_process_predicted_model.py to tst_process_predicted_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_geo_min_restraints_phil.py to tst_geo_min_restraints_phil.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_table_one.py to tst_table_one.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_real_space_correlation.py to tst_real_space_correlation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_schrodinger_interface.py to tst_schrodinger_interface.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_adp_restraints.py to tst_adp_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_refine_anomalous_substructure.py to tst_refine_anomalous_substructure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_add_arrows_on_plot.py to tst_add_arrows_on_plot.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_command_line_input.py to tst_command_line_input.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_reduce_timeout.py to tst_reduce_timeout.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_map_coeffs_simple.py to tst_map_coeffs_simple.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_sequence_validation.py to tst_sequence_validation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_loop_closure.py to tst_loop_closure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder.py to tst_polder.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_multi_residue_class.py to tst_multi_residue_class.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_ringer.py to tst_ringer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_fmodel.py to tst_fmodel.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_cis_trans_peptide_link.py to tst_cis_trans_peptide_link.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_4muy.py to tst_formula_t_S_10_vs_11_4muy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_get_t_scheme.py to tst_get_t_scheme.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls_analysis.py to tst_tls_analysis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls_optimise_amplitudes.py to tst_tls_optimise_amplitudes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_01.py to tst_u_tls_vs_u_ens_01.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_00.py to tst_u_tls_vs_u_ens_00.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls.py to tst_tls.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_04.py to tst_u_tls_vs_u_ens_04.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls_refinement_fft.py to tst_tls_refinement_fft.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_2igd.py to tst_formula_t_S_10_vs_11_2igd.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls_as_xyz.py to tst_tls_as_xyz.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_02.py to tst_u_tls_vs_u_ens_02.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_03.py to tst_u_tls_vs_u_ens_03.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls_utils.py to tst_tls_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/make_fake_anomalous_data.py to make_fake_anomalous_data.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_helix_sheet_recs_as_pdb_files.py to tst_helix_sheet_recs_as_pdb_files.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_cablam.py to tst_cablam.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder_ccs.py to tst_polder_ccs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_add_h_to_water.py to tst_add_h_to_water.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_flipping_his.py to tst_flipping_his.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_model_vs_sequence.py to tst_model_vs_sequence.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder_2.py to tst_polder_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_cif_as_mtz_wavelengths.py to tst_cif_as_mtz_wavelengths.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_find_ncs.py to tst_find_ncs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_ml_estimate.py to tst_ml_estimate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_pdbtools.py to tst_pdbtools.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_statistics_output.py to tst_statistics_output.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_validate_ligands.py to tst_validate_ligands.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_utils_merge_models.py to tst_model_utils_merge_models.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_get_vdw_radii.py to tst_model_get_vdw_radii.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_remove_alternative_conformations.py to tst_model_remove_alternative_conformations.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_2.py to tst_model_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_mtrix.py to tst_model_mtrix.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_cart_ref_restraints.py to tst_model_cart_ref_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_ramachandran.py to tst_model_ramachandran.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_dedeuterate.py to tst_model_dedeuterate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model.py to tst_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_biomt_mtrix.py to tst_model_biomt_mtrix.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_symmetry.py to tst_model_symmetry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_merge.py to tst_model_merge.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_biomt_mtrix_2.py to tst_model_biomt_mtrix_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_ncs.py to tst_model_ncs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_tors_ref_restraints.py to tst_model_tors_ref_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_neutralize_scatterers.py to tst_model_neutralize_scatterers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_set_hydrogen_bond_length.py to tst_model_set_hydrogen_bond_length.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_geometry_minimization.py to tst_geometry_minimization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_cc_star.py to tst_cc_star.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_alignment.py to tst_alignment.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_map_type_parser.py to tst_map_type_parser.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_chain_comparison.py to tst_chain_comparison.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_fix_rotamer_outliers.py to tst_fix_rotamer_outliers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_fmodel_misc.py to tst_fmodel_misc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_prune_model.py to tst_prune_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_regularize_from_pdb.py to tst_regularize_from_pdb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder_3.py to tst_polder_3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_rank_scale_map.py to tst_rank_scale_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_apply_cif_restraints.py to tst_apply_cif_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_altloc_chain_break.py to tst_altloc_chain_break.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_model_vs_map.py to tst_model_vs_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_origin_ids.py to tst_origin_ids.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints.py to tst_minimization_ncs_constraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_ncs_search_flips.py to tst_ncs_search_flips.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_ncs_restraints_group_list.py to tst_ncs_restraints_group_list.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_geometry_minimization_ncs_constraints.py to tst_geometry_minimization_ncs_constraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints_real_space.py to tst_minimization_ncs_constraints_real_space.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints2.py to tst_minimization_ncs_constraints2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints3.py to tst_minimization_ncs_constraints3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_ncs_search.py to tst_ncs_search.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_restraints.py to tst_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_ncs_utils.py to tst_ncs_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_mtz2map.py to tst_mtz2map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_domains_from_pae.py to tst_domains_from_pae.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_models_to_from_chains.py to tst_models_to_from_chains.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_rigid_bond_test.py to tst_rigid_bond_test.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_dynamics_cli.py to tst_dynamics_cli.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_map_model_cc.py to tst_map_model_cc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_examples.py to tst_examples.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_sort_hetatms.py to tst_sort_hetatms.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_find_ss_structure.py to tst_find_ss_structure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_clashes.py to tst_clashes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_minimize_chain.py to tst_minimize_chain.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_fmodel_2.py to tst_fmodel_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_special_term_at_end.py to tst_special_term_at_end.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_scattering_type_registry.py to tst_scattering_type_registry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_metal_link_1.py to tst_metal_link_1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_fmodel_fd.py to tst_fmodel_fd.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_psi_phi_extraction.py to tst_psi_phi_extraction.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder_box.py to tst_polder_box.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_fmodel_no_cryst1.py to tst_fmodel_no_cryst1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_validation_summary.py to tst_validation_summary.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_altloc_remediate.py to tst_altloc_remediate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_reduce.py to tst_reduce.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_sampled_model_density.py to tst_sampled_model_density.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_anomalous_substructure.py to tst_anomalous_substructure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_superpose.py to tst_superpose.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_validate_mg.py to tst_validate_mg.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pick_approx_zn.py to tst_pick_approx_zn.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_validate_ca.py to tst_validate_ca.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_geometries.py to tst_geometries.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/geometry.py to geometry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/identify.py to identify.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/environment.py to environment.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pick_k.py to tst_pick_k.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pick_ca_svm.py to tst_pick_ca_svm.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pickle.py to tst_pickle.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_environment.py to tst_environment.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm/dump_sites.py to dump_sites.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm/tst_classifier.py to tst_classifier.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_symmetry_axis.py to tst_symmetry_axis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_parameters.py to tst_parameters.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/build.py to build.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pick_ca.py to tst_pick_ca.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pick_mg.py to tst_pick_mg.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/halides.py to halides.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/process_predicted_model.py to process_predicted_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/tst_segid.py to tst_segid.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/ss_validation.py to ss_validation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/secondary_structure_params.py to secondary_structure_params.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/tst_insertion_codes.py to tst_insertion_codes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/proteins.py to proteins.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/find_ss_from_ca.py to find_ss_from_ca.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/regularize_from_pdb.py to regularize_from_pdb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/nucleic_acids.py to nucleic_acids.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/tst_2.py to tst_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/ss_idealization.py to ss_idealization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/tst_3.py to tst_3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/tst_1.py to tst_1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/tst_io.py to tst_io.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/tst_ss_id_ncs.py to tst_ss_id_ncs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rsr/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rsr/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/altloc.py to altloc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/topology.py to topology.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/clash.py to clash.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/shared_types.py to shared_types.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/sphere_surface_sampling.py to sphere_surface_sampling.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/asa.py to asa.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/indexing.py to indexing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/restraints.py to restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/ramachandran_eval.py to ramachandran_eval.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/tst_geostd_vs_sidechain_angles_props.py to tst_geostd_vs_sidechain_angles_props.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/nqh.py to nqh.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/ramachandran_eval_deprecated.py to ramachandran_eval_deprecated.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/graphics.py to graphics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/tst_rotamer_eval.py to tst_rotamer_eval.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/rotamer_eval.py to rotamer_eval.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/n_dim_table.py to n_dim_table.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/sidechain_angles.py to sidechain_angles.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/cif_triage.py to cif_triage.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_metal_coordination.py to tst_metal_coordination.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_cif_triage.py to tst_cif_triage.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_correct_hydrogens.py to tst_correct_hydrogens.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/idealized_aa.py to idealized_aa.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_selection.py to tst_selection.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_chg.py to tst_chg.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_geo_reduce_for_tardy.py to tst_geo_reduce_for_tardy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_rna_dna_interpretation.py to tst_rna_dna_interpretation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/pdb_interpretation.py to pdb_interpretation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/populate_auto_linking_origin_ids.py to populate_auto_linking_origin_ids.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_ncs_processing.py to tst_pdb_interpretation_ncs_processing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_tyr_from_gly_and_bnz.py to tst_tyr_from_gly_and_bnz.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_iron_sulfur_clusters.py to tst_iron_sulfur_clusters.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/correct_hydrogen_geometries.py to correct_hydrogen_geometries.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_glyco_coordination.py to tst_glyco_coordination.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_cif_types.py to tst_cif_types.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_superpose_ideal.py to tst_superpose_ideal.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/server.py to server.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/rotamer_utils.py to rotamer_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_rotamer_utils.py to tst_rotamer_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/linking_mixins.py to linking_mixins.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/conformation_dependent_restraints.py to conformation_dependent_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/linking_setup.py to linking_setup.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_protein_interpretation.py to tst_protein_interpretation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/cif_types.py to cif_types.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_carbo_linking.py to tst_carbo_linking.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_linking.py to tst_linking.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_idealized_aa.py to tst_idealized_aa.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/rna_sugar_pucker_analysis.py to rna_sugar_pucker_analysis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/glyco_chiral_values.py to glyco_chiral_values.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/glyco_utils.py to glyco_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/hydrogen_restrictions.py to hydrogen_restrictions.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_paral_geo.py to tst_paral_geo.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_all_cif_files.py to tst_all_cif_files.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation.py to tst_pdb_interpretation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_neutron_distance.py to tst_neutron_distance.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_3.py to tst_pdb_interpretation_3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_deuterium_terminii.py to tst_deuterium_terminii.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_2.py to tst_pdb_interpretation_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_server.py to tst_server.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/conv_v2_v3.py to conv_v2_v3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/linking_utils.py to linking_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_glyco_hand.py to tst_glyco_hand.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_rna_sugar_pucker_analysis.py to tst_rna_sugar_pucker_analysis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_motif.py to tst_motif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/bondlength_defaults.py to bondlength_defaults.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py to pdb_distances.cpython-312.pyc /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:777: SyntaxWarning: invalid escape sequence '\d' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:779: SyntaxWarning: invalid escape sequence '\w' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:816: SyntaxWarning: invalid escape sequence '\d' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:823: SyntaxWarning: invalid escape sequence '\d' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:1191: SyntaxWarning: invalid escape sequence '\d' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:1194: SyntaxWarning: invalid escape sequence '\d' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:1499: SyntaxWarning: invalid escape sequence '\d' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:1501: SyntaxWarning: invalid escape sequence '\d' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:1503: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:1505: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:1823: SyntaxWarning: invalid escape sequence '\d' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:1825: SyntaxWarning: invalid escape sequence '\d' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:1879: SyntaxWarning: invalid escape sequence '\/' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:1988: SyntaxWarning: invalid escape sequence '\d' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:1991: SyntaxWarning: invalid escape sequence '\d' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:2318: SyntaxWarning: invalid escape sequence '\d' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:2324: SyntaxWarning: invalid escape sequence '\d' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:2892: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:2979: SyntaxWarning: invalid escape sequence '\d' /usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py:2981: SyntaxWarning: invalid escape sequence '\w' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/cbd_utils.py to cbd_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/barbed_wire_analysis.py to barbed_wire_analysis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/analyze_peptides.py to analyze_peptides.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/waters.py to waters.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ligands.py to ligands.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/cbetadev.py to cbetadev.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/model_properties.py to model_properties.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ensembles.py to ensembles.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/mean_devs_VAL_THR_ILE_phi_psi.py to mean_devs_VAL_THR_ILE_phi_psi.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/comparama.py to comparama.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/chain_comparison.py to chain_comparison.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/evalurama.py to evalurama.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/probescore_ligand.py to probescore_ligand.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/mp_geo.py to mp_geo.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/kinemage_templates.py to kinemage_templates.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/datasets.py to datasets.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_experimental.py to tst_experimental.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_waters.py to tst_waters.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_mp_geo_endtoend.py to tst_mp_geo_endtoend.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_find_region_max_value.py to tst_find_region_max_value.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_omegalyze.py to tst_omegalyze.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_mp_validate_bonds.py to tst_mp_validate_bonds.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_rama_z_01.py to tst_rama_z_01.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_chiral_validation.py to tst_chiral_validation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_mp_geo.py to tst_mp_geo.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/run_restraints.py to run_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_cablam.py to tst_cablam.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_undowser.py to tst_undowser.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_keep_hydrogens.py to tst_keep_hydrogens.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_do_flips_clashscore.py to tst_do_flips_clashscore.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_2.py to tst_molprobity_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_rna_validate.py to tst_rna_validate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_rama_z_02.py to tst_rama_z_02.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_clashscore.py to tst_clashscore.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_model_properties.py to tst_model_properties.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_mp_geo_chiral_volume_cases.py to tst_mp_geo_chiral_volume_cases.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_1.py to tst_molprobity_1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_restraints.py to tst_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_ramalyze2.py to tst_ramalyze2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_cbetadev.py to tst_cbetadev.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_suitename.py to tst_suitename.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_5.py to tst_molprobity_5.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_arguments.py to tst_molprobity_arguments.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_symmetry_SS.py to tst_symmetry_SS.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_cbetadev_02.py to tst_cbetadev_02.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_ramalyze.py to tst_ramalyze.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_3.py to tst_molprobity_3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_clashscore_2.py to tst_clashscore_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_hydrogen_addition_clashscore.py to tst_hydrogen_addition_clashscore.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_4.py to tst_molprobity_4.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_cablam_2.py to tst_cablam_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_rotalyze.py to tst_rotalyze.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/mp_validate_bonds.py to mp_validate_bonds.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/restraints.py to restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/graphics.py to graphics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ramalyze.py to ramalyze.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/sequence.py to sequence.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/cablam.py to cablam.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ramachandran/convert_from_text.py to convert_from_text.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ramachandran/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/experimental.py to experimental.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/mean_devs_others_phi_psi.py to mean_devs_others_phi_psi.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/fav_lists.py to fav_lists.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/comprehensive_residue.py to comprehensive_residue.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/undowser.py to undowser.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/rna_validate.py to rna_validate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/rotalyze.py to rotalyze.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/rama_z.py to rama_z.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/clashscore.py to clashscore.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/omegalyze.py to omegalyze.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/validate_ligands.py to validate_ligands.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/convert_lists.py to convert_lists.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/mean_devs_PRO_phi_psi.py to mean_devs_PRO_phi_psi.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_05.py to tst_05.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_02.py to tst_02.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/pair_interaction.py to pair_interaction.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_00.py to tst_00.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_04.py to tst_04.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_01.py to tst_01.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_03.py to tst_03.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/atom_selection.py to atom_selection.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/arginine_geometry.py to arginine_geometry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/ss_validation.py to ss_validation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/barbed_wire_analysis.py to barbed_wire_analysis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/reduce2.py to reduce2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/ss_idealization.py to ss_idealization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/probescore_ligand.py to probescore_ligand.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/quantum_interface.py to quantum_interface.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/cbetadev.py to cbetadev.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/ntc_validation.py to ntc_validation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/suitename_old.py to suitename_old.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/polder.py to polder.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/probe2.py to probe2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/prepare_pdb_deposition.py to prepare_pdb_deposition.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/comparama.py to comparama.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/evalurama.py to evalurama.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rna_validate_puckers.py to rna_validate_puckers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rna_validate_suites.py to rna_validate_suites.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/process_predicted_model.py to process_predicted_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/mp_validate_bonds.py to mp_validate_bonds.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/emringer.py to emringer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/water_b_factors.py to water_b_factors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/mask.py to mask.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/ramalyze.py to ramalyze.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/chiral_validation.py to chiral_validation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/cablam.py to cablam.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/hydrogenate.py to hydrogenate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/cablam_idealization.py to cablam_idealization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/suitename.py to suitename.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/undowser.py to undowser.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rna_validate.py to rna_validate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/pdbtools.py to pdbtools.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rotalyze.py to rotalyze.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rna_validate_bonds.py to rna_validate_bonds.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/pdb_as_cif.py to pdb_as_cif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rama_z.py to rama_z.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/hbond.py to hbond.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/nonbonded_overlaps.py to nonbonded_overlaps.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/clashscore.py to clashscore.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/omegalyze.py to omegalyze.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/validate_ligands.py to validate_ligands.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/arrays.py to arrays.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model_info.py to f_model_info.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/proq2.py to proq2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py to tst_rigid_body_groups_from_pdb_chains.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_refinement_flags.py to tst_refinement_flags.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_real_space_simple.py to tst_real_space_simple.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_select_best_starting_model.py to tst_select_best_starting_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_anomalous_scatterer_groups.py to tst_anomalous_scatterer_groups.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/rigid_body.py to rigid_body.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/print_statistics.py to print_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tardy.py to tardy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/targets.py to targets.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/select_best_starting_model.py to select_best_starting_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_misc.py to tst_misc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/minimization.py to minimization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/refinement_flags.py to refinement_flags.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/geometry_minimization.py to geometry_minimization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/adp_refinement.py to adp_refinement.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/group.py to group.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_group.py to tst_group.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/inspect_tardy_trajectory.py to inspect_tardy_trajectory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_rigid_body.py to tst_rigid_body.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/fit_his.py to fit_his.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/fit_water.py to fit_water.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_1H.py to tst_fit_residues_1H.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/individual_sites.py to individual_sites.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/flipbase.py to flipbase.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_weight.py to tst_weight.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_2.py to tst_fit_residues_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_3.py to tst_individual_sites_3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_0.py to tst_fit_residue_0.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_aa_residue_axes_and_clusters.py to tst_aa_residue_axes_and_clusters.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/rigid_body.py to rigid_body.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_selection.py to tst_fit_residues_selection.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_1.py to tst_fit_residues_1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_flipbase.py to tst_flipbase.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_3.py to tst_fit_residues_3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_monitor.py to tst_monitor.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_5.py to tst_fit_residue_5.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_1.py to tst_individual_sites_1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_rigid_body.py to tst_rigid_body.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/fit_residue.py to fit_residue.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/weight.py to weight.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_1H.py to tst_fit_residue_1H.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_7.py to tst_fit_residue_7.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_0H.py to tst_fit_residue_0H.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/adp.py to adp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/fit_small_molecule.py to fit_small_molecule.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_4.py to tst_fit_residue_4.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_2.py to tst_individual_sites_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/explode_and_refine.py to explode_and_refine.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_4.py to tst_fit_residues_4.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_1.py to tst_fit_residue_1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_6.py to tst_fit_residues_6.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_water.py to tst_fit_water.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/occupancy.py to occupancy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_6.py to tst_fit_residue_6.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/fit_residues.py to fit_residues.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_5.py to tst_fit_residues_5.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_2.py to tst_fit_residue_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_3.py to tst_fit_residue_3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_group_2.py to tst_group_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/flip_peptide_side_chain.py to flip_peptide_side_chain.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/wx_tardy_pdb.py to wx_tardy_pdb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/orca.py to orca.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/weights_params.py to weights_params.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/minimization_ncs_constraints.py to minimization_ncs_constraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/anomalous_scatterer_groups.py to anomalous_scatterer_groups.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_fit_rotamers.py to tst_fit_rotamers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/energy_monitor.py to energy_monitor.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement/ensemble_probability.py to ensemble_probability.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement/ensemble_utils.py to ensemble_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/minimization_monitor.py to minimization_monitor.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/occupancies.py to occupancies.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_occupancy_selections.py to tst_occupancy_selections.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/electrons.py to electrons.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/tst_ready_set_utils.py to tst_ready_set_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/xtal_screens.py to xtal_screens.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/tst_xtal_screens.py to tst_xtal_screens.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/ready_set_basics.py to ready_set_basics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/chemistry.py to chemistry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/hierarchy_utils.py to hierarchy_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/rdkit_utils.py to rdkit_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/ready_set_utils.py to ready_set_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/msa.py to msa.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/massage_twin_detwin_data.py to massage_twin_detwin_data.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_bayesian_estimator.py to tst_bayesian_estimator.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/relative_scaling.py to relative_scaling.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/fa_estimation.py to fa_estimation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/xtriage.py to xtriage.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/fest.py to fest.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/bayesian_estimator.py to bayesian_estimator.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/pair_analyses.py to pair_analyses.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/mean_f_rms_f.py to mean_f_rms_f.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_massage_data.py to tst_massage_data.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/rip_scale.py to rip_scale.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_plan_sad_experiment.py to tst_plan_sad_experiment.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_mean_f_rms_f.py to tst_mean_f_rms_f.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_scaling.py to tst_scaling.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/twmad_scale.py to twmad_scale.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/absolute_scaling.py to absolute_scaling.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/data_statistics.py to data_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_xtriage_twin_analyses.py to tst_xtriage_twin_analyses.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/pre_scale.py to pre_scale.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/matthews.py to matthews.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/twin_analyses.py to twin_analyses.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/make_param.py to make_param.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/absence_likelihood.py to absence_likelihood.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/siras_scale.py to siras_scale.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/relative_wilson.py to relative_wilson.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_outlier.py to tst_outlier.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/ta_alpha_beta_calc.py to ta_alpha_beta_calc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/thorough_outlier_test.py to thorough_outlier_test.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_sigmaa.py to tst_sigmaa.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/outlier_plots.py to outlier_plots.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_xtriage.py to tst_xtriage.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/remove_outliers.py to remove_outliers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_absences.py to tst_absences.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/basic_analyses.py to basic_analyses.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/sad_scale.py to sad_scale.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/absences.py to absences.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/sigmaa_estimation.py to sigmaa_estimation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/plan_sad_experiment.py to plan_sad_experiment.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/random_omit.py to random_omit.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/sir_scale.py to sir_scale.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/outlier_rejection.py to outlier_rejection.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/superpose.py to superpose.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/atomic_environment_vectors/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/atomic_environment_vectors/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/tncs.py to tncs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ligands.py to ligands.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ncs.py to ncs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/cartesian_restraints.py to cartesian_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ncs_restraints_group_list.py to ncs_restraints_group_list.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ncs_params.py to ncs_params.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ncs_search.py to ncs_search.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ncs_utils.py to ncs_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/lattice.py to lattice.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/xmanip.py to xmanip.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/clashes.py to clashes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/qm_manager.py to qm_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/tst_c_beta_restraints.py to tst_c_beta_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/tst_reference_coordinate.py to tst_reference_coordinate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/quantum_interface.py to quantum_interface.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/geo_file_parsing.py to geo_file_parsing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/tst_manager.py to tst_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/mopac_manager.py to mopac_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/ramachandran.py to ramachandran.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/c_beta.py to c_beta.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/afitt.py to afitt.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/tst_ramachandran.py to tst_ramachandran.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py to tst_reference_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py to tst_torsion_ncs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py to torsion_ncs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/reference_model.py to reference_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py to rotamer_search.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py to tst_reference_model_ligands.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/orca_manager.py to orca_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/tst_reference_coordinate2.py to tst_reference_coordinate2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/tst_geo_file_parsing.py to tst_geo_file_parsing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/quantum_restraints_manager.py to quantum_restraints_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/qi_utils.py to qi_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/reference.py to reference.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/base_qm_manager.py to base_qm_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/external.py to external.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe/CompareOriginalAndNewProbeAtomInfo.py to CompareOriginalAndNewProbeAtomInfo.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe/Helpers.py to Helpers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe/tst_mmtbx_probe_ext.py to tst_mmtbx_probe_ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe/AtomTypes.py to AtomTypes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ias/tst_ias.py to tst_ias.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ias/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks/tst_asu_mask.py to tst_asu_mask.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks/tst_masks.py to tst_masks.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/find_tls_groups.py to find_tls_groups.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fix_rotamer_outliers.py to fix_rotamer_outliers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/estimate_bijvoet_ratio.py to estimate_bijvoet_ratio.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/show_r_factors_by_shell.py to show_r_factors_by_shell.cpython-312.pyc /usr/lib/python3.12/dist-packages/mmtbx/command_line/show_r_factors_by_shell.py:106: SyntaxWarning: invalid escape sequence '\(' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/flipbase.py to flipbase.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/grow_density.py to grow_density.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/arginine_geometry.py to arginine_geometry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/extend_sidechains.py to extend_sidechains.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/table_one.py to table_one.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/maximum_entropy_map.py to maximum_entropy_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/barbed_wire_analysis.py to barbed_wire_analysis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/development_fem.py to development_fem.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/model_vs_sequence.py to model_vs_sequence.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/reduce2.py to reduce2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/validate_ions.py to validate_ions.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/super.py to super.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cablam_training.py to cablam_training.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/analyze_peptides.py to analyze_peptides.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/monomer_library.comp_as_motif.py to monomer_library.comp_as_motif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/ss_idealization.py to ss_idealization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/maps.py to maps.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/pdb_atom_selection.py to pdb_atom_selection.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/xtriage.py to xtriage.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/probescore_ligand.py to probescore_ligand.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/real_space_correlation.py to real_space_correlation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/quantum_interface.py to quantum_interface.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/secondary_structure_validation.py to secondary_structure_validation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/prune_model.py to prune_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fest.py to fest.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/tls_as_xyz.py to tls_as_xyz.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/tls_analysis.py to tls_analysis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/models_as_chains.py to models_as_chains.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/mp_geo.py to mp_geo.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/development.aev.py to development.aev.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/validate_waters.py to validate_waters.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/pdb_interpretation.py to pdb_interpretation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/select_best_starting_model.py to select_best_starting_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/search_pdb_symmetry.py to search_pdb_symmetry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/sisa.py to sisa.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rigid_bond_test.py to rigid_bond_test.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/model_map.py to model_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cbetadev.py to cbetadev.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/analyze_static_disorder.py to analyze_static_disorder.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/ntc_validation.py to ntc_validation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/model_model_distances.py to model_model_distances.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/suitename_old.py to suitename_old.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/partial_omit_map.py to partial_omit_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/model_vs_data.py to model_vs_data.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/polder.py to polder.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/geometry_minimization.py to geometry_minimization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/simulate_low_res_data.py to simulate_low_res_data.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/emringer_score.py to emringer_score.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/pdb_view_ad_hoc.py to pdb_view_ad_hoc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/probe2.py to probe2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/prepare_pdb_deposition.py to prepare_pdb_deposition.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/get_related_ensemble.py to get_related_ensemble.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/validate_H_cl_app.py to validate_H_cl_app.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/density_modification.py to density_modification.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/f000.py to f000.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/matthews.py to matthews.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cdl_lookup.py to cdl_lookup.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/massage_data.py to massage_data.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/find_peaks_holes.py to find_peaks_holes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/r_factor_statistics.py to r_factor_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/comparama.py to comparama.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fake_f_obs.py to fake_f_obs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/evalurama.py to evalurama.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/molprobity.py to molprobity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fmodel.py to fmodel.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rna_validate_puckers.py to rna_validate_puckers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/compute_map_coefficients.py to compute_map_coefficients.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/anneal_real_space.py to anneal_real_space.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/afitt.py to afitt.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rna_validate_suites.py to rna_validate_suites.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/process_predicted_model.py to process_predicted_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/water_screen.py to water_screen.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/mp_validate_bonds.py to mp_validate_bonds.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/emringer.py to emringer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/ringer.py to ringer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/compare_ligands.py to compare_ligands.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/water_b_factors.py to water_b_factors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/mask.py to mask.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/ssm_rmsd_for_chains.py to ssm_rmsd_for_chains.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/find_residue_in_pdb.py to find_residue_in_pdb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/verify_mon_lib_data.py to verify_mon_lib_data.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rebuild_rotarama_cache.py to rebuild_rotarama_cache.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fetch_pdb.py to fetch_pdb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/ramalyze.py to ramalyze.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/chiral_validation.py to chiral_validation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/helix_sheet_recs_as_pdb_files.py to helix_sheet_recs_as_pdb_files.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cablam.py to cablam.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/hydrogenate.py to hydrogenate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cablam_idealization.py to cablam_idealization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/chains_as_models.py to chains_as_models.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/validation_summary.py to validation_summary.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/afitt_fd.py to afitt_fd.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/map_box.py to map_box.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fobs_minus_fobs_map.py to fobs_minus_fobs_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/refine_anomalous_substructure.py to refine_anomalous_substructure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rebuild_cablam_cache.py to rebuild_cablam_cache.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/superpose.py to superpose.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/tls.py to tls.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/map_to_structure_factors.py to map_to_structure_factors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/suitename.py to suitename.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/xmanip.py to xmanip.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/distance_difference.py to distance_difference.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cablam_validate.py to cablam_validate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/angle.py to angle.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/undowser.py to undowser.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/map_comparison.py to map_comparison.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fab_elbow_angle.py to fab_elbow_angle.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rna_validate.py to rna_validate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cif_as_mtz.py to cif_as_mtz.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/remove_outliers.py to remove_outliers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cc_star.py to cc_star.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/dynamics.py to dynamics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/pdbtools.py to pdbtools.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/kinemage.py to kinemage.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/apply_ncs_to_ligand.py to apply_ncs_to_ligand.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rotalyze.py to rotalyze.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/real_space_diff_map.py to real_space_diff_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/secondary_structure_restraints.py to secondary_structure_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rna_validate_bonds.py to rna_validate_bonds.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/model_vs_map.py to model_vs_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/mtz2map.py to mtz2map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/show_suspicious_residues.py to show_suspicious_residues.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rama_z.py to rama_z.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/hbond.py to hbond.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/nonbonded_overlaps.py to nonbonded_overlaps.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/model_idealization.py to model_idealization.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rank_scale_map.py to rank_scale_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/altloc_remediate.py to altloc_remediate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/reciprocal_space_arrays.py to reciprocal_space_arrays.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/plan_sad_experiment.py to plan_sad_experiment.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/map_to_model_histogram.py to map_to_model_histogram.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/strip_model.py to strip_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/mon_lib_cif_triage.py to mon_lib_cif_triage.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/clashscore.py to clashscore.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/omegalyze.py to omegalyze.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/sort_hetatms.py to sort_hetatms.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/perigee.py to perigee.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fmodel_simple.py to fmodel_simple.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/validate_ligands.py to validate_ligands.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fix_rama_outliers.py to fix_rama_outliers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/cablam_training.py to cablam_training.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/cablam_res.py to cablam_res.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/cablam_align.py to cablam_align.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/cablam_fingerprints.py to cablam_fingerprints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/fingerprints/antiparallel_beta.py to antiparallel_beta.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/fingerprints/antiparallel_beta_bridge.py to antiparallel_beta_bridge.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/fingerprints/parallel_beta.py to parallel_beta.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/fingerprints/regular_helix_definitions.py to regular_helix_definitions.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/fingerprints/how_to.py to how_to.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/fingerprints/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/cablam_math.py to cablam_math.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/cablam_validate.py to cablam_validate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/cablam/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/find_peaks.py to find_peaks.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pdbtools.py to pdbtools.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik/tst_maxlik.py to tst_maxlik.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik/max_like_non_uniform.py to max_like_non_uniform.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik/tst_max_lik.py to tst_max_lik.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik/maxlik.py to maxlik.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci/data_filtering.py to data_filtering.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci/tst_hbond.py to tst_hbond.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci/skew_kurt_plot.py to skew_kurt_plot.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci/hbond.py to hbond.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/xmanip_tasks.py to xmanip_tasks.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce/InteractionGraph.py to InteractionGraph.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce/tst_mmtbx_reduce_ext.py to tst_mmtbx_reduce_ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce/Movers.py to Movers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce/Optimizers.py to Optimizers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues/sample_rotamers.py to sample_rotamers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues/all_his.py to all_his.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues/rotamer_manager.py to rotamer_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/simulated_annealing.py to simulated_annealing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/ensemble_cd.py to ensemble_cd.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/cartesian_dynamics.py to cartesian_dynamics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/constants.py to constants.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/tst_sa.py to tst_sa.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/tst_cartesian_dynamics.py to tst_cartesian_dynamics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/rcsb_web_services.py to rcsb_web_services.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/tst_rcsb_web_services.py to tst_rcsb_web_services.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/tst_standard_geometry_cif.py to tst_standard_geometry_cif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/standard_geometry_cif.py to standard_geometry_cif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pdb_symmetry.py to pdb_symmetry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/resolve_resources.py to resolve_resources.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_omega_cdl.py to tst_omega_cdl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_02.py to tst_mcl_02.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/nucleotides.py to nucleotides.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/multi_residue_cdl_class.py to multi_residue_cdl_class.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/mcl_sf4_coordination.py to mcl_sf4_coordination.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/investigate_rotamer_space.py to investigate_rotamer_space.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/omega.py to omega.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_cdl.py to tst_cdl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_cdl_esd.py to tst_cdl_esd.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/altloc_weighting.py to altloc_weighting.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_01.py to tst_mcl_01.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_rna_dna_fragments.py to tst_rna_dna_fragments.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/rdl_database.py to rdl_database.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/metal_coordination_library.py to metal_coordination_library.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/multi_base_class.py to multi_base_class.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/testing_utils.py to testing_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/bond_angle_registry.py to bond_angle_registry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/cdl_utils.py to cdl_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/pH_dependent_restraints.py to pH_dependent_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/mcl.py to mcl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/hpdl_database.py to hpdl_database.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/rotamers.py to rotamers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/density_dependent_restraints.py to density_dependent_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_03.py to tst_mcl_03.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/cdl_setup.py to cdl_setup.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/check_cdl_database.py to check_cdl_database.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/cdl_database.py to cdl_database.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_rdl.py to tst_rdl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_hpdl.py to tst_hpdl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_cdl_nucleotides.py to tst_cdl_nucleotides.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_pH_mechanism.py to tst_pH_mechanism.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/LinkedResidues.py to LinkedResidues.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/hydrogen_bonding.py to hydrogen_bonding.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_multi_residue_rna.py to tst_multi_residue_rna.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/cdl_svl_database.py to cdl_svl_database.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/histidines.py to histidines.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/omega_database.py to omega_database.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_poly_ca_multi_residue.py to tst_poly_ca_multi_residue.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/multi_residue_class.py to multi_residue_class.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_cis_c_n_ca.py to tst_cis_c_n_ca.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/sf4_restraints.py to sf4_restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_mutli_residue.py to tst_mutli_residue.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/density_modification/tst_density_modification.py to tst_density_modification.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/density_modification/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/tst_em_rscc.py to tst_em_rscc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/em_rolling.py to em_rolling.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/em_rscc.py to em_rscc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/tst_emringer.py to tst_emringer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/emringer.py to emringer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/em_scoring.py to em_scoring.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cli_parser.py to cli_parser.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/simple_parser.py to simple_parser.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ranges.py to ranges.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/table_one.py to table_one.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_plots.py to data_plots.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/map_tools.py to map_tools.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/reflection_file_converter.py to reflection_file_converter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/tst_detectors.py to tst_detectors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/npy.py to npy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/adsc.py to adsc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/macscience.py to macscience.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/adsc_minicbf.py to adsc_minicbf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/edf.py to edf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/noir.py to noir.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/dtrek.py to dtrek.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/hamamatsu.py to hamamatsu.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/pilatus_slice.py to pilatus_slice.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/tst_debug_write.py to tst_debug_write.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/active_area_filter.py to active_area_filter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/image_from_http_request.py to image_from_http_request.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/tst_adsc.py to tst_adsc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/util/filters.py to filters.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/util/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/beam_center_convention.py to beam_center_convention.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/tst_py_cbf.py to tst_py_cbf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/cspad_detector_formats.py to cspad_detector_formats.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/url_support.py to url_support.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/raxis_nonsquare.py to raxis_nonsquare.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/marIP.py to marIP.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/config_detector.py to config_detector.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/endstation_max_iv_trial.py to endstation_max_iv_trial.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/endstation.py to endstation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/spot_xy_convention.py to spot_xy_convention.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/camera_convention.py to camera_convention.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/eiger.py to eiger.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/adsc_module.py to adsc_module.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/saturn.py to saturn.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/generic_detector.py to generic_detector.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/cbf.py to cbf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/bruker.py to bruker.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/tst_cbf_comp_read_meth.py to tst_cbf_comp_read_meth.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/mar.py to mar.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/test_raxis2.py to test_raxis2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/test_mar.py to test_mar.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/eiger_minicbf.py to eiger_minicbf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/pilatus_minicbf.py to pilatus_minicbf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/detectorbase.py to detectorbase.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/raxis.py to raxis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/raxisbase.py to raxisbase.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/tst_mtz_free_flipper.py to tst_mtz_free_flipper.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_hierarchy.py to pdb_hierarchy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/prepare_model_for_rsr.py to prepare_model_for_rsr.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_symmetry_copies.py to pdb_symmetry_copies.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/direct_methods_light.py to direct_methods_light.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/recalculate_phenix_refine_r_factors.py to recalculate_phenix_refine_r_factors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_split_chains.py to pdb_split_chains.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdbx_mmcif_tutorial.py to pdbx_mmcif_tutorial.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_tardy_conf_sampling_simple.py to pdb_tardy_conf_sampling_simple.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/mtz_convert_free_to_work.py to mtz_convert_free_to_work.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_to_map_simple.py to pdb_to_map_simple.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/mtz_free_flipper.py to mtz_free_flipper.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_shake.py to pdb_shake.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/shelx_latt_sym_to_space_group_symbol.py to shelx_latt_sym_to_space_group_symbol.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/libtbx_phil_examples.py to libtbx_phil_examples.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pymol.py to pymol.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/merge.py to merge.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/crystal_symmetry_from_hkl.py to crystal_symmetry_from_hkl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/space_group_dictionary.py to space_group_dictionary.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/tst_merge.py to tst_merge.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/tst_no_merge_original_index.py to tst_no_merge_original_index.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/no_merge_original_index.py to no_merge_original_index.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek/dtrek_symmetry_dict.py to dtrek_symmetry_dict.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek/reflnlist_reader.py to reflnlist_reader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek/crystal_symmetry_from_ref.py to crystal_symmetry_from_ref.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/format.py to format.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve/fpfm_reader.py to fpfm_reader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve/crystal_symmetry_from_inp.py to crystal_symmetry_from_inp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/reflection_file_editor.py to reflection_file_editor.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/map_model_manager.py to map_model_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/crystal_symmetry_from_any.py to crystal_symmetry_from_any.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/reflection_file_reader.py to reflection_file_reader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_rna_dna_atom_names.py to tst_rna_dna_atom_names.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/modified_aa_names.py to modified_aa_names.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/atom_selection.py to atom_selection.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remark_290_interpretation.py to remark_290_interpretation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/misc_records_output.py to misc_records_output.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_secondary_structure_2.py to tst_secondary_structure_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_hierarchy_atom_sort.py to tst_hierarchy_atom_sort.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/hybrid_36.py to hybrid_36.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/records.py to records.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_read_mtrix_records_from_cif.py to tst_read_mtrix_records_from_cif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_atom_selection_string.py to tst_atom_selection_string.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/extract_rfactors_resolutions_sigma.py to extract_rfactors_resolutions_sigma.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/secondary_structure.py to secondary_structure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_hierarchy.py to tst_hierarchy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/atom_name_interpretation.py to atom_name_interpretation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/xray_structure.py to xray_structure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/cryst1_interpretation.py to cryst1_interpretation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/nucleic_acid_codes.py to nucleic_acid_codes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_tls.py to tst_tls.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/utils.py to utils.cpython-312.pyc /usr/lib/python3.12/dist-packages/iotbx/pdb/utils.py:7: SyntaxWarning: invalid escape sequence '\{' /usr/lib/python3.12/dist-packages/iotbx/pdb/utils.py:45: SyntaxWarning: invalid escape sequence '\/' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_atom_selection.py to tst_atom_selection.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py to tst_extract_rfactors_resolutions_sigma.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_atom_name_interpretation.py to tst_atom_name_interpretation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_pdb.py to tst_pdb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/crystal_symmetry_from_pdb.py to crystal_symmetry_from_pdb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_mmcif_hierarchy_2.py to tst_mmcif_hierarchy_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_hierarchy_flip_symmetric.py to tst_hierarchy_flip_symmetric.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_mmcif_hierarchy.py to tst_mmcif_hierarchy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation/remediator.py to remediator.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation/tst_remediator.py to tst_remediator.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/amino_acid_codes.py to amino_acid_codes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/forward_compatible_pdb_cif_conversion.py to forward_compatible_pdb_cif_conversion.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/pdbe.py to pdbe.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/mmcif.py to mmcif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/modified_rna_dna_names.py to modified_rna_dna_names.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/hierarchy.py to hierarchy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/pdb_v3_cif_conversion.py to pdb_v3_cif_conversion.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/aa_utils.py to aa_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/fetch.py to fetch.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_mmcif.py to tst_mmcif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_secondary_structure.py to tst_secondary_structure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/rcsb.py to rcsb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_hierarchy_flip_symmetric_2.py to tst_hierarchy_flip_symmetric_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/experiment_type.py to experiment_type.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/download.py to download.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remark_2_interpretation.py to remark_2_interpretation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remark_3_interpretation.py to remark_3_interpretation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/web_service_api.py to web_service_api.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/rna_dna_detection.py to rna_dna_detection.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/phil.py to phil.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/validation.py to validation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/errors.py to errors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/geometry.py to geometry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/citations.py to citations.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/crystal_symmetry_from_cif.py to crystal_symmetry_from_cif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/restraints.py to restraints.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/builders.py to builders.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/model.py to model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/cod_tools.py to cod_tools.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/restraint_file_merge.py to restraint_file_merge.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/logfiles.py to logfiles.cpython-312.pyc /usr/lib/python3.12/dist-packages/iotbx/logfiles.py:19: SyntaxWarning: invalid escape sequence '\%' /usr/lib/python3.12/dist-packages/iotbx/logfiles.py:474: SyntaxWarning: invalid escape sequence '\d' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/builders_depending_on_smtbx.py to builders_depending_on_smtbx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber/strudat.py to strudat.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber/tst_strudat.py to tst_strudat.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_pdb_link_records.py to tst_pdb_link_records.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_long_resname_1.py to tst_hierarchy_long_resname_1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_forward_compatible_pdb.py to tst_hierarchy_forward_compatible_pdb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_cif_1.py to tst_cif_1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_tools.py to tst_map_tools.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_xray_scale.py to tst_xray_scale.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_pdb_as_cif.py to tst_pdb_as_cif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_sort_atoms.py to tst_sort_atoms.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_poscar.py to tst_poscar.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_reindex.py to tst_reindex.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_pdb_v3.py to tst_hierarchy_pdb_v3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_crystal_symmetry_from_any.py to tst_crystal_symmetry_from_any.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_long_chain_ids_1.py to tst_hierarchy_long_chain_ids_1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_phil.py to tst_phil.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_restraints_merge.py to tst_restraints_merge.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_call_consistency.py to tst_map_model_manager_call_consistency.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_selected_hierarchy_flip.py to tst_selected_hierarchy_flip.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_miller_sort_asu.py to tst_miller_sort_asu.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_cif_as_pdb_1atom.py to tst_cif_as_pdb_1atom.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_wildcard.py to tst_wildcard.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_model_sharpening_5.py to tst_map_model_manager_model_sharpening_5.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_2.py to tst_map_model_manager_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_phases.py to tst_phases.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_external_sharpening_7.py to tst_map_model_manager_external_sharpening_7.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_occupancies_rounding.py to tst_hierarchy_occupancies_rounding.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_mtz_as_cif.py to tst_mtz_as_cif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_pdbx_mmcif_tutorial.py to tst_pdbx_mmcif_tutorial.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_copy_select.py to tst_hierarchy_copy_select.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_group_rounding.py to tst_group_rounding.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_reflection_statistics.py to tst_reflection_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_simple_parser.py to tst_simple_parser.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_4.py to tst_map_model_manager_4.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_patterson.py to tst_patterson.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_atom_selections_10k.py to tst_atom_selections_10k.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_reflection_file_reader.py to tst_reflection_file_reader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_split_data_cif.py to tst_split_data_cif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_lattice_symmetry.py to tst_lattice_symmetry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_long_resname_4.py to tst_hierarchy_long_resname_4.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_fetch.py to tst_fetch.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_generate_n_char_string.py to tst_generate_n_char_string.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_id_str.py to tst_hierarchy_id_str.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_pdb_cif_inputs.py to tst_pdb_cif_inputs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_data_manager.py to tst_data_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_merging_statistics.py to tst_merging_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_export_scalepack_unmerged.py to tst_export_scalepack_unmerged.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_simple_map_coefficients.py to tst_simple_map_coefficients.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_manager_wrapping.py to tst_map_manager_wrapping.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_user_selections.py to tst_ncs_user_selections.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py to tst_mtrix_biomt_cmdl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs.py to tst_ncs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_input.py to tst_ncs_input.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_groups_preprocessing.py to tst_ncs_groups_preprocessing.cpython-312.pyc /usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_groups_preprocessing.py:409: SyntaxWarning: invalid escape sequence '\P' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_search_ligs.py to tst_ncs_search_ligs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_mmcif_biomt_reduction_output.py to tst_mmcif_biomt_reduction_output.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_reordered_chains.py to tst_ncs_reordered_chains.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_search_broken_chain.py to tst_ncs_search_broken_chain.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_without_validation.py to tst_ncs_without_validation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_long_resname_2.py to tst_hierarchy_long_resname_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_bioinformatics.py to tst_bioinformatics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_file_reader.py to tst_file_reader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_csv_utils.py to tst_csv_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_3.py to tst_map_model_manager_3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_manager.py to tst_map_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_data_plots.py to tst_data_plots.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_examples.py to tst_examples.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_mmcif_multimodel.py to tst_mmcif_multimodel.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager.py to tst_map_model_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_long_resname_3.py to tst_hierarchy_long_resname_3.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_box_around_molecule.py to tst_box_around_molecule.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_extract_xtal_data.py to tst_extract_xtal_data.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_cli_parser.py to tst_cli_parser.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_tls_from_map_8.py to tst_map_model_manager_tls_from_map_8.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_reflection_file_utils.py to tst_reflection_file_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_add_conformations.py to tst_add_conformations.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_split_models.py to tst_split_models.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_all_chain_ids.py to tst_all_chain_ids.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_show_systematic_absences.py to tst_show_systematic_absences.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_pdb_as_fasta.py to tst_pdb_as_fasta.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_mmcif_segids.py to tst_mmcif_segids.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_mmcif_to_from_hierarchy.py to tst_mmcif_to_from_hierarchy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py to tst_map_model_manager_half_map_sharpening_6.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py to tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_reflection_file_editor.py to tst_reflection_file_editor.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_symmetry.py to tst_symmetry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py to crystal_symmetry_from_ccp4_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mrcfile/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/poscar.py to poscar.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/symmetry.py to symmetry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs/split_data_cif.py to split_data_cif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs/box_around_molecule.py to box_around_molecule.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs/unique_with_biomt.py to unique_with_biomt.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/csv_utils.py to csv_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/phases.py to phases.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/file_reader.py to file_reader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/PrettyPrint/tables.py to tables.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/PrettyPrint/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/common.py to common.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/restraint.py to restraint.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/phil.py to phil.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/miller_array.py to miller_array.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/real_map.py to real_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/ncs_spec.py to ncs_spec.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/map_coefficients.py to map_coefficients.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/sequence.py to sequence.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/model.py to model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst_dano.py to tst_dano.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst_unmerged.py to tst_unmerged.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst_extract_from_symmetry_lib.py to tst_extract_from_symmetry_lib.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/crystal_symmetry_from_mtz.py to crystal_symmetry_from_mtz.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/extract_from_symmetry_lib.py to extract_from_symmetry_lib.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst_miller_dict.py to tst_miller_dict.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/merging_statistics.py to merging_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ncs/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/option_parser.py to option_parser.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/reflections.py to reflections.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/models.py to models.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/import_data_and_flags.py to import_data_and_flags.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/cif_conversions.py to cif_conversions.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif_mtz_data_labels.py to cif_mtz_data_labels.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map/crystal_symmetry_from_ccp4_map.py to crystal_symmetry_from_ccp4_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/ncbi_blast_xml.py to ncbi_blast_xml.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/xmlbuild.py to xmlbuild.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/local_blast.py to local_blast.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/alignment_as_hsearch.py to alignment_as_hsearch.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/homologues.py to homologues.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/pubmed.py to pubmed.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/pdb_info.py to pdb_info.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/ebi_wu_blast_xml.py to ebi_wu_blast_xml.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/structure.py to structure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.b_factor_stats.py to pdb.b_factor_stats.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/shelx.as_cif.py to shelx.as_cif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/mtz.dump.py to mtz.dump.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/show_distances.py to show_distances.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/reindex.py to reindex.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/split_data_cif.py to split_data_cif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cbf_read.py to cbf_read.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cns.transfer_crystal_symmetry.py to cns.transfer_crystal_symmetry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cns.reflection_reader.py to cns.reflection_reader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/isomorphous_difference_patterson.py to isomorphous_difference_patterson.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/xplor.map.show_summary.py to xplor.map.show_summary.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/reflection_file_converter.py to reflection_file_converter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cif.validate.py to cif.validate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.join_fragment_files.py to pdb.join_fragment_files.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.box_around_molecule.py to pdb.box_around_molecule.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/french_wilson.py to french_wilson.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/simple_map_coefficients.py to simple_map_coefficients.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/reflection_file_editor.py to reflection_file_editor.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cns.sdb_reader.py to cns.sdb_reader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/dano_as_amplitudes.py to dano_as_amplitudes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/crystal_symmetry_from_any.py to crystal_symmetry_from_any.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/reflection_file_reader.py to reflection_file_reader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_get_citation.py to pdb_get_citation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/shelx.dump_as_python.py to shelx.dump_as_python.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/shelx.as_xray_structure.py to shelx.as_xray_structure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.superpose_centers_of_mass.py to pdb.superpose_centers_of_mass.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_add_conformations.py to pdb_add_conformations.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.as_xray_structure.py to pdb.as_xray_structure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/phil.py to phil.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/reflection_statistics.py to reflection_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.print_sequence.py to pdb.print_sequence.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/mtrix_reconstruction.py to mtrix_reconstruction.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_as_fasta.py to pdb_as_fasta.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/export_scalepack_unmerged.py to export_scalepack_unmerged.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.hierarchy.py to pdb.hierarchy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.superpose_atoms_by_name.py to pdb.superpose_atoms_by_name.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/flip_symmetric_amino_acids.py to flip_symmetric_amino_acids.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/distance_least_squares.py to distance_least_squares.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/get_pubmed_citation.py to get_pubmed_citation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/build_phil_cache.py to build_phil_cache.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_remediator.py to pdb_remediator.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/biomt_reconstruction.py to biomt_reconstruction.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/file_reader.py to file_reader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/poscar_as_xray_structure.py to poscar_as_xray_structure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/sort_atoms.py to sort_atoms.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_labels_diff.py to pdb_labels_diff.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/detector_image_as_png.py to detector_image_as_png.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_show_connectivity.py to pdb_show_connectivity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cif_as_pdb.py to cif_as_pdb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/explore_metric_symmetry.py to explore_metric_symmetry.cpython-312.pyc /usr/lib/python3.12/dist-packages/iotbx/command_line/explore_metric_symmetry.py:339: SyntaxWarning: invalid escape sequence '\ ' /usr/lib/python3.12/dist-packages/iotbx/command_line/explore_metric_symmetry.py:341: SyntaxWarning: invalid escape sequence '\%' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/merging_statistics.py to merging_statistics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/effective_resolution.py to effective_resolution.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/dtrek.to_cns.py to dtrek.to_cns.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/r_free_flags_as_cns.py to r_free_flags_as_cns.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/symmetry_search.py to symmetry_search.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/r_free_flags_accumulation.py to r_free_flags_accumulation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/emma.py to emma.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/lattice_symmetry.py to lattice_symmetry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/csv_as_mtz.py to csv_as_mtz.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.link_as_geometry_restraints_edits.py to pdb.link_as_geometry_restraints_edits.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cif.as_miller_arrays.py to cif.as_miller_arrays.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/r_free_flags_completion_simple.py to r_free_flags_completion_simple.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.insert_scale_records.py to pdb.insert_scale_records.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_labels_comparison.py to pdb_labels_comparison.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_split_models.py to pdb_split_models.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_as_cif.py to pdb_as_cif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/show_systematic_absences.py to show_systematic_absences.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/mtz_as_cif.py to mtz_as_cif.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/blast_pdb.py to blast_pdb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cif.as_xray_structure.py to cif.as_xray_structure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cns_as_mtz.py to cns_as_mtz.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/unique_with_biomt.py to unique_with_biomt.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/patterson_map.py to patterson_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof/write_pcr.py to write_pcr.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof/read_pcr.py to read_pcr.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/builders.py to builders.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/wildcard.py to wildcard.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dsn6/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dsn6/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor/map.py to map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor/tst_xplormap.py to tst_xplormap.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor/ext.py to ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor/crystal_symmetry_from_map.py to crystal_symmetry_from_map.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/geometry.py to geometry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/xds_cbf.py to xds_cbf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/crystal_symmetry_from_hkl.py to crystal_symmetry_from_hkl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/integrate_hkl.py to integrate_hkl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/blank_cbf.py to blank_cbf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/xds_inp.py to xds_inp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/correction.py to correction.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/read_ascii.py to read_ascii.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/spot_xds.py to spot_xds.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/xparm.py to xparm.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/gain_cbf.py to gain_cbf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/reflection_file_utils.py to reflection_file_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/map_manager.py to map_manager.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/crystal_symmetry_from_sdb.py to crystal_symmetry_from_sdb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/space_group_symbols.py to space_group_symbols.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/xray_structure.py to xray_structure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/sdb_writer.py to sdb_writer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/pdb_remarks.py to pdb_remarks.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/miller_array.py to miller_array.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/reflection_reader.py to reflection_reader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/crystal_symmetry_utils.py to crystal_symmetry_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/sdb_reader.py to sdb_reader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/crystal_symmetry_from_inp.py to crystal_symmetry_from_inp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/tst_cns.py to tst_cns.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/index_fobs_sigma_reader.py to index_fobs_sigma_reader.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/extract_xtal_data.py to extract_xtal_data.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtrix_biomt.py to mtrix_biomt.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/tst_lex_parse_build.py to tst_lex_parse_build.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/crystal_symmetry_from_ins.py to crystal_symmetry_from_ins.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/errors.py to errors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/tokens.py to tokens.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/tst_hklf.py to tst_hklf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/lexer.py to lexer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/writer.py to writer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/write_ins.py to write_ins.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/parsers.py to parsers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/tst_fvar_encoding.py to tst_fvar_encoding.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/hklf.py to hklf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/tst_writer.py to tst_writer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/fvar_encoding.py to fvar_encoding.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/fcf.py to fcf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_program_template.py to tst_program_template.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/pyframe.py to pyframe.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_dlite.py to tst_dlite.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_path.py to tst_path.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_easy_mp_multicore.py to tst_easy_mp_multicore.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/xmlrpc_utils.py to xmlrpc_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/cli.py to cli.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/code_analysis.py to code_analysis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/subprocess_with_fixes.py to subprocess_with_fixes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/start_print_trace.py to start_print_trace.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/easy_pickle.py to easy_pickle.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/math_utils.py to math_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/objgraph.py to objgraph.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/dlite.py to dlite.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx/phil.py to phil.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx/python_string.py to python_string.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx/pubmed.py to pubmed.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/mp_handler.py to mp_handler.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/file_queue.py to file_queue.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/thread_handler.py to thread_handler.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/result.py to result.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/cluster_handler.py to cluster_handler.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/shared_resource.py to shared_resource.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/stacktrace.py to stacktrace.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/process_pool.py to process_pool.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/socket_queue.py to socket_queue.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/mainthread.py to mainthread.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/philgen.py to philgen.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/job_scheduler.py to job_scheduler.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/parallel_for.py to parallel_for.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/easy_mp.py to easy_mp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_representation.py to tst_representation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/citations.py to citations.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/copy_all.py to copy_all.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/copy_build_libtbx.py to copy_build_libtbx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/install_bat.py to install_bat.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/install_csh.py to install_csh.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/copy_runtime_sources.py to copy_runtime_sources.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/object_oriented_patterns.py to object_oriented_patterns.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_citations.py to tst_citations.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/topological_sort.py to topological_sort.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/scheduling_helpers.py to scheduling_helpers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/lsf.py to lsf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/remote.py to remote.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/polling.py to polling.cpython-312.pyc /usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/polling.py:282: SyntaxWarning: invalid escape sequence '\?' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/transfer.py to transfer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/errors.py to errors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/util.py to util.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/status.py to status.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/submission.py to submission.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/pbs_utils.py to pbs_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/scheduling.py to scheduling.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/looping.py to looping.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/communication.py to communication.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/generic.py to generic.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/sge_utils.py to sge_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/simplexml.py to simplexml.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/clusterTests.py to clusterTests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/log.py to log.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development/except_Exception.py to except_Exception.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development/xcode_build_phase.py to xcode_build_phase.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development/timers.py to timers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils/result.py to result.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils/statistics_info.py to statistics_info.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_binary_search.py to tst_binary_search.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_template.py to program_template.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/str_utils.py to str_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/subversion.py to subversion.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/version.py to version.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/path.py to path.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/pkg_utils.py to pkg_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_scheduling.py to tst_scheduling.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/wingide.py to wingide.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/xmlrpc_server_example.py to xmlrpc_server_example.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/crossmingw.py to crossmingw.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/metric_prefixes.py to metric_prefixes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_thread_utils.py to tst_thread_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/load_env.py to load_env.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_math_utils.py to tst_math_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/forward_compatibility.py to forward_compatibility.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils/parallel.py to parallel.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils/pytest.py to pytest.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/configure.py to configure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_xmlrpc_utils.py to tst_xmlrpc_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/callbacks.py to callbacks.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/complex_math.py to complex_math.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/easy_profile.py to easy_profile.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_find_unused_imports.py to tst_find_unused_imports.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/FileServer.py to FileServer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/SocketServer.py to SocketServer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/StartServer.py to StartServer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/FileClient.py to FileClient.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/FileSocket.py to FileSocket.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_str_utils.py to tst_str_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/mpi4py.py to mpi4py.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_topological_sort.py to tst_topological_sort.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/tst_experimental.py to tst_experimental.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/tokenizer.py to tokenizer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/gui_objects.py to gui_objects.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/tst_tokenizer.py to tst_tokenizer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/tst_interface.py to tst_interface.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/command_line.py to command_line.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/interface.py to interface.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/parser.py to parser.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/experimental.py to experimental.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/assert_utils.py to assert_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/table_utils.py to table_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/env_config.py to env_config.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/clear_paths.py to clear_paths.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/find_reference_cycles.py to find_reference_cycles.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/option_parser.py to option_parser.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/file_clutter.py to file_clutter.cpython-312.pyc /usr/lib/python3.12/dist-packages/libtbx/file_clutter.py:12: SyntaxWarning: invalid escape sequence '\w' /usr/lib/python3.12/dist-packages/libtbx/file_clutter.py:14: SyntaxWarning: invalid escape sequence '\w' /usr/lib/python3.12/dist-packages/libtbx/file_clutter.py:16: SyntaxWarning: invalid escape sequence '\w' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_python_code_parsing.py to tst_python_code_parsing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/try_hello_world_c.py to try_hello_world_c.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/pyplot.py to pyplot.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/prime_factors_of.py to prime_factors_of.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/epydoc_run.py to epydoc_run.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_build_path.py to show_build_path.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/install.py to install.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/check_libcpp.py to check_libcpp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/start_binary_bundle.py to start_binary_bundle.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/help.py to help.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/dtrace.py to dtrace.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_bin_path.py to show_bin_path.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_install_script_bat.py to create_install_script_bat.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/clean_clutter.py to clean_clutter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/chunk.py to chunk.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/start_process.py to start_process.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_dist_paths.py to show_dist_paths.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_tests.py to show_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/list_modules.py to list_modules.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_files.py to find_files.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/assert_not_show_diff.py to assert_not_show_diff.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/sge_qstat_counts.py to sge_qstat_counts.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_env.py to show_env.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/sge_available_slots.py to sge_available_slots.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/install_conda.py to install_conda.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/path_utility.py to path_utility.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/py_compile_all.py to py_compile_all.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_in_repositories.py to find_in_repositories.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_build_options.py to show_build_options.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/phil.py to phil.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/make_sphinx_html.py to make_sphinx_html.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_host_and_user.py to show_host_and_user.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/seconds_since_the_epoch.py to seconds_since_the_epoch.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/scons.py to scons.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/printenv.py to printenv.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/raise_exception_for_testing.py to raise_exception_for_testing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/git_avoid_merges.py to git_avoid_merges.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_number_of_processors.py to show_number_of_processors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_module_dependencies.py to show_module_dependencies.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/import_all_ext.py to import_all_ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_installer.py to create_installer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_mac_app.py to create_mac_app.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_pythonpath.py to show_pythonpath.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_include_paths.py to show_include_paths.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/analyse_code_comments.py to analyse_code_comments.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/add_from_future_import_division.py to add_from_future_import_division.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/list_source_files_sorted_by_size.py to list_source_files_sorted_by_size.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_lib_path.py to show_lib_path.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/env_run.py to env_run.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/nequal.py to nequal.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_unused_imports_crude.py to find_unused_imports_crude.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_reserved_names.py to find_reserved_names.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/list_files.py to list_files.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_commands.py to show_commands.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/line_count.py to line_count.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_numpy_version.py to show_numpy_version.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_untested.py to find_untested.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_full_command_path.py to show_full_command_path.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_unzipsfx.py to create_unzipsfx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/remote_processing.py to remote_processing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_numeric_version.py to show_numeric_version.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/run_pickled_function.py to run_pickled_function.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_variable_names.py to show_variable_names.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_all_on_path.py to show_all_on_path.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_selfx.py to create_selfx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/clear_paths.py to clear_paths.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/assert_line_count.py to assert_line_count.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/make_dist.py to make_dist.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/sphinx_build.py to sphinx_build.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/import_all_python.py to import_all_python.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/run_tests_parallel.py to run_tests_parallel.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/ipython_shell_start.py to ipython_shell_start.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_environ_usage.py to show_environ_usage.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/assert_stdin.py to assert_stdin.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/extract_code_from_txt.py to extract_code_from_txt.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_old_style_classes.py to find_old_style_classes.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/easy_qsub.py to easy_qsub.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_but_no_repr.py to show_but_no_repr.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_python_sys_executable.py to show_python_sys_executable.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_windows_exe.py to create_windows_exe.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/wait_for_file.py to wait_for_file.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/parallel_simple.py to parallel_simple.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_unused_imports.py to find_unused_imports.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_under_build.py to find_under_build.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/bootstrap.py to bootstrap.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_cctbx_bundle_for_installer.py to create_cctbx_bundle_for_installer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/assert_stdin_contains_strings.py to assert_stdin_contains_strings.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/remove_tree.py to remove_tree.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/bundle_as_exe.py to bundle_as_exe.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_repository_paths.py to show_repository_paths.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_clutter.py to find_clutter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_date_and_time.py to show_date_and_time.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/any2unix.py to any2unix.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/assert_stdin_ends_with.py to assert_stdin_ends_with.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_python_dependencies.py to show_python_dependencies.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/console_utils.py to console_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/python_code_parsing.py to python_code_parsing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_easy_mp.py to tst_easy_mp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/smart_open.py to smart_open.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/binary_search.py to binary_search.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/runtime_utils.py to runtime_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_fully_buffered_timeout.py to tst_fully_buffered_timeout.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/cluster.py to cluster.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_version.py to tst_version.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/containers.py to containers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_containers.py to tst_containers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_easy_mp_state.py to tst_easy_mp_state.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_object_oriented_patterns.py to tst_object_oriented_patterns.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/cpp_function_name.py to cpp_function_name.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_easy_pickle.py to tst_easy_pickle.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/fastentrypoints.py to fastentrypoints.cpython-312.pyc /usr/lib/python3.12/dist-packages/libtbx/fastentrypoints.py:43: SyntaxWarning: invalid escape sequence '\.' /usr/lib/python3.12/dist-packages/libtbx/fastentrypoints.py:92: SyntaxWarning: invalid escape sequence '\.' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/easy_run.py to easy_run.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/introspection.py to introspection.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/progress.py to progress.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_mac_pkg.py to create_mac_pkg.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/setup_installer.py to setup_installer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/rpath.py to rpath.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/install_distribution.py to install_distribution.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_windows_installer.py to create_windows_installer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/install_conda.py to install_conda.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_installer.py to create_installer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_mac_app.py to create_mac_app.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/package_defs.py to package_defs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/install_base_packages.py to install_base_packages.cpython-312.pyc /usr/lib/python3.12/dist-packages/libtbx/auto_build/install_base_packages.py:840: SyntaxWarning: invalid escape sequence '\$' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/write_gui_dispatcher_include.py to write_gui_dispatcher_include.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_windows_exe.py to create_windows_exe.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/installer_utils.py to installer_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/regenerate_module_files.py to regenerate_module_files.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/bootstrap.py to bootstrap.cpython-312.pyc /usr/lib/python3.12/dist-packages/libtbx/auto_build/bootstrap.py:455: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/libtbx/auto_build/bootstrap.py:457: SyntaxWarning: invalid escape sequence '\s' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_cctbx_bundle_for_installer.py to create_cctbx_bundle_for_installer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/plus_installer.py to plus_installer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/make_bundle.py to make_bundle.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_runtime_utils.py to tst_runtime_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/thread_utils.py to thread_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math/special_functions/tst_spherical_bessel_jn.py to tst_spherical_bessel_jn.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math/special_functions/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/cufft/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/cufft/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/scattering/tst_direct_summation.py to tst_direct_summation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/scattering/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/omptbx/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/omptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/phil.py to phil.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/viewers/chimerax.py to chimerax.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/viewers/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity/mod_lbfgs.py to mod_lbfgs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity/mod_kmeans.py to mod_kmeans.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity/mod_indexing_ambiguity.py to mod_indexing_ambiguity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_misc.py to mod_misc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_pdb.py to mod_pdb.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_threads.py to mod_threads.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_results.py to mod_results.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_gui_dialogs.py to mod_gui_dialogs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_lbfgs.py to mod_lbfgs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_gui_frames.py to mod_gui_frames.cpython-312.pyc /usr/lib/python3.12/dist-packages/prime/postrefine/mod_gui_frames.py:750: SyntaxWarning: invalid escape sequence '\A' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_merge_data.py to mod_merge_data.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_util.py to mod_util.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_mx.py to mod_mx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_input.py to mod_input.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_leastsqr.py to mod_leastsqr.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_run.py to mod_run.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_lbfgs_partiality.py to mod_lbfgs_partiality.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_perf.py to mod_perf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_partiality.py to mod_partiality.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_outlier.py to mod_outlier.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_plotter.py to mod_plotter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/postrefine.py to postrefine.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/plot_energy_spectrum.py to plot_energy_spectrum.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/spot_param_visualizer.py to spot_param_visualizer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/viewstats.py to viewstats.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/mpi_scale.py to mpi_scale.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/change_basis.py to change_basis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/run.py to run.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/r_mtz_mtz.py to r_mtz_mtz.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/plotstats.py to plotstats.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/prime_gui.py to prime_gui.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/solve_indexing_ambiguity.py to solve_indexing_ambiguity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/mpi_run.py to mpi_run.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/ray_trace.py to ray_trace.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/comparestats.py to comparestats.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/view_fineslices.py to view_fineslices.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/frame_extractor_by_scan.py to frame_extractor_by_scan.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/change_path_indexing_ambiguity.py to change_path_indexing_ambiguity.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/print_integration_pickle.py to print_integration_pickle.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/cluster_isoform.py to cluster_isoform.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/explore_twin_operators.py to explore_twin_operators.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/compare_solution_pickles.py to compare_solution_pickles.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/iotacc.py to iotacc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/postrefine.py to postrefine.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/isoform_cluster/mod_isoform_cluster.py to mod_isoform_cluster.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/prime/isoform_cluster/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/nexus/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/flumpy.py to flumpy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking/SmarGonShadowMask.py to SmarGonShadowMask.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/imageset.py to imageset.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFRayonixESRF.py to FormatTIFFRayonixESRF.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNexusJungfrauExt.py to FormatNexusJungfrauExt.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5Sacla.py to FormatHDF5Sacla.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTC.py to FormatXTC.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSER.py to FormatSER.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusSOLEILPX16MSN106.py to FormatCBFMiniPilatusSOLEILPX16MSN106.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI41.py to TemplatePYCXI41.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatMultiImage.py to FormatMultiImage.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerPhotonFactory.py to FormatCBFMiniEigerPhotonFactory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCmlfsom.py to FormatSMVADSCmlfsom.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS6MSN126.py to FormatCBFFullPilatusDLS6MSN126.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerDLS16MSN160.py to FormatCBFMiniEigerDLS16MSN160.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniADSCHF4M.py to FormatCBFMiniADSCHF4M.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNexus.py to FormatNexus.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFCspad.py to FormatCBFCspad.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTCEpix.py to FormatXTCEpix.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN09040159.py to FormatSMVRigakuSaturnSN09040159.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigaku.py to FormatSMVRigaku.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py to FormatCBFMiniPilatusSPring8_6MSN125.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN11480296.py to FormatSMVRigakuSaturnSN11480296.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI7d.py to TemplatePYCXI7d.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN07400090.py to FormatSMVRigakuSaturnSN07400090.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFBruker.py to FormatTIFFBruker.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMultiTileHierarchy.py to FormatCBFMultiTileHierarchy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5SaclaRayonix.py to FormatHDF5SaclaRayonix.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatBrukerPhoton.py to FormatBrukerPhoton.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxDLS16M.py to FormatNXmxDLS16M.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxEigerFilewriter.py to FormatNXmxEigerFilewriter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxDLSI19_2.py to FormatNXmxDLSI19_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI31.py to TemplatePYCXI31.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDESY6MSN115.py to FormatCBFMiniPilatusDESY6MSN115.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusCHESS_6MSN127.py to FormatCBFMiniPilatusCHESS_6MSN127.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFF.py to FormatTIFF.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNexusJungfrauHack.py to FormatNexusJungfrauHack.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN915.py to FormatSMVADSCSN915.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatRAXISIVSpring8.py to FormatRAXISIVSpring8.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatROD.py to FormatROD.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatPYunspecified.py to FormatPYunspecified.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVHamamatsuSPring8BL32XU.py to FormatSMVHamamatsuSPring8BL32XU.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114.py to FormatCBFMiniPilatusDLS6MSN114.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVNOIR.py to FormatSMVNOIR.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatRAXIS.py to FormatRAXIS.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN.py to FormatSMVADSCSN.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXDS.py to FormatXDS.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCDBG.py to FormatSMVADSCDBG.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuA200SPring8BL26B1.py to FormatSMVRigakuA200SPring8BL26B1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatStill.py to FormatStill.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTCMultipleDetectors.py to FormatXTCMultipleDetectors.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFRayonix.py to FormatTIFFRayonix.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusHelpers.py to FormatCBFMiniPilatusHelpers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN928.py to FormatSMVADSCSN928.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuA200.py to FormatSMVRigakuA200.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTCCspad.py to FormatXTCCspad.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCNoDateStamp.py to FormatSMVADSCNoDateStamp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVHamamatsu.py to FormatSMVHamamatsu.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatBrukerFixedChi.py to FormatBrukerFixedChi.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxEigerFilewriterESRFID232.py to FormatNXmxEigerFilewriterESRFID232.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS300KSN104.py to FormatCBFFullPilatusDLS300KSN104.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMini.py to FormatCBFMini.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN445.py to FormatSMVADSCSN445.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFRayonixXPP.py to FormatTIFFRayonixXPP.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/Format.py to Format.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxDLS.py to FormatNXmxDLS.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerMaxIVBio.py to FormatCBFMiniEigerMaxIVBio.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxDLS16MI03.py to FormatNXmxDLS16MI03.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEiger.py to FormatCBFMiniEiger.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI71.py to TemplatePYCXI71.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatMRC.py to FormatMRC.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFull.py to FormatCBFFull.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py to FormatCBFMiniPilatusDLS6MSN100.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVJHSim.py to FormatSMVJHSim.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatEDFALS733.py to FormatEDFALS733.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI51.py to TemplatePYCXI51.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSNAPSID19.py to FormatSMVADSCSNAPSID19.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatGatanDM4.py to FormatGatanDM4.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuPilatus.py to FormatSMVRigakuPilatus.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5Lambda.py to FormatHDF5Lambda.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVTimePix_SU.py to FormatSMVTimePix_SU.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS12M.py to FormatCBFMiniPilatusDLS12M.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatPYunspecifiedStill.py to FormatPYunspecifiedStill.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSC.py to FormatSMVADSC.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatus3APS19ID6MSN132.py to FormatCBFMiniPilatus3APS19ID6MSN132.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatPilatusHelpers.py to FormatPilatusHelpers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatDIP2030b.py to FormatDIP2030b.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatBruker.py to FormatBruker.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerPetraP14.py to FormatCBFMiniEigerPetraP14.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5EigerNearlyNexus.py to FormatHDF5EigerNearlyNexus.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatPYmultitile.py to FormatPYmultitile.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMV.py to FormatSMV.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMultiTile.py to FormatCBFMultiTile.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatMarIP.py to FormatMarIP.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBF.py to FormatCBF.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFullPilatus.py to FormatCBFFullPilatus.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN457.py to FormatSMVADSCSN457.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatMultiImageLazy.py to FormatMultiImageLazy.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatPY.py to FormatPY.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVCMOS1.py to FormatSMVCMOS1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN126.py to FormatCBFMiniPilatusDLS6MSN126.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI61.py to TemplatePYCXI61.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/nxmx_writer.py to nxmx_writer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN920.py to FormatSMVADSCSN920.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5.py to FormatHDF5.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5PAL.py to FormatHDF5PAL.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmx.py to FormatNXmx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuEiger.py to FormatSMVRigakuEiger.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxED.py to FormatNXmxED.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN926.py to FormatSMVADSCSN926.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN119.py to FormatCBFMiniPilatusDLS6MSN119.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTCRayonix.py to FormatXTCRayonix.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFHelpers.py to FormatTIFFHelpers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5EigerNearlyNexusSPring8.py to FormatHDF5EigerNearlyNexusSPring8.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNexusTimepix2M.py to FormatNexusTimepix2M.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/nexus.py to nexus.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuSaturnNoTS.py to FormatSMVRigakuSaturnNoTS.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuSaturn.py to FormatSMVRigakuSaturn.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusXXX.py to FormatCBFMiniPilatusXXX.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/Registry.py to Registry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5SaclaMPCCD.py to FormatHDF5SaclaMPCCD.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN905.py to FormatSMVADSCSN905.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTCJungfrau.py to FormatXTCJungfrau.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerChessID7B2.py to FormatCBFMiniEigerChessID7B2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI32.py to TemplatePYCXI32.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114DMM.py to FormatCBFMiniPilatusDLS6MSN114DMM.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN442.py to FormatSMVADSCSN442.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatRAXISII.py to FormatRAXISII.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/cbf_writer.py to cbf_writer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS6MSN100.py to FormatCBFFullPilatusDLS6MSN100.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatus.py to FormatCBFMiniPilatus.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFullByteOffset.py to FormatCBFFullByteOffset.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/image.py to image.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFRayonixSPring8.py to FormatTIFFRayonixSPring8.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util/dlsnxs2cbf.py to dlsnxs2cbf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util/rotate_and_average.py to rotate_and_average.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize/imageset.py to imageset.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize/filename.py to filename.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize/load.py to load.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize/xds.py to xds.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/version.py to version.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/example/to_xds.py to to_xds.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/example/resolution_corners.py to resolution_corners.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/compare.py to compare.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/detector.py to detector.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/detector_helpers.py to detector_helpers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/scan.py to scan.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/detector_helpers_types.py to detector_helpers_types.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/goniometer.py to goniometer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/crystal.py to crystal.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/scan_helpers.py to scan_helpers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/profile.py to profile.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/experiment_list.py to experiment_list.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/beam.py to beam.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/ext.py to ext.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/show_registry.py to show_registry.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/install_format.py to install_format.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/debug_memory.py to debug_memory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/depends_on.py to depends_on.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/plot_detector_models.py to plot_detector_models.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/image_average.py to image_average.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/dlsnxs2cbf.py to dlsnxs2cbf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/detector_superpose.py to detector_superpose.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/saturation.py to saturation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/print_matching_images.py to print_matching_images.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/show_matching_formats.py to show_matching_formats.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/image2pickle.py to image2pickle.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/show_mask_info.py to show_mask_info.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/overload.py to overload.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/read_sequence.py to read_sequence.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/print_header.py to print_header.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/display_parallax_correction.py to display_parallax_correction.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/radial_average.py to radial_average.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/datablock.py to datablock.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/sequence_filenames.py to sequence_filenames.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/filecache.py to filecache.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/filecache_controller.py to filecache_controller.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs/PILATUS_300K_S_N_3_0104_Diamond.py to PILATUS_300K_S_N_3_0104_Diamond.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs/PILATUS_2M_S_N_24_0107_Diamond.py to PILATUS_2M_S_N_24_0107_Diamond.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/generate_fonts_ucs_cpp.py to generate_fonts_ucs_cpp.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/gl_managed.py to gl_managed.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_viewer.py to wx_viewer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/generate_functions_bpl.py to generate_functions_bpl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/generate_defines_bpl.py to generate_defines_bpl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/fonts.py to fonts.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_ellipsoids_test.py to wx_ellipsoids_test.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_viewer_leapmotion.py to wx_viewer_leapmotion.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/quadrics.py to quadrics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/viewer_utils.py to viewer_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/util.py to util.cpython-312.pyc /usr/lib/python3.12/dist-packages/gltbx/util.py:61: SyntaxWarning: invalid escape sequence '\d' byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/extract_opengl_specs.py to extract_opengl_specs.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/gl.py to gl.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/tst_viewer_utils.py to tst_viewer_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/tst_ellipsoids.py to tst_ellipsoids.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/images.py to images.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_motion_on_tab.py to wx_motion_on_tab.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/command_line/try_imports.py to try_imports.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_cube.py to wx_cube.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/glu.py to glu.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_scene.py to wx_scene.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/tst_fonts.py to tst_fonts.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_viewers_images.py to wx_viewers_images.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_viewer_example.py to wx_viewer_example.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/hydrogens_button.py to hydrogens_button.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/simple_zoom_list.py to simple_zoom_list.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/watch_file.py to watch_file.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/interactive_edit.py to interactive_edit.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/ligand_checklist.py to ligand_checklist.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/validation_lists.py to validation_lists.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/view_refinement.py to view_refinement.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/xmlrpc_server.py to xmlrpc_server.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/outlier_spots/fit_distribution.py to fit_distribution.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/outlier_spots/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/detectors/silicon.py to silicon.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/detectors/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx/tst_coordinate_frame_converter.py to tst_coordinate_frame_converter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx/coordinate_frame_converter.py to coordinate_frame_converter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx/coordinate_frame_helpers.py to coordinate_frame_helpers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/integration.py to integration.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/results_base.py to results_base.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/calibration.py to calibration.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/spotfinder_frame.py to spotfinder_frame.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/controls.py to controls.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/frame.py to frame.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/calibration_frame.py to calibration_frame.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/processing.py to processing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/drivers.py to drivers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/dataset.py to dataset.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/spotfinder_wrap.py to spotfinder_wrap.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/display.py to display.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/indexing.py to indexing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/pixels3d.py to pixels3d.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bandpass/simulated_annealing.py to simulated_annealing.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bandpass/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/spot_shape.py to spot_shape.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/pixel_spread.py to pixel_spread.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/index.py to index.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/stats_index.py to stats_index.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/oscillation_shots.py to oscillation_shots.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/speckfinder.py to speckfinder.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dials_core/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dials_core/integration_core.py to integration_core.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/uc_frame.py to uc_frame.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/ring_frame.py to ring_frame.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/pyslip.py to pyslip.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/frame.py to frame.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/slip_viewer_image_factory.py to slip_viewer_image_factory.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/tile_generation.py to tile_generation.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/calibration_frame.py to calibration_frame.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/slip_display.py to slip_display.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/example_frame_plugin_hidden.py to example_frame_plugin_hidden.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/score_frame.py to score_frame.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/slip_helpers.py to slip_helpers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/dual_resolution_helpers.py to dual_resolution_helpers.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/simple_integration.py to simple_integration.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/deltapsi_refinement_preceding_integration.py to deltapsi_refinement_preceding_integration.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/dials_refinement_preceding_integration.py to dials_refinement_preceding_integration.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/util.py to util.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/stills_integration.py to stills_integration.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/spot_markup.py to spot_markup.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/ersatz_misset.py to ersatz_misset.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/uc1_2_positions_idx.py to uc1_2_positions_idx.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/uc1_2a.py to uc1_2a.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/compare_mosflm_xds.py to compare_mosflm_xds.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/uc1_2.py to uc1_2.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/uc1_2_validate.py to uc1_2_validate.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model/detector.py to detector.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model/tst_detector_model.py to tst_detector_model.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model/instrument_specifics.py to instrument_specifics.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/uc1_2_positions.py to uc1_2_positions.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/utils.py to utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing/tst_auto_monoscan.py to tst_auto_monoscan.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing/tst_dataset1.py to tst_dataset1.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing/do_index.py to do_index.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/run_spotfinder.py to run_spotfinder.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/wx_display.py to wx_display.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/solver.py to solver.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/integrate_crude.py to integrate_crude.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/refine_uc_cr.py to refine_uc_cr.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/tst.py to tst.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/create.py to create.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/run_labelit_index.py to run_labelit_index.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/explore_completeness.py to explore_completeness.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support/change_basis.py to change_basis.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support/tst_sublattice.py to tst_sublattice.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil/phil_preferences.py to phil_preferences.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil/preferences.py to preferences.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil/scope.py to scope.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/force_cell.py to force_cell.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/nearest_neighbor.py to nearest_neighbor.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/outlier_detection.py to outlier_detection.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/outlier_procedure.py to outlier_procedure.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/test_dps.py to test_dps.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/sampling.py to sampling.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/tools.py to tools.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/lattice.py to lattice.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/basis_choice.py to basis_choice.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/array_family/flex.py to flex.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/cell_assessment.py to cell_assessment.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/zuoreduction.py to zuoreduction.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/constrainment.py to constrainment.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/sampling.py to sampling.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/lepage.py to lepage.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/basis_choice.py to basis_choice.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/tst_iotbx_converter.py to tst_iotbx_converter.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/simage.explore_completeness.py to simage.explore_completeness.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/index.py to index.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/simage.solver.py to simage.solver.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/viewer.py to viewer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/example_viewer.py to example_viewer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/slip_viewer.py to slip_viewer.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/simage.create.py to simage.create.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/simage.wx_display.py to simage.wx_display.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/tst_ewald_sphere.py to tst_ewald_sphere.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg/tst_utils_clustering.py to tst_utils_clustering.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg/tst_bragg_minimal.py to tst_bragg_minimal.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/tst_predict.py to tst_predict.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/tst_partial_derivatives.py to tst_partial_derivatives.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation/constants.py to constants.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation/sim_utils.py to sim_utils.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation/sim_pdf.py to sim_pdf.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation/tst_xfel1_simple.py to tst_xfel1_simple.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/subgroup.py to subgroup.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints/g_gradients.py to g_gradients.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints/parameter_reduction.py to parameter_reduction.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/sgtbx_adaptor.py to sgtbx_adaptor.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation/max_like.py to max_like.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation/util.py to util.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/jungfrau.py to jungfrau.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/rayonix.py to rayonix.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/xtc.py to xtc.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology/metrology.py to metrology.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology/generic_detector.py to generic_detector.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology/cspad_detector.py to cspad_detector.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/cspad.py to cspad.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util/time.py to time.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util/construct_frame.py to construct_frame.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util/energy_scan_notch_finder.py to energy_scan_notch_finder.cpython-312.pyc byte-compiling /<>/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/__init__.py to __init__.cpython-312.pyc running install_egg_info running egg_info writing src/dxtbx.egg-info/PKG-INFO writing dependency_links to src/dxtbx.egg-info/dependency_links.txt writing entry points to src/dxtbx.egg-info/entry_points.txt writing top-level names to src/dxtbx.egg-info/top_level.txt reading manifest file 'src/dxtbx.egg-info/SOURCES.txt' adding license file 'LICENSE.txt' adding license file 'AUTHORS' writing manifest file 'src/dxtbx.egg-info/SOURCES.txt' Copying src/dxtbx.egg-info to /<>/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx-3.17.0.egg-info Skipping SOURCES.txt running install_scripts Installing cxi.image2pickle script to /<>/debian/tmp/usr/bin Installing cxi.image_average script to /<>/debian/tmp/usr/bin Installing dev.dxtbx.debug_memory script to /<>/debian/tmp/usr/bin Installing dev.dxtbx.read_sequence script to /<>/debian/tmp/usr/bin Installing dxtbx.depends_on script to /<>/debian/tmp/usr/bin Installing dxtbx.detector_superpose script to /<>/debian/tmp/usr/bin Installing dxtbx.display_parallax_correction script to /<>/debian/tmp/usr/bin Installing dxtbx.dlsnxs2cbf script to /<>/debian/tmp/usr/bin Installing dxtbx.image2pickle script to /<>/debian/tmp/usr/bin Installing dxtbx.image_average script to /<>/debian/tmp/usr/bin Installing dxtbx.install_format script to /<>/debian/tmp/usr/bin Installing dxtbx.overload script to /<>/debian/tmp/usr/bin Installing dxtbx.plot_detector_models script to /<>/debian/tmp/usr/bin Installing dxtbx.print_header script to /<>/debian/tmp/usr/bin Installing dxtbx.print_matching_images script to /<>/debian/tmp/usr/bin Installing dxtbx.radial_average script to /<>/debian/tmp/usr/bin Installing dxtbx.saturation script to /<>/debian/tmp/usr/bin Installing dxtbx.show_mask_info script to /<>/debian/tmp/usr/bin Installing dxtbx.show_matching_formats script to /<>/debian/tmp/usr/bin Installing dxtbx.show_registry script to /<>/debian/tmp/usr/bin # specific installation for the cctbx build directory dh_auto_install -- -s custom --install-args="debian/install-cctbx.sh -- --pyver={version} --srcdir=/<> --builddir={build_dir}_ --modules='annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx'" install -m0755 -d /<>/cctbx-2023.12\+ds2\+\~3.17.0\+ds1/debian/tmp pybuild --install -i python{version} -p 3.12 -s custom "--install-args=debian/install-cctbx.sh -- --pyver={version} --srcdir=/<> --builddir={build_dir}_ --modules='annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx'" --dest-dir /<>/cctbx-2023.12\+ds2\+\~3.17.0\+ds1/debian/tmp I: pybuild base:305: debian/install-cctbx.sh -- --pyver=3.12 --srcdir=/<> --builddir='/<>/.pybuild/cpython3_3.12/build'_ --modules='annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx' debian/install-cctbx.sh: line 7: 0: command not found --pyver '3.12' --srcdir '/<>' --builddir '/<>/.pybuild/cpython3_3.12/build_' --modules 'annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx' -- Intalling CCTBX into a FHS system Modules: annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx From the source /<> build /<>/.pybuild/cpython3_3.12/build_ To the FHS : pyver 3.12 bindir /usr/bin incdir /usr/include pkglibdir /usr/lib/cctbx/python3.12 libdir /usr/lib/s390x-linux-gnu pythondir /usr/lib/python3.12/dist-packages Copying libtbx_env from /<>/.pybuild/cpython3_3.12/build_ to /<>/debian/tmp/usr/lib/cctbx/python3.12 {'_dispatcher_include_at_start': [], '_dispatcher_include_before_command': [], '_dispatcher_precall_commands': None, '_dispatcher_registry': {relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/gltbx.show_build_path"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.show_build_path"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/spotfinder.show_build_path"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/rstbx.show_build_path"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/serialtbx.show_build_path"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/wxtbx.show_build_path"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/boost.show_dist_paths"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/omptbx.show_dist_paths"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cma_es.show_dist_paths"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/fable.show_dist_paths"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/scitbx.show_dist_paths"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/annlib.show_dist_paths"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cbflib.show_dist_paths"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/ccp4io.show_dist_paths"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cctbx.show_dist_paths"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/crys3d.show_dist_paths"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/smtbx.show_dist_paths"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.show_dist_paths"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/dxtbx.show_dist_paths"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/gltbx.show_dist_paths"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.show_dist_paths"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/spotfinder.show_dist_paths"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/rstbx.show_dist_paths"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/serialtbx.show_dist_paths"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/wxtbx.show_dist_paths"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.python"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.prime_factors_of"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/prime_factors_of.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.epydoc_run"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/epydoc_run.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.show_build_path"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.install"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/install.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.check_libcpp"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/check_libcpp.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.start_binary_bundle"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", 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relocatable="bin/wxtbx.python"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/boost.show_build_path"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/omptbx.show_build_path"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cma_es.show_build_path"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/fable.show_build_path"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/annlib.show_build_path"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/scitbx.show_build_path"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cbflib.show_build_path"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/ccp4io.show_build_path"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cctbx.show_build_path"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/crys3d.show_build_path"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/smtbx.show_build_path"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.show_build_path"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/dxtbx.show_build_path"): relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py")}, 'bin_path': relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin"), 'boost_version': 108300, 'build_options': , 'build_path': absolute_path("/<>/debian/tmp/usr/lib/cctbx/python3.12"), 'command_line_redirections': {}, 'command_version_suffix': None, 'dispatcher_name': None, 'exe_path': relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="exe"), 'explicitly_requested_modules': {'annlib', 'annlib_adaptbx', 'boost_adaptbx', 'cbflib_adaptbx', 'ccp4io', 'ccp4io_adaptbx', 'cctbx', 'cma_es', 'crys3d', 'dxtbx', 'fable', 'gltbx', 'iotbx', 'libtbx', 'mmtbx', 'omptbx', 'rstbx', 'scitbx', 'serialtbx', 'smtbx', 'spotfinder', 'tbxx', 'wxtbx'}, 'full_testing': False, 'include_path': relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="include"), 'installed': False, 'installed_modules': [], 'installed_order': [], 'lib_path': relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="lib"), 'missing_for_build': set(), 'missing_for_use': set(), 'missing_optional': {'king', 'probe', 'cbflib', 'reduce', 'docutils'}, 'module_dict': {'annlib': , 'boost': , 'cbflib': , 'ccp4io': , 'cctbx': , 'chiltbx': , 'cma_es': , 'crys3d': , 'dxtbx': , 'fable': , 'gltbx': , 'iotbx': , 'libtbx': , 'mmtbx': , 'omptbx': , 'rstbx': , 'scitbx': , 'serialtbx': , 'smtbx': , 'spotfinder': , 'tbxx': , 'ucif': , 'wxtbx': }, 'module_dist_paths': {'annlib': relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../annlib"), 'annlib_adaptbx': relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../annlib_adaptbx"), 'boost': relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../boost"), 'boost_adaptbx': relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../boost_adaptbx"), 'cbflib_adaptbx': relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../cbflib_adaptbx"), 'ccp4io': relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../ccp4io"), 'ccp4io_adaptbx': relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../ccp4io_adaptbx"), 'cctbx': relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../cctbx"), 'chiltbx': relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../chiltbx"), 'cma_es': relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../cma_es"), 'crys3d': relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../crys3d"), 'dxtbx': relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../dxtbx"), 'fable': relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../fable"), 'gltbx': relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../gltbx"), 'iotbx': relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx"), 'libtbx': relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx"), 'mmtbx': relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx"), 'omptbx': relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../omptbx"), 'rstbx': relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../rstbx"), 'scitbx': relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../scitbx"), 'serialtbx': relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../serialtbx"), 'smtbx': relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../smtbx"), 'spotfinder': relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../spotfinder"), 'tbxx': relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../tbxx"), 'ucif': relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../ucif"), 'wxtbx': relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../wxtbx")}, 'module_list': [, , , , , , , , , , , , , , , , , , , , , , ], 'no_bin_python': False, 'path_utility': relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/path_utility.py"), 'python_exe': relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), 'python_version_major_minor': (3, 12), 'pythonpath': [relocatable_path(anchor="/<>/.pybuild/cpython3_3.12/build_", relocatable="../../../dxtbx/src"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../.."), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../dxtbx/src"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../boost_adaptbx"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="lib"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/lib/python3.12/dist-packages"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/lib/python3/dist-packages"), relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/local/lib/python3.12/dist-packages")], 'relocatable': True, 'repository_paths': [relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../..")], 'scons_dist_path': relocatable_path(anchor="/<>/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr")} Saved /<>/debian/tmp/usr/lib/cctbx/python3.12/libtbx_env env {'_dispatcher_include_at_start': [], '_dispatcher_include_before_command': [], '_dispatcher_precall_commands': None, '_dispatcher_registry': {relocatable_path(anchor="/usr", relocatable="bin/rstbx.simage.solver"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/rstbx/command_line/simage.solver.py"), relocatable_path(anchor="/usr", relocatable="bin/distl.image_viewer"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/spotfinder/command_line/image_viewer.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.image_viewer"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/rstbx/command_line/slip_viewer.py"), relocatable_path(anchor="/usr", relocatable="bin/wxtbx.xtriage"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/xtriage.py"), relocatable_path(anchor="/usr", relocatable="bin/wxtbx.plan_sad_experiment"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/plan_sad_experiment.py"), relocatable_path(anchor="/usr", relocatable="bin/rstbx.simage.create"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/rstbx/command_line/simage.create.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.loggraph"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/loggraph.py"), relocatable_path(anchor="/usr", relocatable="bin/rstbx.simage.explore_completeness"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/rstbx/command_line/simage.explore_completeness.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.plot_anomalous_scattering"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/plot_anomalous_scattering.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.image_viewer"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/rstbx/command_line/viewer.py"), relocatable_path(anchor="/usr", relocatable="bin/distl.thin_client"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/spotfinder/command_line/thin_client.py"), relocatable_path(anchor="/usr", relocatable="bin/dxtbx.install_format"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/install_format.py"), relocatable_path(anchor="/usr", relocatable="bin/distl.find_active_area"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/spotfinder/command_line/find_active_area.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.pdb_statistics"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/pdb_statistics.py"), relocatable_path(anchor="/usr", relocatable="bin/rstbx.simage.wx_display"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/rstbx/command_line/simage.wx_display.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.wxpython"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/wxpython.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.xtriage_gui"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/xtriage.py"), relocatable_path(anchor="/usr", relocatable="bin/wxtbx.inspect_r_free_flags"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/inspect_r_free_flags.py"), relocatable_path(anchor="/usr", relocatable="bin/wxtbx.anomalous_differences_histogram"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/anomalous_differences_histogram.py"), relocatable_path(anchor="/usr", relocatable="bin/dxtbx.depends_on"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/depends_on.py"), relocatable_path(anchor="/usr", relocatable="bin/dev.dxtbx.debug_memory"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/debug_memory.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.pdb_editor"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/pdb_editor.py"), relocatable_path(anchor="/usr", relocatable="bin/dxtbx.show_registry"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/show_registry.py"), relocatable_path(anchor="/usr", relocatable="bin/wxtbx.show_file_info"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/show_file_info.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.bfactor_plot"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/b_plot.py"), relocatable_path(anchor="/usr", relocatable="bin/distl.sweep_strength"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/spotfinder/command_line/sweep_strength.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.fix_rama_outliers"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/fix_rama_outliers.py"), relocatable_path(anchor="/usr", relocatable="bin/distl.mp_spotfinder_server_read_file"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/spotfinder/command_line/mp_spotfinder_server_read_file.py"), relocatable_path(anchor="/usr", relocatable="bin/distl.signal_strength"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/spotfinder/command_line/signal_strength.py"), relocatable_path(anchor="/usr", relocatable="bin/rstbx.index"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/rstbx/command_line/index.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.example_viewer"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/rstbx/command_line/example_viewer.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.validate_ligands"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/validate_ligands.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.fmodel_simple"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/fmodel_simple.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.perigee"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/perigee.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.sort_hetatms"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/sort_hetatms.py"), relocatable_path(anchor="/usr", relocatable="bin/molprobity.omegalyze"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/omegalyze.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.omegalyze"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/omegalyze.py"), relocatable_path(anchor="/usr", relocatable="bin/molprobity.clashscore"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/clashscore.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.clashscore"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/clashscore.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.mon_lib_cif_triage"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/mon_lib_cif_triage.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.strip_model"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/strip_model.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.map_to_model_histogram"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/map_to_model_histogram.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.plan_sad_experiment"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/plan_sad_experiment.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.reciprocal_space_arrays"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/reciprocal_space_arrays.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.altloc_remediate"): relocatable_path(anchor="/usr", 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relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/dxtbx.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/smtbx.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/crys3d.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/ccp4io.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/cbflib.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/annlib.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/scitbx.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/fable.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/cma_es.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/omptbx.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/boost.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/wxtbx.show_build_path"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/usr", relocatable="bin/serialtbx.show_build_path"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/usr", relocatable="bin/rstbx.show_build_path"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.python"): relocatable_path(anchor="/usr", relocatable="bin/python3.12"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.prime_factors_of"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/prime_factors_of.py"), relocatable_path(anchor="/usr", relocatable="bin/smtbx.anom_refine"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/smtbx/command_line/anom_refine.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.HKLinfo"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/crys3d/command_line/HKLinfo.py"), relocatable_path(anchor="/usr", relocatable="bin/smtbx.refine"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/smtbx/command_line/refine.py"), relocatable_path(anchor="/usr", relocatable="bin/smtbx.absolute_structure"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/smtbx/command_line/absolute_structure.py"), relocatable_path(anchor="/usr", relocatable="bin/smtbx.masks"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/smtbx/command_line/masks.py"), relocatable_path(anchor="/usr", relocatable="bin/smtbx.benchmark_refinement"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/smtbx/command_line/benchmark_refinement.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.fmodel"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/fmodel.py")}, 'bin_path': relocatable_path(anchor="/usr", relocatable="bin"), 'boost_version': 108300, 'build_options': , 'build_path': absolute_path("/usr/lib/cctbx/python3.12"), 'command_line_redirections': {}, 'command_version_suffix': None, 'dispatcher_name': None, 'exe_path': relocatable_path(anchor="/usr", relocatable="bin"), 'explicitly_requested_modules': {'annlib', 'annlib_adaptbx', 'boost_adaptbx', 'cbflib_adaptbx', 'ccp4io', 'ccp4io_adaptbx', 'cctbx', 'cma_es', 'crys3d', 'dxtbx', 'fable', 'gltbx', 'iotbx', 'libtbx', 'mmtbx', 'omptbx', 'rstbx', 'scitbx', 'serialtbx', 'smtbx', 'spotfinder', 'tbxx', 'wxtbx'}, 'full_testing': False, 'include_path': relocatable_path(anchor="/usr", relocatable="include"), 'installed': True, 'installed_modules': [], 'installed_order': [], 'lib_path': relocatable_path(anchor="/usr", relocatable="lib"), 'missing_for_build': set(), 'missing_for_use': set(), 'missing_optional': {'king', 'probe', 'cbflib', 'reduce', 'docutils'}, 'module_dict': {'annlib': , 'boost': , 'cbflib': , 'ccp4io': , 'cctbx': , 'chiltbx': , 'cma_es': , 'crys3d': , 'dxtbx': , 'fable': , 'gltbx': , 'iotbx': , 'libtbx': , 'mmtbx': , 'omptbx': , 'rstbx': , 'scitbx': , 'serialtbx': , 'smtbx': , 'spotfinder': , 'tbxx': , 'ucif': , 'wxtbx': }, 'module_dist_paths': {'annlib': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/annlib"), 'annlib_adaptbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/annlib_adaptbx"), 'boost': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/boost"), 'boost_adaptbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/boost_adaptbx"), 'cbflib_adaptbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/cbflib_adaptbx"), 'ccp4io': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/ccp4io"), 'ccp4io_adaptbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/ccp4io_adaptbx"), 'cctbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/cctbx"), 'chiltbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/chiltbx"), 'cma_es': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/cma_es"), 'crys3d': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/crys3d"), 'dxtbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx"), 'fable': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/fable"), 'gltbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/gltbx"), 'iotbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx"), 'libtbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx"), 'mmtbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx"), 'omptbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/omptbx"), 'rstbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/rstbx"), 'scitbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/scitbx"), 'serialtbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/serialtbx"), 'smtbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/smtbx"), 'spotfinder': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/spotfinder"), 'tbxx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/tbxx"), 'ucif': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/ucif"), 'wxtbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx")}, 'module_list': [, , , , , , , , , , , , , , , , , , , , , , ], 'no_bin_python': True, 'path_utility': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/path_utility.py"), 'python_exe': relocatable_path(anchor="/usr", relocatable="bin/python3.12"), 'python_version_major_minor': (3, 12), 'pythonpath': [], 'relocatable': True, 'repository_paths': [relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages")], 'scons_dist_path': relocatable_path(anchor="/usr", relocatable=".")} building file list ... done ./ boost_adaptbx/ boost_adaptbx/tests/ boost_adaptbx/tests/tst_optional_copy iotbx/ iotbx/pdb/ iotbx/pdb/hybrid_36_fem scitbx/ scitbx/array_family/ scitbx/array_family/tst_accessors scitbx/array_family/tst_af_1 scitbx/array_family/tst_af_2 scitbx/array_family/tst_af_3 scitbx/array_family/tst_af_4 scitbx/array_family/tst_af_5 scitbx/array_family/tst_mat3 scitbx/array_family/tst_optional_copy scitbx/array_family/tst_rectangular_full_packed scitbx/array_family/tst_ref_matrix_facet scitbx/array_family/tst_sym_mat3 scitbx/array_family/tst_unsigned_float_arithmetic scitbx/array_family/tst_vec3 scitbx/error/ scitbx/error/tst_error scitbx/lbfgs/ scitbx/lbfgs/tst_lbfgs scitbx/math/ scitbx/math/tests/ scitbx/math/tests/tst scitbx/matrix/ scitbx/matrix/tests/ scitbx/matrix/tests/tst_cholesky scitbx/matrix/tests/tst_givens scitbx/matrix/tests/tst_householder scitbx/matrix/tests/tst_svd scitbx/serialization/ scitbx/serialization/tst_base_256 smtbx/ smtbx/refinement/ smtbx/refinement/constraints/ smtbx/refinement/constraints/tests/ smtbx/refinement/constraints/tests/tst_geometrical_hydrogens smtbx/refinement/constraints/tests/tst_reparametrisation smtbx/refinement/constraints/tests/tst_special_position sent 15,752,294 bytes received 568 bytes 31,505,724.00 bytes/sec total size is 15,740,680 speedup is 1.00 building file list ... done ./ libann_adaptor.so -> libann_adaptor.so.0.0.1 libann_adaptor.so.0 -> libann_adaptor.so.0.0.1 libann_adaptor.so.0.0.1 libasymmetric_map.so -> libasymmetric_map.so.0.0.1 libasymmetric_map.so.0 -> libasymmetric_map.so.0.0.1 libasymmetric_map.so.0.0.1 libcbf-private.so -> libcbf-private.so.0.0.1 libcbf-private.so.0 -> libcbf-private.so.0.0.1 libcbf-private.so.0.0.1 libccp4io.so -> libccp4io.so.0.0.1 libccp4io.so.0 -> libccp4io.so.0.0.1 libccp4io.so.0.0.1 libcctbx.so -> libcctbx.so.0.0.1 libcctbx.so.0 -> libcctbx.so.0.0.1 libcctbx.so.0.0.1 libcctbx_sgtbx_asu.so -> libcctbx_sgtbx_asu.so.0.0.1 libcctbx_sgtbx_asu.so.0 -> libcctbx_sgtbx_asu.so.0.0.1 libcctbx_sgtbx_asu.so.0.0.1 libdxtbxspotfinder.so -> libdxtbxspotfinder.so.0.0.1 libdxtbxspotfinder.so.0 -> libdxtbxspotfinder.so.0.0.1 libdxtbxspotfinder.so.0.0.1 libiotbx_mtz.so -> libiotbx_mtz.so.0.0.1 libiotbx_mtz.so.0 -> libiotbx_mtz.so.0.0.1 libiotbx_mtz.so.0.0.1 libiotbx_pdb.so -> libiotbx_pdb.so.0.0.1 libiotbx_pdb.so.0 -> libiotbx_pdb.so.0.0.1 libiotbx_pdb.so.0.0.1 libiotbx_xplor.so -> libiotbx_xplor.so.0.0.1 libiotbx_xplor.so.0 -> libiotbx_xplor.so.0.0.1 libiotbx_xplor.so.0.0.1 libmmtbx_masks.so -> libmmtbx_masks.so.0.0.1 libmmtbx_masks.so.0 -> libmmtbx_masks.so.0.0.1 libmmtbx_masks.so.0.0.1 libmmtbx_tls.so -> libmmtbx_tls.so.0.0.1 libmmtbx_tls.so.0 -> libmmtbx_tls.so.0.0.1 libmmtbx_tls.so.0.0.1 libomptbx.so -> libomptbx.so.0.0.1 libomptbx.so.0 -> libomptbx.so.0.0.1 libomptbx.so.0.0.1 librstbx.so -> librstbx.so.0.0.1 librstbx.so.0 -> librstbx.so.0.0.1 librstbx.so.0.0.1 libscitbx_boost_python.so -> libscitbx_boost_python.so.0.0.1 libscitbx_boost_python.so.0 -> libscitbx_boost_python.so.0.0.1 libscitbx_boost_python.so.0.0.1 libscitbx_minpack.so -> libscitbx_minpack.so.0.0.1 libscitbx_minpack.so.0 -> libscitbx_minpack.so.0.0.1 libscitbx_minpack.so.0.0.1 libscitbx_slatec.so -> libscitbx_slatec.so.0.0.1 libscitbx_slatec.so.0 -> libscitbx_slatec.so.0.0.1 libscitbx_slatec.so.0.0.1 libsmtbx_refinement_constraints.so -> libsmtbx_refinement_constraints.so.0.0.1 libsmtbx_refinement_constraints.so.0 -> libsmtbx_refinement_constraints.so.0.0.1 libsmtbx_refinement_constraints.so.0.0.1 libspotfinder.so -> libspotfinder.so.0.0.1 libspotfinder.so.0 -> libspotfinder.so.0.0.1 libspotfinder.so.0.0.1 sent 51,475,573 bytes received 494 bytes 102,952,134.00 bytes/sec total size is 51,460,074 speedup is 1.00 building file list ... done annlib_adaptbx/ annlib_adaptbx/ann_adaptor.h sent 2,226 bytes received 38 bytes 4,528.00 bytes/sec total size is 2,068 speedup is 0.91 building file list ... done boost_adaptbx/ boost_adaptbx/boost_range_python.hpp boost_adaptbx/convertible.h boost_adaptbx/exporting.hpp boost_adaptbx/floating_point_exceptions.h boost_adaptbx/hash.h boost_adaptbx/iterator_range.h boost_adaptbx/optional_conversions.h boost_adaptbx/precompiled.h boost_adaptbx/python_streambuf.h boost_adaptbx/std_pair_conversion.h boost_adaptbx/std_pair_fwd.h boost_adaptbx/swig_arg.hpp boost_adaptbx/tuple_conversion.h boost_adaptbx/graph/ boost_adaptbx/graph/graph_export_adaptor.hpp boost_adaptbx/graph/graph_type.hpp boost_adaptbx/graph/maximum_clique_greedy.hpp boost_adaptbx/graph/maximum_clique_rascal.hpp boost_adaptbx/graph/vertex_map.hpp boost_adaptbx/tests/ boost_adaptbx/tests/tst_optional_copy.h sent 73,868 bytes received 386 bytes 148,508.00 bytes/sec total size is 72,301 speedup is 0.97 building file list ... done cbflib_adaptbx/ cbflib_adaptbx/detectors/ cbflib_adaptbx/detectors/basic.h cbflib_adaptbx/detectors/buffer_based_service.h cbflib_adaptbx/detectors/cbf_adaptor.h cbflib_adaptbx/detectors/cbf_byte_offset_optimized.h cbflib_adaptbx/detectors/mar_adaptor.h cbflib_adaptbx/detectors/boost_python/ cbflib_adaptbx/detectors/boost_python/cbf_binary_adaptor.h cbflib_adaptbx/detectors/boost_python/general_cbf_write.h sent 22,323 bytes received 158 bytes 44,962.00 bytes/sec total size is 21,656 speedup is 0.96 building file list ... done ccp4io_adaptbx/ ccp4io_adaptbx/ccp4_ccplib_fem.hpp ccp4io_adaptbx/ccp4_diskio_fem.hpp ccp4io_adaptbx/ccp4_fftlib_fem.hpp ccp4io_adaptbx/ccp4_library_fem.hpp ccp4io_adaptbx/ccp4_maplib_fem.hpp ccp4io_adaptbx/ccp4_mtzlib_fem.hpp ccp4io_adaptbx/ccp4_other_fem.hpp ccp4io_adaptbx/ccp4_parser_f.h ccp4io_adaptbx/ccp4_parser_fem.hpp ccp4io_adaptbx/ccp4_symlib_fem.hpp ccp4io_adaptbx/cmaplib_f.h ccp4io_adaptbx/cmtzlib_f.h ccp4io_adaptbx/csymlib_f.h ccp4io_adaptbx/library_f.h ccp4io_adaptbx/printf_wrappers.h ccp4io_adaptbx/dev/ ccp4io_adaptbx/dev/fftlib.hpp sent 87,977 bytes received 326 bytes 176,606.00 bytes/sec total size is 86,683 speedup is 0.98 building file list ... done cctbx/ cctbx/adptbx.h cctbx/anharmonic.h cctbx/coordinates.h cctbx/crystal_orientation.h cctbx/cumulative_intensity_distribution.h cctbx/error.h cctbx/french_wilson.h cctbx/hendrickson_lattman.h cctbx/import_scitbx_af.h cctbx/miller.h cctbx/restraints.h cctbx/tagged_value.h cctbx/uctbx.h cctbx/adp_restraints/ cctbx/adp_restraints/adp_restraints.h cctbx/adp_restraints/adp_similarity.h cctbx/adp_restraints/aniso_restraints.h cctbx/adp_restraints/fixed_u_eq_adp.h cctbx/adp_restraints/isotropic_adp.h cctbx/adp_restraints/rigid_bond.h cctbx/adp_restraints/rigu.h cctbx/adptbx/ cctbx/adptbx/hirshfeld.h cctbx/covariance/ cctbx/covariance/covariance.h cctbx/crystal/ cctbx/crystal/asu_clusters.h cctbx/crystal/close_packing.h cctbx/crystal/coordination_sequences.h cctbx/crystal/direct_space_asu.h cctbx/crystal/incremental_pairs.h cctbx/crystal/namespace.h cctbx/crystal/neighbors_fast.h cctbx/crystal/neighbors_simple.h cctbx/crystal/pair_tables.h cctbx/crystal/site_cluster_analysis.h cctbx/crystal/symmetry.h cctbx/crystal/workarounds_bpl.h cctbx/dmtbx/ cctbx/dmtbx/triplet_generator.h cctbx/dmtbx/triplet_phase_relation.h cctbx/eltbx/ cctbx/eltbx/attenuation_coefficient.h cctbx/eltbx/basic.h cctbx/eltbx/chemical_elements.h cctbx/eltbx/covalent_radii.h cctbx/eltbx/electron_scattering.h cctbx/eltbx/fp_fdp.h cctbx/eltbx/henke.h cctbx/eltbx/icsd_radii.h cctbx/eltbx/neutron.h cctbx/eltbx/sasaki.h cctbx/eltbx/tiny_pse.h cctbx/eltbx/wavelengths.h cctbx/eltbx/xray_scattering.h cctbx/eltbx/xray_scattering/ cctbx/eltbx/xray_scattering/form_factor.h cctbx/eltbx/xray_scattering/gaussian.h cctbx/eltbx/xray_scattering/n_gaussian.h cctbx/eltbx/xray_scattering/n_gaussian_raw.h cctbx/examples/ cctbx/examples/merging/ cctbx/examples/merging/postrefine_base.h cctbx/examples/merging/xscale_prototype_core.h cctbx/geometry/ cctbx/geometry/geometry.h cctbx/geometry_restraints/ cctbx/geometry_restraints/angle.h cctbx/geometry_restraints/asu_cache.h cctbx/geometry_restraints/bond.h cctbx/geometry_restraints/bond_misc.h cctbx/geometry_restraints/bond_similarity.h cctbx/geometry_restraints/bond_sorted.h cctbx/geometry_restraints/chirality.h cctbx/geometry_restraints/dihedral.h cctbx/geometry_restraints/motif.h cctbx/geometry_restraints/namespace.h cctbx/geometry_restraints/nonbonded.h cctbx/geometry_restraints/nonbonded_sorted.h cctbx/geometry_restraints/parallelity.h cctbx/geometry_restraints/planarity.h cctbx/geometry_restraints/proxy_select.h cctbx/geometry_restraints/shared_wrapper_pickle.hpp cctbx/geometry_restraints/sorted_asu_proxies.h cctbx/geometry_restraints/utils.h cctbx/maptbx/ cctbx/maptbx/asymmetric_map.h cctbx/maptbx/average_densities.h cctbx/maptbx/connectivity.h cctbx/maptbx/coordinate_transformers.h cctbx/maptbx/copy.h cctbx/maptbx/fft.h cctbx/maptbx/fsc.h cctbx/maptbx/ft_analytical_1d_point_scatterer_at_origin.h cctbx/maptbx/grid_indices_around_sites.h cctbx/maptbx/grid_tags.h cctbx/maptbx/gridding.h cctbx/maptbx/histogram.h cctbx/maptbx/interpolation.h cctbx/maptbx/loft.h cctbx/maptbx/map_accumulator.h cctbx/maptbx/marked_grid_points.h cctbx/maptbx/mask.h cctbx/maptbx/mask_utils.h cctbx/maptbx/namespace.h cctbx/maptbx/peak_search.h cctbx/maptbx/resolution.h cctbx/maptbx/skeletons.h cctbx/maptbx/sphericity.h cctbx/maptbx/standard_deviations_around_sites.hpp cctbx/maptbx/statistics.h cctbx/maptbx/structure_factors.h cctbx/maptbx/target_and_gradients.h cctbx/maptbx/utils.h cctbx/maptbx/accessors/ cctbx/maptbx/accessors/c_grid_p1.h cctbx/maptbx/accessors/c_grid_padded_p1.h cctbx/maptbx/bcr/ cctbx/maptbx/bcr/bcr.h cctbx/masks/ cctbx/masks/around_atoms.h cctbx/masks/flood_fill.h cctbx/math/ cctbx/math/array_utils.h cctbx/math/cos_sin_table.h cctbx/math/loop_n_from_m.h cctbx/math/mod.h cctbx/miller/ cctbx/miller/amplitude_normalisation.h cctbx/miller/asu.h cctbx/miller/bins.h cctbx/miller/change_basis.h cctbx/miller/expand_to_p1.h cctbx/miller/f_calc_map.h cctbx/miller/index_generator.h cctbx/miller/index_span.h cctbx/miller/lookup_utils.h cctbx/miller/match.h cctbx/miller/match_bijvoet_mates.h cctbx/miller/match_indices.h cctbx/miller/match_multi_indices.h cctbx/miller/math.h cctbx/miller/merge_equivalents.h cctbx/miller/phase_integrator.h cctbx/miller/phase_transfer.h cctbx/miller/randomize_amplitude_and_phase.h cctbx/miller/slices.h cctbx/miller/sym_equiv.h cctbx/miller/union_of_indices.h cctbx/multipolar/ cctbx/multipolar/aspherical.h cctbx/sgtbx/ cctbx/sgtbx/basic.h cctbx/sgtbx/brick.h cctbx/sgtbx/change_of_basis_op.h cctbx/sgtbx/find_affine.h cctbx/sgtbx/group_codes.h cctbx/sgtbx/lattice_symmetry.h cctbx/sgtbx/lattice_tr.h cctbx/sgtbx/miller_ops.h cctbx/sgtbx/operator_from_axis_direction.h cctbx/sgtbx/parse_string.h cctbx/sgtbx/phase_info.h cctbx/sgtbx/reciprocal_space_asu.h cctbx/sgtbx/reciprocal_space_reference_asu.h cctbx/sgtbx/reference_settings.h cctbx/sgtbx/rot_mx.h cctbx/sgtbx/rot_mx_hash.h cctbx/sgtbx/rot_mx_info.h cctbx/sgtbx/rotation_matrices.h cctbx/sgtbx/row_echelon_solve.h cctbx/sgtbx/rt_mx.h cctbx/sgtbx/rt_mx_hash.h cctbx/sgtbx/search_symmetry.h cctbx/sgtbx/select_generators.h cctbx/sgtbx/seminvariant.h cctbx/sgtbx/site_constraints.h cctbx/sgtbx/site_symmetry.h cctbx/sgtbx/site_symmetry_table.h cctbx/sgtbx/smith_normal_form.h cctbx/sgtbx/space_group.h cctbx/sgtbx/space_group_hash.h cctbx/sgtbx/space_group_type.h cctbx/sgtbx/sym_equiv_sites.h cctbx/sgtbx/symbols.h cctbx/sgtbx/sys_abs_equiv.h cctbx/sgtbx/tensor_rank_2.h cctbx/sgtbx/tensors.h cctbx/sgtbx/tr_group.h cctbx/sgtbx/tr_group_hash.h cctbx/sgtbx/tr_vec.h cctbx/sgtbx/tr_vec_hash.h cctbx/sgtbx/utils.h cctbx/sgtbx/wyckoff.h cctbx/sgtbx/direct_space_asu/ cctbx/sgtbx/direct_space_asu/proto/ cctbx/sgtbx/direct_space_asu/proto/asymmetric_unit.h cctbx/sgtbx/direct_space_asu/proto/cut.h cctbx/sgtbx/direct_space_asu/proto/direct_space_asu.h cctbx/sgtbx/direct_space_asu/proto/expressions.h cctbx/sgtbx/direct_space_asu/proto/facet_collection.h cctbx/sgtbx/direct_space_asu/proto/reference_table.h cctbx/sgtbx/direct_space_asu/proto/shortcuts.h cctbx/sgtbx/direct_space_asu/proto/small_vec_math.h cctbx/symmetry_search/ cctbx/symmetry_search/translation_refinement.h cctbx/translation_search/ cctbx/translation_search/fast_nv1995.h cctbx/translation_search/fast_terms.h cctbx/translation_search/namespace.h cctbx/translation_search/symmetry_flags.h cctbx/translation_search/fast_nv1995/ cctbx/translation_search/fast_nv1995/combinations.h cctbx/translation_search/fast_nv1995/intermediates.h cctbx/translation_search/fast_nv1995/summations.h cctbx/uctbx/ cctbx/uctbx/fast_minimum_reduction.h cctbx/uctbx/determine_unit_cell/ cctbx/uctbx/determine_unit_cell/NCDist.h cctbx/xray/ cctbx/xray/conversions.h cctbx/xray/curvatures_simple.h cctbx/xray/each_hkl_gradients_direct.h cctbx/xray/extinction.h cctbx/xray/f_model.h cctbx/xray/fast_gradients.h cctbx/xray/gradient_flags.h cctbx/xray/gradients_direct.h cctbx/xray/grouped_data.h cctbx/xray/hr_ht_cache.h cctbx/xray/minimization.h cctbx/xray/observations.h cctbx/xray/packing_order.h cctbx/xray/parameter_map.h cctbx/xray/sampled_model_density.h cctbx/xray/sampling_base.h cctbx/xray/sampling_loop.h cctbx/xray/scatterer.h cctbx/xray/scatterer_flags.h cctbx/xray/scatterer_utils.h cctbx/xray/scattering_type_registry.h cctbx/xray/sigmaa.h cctbx/xray/structure_factors_direct.h cctbx/xray/structure_factors_simple.h cctbx/xray/targets.h cctbx/xray/twin_component.h cctbx/xray/twin_targets.h cctbx/xray/targets/ cctbx/xray/targets/common_results.h cctbx/xray/targets/correlation.h cctbx/xray/targets/least_squares.h cctbx/xray/targets/mlf.h cctbx/xray/targets/mlhl.h cctbx/xray/targets/mli.h cctbx/xray/targets/shelxl_wght_ls.hpp sent 1,904,379 bytes received 4,420 bytes 3,817,598.00 bytes/sec total size is 1,887,271 speedup is 0.99 building file list ... done cma_es/ cma_es/cma/ cma_es/cma/cmaes.h cma_es/cma/cmaes_interface.h sent 6,882 bytes received 60 bytes 13,884.00 bytes/sec total size is 6,671 speedup is 0.96 building file list ... done sent 199 bytes received 12 bytes 422.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done dxtbx/ dxtbx/error.h dxtbx/imageset.h dxtbx/array_family/ dxtbx/array_family/flex_table.h dxtbx/array_family/flex_table_suite.h dxtbx/array_family/ref_pickle_double_buffered.h dxtbx/boost_python/ dxtbx/boost_python/compression.h dxtbx/format/ dxtbx/format/image.h dxtbx/format/boost_python/ dxtbx/format/boost_python/cbf_read_buffer.h dxtbx/masking/ dxtbx/masking/goniometer_shadow_masking.h dxtbx/masking/masking.h dxtbx/model/ dxtbx/model/beam.h dxtbx/model/crystal.h dxtbx/model/detector.h dxtbx/model/experiment.h dxtbx/model/experiment_list.h dxtbx/model/goniometer.h dxtbx/model/kappa_goniometer.h dxtbx/model/model_helpers.h dxtbx/model/multi_axis_goniometer.h dxtbx/model/panel.h dxtbx/model/panel_data.h dxtbx/model/parallax_correction.h dxtbx/model/pixel_to_millimeter.h dxtbx/model/ray_intersection.h dxtbx/model/scan.h dxtbx/model/scan_helpers.h dxtbx/model/spectrum.h dxtbx/model/virtual_panel.h dxtbx/model/boost_python/ dxtbx/model/boost_python/pickle_suite.h dxtbx/model/boost_python/to_from_dict.h sent 379,933 bytes received 610 bytes 761,086.00 bytes/sec total size is 377,522 speedup is 0.99 building file list ... done ./ fem.hpp noexcept_false.hpp fem/ fem/arr.hpp fem/arr_and_str_indices.hpp fem/arr_ref.hpp fem/arr_size.hpp fem/close_chain.hpp fem/common.hpp fem/data.hpp fem/data_of_type.hpp fem/data_type_star.hpp fem/dimension.hpp fem/do.hpp fem/error_utils.hpp fem/file_positioning_chain.hpp fem/format.hpp fem/inquire_chain.hpp fem/intrinsics.hpp fem/intrinsics_extra.hpp fem/io.hpp fem/io_exceptions.hpp fem/main.hpp fem/major_types.hpp fem/open_chain.hpp fem/read.hpp fem/size_t.hpp fem/star.hpp fem/stop.hpp fem/str.hpp fem/str_arr_ref.hpp fem/str_ref.hpp fem/variant.hpp fem/write.hpp fem/zero.hpp fem/utils/ fem/utils/char.hpp fem/utils/double_to_string.hpp fem/utils/equivalence.hpp fem/utils/int_types.hpp fem/utils/misc.hpp fem/utils/path.hpp fem/utils/random.hpp fem/utils/real_as_string.hpp fem/utils/simple_streams.hpp fem/utils/string.hpp fem/utils/string_to_double.hpp fem/utils/string_to_double_fmt.hpp fem/utils/token.hpp sent 204,012 bytes received 918 bytes 409,860.00 bytes/sec total size is 200,764 speedup is 0.98 building file list ... done gltbx/ gltbx/error.h gltbx/error_utils.h gltbx/fonts_ucs.h gltbx/glext.h gltbx/include_opengl.h gltbx/pointer_args_bpl.h gltbx/quadrics.h gltbx/special_wrapper_support.h gltbx/util.h sent 598,804 bytes received 190 bytes 1,197,988.00 bytes/sec total size is 597,954 speedup is 1.00 building file list ... done iotbx/ iotbx/error.h iotbx/detectors/ iotbx/detectors/bruker.h iotbx/detectors/display.h iotbx/detectors/image_divider.h iotbx/detectors/scanbox.h iotbx/detectors/context/ iotbx/detectors/context/spot_xy_convention.h iotbx/dsn6/ iotbx/dsn6/dsn6.hpp iotbx/mtz/ iotbx/mtz/batch.h iotbx/mtz/column.h iotbx/mtz/crystal.h iotbx/mtz/dataset.h iotbx/mtz/object.h iotbx/pdb/ iotbx/pdb/common_residue_names.h iotbx/pdb/hierarchy.h iotbx/pdb/hierarchy_atoms.h iotbx/pdb/hierarchy_bpl.h iotbx/pdb/hybrid_36_c.h iotbx/pdb/hybrid_36_cpp.h iotbx/pdb/input.h iotbx/pdb/modified_aa_names.h iotbx/pdb/modified_rna_dna_names.h iotbx/pdb/namespace.h iotbx/pdb/rna_dna_atom_names.h iotbx/pdb/small_str.h iotbx/pdb/utils.h iotbx/pdb/write_utils.h iotbx/pdb/write_utils_bpl.h iotbx/pdb/xray_structure.h iotbx/shelx/ iotbx/shelx/hklf.h iotbx/xplor/ iotbx/xplor/map_reader.h iotbx/xplor/map_writer.h sent 269,551 bytes received 629 bytes 540,360.00 bytes/sec total size is 266,716 speedup is 0.99 building file list ... done sent 465 bytes received 12 bytes 954.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done mmtbx/ mmtbx/error.h mmtbx/import_scitbx_af.h mmtbx/alignment/ mmtbx/alignment/align.h mmtbx/alignment/alignment.h mmtbx/alignment/tables.h mmtbx/building/ mmtbx/building/loop_closure/ mmtbx/building/loop_closure/ccd.h mmtbx/bulk_solvent/ mmtbx/bulk_solvent/bulk_solvent.h mmtbx/bulk_solvent/mosaic.h mmtbx/cablam/ mmtbx/cablam/cablam_align_utils.h mmtbx/den/ mmtbx/den/den.h mmtbx/dynamics/ mmtbx/dynamics/dynamics.h mmtbx/f_model/ mmtbx/f_model/f_model.h mmtbx/geometry/ mmtbx/geometry/asa.hpp mmtbx/geometry/calculator.hpp mmtbx/geometry/clash.hpp mmtbx/geometry/containment.hpp mmtbx/geometry/flattening.hpp mmtbx/geometry/indexing.hpp mmtbx/geometry/overlap.hpp mmtbx/geometry/primitive.hpp mmtbx/geometry/sphere_surface_sampling.hpp mmtbx/geometry/boost_python/ mmtbx/geometry/boost_python/containment.hpp mmtbx/geometry/boost_python/indexing.hpp mmtbx/geometry_restraints/ mmtbx/geometry_restraints/ramachandran.h mmtbx/geometry_restraints/reference_coordinate.h mmtbx/hydrogens/ mmtbx/hydrogens/hydrogens.h mmtbx/masks/ mmtbx/masks/atom_mask.h mmtbx/masks/grid_symop.h mmtbx/masks/util.h mmtbx/max_lik/ mmtbx/max_lik/max_lik.h mmtbx/max_lik/solvent_distribution_nco_09may2005.h mmtbx/max_lik/solvent_distribution_nco_09may2005_short.h mmtbx/max_lik/solvent_distribution_nco_09may2005_short_uniform.h mmtbx/max_lik/solvent_distribution_nco_14mar2005.h mmtbx/max_lik/solvent_distribution_nco_14mar2005_mod.h mmtbx/max_lik/solvent_distribution_nco_14mar2005_short.h mmtbx/max_lik/wat_dist_r_0_1.h mmtbx/max_lik/wat_dist_r_2p0_2p5.h mmtbx/ncs/ mmtbx/ncs/cartesian_restraints.h mmtbx/ncs/tncs.h mmtbx/pair_interaction/ mmtbx/pair_interaction/interaction.h mmtbx/probe/ mmtbx/probe/Common.h mmtbx/probe/DotSpheres.h mmtbx/probe/Scoring.h mmtbx/probe/SpatialQuery.h mmtbx/reduce/ mmtbx/reduce/InteractionGraph.h mmtbx/reduce/Optimizers.h mmtbx/reduce/PositionReturn.h mmtbx/rotamer/ mmtbx/rotamer/fit.h mmtbx/rsr/ mmtbx/rsr/rsr.h mmtbx/scaling/ mmtbx/scaling/absolute_scaling.h mmtbx/scaling/outlier.h mmtbx/scaling/relative_scaling.h mmtbx/scaling/scaling.h mmtbx/scaling/twinning.h mmtbx/secondary_structure/ mmtbx/secondary_structure/dssp.hpp mmtbx/secondary_structure/identify.hpp mmtbx/tls/ mmtbx/tls/decompose.h mmtbx/tls/optimise_amplitudes.h mmtbx/tls/tls.h mmtbx/tls/utils.h mmtbx/utils/ mmtbx/utils/utils.h mmtbx/validation/ mmtbx/validation/ramachandran/ mmtbx/validation/ramachandran/rama8000_tables.h mmtbx/validation/ramachandran/rama_eval.h sent 2,050,672 bytes received 1,313 bytes 4,103,970.00 bytes/sec total size is 2,044,213 speedup is 1.00 building file list ... done omptbx/ omptbx/lock.h omptbx/omp_or_stubs.h omptbx/stubs.h sent 2,109 bytes received 76 bytes 4,370.00 bytes/sec total size is 1,850 speedup is 0.85 building file list ... done rstbx/ rstbx/backplane.h rstbx/import_scitbx_af.hpp rstbx/apps/ rstbx/apps/stills/ rstbx/apps/stills/simple_integration.h rstbx/bandpass/ rstbx/bandpass/parameters.h rstbx/bandpass/subpixel_joint_model.h rstbx/bpcx/ rstbx/bpcx/detector_model/ rstbx/bpcx/detector_model/sensor.h rstbx/diffraction/ rstbx/diffraction/ewald_sphere.h rstbx/diffraction/partial_spot_position_partial_H.h rstbx/diffraction/reflection_range.h rstbx/diffraction/fastbragg/ rstbx/diffraction/fastbragg/fastbragg.h rstbx/dps_core/ rstbx/dps_core/direction.h rstbx/dps_core/directional_fft.h rstbx/dps_core/dps_core.h rstbx/dps_core/spotclass.h rstbx/indexing_api/ rstbx/indexing_api/indexing_api.h rstbx/simage/ rstbx/simage/image_simple.hpp rstbx/simulation/ rstbx/simulation/sim_xfel1.h rstbx/symmetry/ rstbx/symmetry/constraints/ rstbx/symmetry/constraints/a_g_conversion.h sent 111,374 bytes received 400 bytes 223,548.00 bytes/sec total size is 109,476 speedup is 0.98 building file list ... done scitbx/ scitbx/auto_array.h scitbx/constants.h scitbx/cubicle_neighbors.hpp scitbx/cubicles.h scitbx/error.h scitbx/error_utils.h scitbx/histogram.h scitbx/indexed_value.h scitbx/iso_surface.h scitbx/lbfgs.h scitbx/lbfgsb.h scitbx/mat2.h scitbx/mat3.h scitbx/numerical.h scitbx/r3_utils.hpp scitbx/random.h scitbx/random_legacy_boost_1_63.h scitbx/rational.h scitbx/rotr3.h scitbx/sym_mat2.h scitbx/sym_mat3.h scitbx/type_holder.h scitbx/vec2.h scitbx/vec3.h scitbx/weighted_histogram.h scitbx/array_family/ scitbx/array_family/array_adaptor.h scitbx/array_family/block_iterator.h scitbx/array_family/counts.h scitbx/array_family/error.h scitbx/array_family/flex_types.h scitbx/array_family/initialiser.h scitbx/array_family/linear_interpolation.h scitbx/array_family/loops.h scitbx/array_family/memory.h scitbx/array_family/misc_functions.h scitbx/array_family/owning_ref.h scitbx/array_family/range.h scitbx/array_family/ref.h scitbx/array_family/ref_matrix.h scitbx/array_family/ref_reductions.h scitbx/array_family/selections.h scitbx/array_family/shared.h scitbx/array_family/shared_plain.h scitbx/array_family/simple_io.h scitbx/array_family/simple_tiny_io.h scitbx/array_family/slice.h scitbx/array_family/small.h scitbx/array_family/small_plain.h scitbx/array_family/sort.h scitbx/array_family/tiny.h scitbx/array_family/tiny_mat_ref.h scitbx/array_family/tiny_plain.h scitbx/array_family/tiny_types.h scitbx/array_family/type_traits.h scitbx/array_family/versa.h scitbx/array_family/versa_matrix.h scitbx/array_family/versa_plain.h scitbx/array_family/accessors/ scitbx/array_family/accessors/c_grid.h scitbx/array_family/accessors/c_grid_padded.h scitbx/array_family/accessors/c_grid_padded_periodic.h scitbx/array_family/accessors/c_grid_periodic.h scitbx/array_family/accessors/c_index_1d_calculator.h scitbx/array_family/accessors/c_interval_grid.h scitbx/array_family/accessors/f_grid.h scitbx/array_family/accessors/flex_grid.h scitbx/array_family/accessors/mat_grid.h scitbx/array_family/accessors/packed_matrix.h scitbx/array_family/accessors/rectangular_full_packed.h scitbx/array_family/accessors/row_and_column.h scitbx/array_family/accessors/striding.h scitbx/array_family/accessors/traits.h scitbx/array_family/accessors/trivial.h scitbx/array_family/boost_python/ scitbx/array_family/boost_python/byte_str.h scitbx/array_family/boost_python/c_grid_flex_conversions.h scitbx/array_family/boost_python/flex_helpers.h scitbx/array_family/boost_python/flex_pickle_double_buffered.h scitbx/array_family/boost_python/flex_pickle_single_buffered.h scitbx/array_family/boost_python/flex_wrapper.h scitbx/array_family/boost_python/flex_wrapper_complex.h scitbx/array_family/boost_python/numpy_bridge.hpp scitbx/array_family/boost_python/owning_ref_conversions.h scitbx/array_family/boost_python/packed_to_flex_conversions.h scitbx/array_family/boost_python/passing_flex_by_reference.h scitbx/array_family/boost_python/range_wrappers.h scitbx/array_family/boost_python/ref_flex_conversions.h scitbx/array_family/boost_python/ref_from_array.h scitbx/array_family/boost_python/ref_pickle_double_buffered.h scitbx/array_family/boost_python/selections_wrapper.h scitbx/array_family/boost_python/shared_flat_conversions.h scitbx/array_family/boost_python/shared_flex_conversions.h scitbx/array_family/boost_python/shared_wrapper.h scitbx/array_family/boost_python/utils.h scitbx/array_family/detail/ scitbx/array_family/detail/auto_allocator.h scitbx/array_family/detail/generic_array_functors.h scitbx/array_family/detail/generic_array_operators.h scitbx/array_family/detail/misc.h scitbx/array_family/detail/push_back_etc.h scitbx/array_family/detail/reducing_boolean_mem_fun.h scitbx/array_family/detail/ref_helpers.h scitbx/array_family/detail/tiny_helpers.h scitbx/boost_python/ scitbx/boost_python/array_as_list.h scitbx/boost_python/container_conversions.h scitbx/boost_python/cstringio_utils.h scitbx/boost_python/is_polymorphic_workaround.h scitbx/boost_python/iterator_range.hpp scitbx/boost_python/iterator_wrappers.h scitbx/boost_python/pair_as_tuple.hpp scitbx/boost_python/sequence_as_array.h scitbx/boost_python/slice.h scitbx/boost_python/stl_map_as_dict.h scitbx/boost_python/utils.h scitbx/examples/ scitbx/examples/bevington/ scitbx/examples/bevington/prototype_core.h scitbx/fftpack/ scitbx/fftpack/complex_to_complex.h scitbx/fftpack/complex_to_complex_2d.h scitbx/fftpack/complex_to_complex_3d.h scitbx/fftpack/factorization.h scitbx/fftpack/gridding.h scitbx/fftpack/real_to_complex.h scitbx/fftpack/real_to_complex_3d.h scitbx/fftpack/detail/ scitbx/fftpack/detail/real_to_complex_backward.h scitbx/fftpack/detail/real_to_complex_forward.h scitbx/fftpack/detail/ref.h scitbx/glmtbx/ scitbx/glmtbx/family.h scitbx/glmtbx/glm.h scitbx/glmtbx/robust_glm.h scitbx/graphics_utils/ scitbx/graphics_utils/colors.h scitbx/lbfgs/ scitbx/lbfgs/drop_convergence_test.h scitbx/lbfgs/raw.h scitbx/lbfgs/raw_reference.h scitbx/lbfgsb/ scitbx/lbfgsb/fortran_interface.h scitbx/lbfgsb/raw.h scitbx/line_search/ scitbx/line_search/more_thuente_1994.h scitbx/line_search/more_thuente_1994_raw.h scitbx/lstbx/ scitbx/lstbx/normal_equations.h scitbx/math/ scitbx/math/2d_zernike_moments.h scitbx/math/accumulators.h scitbx/math/angle_derivative.h scitbx/math/approx_equal.h scitbx/math/atanh.h scitbx/math/basic_statistics.h scitbx/math/bessel.h scitbx/math/cartesian_product_fixed_size.hpp scitbx/math/chebyshev.h scitbx/math/compile_time.h scitbx/math/continued_fraction.h scitbx/math/copysign.h scitbx/math/cubic_equation.h scitbx/math/dihedral.h scitbx/math/distance_difference.h scitbx/math/distributions.h scitbx/math/eigensystem.h scitbx/math/erf.h scitbx/math/euler_angles.h scitbx/math/fast_approx_math.h scitbx/math/floating_point_epsilon.h scitbx/math/g_function.h scitbx/math/gamma.h scitbx/math/gaussian_fit_1d_analytical.h scitbx/math/gcd.h scitbx/math/golay.h scitbx/math/halton.h scitbx/math/icosahedron.h scitbx/math/imaginary.h scitbx/math/inertia_tensor.h scitbx/math/interpolation.h scitbx/math/jacks_expf.h scitbx/math/lambertw.h scitbx/math/least_squares_plane.h scitbx/math/linear_correlation.h scitbx/math/linear_interpolation.h scitbx/math/linear_regression.h scitbx/math/mean_and_variance.h scitbx/math/minimum_covering_sphere.h scitbx/math/modulo.h scitbx/math/namespace.h scitbx/math/numeric_limits.h scitbx/math/orthonormal_basis.h scitbx/math/parabolic_cylinder_d.h scitbx/math/phase_error.h scitbx/math/polygon_intersection.h scitbx/math/principal_axes_of_inertia.h scitbx/math/quadrature.h scitbx/math/r3_rotation.h scitbx/math/resample.h scitbx/math/rotate_around_axis.h scitbx/math/rotation.h scitbx/math/superpose.h scitbx/math/tetrahedron.h scitbx/math/traits.h scitbx/math/unimodular_generator.h scitbx/math/utils.h scitbx/math/weighted_covariance.h scitbx/math/zernike.h scitbx/math/zernike_moments.h scitbx/math/erf/ scitbx/math/erf/constants.h scitbx/math/erf/engine.h scitbx/math/gaussian/ scitbx/math/gaussian/fit.h scitbx/math/gaussian/namespace.h scitbx/math/gaussian/sum.h scitbx/math/gaussian/term.h scitbx/matrix/ scitbx/matrix/as_xyz.h scitbx/matrix/cholesky.h scitbx/matrix/delta_tensors.h scitbx/matrix/diagonal.h scitbx/matrix/eigensystem.h scitbx/matrix/givens.h scitbx/matrix/householder.h scitbx/matrix/inversion.h scitbx/matrix/lu_decomposition.h scitbx/matrix/matrix_vector_operations.h scitbx/matrix/move.h scitbx/matrix/multiply.h scitbx/matrix/norms.h scitbx/matrix/outer_product.h scitbx/matrix/packed.h scitbx/matrix/row_echelon.h scitbx/matrix/row_echelon_full_pivoting.h scitbx/matrix/row_echelon_full_pivoting_impl.h scitbx/matrix/row_echelon_full_pivoting_small.h scitbx/matrix/special_matrices.h scitbx/matrix/svd.h scitbx/matrix/symmetric_rank_1_update.h scitbx/matrix/tensor_rank_2.h scitbx/matrix/tensors.h scitbx/matrix/tests.h scitbx/matrix/transpose_multiply.h scitbx/matrix/triangular_systems.h scitbx/matrix/vector_operations.h scitbx/matrix/tests/ scitbx/matrix/tests/utils.h scitbx/minpack/ scitbx/minpack/levenberg_marquardt.h scitbx/minpack/raw.h scitbx/misc/ scitbx/misc/file_utils.h scitbx/misc/positive_getitem_index.h scitbx/misc/split_lines.h scitbx/random/ scitbx/random/mersenne_twister.h scitbx/random/variate_generator.h scitbx/random/boost_python/ scitbx/random/boost_python/random.h scitbx/rigid_body/ scitbx/rigid_body/array_packing.h scitbx/rigid_body/body_lib.h scitbx/rigid_body/body_t.h scitbx/rigid_body/featherstone.h scitbx/rigid_body/joint_lib.h scitbx/rigid_body/joint_t.h scitbx/rigid_body/matrix_helpers.h scitbx/rigid_body/namespace.h scitbx/rigid_body/spatial_lib.h scitbx/rigid_body/tardy.h scitbx/serialization/ scitbx/serialization/base_256.h scitbx/serialization/double_buffered.h scitbx/serialization/single_buffered.h scitbx/slatec/ scitbx/slatec/lib_c.h scitbx/slatec/lib_cpp.h scitbx/sparse/ scitbx/sparse/approx_equal.h scitbx/sparse/dfs.h scitbx/sparse/io.h scitbx/sparse/lu_factorization.h scitbx/sparse/matrix.h scitbx/sparse/operators.h scitbx/sparse/random.h scitbx/sparse/triangular.h scitbx/sparse/util.h scitbx/sparse/vector.h scitbx/sparse/boost_python/ scitbx/sparse/boost_python/vector.h scitbx/stl/ scitbx/stl/map_as_python_dict.h scitbx/stl/map_fwd.h scitbx/stl/map_wrapper.h scitbx/stl/set_wrapper.h scitbx/stl/vector_as_python_list.h scitbx/stl/vector_io.h scitbx/stl/vector_wrapper.h scitbx/suffixtree/ scitbx/suffixtree/builder.hpp scitbx/suffixtree/edge.hpp scitbx/suffixtree/exception.hpp scitbx/suffixtree/glyph.hpp scitbx/suffixtree/iterator.hpp scitbx/suffixtree/matching_statistics.hpp scitbx/suffixtree/tree.hpp scitbx/suffixtree/word.hpp scitbx/suffixtree/boost_python/ scitbx/suffixtree/boost_python/edge_exports.hpp scitbx/suffixtree/boost_python/iterator_wrapper.hpp scitbx/suffixtree/boost_python/object_extensions.hpp scitbx/suffixtree/boost_python/tree_exports.hpp scitbx/util/ scitbx/util/cpu_timer.h scitbx/wigner/ scitbx/wigner/wigner3j.h sent 1,905,262 bytes received 5,521 bytes 3,821,566.00 bytes/sec total size is 1,885,050 speedup is 0.99 building file list ... done sent 182 bytes received 12 bytes 388.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done smtbx/ smtbx/error.h smtbx/import_cctbx.h smtbx/import_scitbx_af.h smtbx/ab_initio/ smtbx/ab_initio/density_modification.h smtbx/refinement/ smtbx/refinement/import_cctbx_xray.h smtbx/refinement/least_squares.h smtbx/refinement/weighting_schemes.h smtbx/refinement/constraints/ smtbx/refinement/constraints/affine.h smtbx/refinement/constraints/direction.h smtbx/refinement/constraints/geometrical_hydrogens.h smtbx/refinement/constraints/occupancy.h smtbx/refinement/constraints/proxy.h smtbx/refinement/constraints/reparametrisation.h smtbx/refinement/constraints/rigid.h smtbx/refinement/constraints/same_group.h smtbx/refinement/constraints/scaled_adp.h smtbx/refinement/constraints/scatterer_parameters.h smtbx/refinement/constraints/shared.h smtbx/refinement/constraints/special_position.h smtbx/refinement/constraints/symmetry_equivalent.h smtbx/refinement/constraints/u_eq_dependent_u_iso.h smtbx/refinement/constraints/u_iso_dependent_u_iso.h smtbx/refinement/restraints/ smtbx/refinement/restraints/origin_fixing.h smtbx/structure_factors/ smtbx/structure_factors/direct/ smtbx/structure_factors/direct/standard_xray.h smtbx/structure_factors/direct/table_based.h sent 182,174 bytes received 512 bytes 365,372.00 bytes/sec total size is 179,686 speedup is 0.98 building file list ... done spotfinder/ spotfinder/applications/ spotfinder/applications/find_active_area.h spotfinder/core_toolbox/ spotfinder/core_toolbox/distl.h spotfinder/core_toolbox/hough.h spotfinder/core_toolbox/libdistl.h spotfinder/core_toolbox/spot_shapes.h spotfinder/core_toolbox/spot_types.h spotfinder/core_toolbox/spotfilter.h spotfinder/core_toolbox/boost_python/ spotfinder/core_toolbox/boost_python/singlemask.h spotfinder/dxtbx_toolbox/ spotfinder/dxtbx_toolbox/distl.h spotfinder/dxtbx_toolbox/libdistl.h sent 42,936 bytes received 221 bytes 86,314.00 bytes/sec total size is 41,966 speedup is 0.97 building file list ... done tbxx/ tbxx/alignment.h tbxx/error_utils.hpp tbxx/libc_backtrace.hpp tbxx/optional_copy.hpp tbxx/pretty_type_name.hpp tbxx/time_accu.hpp sent 12,026 bytes received 133 bytes 24,318.00 bytes/sec total size is 11,532 speedup is 0.95 building file list ... done sent 150 bytes received 12 bytes 324.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done ./ boost_adaptbx/ boost_adaptbx/type_id_eq.h cctbx/boost_python/ cctbx/boost_python/flex_fwd.h scitbx/ scitbx/lbfgs_fem.hpp scitbx/array_family/ scitbx/array_family/operator_traits_builtin.h scitbx/array_family/ref_algebra.h scitbx/array_family/ref_apply.h scitbx/array_family/shared_algebra.h scitbx/array_family/shared_apply.h scitbx/array_family/shared_plain_apply.h scitbx/array_family/shared_reductions.h scitbx/array_family/small_algebra.h scitbx/array_family/small_apply.h scitbx/array_family/small_plain_apply.h scitbx/array_family/small_reductions.h scitbx/array_family/tiny_algebra.h scitbx/array_family/tiny_apply.h scitbx/array_family/tiny_plain_apply.h scitbx/array_family/tiny_reductions.h scitbx/array_family/versa_algebra.h scitbx/array_family/versa_apply.h scitbx/array_family/versa_plain_apply.h scitbx/array_family/versa_reductions.h scitbx/array_family/boost_python/ scitbx/array_family/boost_python/flex_fwd.h scitbx/array_family/detail/ scitbx/array_family/detail/operator_functors.h scitbx/array_family/detail/std_imports.h smtbx/boost_python/ smtbx/boost_python/flex_fwd.h sent 347,290 bytes received 534 bytes 695,648.00 bytes/sec total size is 345,070 speedup is 0.99 building file list ... done sent 245 bytes received 12 bytes 514.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done boost_adaptbx/ boost_adaptbx/command_line/ sent 515 bytes received 22 bytes 1,074.00 bytes/sec total size is 6,883 speedup is 12.82 building file list ... done cbflib_adaptbx/ cbflib_adaptbx/command_line/ sent 224 bytes received 22 bytes 492.00 bytes/sec total size is 1,215 speedup is 4.94 building file list ... done sent 143 bytes received 12 bytes 310.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done cctbx/ cctbx/command_line/ cctbx/command_line/web.install.csh sent 3,041 bytes received 41 bytes 6,164.00 bytes/sec total size is 39,547 speedup is 12.83 building file list ... done sent 81 bytes received 12 bytes 186.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done crys3d/ crys3d/command_line/ sent 469 bytes received 22 bytes 982.00 bytes/sec total size is 31,515 speedup is 64.19 building file list ... done dxtbx/ dxtbx/command_line/ sent 859 bytes received 22 bytes 1,762.00 bytes/sec total size is 81,902 speedup is 92.96 building file list ... done fable/ fable/command_line/ sent 447 bytes received 22 bytes 938.00 bytes/sec total size is 15,542 speedup is 33.14 building file list ... done gltbx/ gltbx/command_line/ sent 175 bytes received 22 bytes 394.00 bytes/sec total size is 606 speedup is 3.08 building file list ... done iotbx/ iotbx/command_line/ sent 2,851 bytes received 22 bytes 5,746.00 bytes/sec total size is 217,626 speedup is 75.75 building file list ... done libtbx/ libtbx/command_line/ libtbx/command_line/bash.sh libtbx/command_line/bibtex.sh libtbx/command_line/bundle_as_selfx.csh libtbx/command_line/configure.bat libtbx/command_line/configure.sh libtbx/command_line/csh.sh libtbx/command_line/exec.sh libtbx/command_line/gdb.sh libtbx/command_line/latex.sh libtbx/command_line/pdflatex.sh libtbx/command_line/refresh.bat libtbx/command_line/refresh.sh libtbx/command_line/sh.sh libtbx/command_line/tcsh.sh libtbx/command_line/unpack_in_sources.csh libtbx/command_line/valgrind.sh sent 7,202 bytes received 329 bytes 15,062.00 bytes/sec total size is 156,446 speedup is 20.77 building file list ... done mmtbx/ mmtbx/command_line/ mmtbx/regression/ mmtbx/regression/command_line/ mmtbx/regression/command_line/tst_find_residue_in_pdb.py sent 5,710 bytes received 51 bytes 11,522.00 bytes/sec total size is 805,446 speedup is 139.81 building file list ... done sent 70 bytes received 12 bytes 164.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done rstbx/ rstbx/command_line/ sent 790 bytes received 22 bytes 1,624.00 bytes/sec total size is 11,108 speedup is 13.68 building file list ... done scitbx/ scitbx/command_line/ scitbx/command_line/apply_tapenade_hints.py scitbx/command_line/generate_error_h.py scitbx/command_line/histogram.py scitbx/command_line/show_exp_times.py scitbx/command_line/show_sizes.py scitbx/command_line/unicode_examples.py sent 11,716 bytes received 136 bytes 23,704.00 bytes/sec total size is 9,958 speedup is 0.84 building file list ... done sent 182 bytes received 12 bytes 388.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done smtbx/ smtbx/command_line/ sent 888 bytes received 22 bytes 1,820.00 bytes/sec total size is 37,436 speedup is 41.14 building file list ... done spotfinder/ spotfinder/command_line/ sent 522 bytes received 22 bytes 1,088.00 bytes/sec total size is 22,750 speedup is 41.82 building file list ... done sent 81 bytes received 12 bytes 186.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done wxtbx/ wxtbx/command_line/ sent 466 bytes received 22 bytes 976.00 bytes/sec total size is 16,078 speedup is 32.95 building file list ... done sent 245 bytes received 12 bytes 514.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done boost_adaptbx/graph/ boost_adaptbx/graph/tests/ boost_adaptbx/graph/tests/tst_graph.py boost_adaptbx/graph/tests/tst_graph_breadth_first_search.py boost_adaptbx/graph/tests/tst_graph_clustering_algorithm.py boost_adaptbx/graph/tests/tst_graph_connected_component_algorithm.py boost_adaptbx/graph/tests/tst_graph_graph_structure_comparison.py boost_adaptbx/graph/tests/tst_graph_maximum_clique.py boost_adaptbx/graph/tests/tst_graph_metric.py boost_adaptbx/graph/tests/tst_graph_min_cut_max_flow.py boost_adaptbx/graph/tests/tst_graph_minimum_cut_enumerate.py boost_adaptbx/graph/tests/tst_graph_utility.py boost_adaptbx/tests/ boost_adaptbx/tests/tst_boost_thread.py boost_adaptbx/tests/tst_char_array.py boost_adaptbx/tests/tst_deprecation_tools.py boost_adaptbx/tests/tst_libc_backtrace.py boost_adaptbx/tests/tst_optional.py boost_adaptbx/tests/tst_optional_copy.cpp boost_adaptbx/tests/tst_optional_copy.h boost_adaptbx/tests/tst_python_streambuf.py boost_adaptbx/tests/tst_rational.py boost_adaptbx/tests/tst_std_pair.py boost_adaptbx/tests/tst_stderr_stdout.py boost_adaptbx/tests/tst_stdin.py boost_adaptbx/tests/tst_stdout.py boost_adaptbx/tests/tst_string_representation.py boost_adaptbx/tests/tst_swig_args.py boost_adaptbx/tests/tst_tuple.py sent 91,641 bytes received 515 bytes 184,312.00 bytes/sec total size is 89,657 speedup is 0.97 building file list ... done cbflib_adaptbx/detectors/ cbflib_adaptbx/detectors/tst_memory.cpp sent 1,207 bytes received 34 bytes 2,482.00 bytes/sec total size is 967 speedup is 0.78 building file list ... done ccp4io_adaptbx/ ccp4io_adaptbx/dev/ ccp4io_adaptbx/dev/tst_fftlib.py sent 7,594 bytes received 44 bytes 15,276.00 bytes/sec total size is 9,205 speedup is 1.21 building file list ... done cctbx/adp_restraints/ cctbx/adptbx/ cctbx/adptbx/boost_python/ cctbx/adptbx/boost_python/tst_adptbx.py cctbx/adptbx/boost_python/tst_hirshfeld.py cctbx/array_family/ cctbx/array_family/boost_python/ cctbx/array_family/boost_python/tst_flex.py cctbx/covariance/ cctbx/covariance/tests/ cctbx/covariance/tests/tst_covariance.py cctbx/crystal/ cctbx/development/ cctbx/dispersion/ cctbx/dispersion/tests/ cctbx/dispersion/tests/tst_kramers_kronig.py cctbx/dispersion/tests/tst_kramers_kronig_helper.py cctbx/dispersion/tests/tst_kramers_kronig_optimize.py cctbx/dmtbx/ cctbx/dmtbx/boost_python/ cctbx/dmtbx/boost_python/tst_dmtbx.py cctbx/eltbx/ cctbx/eltbx/tests/ cctbx/eltbx/tests/tst_attenuation_coefficient.py cctbx/eltbx/tests/tst_chemical_elements.py cctbx/eltbx/tests/tst_covalent_radii.py cctbx/eltbx/tests/tst_formula.py cctbx/eltbx/tests/tst_henke.py cctbx/eltbx/tests/tst_icsd_radii.py cctbx/eltbx/tests/tst_neutron.py cctbx/eltbx/tests/tst_sasaki.py cctbx/eltbx/tests/tst_tiny_pse.py cctbx/eltbx/tests/tst_wavelengths.py cctbx/eltbx/tests/tst_xray_scattering.py cctbx/examples/ cctbx/examples/merging/ cctbx/geometry/ cctbx/geometry/tests/ cctbx/geometry/tests/tst_geometry.py cctbx/geometry_restraints/ cctbx/maptbx/ cctbx/maptbx/boost_python/ cctbx/maptbx/boost_python/tst_maptbx.py cctbx/masks/ cctbx/masks/tests/ cctbx/masks/tests/tst_flood_fill.py cctbx/math/ cctbx/math/boost_python/ cctbx/math/boost_python/tst_math.py cctbx/miller/ cctbx/miller/boost_python/ cctbx/miller/boost_python/tst_miller.py cctbx/multipolar/ cctbx/multipolar/regression/ cctbx/multipolar/regression/tst_multipolar.py cctbx/omz/ cctbx/omz/tst_cod.csh cctbx/regression/ cctbx/sgtbx/ cctbx/sgtbx/boost_python/ cctbx/sgtbx/boost_python/tst_N_fold_rot.py cctbx/sgtbx/boost_python/tst_sgtbx.py cctbx/sgtbx/direct_space_asu/ cctbx/sgtbx/direct_space_asu/proto/ cctbx/sgtbx/direct_space_asu/proto/tst_asu.cpp cctbx/symmetry_search/ cctbx/symmetry_search/tests/ cctbx/symmetry_search/tests/tst_from_map.py cctbx/symmetry_search/tests/tst_goodness_of_symmetry.py cctbx/translation_search/ cctbx/translation_search/boost_python/ cctbx/translation_search/boost_python/tst_translation_search.py cctbx/uctbx/ cctbx/uctbx/boost_python/ cctbx/uctbx/boost_python/tst_crystal_orientation.py cctbx/uctbx/boost_python/tst_uctbx.py cctbx/uctbx/lrl/ cctbx/uctbx/lrl/tst_match_lattices.py cctbx/xray/ cctbx/xray/boost_python/ cctbx/xray/boost_python/tst_f_model.py cctbx/xray/boost_python/tst_targets_fd.py cctbx/xray/boost_python/tst_xray.py cctbx/xray/observations/ cctbx/xray/targets/ sent 436,029 bytes received 879 bytes 873,816.00 bytes/sec total size is 2,034,432 speedup is 4.66 building file list ... done cma_es/ sent 108 bytes received 19 bytes 254.00 bytes/sec total size is 3,008 speedup is 23.69 building file list ... done crys3d/regression/ sent 361 bytes received 15 bytes 752.00 bytes/sec total size is 41,841 speedup is 111.28 building file list ... done sent 634 bytes received 12 bytes 1,292.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done fable/test/ fable/test/tst_command_line.py fable/test/tst_io.py fable/test/tst_separate_files.py fable/test/tst_show_calls.py sent 12,877 bytes received 91 bytes 25,936.00 bytes/sec total size is 151,847 speedup is 11.71 building file list ... done sent 208 bytes received 12 bytes 440.00 bytes/sec total size is 8,108 speedup is 36.85 building file list ... done iotbx/bioinformatics/ iotbx/bioinformatics/test/ iotbx/bioinformatics/test/tst_alignment_as_hsearch.py iotbx/bioinformatics/test/tst_ebi_wu_blast_xml.py iotbx/bioinformatics/test/tst_local_blast.py iotbx/bioinformatics/test/tst_ncbi_blast_xml.py iotbx/ccp4_map/ iotbx/ccp4_map/tst_input.map iotbx/cif/ iotbx/cif/tests/ iotbx/cif/tests/tst_citations.py iotbx/cif/tests/tst_cod.py iotbx/cif/tests/tst_geometry.py iotbx/cif/tests/tst_lex_parse_build.py iotbx/cif/tests/tst_model.py iotbx/cif/tests/tst_model_builder.py iotbx/cif/tests/tst_parser.py iotbx/cif/tests/tst_restraints.py iotbx/cif/tests/tst_ucif_examples_compilation.py iotbx/cif/tests/tst_validation.py iotbx/cns/ iotbx/detectors/ iotbx/dsn6/ iotbx/examples/ iotbx/examples/pdb_truncate_to_ala/ iotbx/examples/pdb_truncate_to_ala/tst.py iotbx/gui_tools/ iotbx/kriber/ iotbx/mtz/ iotbx/pdb/ iotbx/pdb/remediation/ iotbx/regression/ iotbx/regression/ncs/ iotbx/regression/secondary_structure/ iotbx/regression/secondary_structure/tst_annotation.py iotbx/regression/secondary_structure/tst_sheet.py iotbx/scalepack/ iotbx/shelx/ iotbx/xds/ iotbx/xds/tests/ iotbx/xds/tests/tst_integrate_hkl.py iotbx/xds/tests/tst_spots_xds.py iotbx/xds/tests/tst_xds_inp.py iotbx/xds/tests/tst_xparm.py iotbx/xplor/ sent 265,150 bytes received 499 bytes 531,298.00 bytes/sec total size is 2,334,818 speedup is 8.79 building file list ... done libtbx/phil/ libtbx/queuing_system_utils/ sent 1,233 bytes received 18 bytes 2,502.00 bytes/sec total size is 243,381 speedup is 194.55 building file list ... done mmtbx/atomic_environment_vectors/ mmtbx/building/ mmtbx/building/ligands/ mmtbx/building/ligands/tst_00_mmtbx_building_ligands.map mmtbx/bulk_solvent/ mmtbx/chemical_components/ mmtbx/conformation_dependent_library/ mmtbx/density_modification/ mmtbx/disorder/ mmtbx/dynamics/ mmtbx/geometry/ mmtbx/geometry/tests/ mmtbx/geometry/tests/tst_altloc.py mmtbx/geometry/tests/tst_asa.py mmtbx/geometry/tests/tst_clash.py mmtbx/geometry/tests/tst_indexing.py mmtbx/geometry/tests/tst_shared_types.py mmtbx/geometry/tests/tst_sphere_surface_sampling.py mmtbx/geometry/tests/tst_topology.py mmtbx/geometry_restraints/ mmtbx/geometry_restraints/torsion_restraints/ mmtbx/hydrogens/ mmtbx/ias/ mmtbx/idealized_aa_residues/ mmtbx/ions/ mmtbx/ions/svm/ mmtbx/ligands/ mmtbx/maps/ mmtbx/masks/ mmtbx/masks/tst_mask.cpp mmtbx/max_lik/ mmtbx/monomer_library/ mmtbx/nci/ mmtbx/pair_interaction/ mmtbx/polygon/ mmtbx/probe/ mmtbx/probe/tst_probe.cpp mmtbx/real_space/ mmtbx/reduce/ mmtbx/refinement/ mmtbx/refinement/real_space/ mmtbx/regression/fix_cablam/ mmtbx/regression/fix_cablam/tst_basic_cl_operations.py mmtbx/regression/fix_cablam/tst_insertion_codes.py mmtbx/regression/fix_cablam/tst_one_resid_rotation.py mmtbx/regression/fix_cablam/tst_single_outliers_surroundings.py mmtbx/regression/model/ mmtbx/regression/model_idealization/ mmtbx/regression/model_idealization/tst_ext_map_01.py mmtbx/regression/model_idealization/tst_ligands.py mmtbx/regression/model_idealization/tst_nomap_01.py mmtbx/regression/model_idealization/tst_nomap_02.py mmtbx/regression/model_idealization/tst_nomap_03.py mmtbx/regression/model_idealization/tst_nomap_04.py mmtbx/regression/model_idealization/tst_with_mtz.py mmtbx/regression/model_idealization/tst_withmap_01.py mmtbx/regression/model_idealization/tst_withmap_02.py mmtbx/regression/model_idealization/tst_withmap_03.py mmtbx/regression/model_idealization/tst_withmap_04.py mmtbx/regression/model_idealization/tst_withmap_05.py mmtbx/regression/model_idealization/tst_withmap_06.py mmtbx/regression/mtz/ mmtbx/regression/mtz/tst_xtriage_fmodel.mtz mmtbx/regression/ncs/ mmtbx/regression/pdb_interpretation/ mmtbx/regression/pdb_interpretation/tst_edits.py mmtbx/regression/pdb_interpretation/tst_edits_actions.py mmtbx/regression/real_space_refine_chain/ mmtbx/regression/real_space_refine_chain/tst_00.py mmtbx/regression/real_space_refine_chain/tst_01.py mmtbx/regression/tls/ mmtbx/regression/tncs/ mmtbx/regression/tncs/tst_epsfac_and_radius.py mmtbx/regression/tncs/tst_fd.py mmtbx/regression/tncs/tst_moments.py mmtbx/regression/tncs/tst_pair.py mmtbx/ringer/ mmtbx/rotamer/ mmtbx/rsr/ mmtbx/scaling/ mmtbx/secondary_structure/ mmtbx/secondary_structure/build/ mmtbx/utils/ mmtbx/validation/ mmtbx/validation/regression/ mmtbx/wwpdb/ sent 748,955 bytes received 854 bytes 1,499,618.00 bytes/sec total size is 6,530,029 speedup is 8.71 building file list ... done omptbx/ sent 91 bytes received 19 bytes 220.00 bytes/sec total size is 1,175 speedup is 10.68 building file list ... done rstbx/bpcx/ rstbx/bpcx/detector_model/ rstbx/cftbx/ rstbx/diffraction/ rstbx/diffraction/fastbragg/ rstbx/dps_core/ rstbx/indexing/ rstbx/simage/ rstbx/simulation/ rstbx/sublattice_support/ rstbx/viewer/ sent 1,028 bytes received 45 bytes 2,146.00 bytes/sec total size is 179,407 speedup is 167.20 building file list ... done scitbx/array_family/ scitbx/array_family/tst_accessors.cpp scitbx/array_family/tst_af_1.cpp scitbx/array_family/tst_af_2.cpp scitbx/array_family/tst_af_3.cpp scitbx/array_family/tst_af_4.cpp scitbx/array_family/tst_af_5.cpp scitbx/array_family/tst_af_helpers.cpp scitbx/array_family/tst_mat3.cpp scitbx/array_family/tst_optional_copy.cpp scitbx/array_family/tst_rectangular_full_packed.cpp scitbx/array_family/tst_ref_matrix_facet.cpp scitbx/array_family/tst_sym_mat3.cpp scitbx/array_family/tst_unsigned_float_arithmetic.cpp scitbx/array_family/tst_vec3.cpp scitbx/array_family/boost_python/ scitbx/array_family/boost_python/tst_cost_of_m_handle_in_af_shared.py scitbx/array_family/boost_python/tst_flex.py scitbx/array_family/boost_python/tst_flex_argument_passing.py scitbx/array_family/boost_python/tst_integer_offsets_vs_pointers.py scitbx/array_family/boost_python/tst_numpy_bridge.py scitbx/array_family/boost_python/tst_shared.py scitbx/array_family/boost_python/tst_smart_selection.py scitbx/dtmin/ scitbx/dtmin/regression/ scitbx/dtmin/regression/tst_dtmin_basic.py scitbx/dtmin/regression/tst_dtmin_booth.py scitbx/dtmin/regression/tst_dtmin_twisted.py scitbx/error/ scitbx/error/tst_error.cpp scitbx/error/tst_error.py scitbx/fftpack/ scitbx/fftpack/boost_python/ scitbx/fftpack/boost_python/tst_fftpack.py scitbx/fftpack/timing/ scitbx/fftpack/timing/tst3d.cpp scitbx/glmtbx/ scitbx/glmtbx/tests/ scitbx/glmtbx/tests/tst.py scitbx/graph/ scitbx/graphics_utils/ scitbx/iso_surface/ scitbx/iso_surface/tst_iso_surface.m scitbx/lbfgs/ scitbx/lbfgs/tst_lbfgs.cpp scitbx/lbfgsb/ scitbx/lbfgsb/boost_python/ scitbx/lbfgsb/boost_python/tst_fit_cdf.py scitbx/lbfgsb/boost_python/tst_lbfgsb.py scitbx/linalg/ scitbx/linalg/tests/ scitbx/linalg/tests/tst_cholesky.py scitbx/linalg/tests/tst_eigensystem.py scitbx/linalg/tests/tst_lapack_dsyev.py scitbx/linalg/tests/tst_lapack_svd.py scitbx/linalg/tests/tst_matrix.py scitbx/linalg/tests/tst_svd.py scitbx/lstbx/ scitbx/lstbx/tests/ scitbx/lstbx/tests/tst_normal_equations.nb scitbx/math/ scitbx/math/tests/ scitbx/math/tests/tst.cpp scitbx/matrix/ scitbx/matrix/tests/ scitbx/matrix/tests/tst_cholesky.cpp scitbx/matrix/tests/tst_givens.cpp scitbx/matrix/tests/tst_householder.cpp scitbx/matrix/tests/tst_householder.nb scitbx/matrix/tests/tst_householder.py scitbx/matrix/tests/tst_row_echelon.py scitbx/matrix/tests/tst_svd.cpp scitbx/matrix/tests/tst_svd.nb scitbx/matrix/tests/tst_svd_accuracy.nb scitbx/minpack/ scitbx/minpack/tst.py scitbx/python_utils/ scitbx/random/ scitbx/random/tests/ scitbx/random/tests/tst_random.py scitbx/rigid_body/ scitbx/rigid_body/essence/ scitbx/rigid_body/proto/ scitbx/serialization/ scitbx/serialization/tst_base_256.cpp scitbx/sparse/ scitbx/sparse/tests/ scitbx/sparse/tests/tst_lu_factorization.py scitbx/sparse/tests/tst_sparse.cpp scitbx/sparse/tests/tst_sparse.py scitbx/stl/ scitbx/suffixtree/ scitbx/suffixtree/test/ scitbx/suffixtree/test/tst_single.py scitbx/tests/ scitbx/tests/tst_basic.csh scitbx/tests/tst_basic.py scitbx/tests/tst_cubicle_neighbors.py scitbx/tests/tst_genetic_algorithm_with_mp.py scitbx/tests/tst_r3_utils.py scitbx/tests/tst_regular_grid_on_unit_sphere.py scitbx/tests/tst_smoothing.py scitbx/wigner/ sent 674,878 bytes received 1,349 bytes 1,352,454.00 bytes/sec total size is 1,108,176 speedup is 1.64 building file list ... done sent 182 bytes received 12 bytes 388.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done smtbx/ab_initio/ smtbx/ab_initio/tests/ smtbx/absolute_structure/ smtbx/absolute_structure/tests/ smtbx/absolute_structure/tests/tst_absolute_structure.py smtbx/masks/ smtbx/masks/tests/ smtbx/masks/tests/tst_masks.py smtbx/refinement/ smtbx/refinement/constraints/ smtbx/refinement/constraints/tests/ smtbx/refinement/constraints/tests/tst_geometrical_hydrogens.cpp smtbx/refinement/constraints/tests/tst_reparametrisation.cpp smtbx/refinement/constraints/tests/tst_special_position.cpp smtbx/refinement/restraints/ smtbx/refinement/restraints/tests/ smtbx/refinement/restraints/tests/tst_restraints.py smtbx/refinement/tests/ smtbx/refinement/tests/tst_least_squares.py smtbx/refinement/tests/tst_weighting_schemes.py smtbx/regression/ smtbx/structure_factors/ smtbx/structure_factors/direct/ smtbx/structure_factors/direct/tests/ smtbx/structure_factors/direct/tests/tst_standard_xray.py sent 130,426 bytes received 231 bytes 261,314.00 bytes/sec total size is 208,206 speedup is 1.59 building file list ... done spotfinder/core_toolbox/ spotfinder/core_toolbox/boost_python/ spotfinder/core_toolbox/boost_python/tst_small_image.py sent 5,474 bytes received 37 bytes 11,022.00 bytes/sec total size is 5,074 speedup is 0.92 building file list ... done tbxx/ tbxx/tests/ tbxx/tests/tst_pretty_type_name.cpp sent 493 bytes received 41 bytes 1,068.00 bytes/sec total size is 323 speedup is 0.60 building file list ... done wxtbx/regression/ wxtbx/regression/tst_process_control.py sent 2,010 bytes received 34 bytes 4,088.00 bytes/sec total size is 1,770 speedup is 0.87 building file list ... done ./ annlib_adaptbx/ annlib_adaptbx/tests/ annlib_adaptbx/tests/data.txt annlib_adaptbx/tests/query.txt cma_es/cma/ cma_es/cma/initials.par fable/fem/ fable/fem/major_types.hpp fable/test/sf_times.py fable/test/lenient/ fable/test/lenient/NOTE fable/test/lenient/calling_non_external_arg.f fable/test/lenient/str_blank_str.f fable/test/lenient/str_cont_line_str.f fable/test/semantic_error/ fable/test/semantic_error/assignment_to_parameter.f fable/test/semantic_error/calling_array.f fable/test/semantic_error/calling_dimension.f fable/test/semantic_error/common_equivalence.f fable/test/semantic_error/dimension_unknown_data_type.f fable/test/semantic_error/dims_repeated_in_common.f fable/test/semantic_error/dims_repeated_in_dimension.f fable/test/semantic_error/equivalence_external.f fable/test/semantic_error/external_array.f fable/test/semantic_error/external_common.f fable/test/semantic_error/function_data_type_decl_twice.f fable/test/semantic_error/function_name_is_also_arg.f fable/test/semantic_error/inquire_both_unit_and_file.f fable/test/semantic_error/inquire_no_unit_no_file.f fable/test/semantic_error/intrinsic_common.f fable/test/semantic_error/intrinsic_dimension.f fable/test/semantic_error/missing_include.f fable/test/semantic_error/parameter_array.f fable/test/semantic_error/parameter_in_common.f fable/test/semantic_error/parameter_in_sub_args.f fable/test/semantic_error/parameter_save.f fable/test/semantic_error/real_declared_twice.f fable/test/semantic_error/recursion_in_declaration.f fable/test/semantic_error/sub_fun_2.f fable/test/semantic_error/subroutine_name_is_also_arg.f fable/test/semantic_error/twice_in_sub_args.f fable/test/semantic_error/unknown_intrinsic.f fable/test/semantic_error/write_end.f fable/test/semantic_error/write_without_unit.f fable/test/syntax_error/ fable/test/syntax_error/bad_after_dot.f fable/test/syntax_error/bad_and.f fable/test/syntax_error/bad_complex_literal_1.f fable/test/syntax_error/bad_complex_literal_2.f fable/test/syntax_error/bad_data.f fable/test/syntax_error/bad_false.f fable/test/syntax_error/bad_format_1.f fable/test/syntax_error/bad_format_2.f fable/test/syntax_error/bad_format_3.f fable/test/syntax_error/bad_format_4.f fable/test/syntax_error/bad_format_5.f fable/test/syntax_error/bad_format_6.f fable/test/syntax_error/bad_format_7.f fable/test/syntax_error/bad_gt.f fable/test/syntax_error/bad_implied_do_1.f fable/test/syntax_error/bad_implied_do_2.f fable/test/syntax_error/bad_implied_do_3.f fable/test/syntax_error/bad_implied_do_4.f fable/test/syntax_error/bad_implied_do_5.f fable/test/syntax_error/bad_implied_do_6.f fable/test/syntax_error/bad_not.f fable/test/syntax_error/bad_not_2.f fable/test/syntax_error/bad_open_err_label.f fable/test/syntax_error/bad_or.f fable/test/syntax_error/bad_true.f fable/test/syntax_error/bare_data.f fable/test/syntax_error/bare_external.f fable/test/syntax_error/bare_integer_i.f fable/test/syntax_error/bare_print.f fable/test/syntax_error/closing_parenthesis_without_matching.f fable/test/syntax_error/common_with_data_size.f fable/test/syntax_error/data_plus_repetition.f fable/test/syntax_error/dimension_with_data_size.f fable/test/syntax_error/dot_e.f fable/test/syntax_error/duplicate_format_label.f fable/test/syntax_error/exclamation_mark_syndrome.f fable/test/syntax_error/format_without_label.f fable/test/syntax_error/fun_star.f fable/test/syntax_error/j_assign_i_percent_5.f fable/test/syntax_error/label_cont_char.f fable/test/syntax_error/label_empty.f fable/test/syntax_error/not_an_identifier.f fable/test/syntax_error/opening_parenthesis_without_matching.f fable/test/syntax_error/power_no_base.f fable/test/syntax_error/power_no_exponent.f fable/test/syntax_error/read_plus_name.f fable/test/syntax_error/read_star_comma_empty.f fable/test/syntax_error/read_star_name.f fable/test/syntax_error/save_bad_comma.f fable/test/syntax_error/save_num_comma_colon.f fable/test/syntax_error/save_num_val_colon.f fable/test/syntax_error/save_slash_slash.f fable/test/syntax_error/save_with_dims.f fable/test/syntax_error/sub_bad_comma.f fable/test/syntax_error/sub_bad_trailing.f fable/test/syntax_error/sub_no_name.f fable/test/syntax_error/sub_open_parenthesis.f fable/test/syntax_error/sub_percent_3.f fable/test/syntax_error/x_assign_1dotd.f fable/test/syntax_error/x_assign_1ex.f fable/test/syntax_error/x_assign_dot.f fable/test/syntax_error/x_assign_dot_2.f fable/test/unsupported/ fable/test/unsupported/goto_into_loop.f fable/test/unsupported/hollerith_cont_lines.f fable/test/unsupported/hollerith_with_quotes.f fable/test/unsupported/parameter_pow.f fable/test/valid/ fable/test/valid/add_dp_integer.f fable/test/valid/add_real_integer.f fable/test/valid/add_reals.f fable/test/valid/add_strings.f fable/test/valid/arr_float_2.f fable/test/valid/array_origin.f fable/test/valid/assign_to_array_elements.f fable/test/valid/blockdata_named.f fable/test/valid/blockdata_unnamed.f fable/test/valid/character_1_array_passing.f fable/test/valid/character_1_f90.f fable/test/valid/character_function.f fable/test/valid/character_function_2.f fable/test/valid/character_function_3.f fable/test/valid/combine_decl_1.f fable/test/valid/comments.f fable/test/valid/common_0.f fable/test/valid/common_1.f fable/test/valid/common_2.f fable/test/valid/common_3.f fable/test/valid/common_4.f fable/test/valid/common_equivalence_1.f fable/test/valid/common_equivalence_2.f fable/test/valid/common_equivalence_3.f fable/test/valid/common_equivalence_4.f fable/test/valid/common_equivalence_5.f fable/test/valid/common_equivalence_simple_1.f fable/test/valid/common_equivalence_simple_2.f fable/test/valid/common_equivalence_simple_3.f fable/test/valid/common_equivalence_simple_4.f fable/test/valid/common_equivalence_simple_5.f fable/test/valid/common_equivalence_simple_6.f fable/test/valid/common_name_clash.f fable/test/valid/common_name_clash_2.f fable/test/valid/common_name_clash_3.f fable/test/valid/common_save_members.f fable/test/valid/common_variants.f fable/test/valid/commonymous.f fable/test/valid/const_analysis_1.f fable/test/valid/const_analysis_2.f fable/test/valid/const_expressions.f fable/test/valid/const_expressions_2.f fable/test/valid/conv_recipe.f fable/test/valid/cycle_exit.f fable/test/valid/data_01.f fable/test/valid/data_02.f fable/test/valid/data_03.f fable/test/valid/data_04.f fable/test/valid/data_05.f fable/test/valid/data_06.f fable/test/valid/data_07.f fable/test/valid/data_08.f fable/test/valid/data_09.f fable/test/valid/data_10.f fable/test/valid/data_11.f fable/test/valid/data_12.f fable/test/valid/data_13.f fable/test/valid/data_14.f fable/test/valid/data_15.f fable/test/valid/data_16.f fable/test/valid/data_17.f fable/test/valid/data_18.f fable/test/valid/data_19.f fable/test/valid/data_20.f fable/test/valid/data_21.f fable/test/valid/data_22.f fable/test/valid/data_23.f fable/test/valid/data_24.f fable/test/valid/data_25.f fable/test/valid/data_26.f fable/test/valid/data_27.f fable/test/valid/data_28.f fable/test/valid/data_29.f fable/test/valid/data_30.f fable/test/valid/data_31.f fable/test/valid/data_32.f fable/test/valid/data_byte.f fable/test/valid/data_double_from_double_and_float.f fable/test/valid/data_str_arr.f fable/test/valid/data_type_star.f fable/test/valid/data_types.f fable/test/valid/decl_before_if.f fable/test/valid/dependency_cycle.f fable/test/valid/dim_with_parameter.f fable/test/valid/dimensions.f fable/test/valid/do_enddo.f fable/test/valid/do_ix_num.f fable/test/valid/do_label.f fable/test/valid/do_variable_passed.f fable/test/valid/do_while.f fable/test/valid/doc_data_type_star.f fable/test/valid/double_literal.f fable/test/valid/dp_example.f fable/test/valid/dynamic_parameters_1.f fable/test/valid/dynamic_parameters_2.f fable/test/valid/dynamic_parameters_3.f fable/test/valid/dynamic_parameters_4.f fable/test/valid/dynamic_parameters_5.f fable/test/valid/entry_fun_1.f fable/test/valid/entry_fun_2.f fable/test/valid/entry_sub_1.f fable/test/valid/entry_sub_2.f fable/test/valid/equivalence_01.f fable/test/valid/equivalence_02.f fable/test/valid/equivalence_03.f fable/test/valid/equivalence_04.f fable/test/valid/equivalence_05.f fable/test/valid/equivalence_06.f fable/test/valid/equivalence_07.f fable/test/valid/equivalence_08.f fable/test/valid/equivalence_09.f fable/test/valid/equivalence_10.f fable/test/valid/equivalence_11.f fable/test/valid/equivalence_12.f fable/test/valid/equivalence_data.f fable/test/valid/equivalence_mixed.f fable/test/valid/equivalence_repeated.f fable/test/valid/external_arg_function.f fable/test/valid/external_arg_layers.f fable/test/valid/external_arg_non_const.f fable/test/valid/external_arg_pass_call.f fable/test/valid/external_arg_simple.f fable/test/valid/external_arg_subroutine.f fable/test/valid/f90_ne_token.f fable/test/valid/file_names_and_expected_cout fable/test/valid/flush_external.f fable/test/valid/flush_intrinsic.f fable/test/valid/format_escape.f fable/test/valid/format_nested.f fable/test/valid/format_quote_syndrome.f fable/test/valid/format_str_blank_str.f fable/test/valid/format_used_twice.f fable/test/valid/formats.f fable/test/valid/function_calls_with_its_name_as_arg.f fable/test/valid/function_data_type_in_body.f fable/test/valid/function_no_arg.f fable/test/valid/function_no_arg_with_common_in_expression.f fable/test/valid/function_two_returns_1.f fable/test/valid/function_two_returns_2.f fable/test/valid/function_write.f fable/test/valid/goto_computed.f fable/test/valid/goto_forms.f fable/test/valid/goto_last_do.f fable/test/valid/goto_spaghetti.f fable/test/valid/goto_target_before_else.f fable/test/valid/hexadecimal.f fable/test/valid/hollerith.f fable/test/valid/identifier_prefix.f fable/test/valid/if_arithmetic.f fable/test/valid/if_cond_if_arithmetic.f fable/test/valid/if_else_endif.f fable/test/valid/if_elseif_else_endif.f fable/test/valid/if_endif.f fable/test/valid/if_spaghetti.f fable/test/valid/if_write.f fable/test/valid/implicit_integer_a.f fable/test/valid/implicit_ranges.f fable/test/valid/implied_external_arg_sub.f fable/test/valid/implied_external_arg_sub_2.f fable/test/valid/implied_program.f fable/test/valid/implied_trailing_program.f fable/test/valid/inquire.f fable/test/valid/inquire_opened.f fable/test/valid/int_literal_eq_int_literal.f fable/test/valid/integer_star_2_array.f fable/test/valid/intrinsic_with_data_type.f fable/test/valid/intrinsics_extra.f fable/test/valid/intrinsics_iargc_getarg.f fable/test/valid/intrinsics_legacy.f fable/test/valid/label_format.f fable/test/valid/len_trim.f fable/test/valid/logical_a_or_b.f fable/test/valid/logical_ops.f fable/test/valid/long_lines.f fable/test/valid/main_cmn_indirect.f fable/test/valid/mod_integers.f fable/test/valid/open_chain.f fable/test/valid/open_write_read.f fable/test/valid/open_write_read_2.f fable/test/valid/ops.f fable/test/valid/parameter_for_arg_and_cmn_dim.f fable/test/valid/parameter_n.f fable/test/valid/parameter_save.f fable/test/valid/parameter_save_common.f fable/test/valid/parameters_2.f fable/test/valid/parameters_recursive.f fable/test/valid/parameters_recursive_2.f fable/test/valid/passing_arrays.f fable/test/valid/passing_arrays_2.f fable/test/valid/passing_strings.f fable/test/valid/power.f fable/test/valid/power_2.f fable/test/valid/print.f fable/test/valid/read_end.f fable/test/valid/read_end_empty.f fable/test/valid/read_end_err.f fable/test/valid/read_end_err_star_double.f fable/test/valid/read_err.f fable/test/valid/read_fmt_double.f fable/test/valid/read_fmt_past_end_of_line.f fable/test/valid/read_fmt_real.f fable/test/valid/read_fmt_slash.f fable/test/valid/read_fmt_string.f fable/test/valid/read_fmt_x.f fable/test/valid/read_format.f fable/test/valid/read_implied_do_1.f fable/test/valid/read_iostat_end_err_1.f fable/test/valid/read_iostat_end_err_2.f fable/test/valid/read_iostat_from_file.f fable/test/valid/read_iostat_from_string.f fable/test/valid/read_lines.f fable/test/valid/read_rec_iostat.f fable/test/valid/read_star.f fable/test/valid/read_star_empty.f fable/test/valid/read_star_integer.f fable/test/valid/read_star_print_star.f fable/test/valid/read_test_1.f fable/test/valid/read_test_1_iostat.f fable/test/valid/read_test_2.f fable/test/valid/read_test_3.f fable/test/valid/read_unformatted_str_arr.f fable/test/valid/real_array_sum.f fable/test/valid/recursive_subroutine.f fable/test/valid/rewind.f fable/test/valid/save_0.f fable/test/valid/save_1.f fable/test/valid/save_2.f fable/test/valid/save_3.f fable/test/valid/save_equivalence_1.f fable/test/valid/scopes_1.f fable/test/valid/scopes_2.f fable/test/valid/scopes_3.f fable/test/valid/scopes_4.f fable/test/valid/sf.f fable/test/valid/sign.f fable/test/valid/stop_bare.f fable/test/valid/stop_integer.f fable/test/valid/stop_string.f fable/test/valid/string_array.f fable/test/valid/string_array_declarations.f fable/test/valid/string_assign_to_slice.f fable/test/valid/string_common_dims.f fable/test/valid/string_compare.f fable/test/valid/string_concat.f fable/test/valid/string_spanning_continuation_lines.f fable/test/valid/string_sub_array_passing.f fable/test/valid/strings_size_dim.f fable/test/valid/strings_size_dim_data.f fable/test/valid/sub_fun_1.f fable/test/valid/sub_fun_3.f fable/test/valid/sub_nums_size_capacity.f fable/test/valid/sub_star.f fable/test/valid/subroutine_1.f fable/test/valid/subroutine_2.f fable/test/valid/subroutine_3.f fable/test/valid/subroutine_4.f fable/test/valid/subroutine_5.f fable/test/valid/subroutine_6.f fable/test/valid/subroutine_7.f fable/test/valid/subroutine_8.f fable/test/valid/subroutine_9.f fable/test/valid/subroutine_write_iunit.f fable/test/valid/subroutine_zero.f fable/test/valid/tab_syndrome.f fable/test/valid/triple_3d.f fable/test/valid/triple_3d_common.f fable/test/valid/unformatted_experiments.f fable/test/valid/unused_arg_implicit_none.f fable/test/valid/unused_args.f fable/test/valid/using_intrinsics.f fable/test/valid/write_1.f fable/test/valid/write_err.f fable/test/valid/write_extra_parentheses.f fable/test/valid/write_fmt_double.f fable/test/valid/write_format.f fable/test/valid/write_format_with_colon.f fable/test/valid/write_implied_do_1.f fable/test/valid/write_implied_do_2.f fable/test/valid/write_implied_do_3.f fable/test/valid/write_implied_do_4.f fable/test/valid/write_implied_do_5.f fable/test/valid/write_internal_file.f fable/test/valid/write_internal_file_2.f fable/test/valid/write_internal_file_3.f fable/test/valid/write_internal_file_4.f fable/test/valid/write_pow.f fable/test/valid/write_read_end_err_implied_do.f fable/test/valid/write_read_unformatted.f fable/test/valid/write_star.f fable/test/valid/write_star_real_star_4.f fable/test/valid/write_star_real_star_8.f iotbx/bioinformatics/test/alignment.pir iotbx/bioinformatics/test/ebi_blast.xml.gz iotbx/bioinformatics/test/ncbi_blast.xml.gz iotbx/ccp4_map/ccp4_20_21_22_to_30_40_50.ccp4 iotbx/examples/pdb_truncate_to_ala/crambin_pieces.pdb iotbx/examples/pdb_truncate_to_ala/resname_mix.pdb iotbx/examples/pdb_truncate_to_ala/tutorial.txt iotbx/examples/pdb_truncate_to_ala/v0_getting_started.py iotbx/examples/pdb_truncate_to_ala/v1_loop_over_atoms.py iotbx/examples/pdb_truncate_to_ala/v2_simple.py iotbx/examples/pdb_truncate_to_ala/v3_better.py iotbx/examples/pdb_truncate_to_ala/v4_with_bells_and_whistles.py iotbx/regression/data/ iotbx/regression/data/1yjp.pdb iotbx/regression/data/2ERL.pdb iotbx/regression/data/D7.ccp4 iotbx/regression/data/big_cube_model.pdb iotbx/regression/data/cu3182Isup2.hkl iotbx/regression/data/cu3182sup1.cif iotbx/regression/data/insulin_unmerged_cutted_from_ccp4.mtz iotbx/regression/data/mmma.ccp4 iotbx/regression/data/mmmab.ccp4 iotbx/regression/data/mmmb.ccp4 iotbx/regression/data/non_zero_origin_map.ccp4 iotbx/regression/data/non_zero_origin_model.pdb iotbx/regression/data/non_zero_origin_model_split.pdb iotbx/regression/data/non_zero_origin_ncs_model.pdb iotbx/regression/data/non_zero_origin_ncs_spec.ncs_spec iotbx/regression/data/pdb1zff.ent iotbx/regression/data/phaser_1.mtz iotbx/regression/data/shelx.ins iotbx/xds/tests/INTEGRATE.HKL iotbx/xds/tests/NEW_XPARM.XDS iotbx/xds/tests/XDS.INP iotbx/xds/tests/XDS_2.INP iotbx/xds/tests/XPARM.XDS libtbx/citations.params mmtbx/regression/pdbs/ mmtbx/regression/pdbs/1ucs_cutted_xyz_rounded.pdb mmtbx/regression/pdbs/AF_json_v3.pdb mmtbx/regression/pdbs/Fe_1brf_snip_reduced.pdb mmtbx/regression/pdbs/fibronectin_af_ca_1358_1537.pdb mmtbx/regression/pdbs/ligand_before_prot.pdb mmtbx/regression/pdbs/one_chain_ligand_water.pdb mmtbx/regression/pdbs/p9.pdb mmtbx/regression/pdbs/pae.pdb mmtbx/regression/pdbs/pae_model.pdb mmtbx/regression/pdbs/two_chains_ligand_water.pdb rstbx/indexing/results2.dat rstbx/indexing/si_brief.dat rstbx/indexing/si_synthetic.dat scitbx/array_family/boost_python/regression_test.py scitbx/tests/differential_evolution.py scitbx/tests/direct_search_simulated_annealing.py scitbx/tests/golden_section_search.py scitbx/tests/simplex.py smtbx/regression/test_data/ smtbx/regression/test_data/sucrose_p1.res smtbx/regression/test_data/thpp.cif smtbx/regression/test_data/thpp.hkl smtbx/regression/test_data/thpp.ins sent 4,272,419 bytes received 8,714 bytes 8,562,266.00 bytes/sec total size is 4,208,590 speedup is 0.98 make[1]: Leaving directory '/<>' dh_install -a -O--buildsystem=pybuild install -m0755 -d debian/libcctbx0//usr/lib/s390x-linux-gnu cp --reflink=auto -a debian/tmp/usr/lib/s390x-linux-gnu/libann_adaptor.so.0 debian/tmp/usr/lib/s390x-linux-gnu/libann_adaptor.so.0.0.1 debian/tmp/usr/lib/s390x-linux-gnu/libasymmetric_map.so.0 debian/tmp/usr/lib/s390x-linux-gnu/libasymmetric_map.so.0.0.1 debian/tmp/usr/lib/s390x-linux-gnu/libcbf-private.so.0 debian/tmp/usr/lib/s390x-linux-gnu/libcbf-private.so.0.0.1 debian/tmp/usr/lib/s390x-linux-gnu/libccp4io.so.0 debian/tmp/usr/lib/s390x-linux-gnu/libccp4io.so.0.0.1 debian/tmp/usr/lib/s390x-linux-gnu/libcctbx.so.0 debian/tmp/usr/lib/s390x-linux-gnu/libcctbx.so.0.0.1 debian/tmp/usr/lib/s390x-linux-gnu/libcctbx_sgtbx_asu.so.0 debian/tmp/usr/lib/s390x-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 debian/tmp/usr/lib/s390x-linux-gnu/libdxtbxspotfinder.so.0 debian/tmp/usr/lib/s390x-linux-gnu/libdxtbxspotfinder.so.0.0.1 debian/tmp/usr/lib/s390x-linux-gnu/libiotbx_mtz.so.0 debian/tmp/usr/lib/s390x-linux-gnu/libiotbx_mtz.so.0.0.1 debian/tmp/usr/lib/s390x-linux-gnu/libiotbx_pdb.so.0 debian/tmp/usr/lib/s390x-linux-gnu/libiotbx_pdb.so.0.0.1 debian/tmp/usr/lib/s390x-linux-gnu/libiotbx_xplor.so.0 debian/tmp/usr/lib/s390x-linux-gnu/libiotbx_xplor.so.0.0.1 debian/tmp/usr/lib/s390x-linux-gnu/libmmtbx_masks.so.0 debian/tmp/usr/lib/s390x-linux-gnu/libmmtbx_masks.so.0.0.1 debian/tmp/usr/lib/s390x-linux-gnu/libmmtbx_tls.so.0 debian/tmp/usr/lib/s390x-linux-gnu/libmmtbx_tls.so.0.0.1 debian/tmp/usr/lib/s390x-linux-gnu/libomptbx.so.0 debian/tmp/usr/lib/s390x-linux-gnu/libomptbx.so.0.0.1 debian/tmp/usr/lib/s390x-linux-gnu/librstbx.so.0 debian/tmp/usr/lib/s390x-linux-gnu/librstbx.so.0.0.1 debian/tmp/usr/lib/s390x-linux-gnu/libscitbx_boost_python.so.0 debian/tmp/usr/lib/s390x-linux-gnu/libscitbx_boost_python.so.0.0.1 debian/tmp/usr/lib/s390x-linux-gnu/libscitbx_minpack.so.0 debian/tmp/usr/lib/s390x-linux-gnu/libscitbx_minpack.so.0.0.1 debian/tmp/usr/lib/s390x-linux-gnu/libscitbx_slatec.so.0 debian/tmp/usr/lib/s390x-linux-gnu/libscitbx_slatec.so.0.0.1 debian/tmp/usr/lib/s390x-linux-gnu/libsmtbx_refinement_constraints.so.0 debian/tmp/usr/lib/s390x-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 debian/tmp/usr/lib/s390x-linux-gnu/libspotfinder.so.0 debian/tmp/usr/lib/s390x-linux-gnu/libspotfinder.so.0.0.1 debian/libcctbx0//usr/lib/s390x-linux-gnu/ install -m0755 -d debian/libcctbx-dev//usr cp --reflink=auto -a debian/tmp/usr/include/ debian/libcctbx-dev//usr/ install -m0755 -d debian/libcctbx-dev//usr/lib/s390x-linux-gnu cp --reflink=auto -a debian/tmp/usr/lib/s390x-linux-gnu/libann_adaptor.so debian/tmp/usr/lib/s390x-linux-gnu/libasymmetric_map.so debian/tmp/usr/lib/s390x-linux-gnu/libcbf-private.so debian/tmp/usr/lib/s390x-linux-gnu/libccp4io.so debian/tmp/usr/lib/s390x-linux-gnu/libcctbx.so debian/tmp/usr/lib/s390x-linux-gnu/libcctbx_sgtbx_asu.so debian/tmp/usr/lib/s390x-linux-gnu/libdxtbxspotfinder.so debian/tmp/usr/lib/s390x-linux-gnu/libiotbx_mtz.so debian/tmp/usr/lib/s390x-linux-gnu/libiotbx_pdb.so debian/tmp/usr/lib/s390x-linux-gnu/libiotbx_xplor.so debian/tmp/usr/lib/s390x-linux-gnu/libmmtbx_masks.so debian/tmp/usr/lib/s390x-linux-gnu/libmmtbx_tls.so debian/tmp/usr/lib/s390x-linux-gnu/libomptbx.so debian/tmp/usr/lib/s390x-linux-gnu/librstbx.so debian/tmp/usr/lib/s390x-linux-gnu/libscitbx_boost_python.so debian/tmp/usr/lib/s390x-linux-gnu/libscitbx_minpack.so debian/tmp/usr/lib/s390x-linux-gnu/libscitbx_slatec.so debian/tmp/usr/lib/s390x-linux-gnu/libsmtbx_refinement_constraints.so debian/tmp/usr/lib/s390x-linux-gnu/libspotfinder.so debian/libcctbx-dev//usr/lib/s390x-linux-gnu/ install -m0755 -d debian/python3-cctbx//usr cp --reflink=auto -a debian/tmp/usr/bin debian/python3-cctbx//usr/ install -m0755 -d debian/python3-cctbx//usr/lib cp --reflink=auto -a debian/tmp/usr/lib/cctbx debian/tmp/usr/lib/python3.12 debian/python3-cctbx//usr/lib/ dh_installdocs -a -O--buildsystem=pybuild install -m0755 -d debian/libcctbx0/usr/share/doc/libcctbx0 install -p -m0644 debian/copyright debian/libcctbx0/usr/share/doc/libcctbx0/copyright install -m0755 -d debian/libcctbx-dev/usr/share/doc/libcctbx-dev install -p -m0644 debian/copyright debian/libcctbx-dev/usr/share/doc/libcctbx-dev/copyright install -m0755 -d debian/python3-cctbx/usr/share/doc/python3-cctbx install -p -m0644 debian/copyright debian/python3-cctbx/usr/share/doc/python3-cctbx/copyright dh_installchangelogs -a -O--buildsystem=pybuild install -m0755 -d debian/libcctbx0/usr/share/doc/libcctbx0 install -p -m0644 debian/.debhelper/generated/libcctbx0/dh_installchangelogs.dch.trimmed debian/libcctbx0/usr/share/doc/libcctbx0/changelog.Debian install -m0755 -d debian/python3-cctbx/usr/share/doc/python3-cctbx install -p -m0644 debian/.debhelper/generated/python3-cctbx/dh_installchangelogs.dch.trimmed debian/python3-cctbx/usr/share/doc/python3-cctbx/changelog.Debian install -m0755 -d debian/libcctbx-dev/usr/share/doc/libcctbx-dev install -p -m0644 debian/.debhelper/generated/libcctbx-dev/dh_installchangelogs.dch.trimmed debian/libcctbx-dev/usr/share/doc/libcctbx-dev/changelog.Debian dh_python3 -a -O--buildsystem=pybuild D: dh_python3 dh_python3:179: version: 6.20231223ubuntu2 D: dh_python3 dh_python3:180: argv: ['/usr/bin/dh_python3', '-a', '-O--buildsystem=pybuild'] D: dh_python3 dh_python3:181: options: Namespace(guess_deps=True, skip_private=False, verbose=True, arch=True, package=None, no_package=None, remaining_packages=False, compile_all=False, vrange=None, regexpr=None, accept_upstream_versions=False, depends=None, depends_section=None, recommends=None, recommends_section=None, suggests=None, suggests_section=None, requires=None, shebang=None, ignore_shebangs=False, clean_dbg_pkg=True, no_ext_rename=False, no_shebang_rewrite=False, private_dir=None, O=['--buildsystem=pybuild']) D: dh_python3 dh_python3:182: supported Python versions: 3.12 (default=3.12) D: dh_python3 debhelper:175: skipping package libcctbx0 (missing ${python3:Depends} in Depends/Recommends) D: dh_python3 debhelper:175: skipping package libcctbx-dev (missing ${python3:Depends} in Depends/Recommends) D: dh_python3 debhelper:183: source=cctbx, binary packages=['python3-cctbx'] D: dh_python3 dh_python3:204: processing package python3-cctbx... D: dh_python3 fs:50: moving files from debian/python3-cctbx/usr/lib/python3.12/dist-packages to debian/python3-cctbx/usr/lib/python3/dist-packages/ D: dh_python3 tools:231: invoking: /usr/bin/python3.12 -c 'import sysconfig as s;print("__SEP__".join(i or "" for i in s.get_config_vars("SOABI", "MULTIARCH", "INCLUDEPY", "LIBPL", "LDLIBRARY")))' I: dh_python3 fs:431: renaming mmtbx_mosaic_ext.so to mmtbx_mosaic_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming rstbx_ext.so to rstbx_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_crystal_ext.so to cctbx_crystal_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming scitbx_stl_set_ext.so to scitbx_stl_set_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming smtbx_stl_map_ext.so to smtbx_stl_map_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming scitbx_suffixtree_shared_ext.so to scitbx_suffixtree_shared_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming iotbx_scalepack_ext.so to iotbx_scalepack_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming rstbx_symmetry_constraints_ext.so to rstbx_symmetry_constraints_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_geometry_ext.so to cctbx_geometry_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming rstbx_array_family_flex_ext.so to rstbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming rstbx_bandpass_ext.so to rstbx_bandpass_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_xray_observations_ext.so to cctbx_xray_observations_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming spotfinder_array_family_flex_ext.so to spotfinder_array_family_flex_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_probe_ext.so to mmtbx_probe_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_ramachandran_restraints_ext.so to mmtbx_ramachandran_restraints_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_eltbx_neutron_ext.so to cctbx_eltbx_neutron_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming dxtbx_format_image_ext.so to dxtbx_format_image_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_translation_search_ext.so to cctbx_translation_search_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_validation_ramachandran_ext.so to mmtbx_validation_ramachandran_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming scitbx_wigner_ext.so to scitbx_wigner_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_geometry_indexing_ext.so to mmtbx_geometry_indexing_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming std_pair_ext.so to std_pair_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming scitbx_sparse_ext.so to scitbx_sparse_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_math_ext.so to cctbx_math_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_masks_ext.so to cctbx_masks_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming dxtbx_format_nexus_ext.so to dxtbx_format_nexus_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_dynamics_ext.so to mmtbx_dynamics_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_orientation_ext.so to cctbx_orientation_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming gltbx_viewer_utils_ext.so to gltbx_viewer_utils_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_tls_decompose_ext.so to mmtbx_tls_decompose_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming gltbx_gl_ext.so to gltbx_gl_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming omptbx_ext.so to omptbx_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming smtbx_refinement_restraints_ext.so to smtbx_refinement_restraints_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_merging_ext.so to cctbx_merging_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming ccp4io_adaptbx_ext.so to ccp4io_adaptbx_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_eltbx_wavelengths_ext.so to cctbx_eltbx_wavelengths_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_adptbx_ext.so to cctbx_adptbx_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_symmetry_search_ext.so to cctbx_symmetry_search_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming boost_adaptbx_graph_utility_ext.so to boost_adaptbx_graph_utility_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming scitbx_array_family_shared_ext.so to scitbx_array_family_shared_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_eltbx_henke_ext.so to cctbx_eltbx_henke_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming scitbx_random_ext.so to scitbx_random_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming boost_adaptbx_graph_connected_component_algorithm_ext.so to boost_adaptbx_graph_connected_component_algorithm_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_array_family_flex_ext.so to cctbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming boost_python_hybrid_times_ext.so to boost_python_hybrid_times_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming iotbx_pdb_ext.so to iotbx_pdb_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming iotbx_dtrek_ext.so to iotbx_dtrek_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming determine_unit_cell_ext.so to determine_unit_cell_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming scitbx_array_family_flex_ext.so to scitbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming boost_adaptbx_python_streambuf_test_ext.so to boost_adaptbx_python_streambuf_test_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming scitbx_graphics_utils_ext.so to scitbx_graphics_utils_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming boost_adaptbx_graph_graph_structure_comparison_ext.so to boost_adaptbx_graph_graph_structure_comparison_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming smtbx_ab_initio_ext.so to smtbx_ab_initio_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming dxtbx_model_ext.so to dxtbx_model_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_eltbx_tiny_pse_ext.so to cctbx_eltbx_tiny_pse_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_anharmonic_ext.so to cctbx_anharmonic_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming scitbx_iso_surface_ext.so to scitbx_iso_surface_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming boost_adaptbx_boost_thread_test_ext.so to boost_adaptbx_boost_thread_test_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming gltbx_fonts_ext.so to gltbx_fonts_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_geometry_primitive_ext.so to mmtbx_geometry_primitive_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_dssp_ext.so to mmtbx_dssp_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming smtbx_array_family_ext.so to smtbx_array_family_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming iotbx_ccp4_map_ext.so to iotbx_ccp4_map_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming smtbx_refinement_least_squares_ext.so to smtbx_refinement_least_squares_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming boost_adaptbx_graph_metric_ext.so to boost_adaptbx_graph_metric_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_masks_ext.so to mmtbx_masks_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_sgtbx_ext.so to cctbx_sgtbx_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming dxtbx_ext.so to dxtbx_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming boost_python_meta_ext.so to boost_python_meta_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_emma_ext.so to cctbx_emma_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_maptbx_bcr_bcr_ext.so to cctbx_maptbx_bcr_bcr_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_tls_ext.so to mmtbx_tls_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_french_wilson_ext.so to cctbx_french_wilson_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_den_restraints_ext.so to mmtbx_den_restraints_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_covariance_ext.so to cctbx_covariance_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_maptbx_ext.so to cctbx_maptbx_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming scitbx_math_ext.so to scitbx_math_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_building_loop_closure_ext.so to mmtbx_building_loop_closure_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_statistics_ext.so to cctbx_statistics_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_reference_coordinate_ext.so to mmtbx_reference_coordinate_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_dmtbx_ext.so to cctbx_dmtbx_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_pair_interaction_ext.so to mmtbx_pair_interaction_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming smtbx_structure_factors_direct_ext.so to smtbx_structure_factors_direct_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_uctbx_ext.so to cctbx_uctbx_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming boost_rational_ext.so to boost_rational_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_max_lik_ext.so to mmtbx_max_lik_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_geometry_sphere_surface_sampling_ext.so to mmtbx_geometry_sphere_surface_sampling_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming boost_adaptbx_graph_ext.so to boost_adaptbx_graph_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_multipolar_ext.so to cctbx_multipolar_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming regression_test_ext.so to regression_test_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming iotbx_dsn6_map_ext.so to iotbx_dsn6_map_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_asymmetric_map_ext.so to cctbx_asymmetric_map_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming spotfinder_distltbx_ext.so to spotfinder_distltbx_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cma_es_ext.so to cma_es_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming rstbx_indexing_api_ext.so to rstbx_indexing_api_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_eltbx_xray_scattering_ext.so to cctbx_eltbx_xray_scattering_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_scaling_ext.so to mmtbx_scaling_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming scitbx_stl_vector_ext.so to scitbx_stl_vector_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming dxtbx_masking_ext.so to dxtbx_masking_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming dxtbx_imageset_ext.so to dxtbx_imageset_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming iotbx_detectors_bruker_ext.so to iotbx_detectors_bruker_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming smtbx_refinement_constraints_ext.so to smtbx_refinement_constraints_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_eltbx_covalent_radii_ext.so to cctbx_eltbx_covalent_radii_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming iotbx_mtz_ext.so to iotbx_mtz_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_alignment_ext.so to mmtbx_alignment_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming scitbx_rigid_body_ext.so to scitbx_rigid_body_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming boost_adaptbx_graph_min_cut_max_flow_ext.so to boost_adaptbx_graph_min_cut_max_flow_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming scitbx_fftpack_ext.so to scitbx_fftpack_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_eltbx_attenuation_coefficient_ext.so to cctbx_eltbx_attenuation_coefficient_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_bulk_solvent_ext.so to mmtbx_bulk_solvent_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_secondary_structure_ext.so to mmtbx_secondary_structure_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_utils_ext.so to mmtbx_utils_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_eltbx_sasaki_ext.so to cctbx_eltbx_sasaki_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming boost_optional_ext.so to boost_optional_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_hydrogens_ext.so to mmtbx_hydrogens_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming rstbx_simulation_ext.so to rstbx_simulation_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming fable_ext.so to fable_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_geometry_asa_ext.so to mmtbx_geometry_asa_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_eltbx_icsd_radii_ext.so to cctbx_eltbx_icsd_radii_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_reduce_ext.so to mmtbx_reduce_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming scitbx_lbfgsb_ext.so to scitbx_lbfgsb_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming boost_adaptbx_graph_maximum_clique_ext.so to boost_adaptbx_graph_maximum_clique_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming dxtbx_flumpy.so to dxtbx_flumpy.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming scitbx_linalg_ext.so to scitbx_linalg_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_geometry_shared_types_ext.so to mmtbx_geometry_shared_types_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming boost_tuple_ext.so to boost_tuple_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_sgtbx_asu_ext.so to cctbx_sgtbx_asu_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_f_model_ext.so to mmtbx_f_model_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_geometry_restraints_ext.so to cctbx_geometry_restraints_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming boost_adaptbx_graph_breadth_first_search_ext.so to boost_adaptbx_graph_breadth_first_search_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming iotbx_xplor_ext.so to iotbx_xplor_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming iotbx_cif_ext.so to iotbx_cif_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming iotbx_shelx_ext.so to iotbx_shelx_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming iotbx_pdb_hierarchy_ext.so to iotbx_pdb_hierarchy_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming rstbx_simage_ext.so to rstbx_simage_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming scitbx_glmtbx_ext.so to scitbx_glmtbx_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming rstbx_integration_ext.so to rstbx_integration_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming gltbx_util_ext.so to gltbx_util_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_xray_ext.so to cctbx_xray_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_eltbx_chemical_elements_ext.so to cctbx_eltbx_chemical_elements_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_cablam_align_utils_ext.so to mmtbx_cablam_align_utils_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming rstbx_diffraction_fastbragg_ext.so to rstbx_diffraction_fastbragg_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming spotfinder_dxtbx_ext.so to spotfinder_dxtbx_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming scitbx_r3_utils_ext.so to scitbx_r3_utils_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming scitbx_stl_map_ext.so to scitbx_stl_map_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming scitbx_lstbx_normal_equations_ext.so to scitbx_lstbx_normal_equations_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming scitbx_cubicle_neighbors_ext.so to scitbx_cubicle_neighbors_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_tls_optimise_amplitudes_ext.so to mmtbx_tls_optimise_amplitudes_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_tls_utils_ext.so to mmtbx_tls_utils_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming spotfinder_hough_ext.so to spotfinder_hough_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_adp_restraints_ext.so to cctbx_adp_restraints_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_rotamer_fit_ext.so to mmtbx_rotamer_fit_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_ncs_ext.so to mmtbx_ncs_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming iotbx_detectors_ext.so to iotbx_detectors_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming iotbx_wildcard_ext.so to iotbx_wildcard_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_geometry_clash_ext.so to mmtbx_geometry_clash_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming gltbx_glu_ext.so to gltbx_glu_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming scitbx_lbfgs_ext.so to scitbx_lbfgs_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_rsr_ext.so to mmtbx_rsr_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming mmtbx_ncs_cartesian_restraints_ext.so to mmtbx_ncs_cartesian_restraints_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming annlib_ext.so to annlib_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming boost_adaptbx_graph_clustering_algorithm_ext.so to boost_adaptbx_graph_clustering_algorithm_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cbflib_ext.so to cbflib_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming gltbx_quadrics_ext.so to gltbx_quadrics_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming scitbx_minpack_ext.so to scitbx_minpack_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming scitbx_suffixtree_single_ext.so to scitbx_suffixtree_single_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_eltbx_fp_fdp_ext.so to cctbx_eltbx_fp_fdp_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming rstbx_bpcx_detector_model_ext.so to rstbx_bpcx_detector_model_ext.cpython-312-s390x-linux-gnu.so I: dh_python3 fs:431: renaming cctbx_miller_ext.so to cctbx_miller_ext.cpython-312-s390x-linux-gnu.so D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.reflection_file_reader): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.HKLviewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.flipbase): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.suitename_old): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.plot_detector_models): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.reciprocal_space_arrays): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.unique_with_biomt): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.fft): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.helix_sheet_recs_as_pdb_files): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cbf_read): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cablam_validate): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.diffuse): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rna_validate_suites): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.scons): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.xtriage_gui): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.feature_enhanced_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.insert_write_at_start_of_each_procedure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.simple_map_coefficients): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.nequal): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rna_validate): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.install): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.divide_by_zero): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.mtz.dump): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dev.dxtbx.debug_memory): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif_as_pdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.install_format): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.chiral_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.dano_as_amplitudes): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.fix_rotamer_outliers): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_unused_imports): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif.as_miller_arrays): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.git_avoid_merges): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.extend_sidechains): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbflib.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.model_vs_sequence): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.comparama): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.f000): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.example_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.clear_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.install_conda): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.wavelength_units): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.tcsh): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.reindex): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/annlib.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cma_es.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_python_sys_executable): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.refine): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.model_vs_data): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.remote_processing): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.suitename): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_bin_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.model_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.kinemage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_numpy_version): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.symmetry_search): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.mp_validate_bonds): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.lattice_symmetry): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.structure_factor_timings): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.altloc_remediate): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.show_systematic_absences): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.rebuild_cablam_cache): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.anomalous_differences_histogram): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.HKLinfo): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.unicode_examples): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.patterson_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.find_residue_in_pdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.image_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.refine_anomalous_substructure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.map_comparison): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.xplor.map.show_summary): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.shelx.as_xray_structure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.benchmark_refinement): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fetch_pdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb_remediator): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.maximum_entropy_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.tls_analysis): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.validate_ligands): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.dlsnxs2cbf): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.qttbx.view_structure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.file_reader): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phasertng.HKLviewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.sge_qstat_counts): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.models_as_chains): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.unpack_in_sources): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.latex): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.thin_client): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.super): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.sisa): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.visualize_r_factors): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.csh): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.sge_available_slots): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.depends_on): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.emringer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.flip_symmetric_amino_acids): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx_regression.test_nightly): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rna_validate_bonds): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/spotfinder.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.simage.solver): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbflib.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.export_scalepack_unmerged): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/gltbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.show_suspicious_residues): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fem): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.chiral_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.refresh): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.rama_z): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/omptbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.cablam): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.water_b_factors): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/samosa.scale): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.r_free_flags_accumulation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_under_build): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.perigee): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.analyse_code_comments): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_stdin_contains_strings): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.nonbonded_overlaps): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.mp_spotfinder_server_read_file): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.list_source_files_sorted_by_size): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bibtex): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.find_tls_groups): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.hbond): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cbetadev): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.xmanip): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_env): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.dtrek.to_cns): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.seconds_since_the_epoch): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.get_related_ensemble): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.model_vs_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/omptbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.matthews): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.ringer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_variable_names): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.r_factor_statistics): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.form_factor_query): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/gltbx.try_imports): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.map_box): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.generate_error_h): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.split_data_cif): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb_interpretation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.dtrace): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.start_process): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.diffuse): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.validate_H): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_commands): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_repository_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.barbed_wire_analysis): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.subgroups): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.dynamics): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.show_environ_usage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.find_active_area): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cablam_idealization): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.chains_as_models): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_unused_imports_crude): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.tls_as_xyz): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.analyze_peptides): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.epydoc_run): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/gltbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.masks): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_registry): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.fmodel_simple): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx_blobs): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.explore_metric_symmetry): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.massage_data): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.absolute_structure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.find_peaks_holes): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.reflection_file_converter): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.french_wilson): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cxi.image_average): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.pdb_interpretation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.verify_mon_lib_data): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb_as_fasta): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fake_f_obs): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.grow_density): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/ccp4io.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.superpose_atoms_by_name): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.probescore_ligand): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.evalurama): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.afitt_fd): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif.validate): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.join_fragment_files): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.fetch_pdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_include_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.poscar_as_xray_structure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_cctbx_bundle_for_installer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.simulate_low_res_data): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rotalyze): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.clashscore): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.prune_model): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rna_validate): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.get_citation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb_as_cif): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/sphinx.build): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.any2unix): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bootstrap): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.select_best_starting_model): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.double_overflow): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb.b_factor_stats): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.phil): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_in_repositories): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.compare_datasets): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb_labels_comparison): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.maps): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.superpose_centers_of_mass): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.read): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.cout): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.web.install): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.show_exp_times): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rna_validate_puckers): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.make_sphinx_html): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_build_options): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.distance_least_squares): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.show_platform_info): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/gltbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_reserved_names): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_line_count): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.rebuild_rotarama_cache): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.cod_select_and_pickle): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/ccp4io.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/samosa.join): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.image2pickle): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.image_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.check_libcpp): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.partial_omit_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_mac_app): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.bfactor_plot): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_selfx): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.ramalyze): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.pdb_statistics): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.data_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.euclidean_model_matching): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.loggraph): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_all_on_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.distance_difference): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/labelit.png): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb_editor): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.printenv): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.ss_idealization): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.py_compile_all): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.mp_validate_bonds): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.density_modification): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.prepare_pdb_deposition): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.get_pubmed_citation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbflib.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.segmentation_fault): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.kinemage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/ccp4io.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.reflection_statistics): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.clashscore): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.mtz.dump): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.angle): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.emringer_score): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_but_no_repr): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cns.sdb_reader): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.image_average): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.quantum_interface): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.afitt): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.map_to_structure_factors): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.validate_waters): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.HKLviewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.brehm_diederichs): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.lcm): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.process_predicted_model): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.int_overflow): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.overload): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.barbed_wire_analysis): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.resolution): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.geometry_minimization): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.aev): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.shelx.as_cif): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.development.ntc_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.HKLinfo): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.omegalyze): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.plan_sad_experiment): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.suitename_old): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cif_as_pdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.display_parallax_correction): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb_atom_selection): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbflib.tst_memory): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.merging_statistics): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.real_space_diff_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.hydrogenate): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bundle_as_selfx): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cns.transfer_crystal_symmetry): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.emma): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.wxpython): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.csv_as_mtz): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cablam_training): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb_labels_diff): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_mask_info): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.show_r_factors_by_shell): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.mon_lib_cif_triage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.remove_outliers): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.nested_cpp_loops_with_check_signals): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.gcd): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.arginine_geometry): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.strip_model): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_numeric_version): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.image_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.chunk): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.list_files): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cma_es.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbf.dump): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.help): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.superpose): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.simage.explore_completeness): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb.hierarchy): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.r_free_flags_as_cns): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/serialtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_old_style_classes): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.simage.wx_display): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.remove_tree): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.box_around_molecule): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cns.reflection_reader): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdbtools): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_number_of_processors): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.ssm_rmsd_for_chains): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.as_xray_structure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rotalyze): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.emma): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.isomorphous_difference_patterson): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.import_all_python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif_as_mtz): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.model_vs_sequence): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.inspect_r_free_flags): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.list_modules): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_module_dependencies): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.molprobity): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fest): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.ramalyze): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.auto_sharpen): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.search_pdb_symmetry): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_stdin_does_not_contain_strings): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.plot_anomalous_scattering): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_environ_usage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/annlib.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.real_space_correlation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.add_from_future_import_division): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.r_free_flags_completion_simple): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.suitename_old): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.tls): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.undowser_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.simage.create): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.inexact): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.prime_factors_of): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.apply_ncs_to_ligand): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/serialtbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_stdin): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.split): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.add_conformations): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.sort_atoms): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.run_tests_parallel): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.model_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.wait_for_file): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.validate_ions): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.french_wilson): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.sort_hetatms): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.model_idealization): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.merging_statistics): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.compute_map_coefficients): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.sweep_strength): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_pythonpath): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.blast_pdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_tests): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.table_one): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.plan_sad_experiment): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_python_dependencies): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.pdb_view_ad_hoc): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.show_calls): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rank_scale_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_host_and_user): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.polder): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.segment_and_split_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rama_z): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_untested): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.data_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.path_utility): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.signal_strength): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.secondary_structure_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif.as_xray_structure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.find_reticular_twin_laws): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.reflection_file_converter): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.split_models): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_full_command_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bundle_as_exe): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.molprobity): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rna_validate_suites): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.exec): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/omptbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/serialtbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fft): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.crystal_symmetry_from_any): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.run_pickled_function): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.precession_view): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.rigid_bond_test): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cma_es.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_install_script_bat): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dev.dxtbx.read_sequence): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_installer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_matching_formats): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.find_distances): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.version): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/annlib.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.gdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.find_peaks_holes): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.validation_summary): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.eltbx.show_fp_fdp): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cc_star): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/spotfinder.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.anom_refine): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.mtz2map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fab_elbow_angle): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.clean_clutter): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.secondary_structure_restraints): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.show_connectivity): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.reflection_file_editor): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.xtriage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.raise_exception_for_testing): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.print_matching_images): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.mtz_as_cif): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.easy_qsub): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_windows_exe): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb.mtrix_reconstruction): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.parallel_simple): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_not_show_diff): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.saturation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_stdin_ends_with): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.print_header): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rna_validate_puckers): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.xtriage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_files): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.import_all_ext): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.pdflatex): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.multiplicity_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.build_phil_cache): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.shelx.dump_as_python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.sh): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fobs_minus_fobs_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.histogram): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.suitename): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.omegalyze): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.reduce2): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rna_validate_bonds): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cns_as_mtz): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.index): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.anneal_real_space): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.make_dist): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.print_sequence): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.show_sizes): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_lib_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.extract_code_from_txt): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.line_count): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fmodel): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.undowser_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.show_file_info): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.xray_structure.show): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.detector_superpose): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.getting_started): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.env_run): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.map_to_model_histogram): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.phil): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.xtriage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.analyze_static_disorder): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.process_predicted_model): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.estimate_bijvoet_ratio): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.valgrind): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_clutter): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cif_as_mtz): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cablam): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_unzipsfx): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.link_as_geometry_restraints_edits): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.mp_geo): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb.biomt_reconstruction): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bash): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.fix_rama_outliers): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cxi.image2pickle): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.fem_include_search_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.space_group_info): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.cbetadev): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/spotfinder.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.insert_scale_records): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.suitename): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.probe2): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.radial_average): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.configure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_date_and_time): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.water_screen): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.model_model_distances): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.apply_tapenade_hints): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.make_install_HKLviewer_ChimeraX): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.compare_ligands): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.unique_with_biomt): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.mask): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.show_distances): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.start_binary_bundle): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.cdl_lookup): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.monomer_library.comp_as_motif): doesn't look like a shebang: #! /bin/sh D: dh_python3 fs:348: package python3-cctbx details = {'requires.txt': {'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx-2023.12.egg-info/requires.txt'}, 'egg-info': {'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx-2023.12.egg-info/PKG-INFO', 'debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx-3.17.0.egg-info/PKG-INFO'}, 'dist-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('3.12')}, 'ext_no_version': set()} D: dh_python3 depends:117: generating dependencies for package python3-cctbx D: dh_python3 pydist:173: trying to find dependency for PIL (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:270: dependency: included in build-deps D: dh_python3 pydist:173: trying to find dependency for h5py (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:263: dependency: included in build-deps with limits D: dh_python3 pydist:173: trying to find dependency for matplotlib (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:270: dependency: included in build-deps D: dh_python3 pydist:173: trying to find dependency for mrcfile (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:270: dependency: included in build-deps D: dh_python3 pydist:173: trying to find dependency for numpy (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:270: dependency: included in build-deps D: dh_python3 pydist:173: trying to find dependency for nxmx (python=None) D: dh_python3 pydist:277: invoking dpkg -S *python3/*/[Nn][Xx][Mm][Xx]-?*.*-info D: dh_python3 pydist:296: dependency: found a result with dpkg -S D: dh_python3 pydist:173: trying to find dependency for orderedset (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:270: dependency: included in build-deps D: dh_python3 pydist:173: trying to find dependency for pint (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:270: dependency: included in build-deps D: dh_python3 pydist:173: trying to find dependency for procrunner (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:270: dependency: included in build-deps D: dh_python3 pydist:173: trying to find dependency for pymol (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:270: dependency: included in build-deps D: dh_python3 pydist:173: trying to find dependency for requests (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:270: dependency: included in build-deps D: dh_python3 pydist:173: trying to find dependency for scipy (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:270: dependency: included in build-deps D: dh_python3 pydist:173: trying to find dependency for six (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:270: dependency: included in build-deps D: dh_python3 pydist:173: trying to find dependency for tqdm (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:270: dependency: included in build-deps D: dh_python3 pydist:173: trying to find dependency for wxPython (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:270: dependency: included in build-deps D: dh_python3 depends:284: D={'python3-scipy', 'python3-requests', 'python3-mrcfile', 'python3-nxmx', 'python3-six', 'python3-wxgtk4.0', 'python3 (<< 3.13)', 'python3-matplotlib', 'python3-h5py (>= 3)', 'python3 (>= 3.12~)', 'python3-tqdm', 'python3-pint', 'python3-pil', 'python3-procrunner', 'python3:any', 'python3-pymol', 'python3-numpy', 'python3-orderedset'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_installsystemduser -a -O--buildsystem=pybuild dh_lintian -a -O--buildsystem=pybuild install -m0755 -d debian/python3-cctbx/usr/share/lintian/overrides install -p -m0644 debian/python3-cctbx.lintian-overrides debian/python3-cctbx/usr/share/lintian/overrides/python3-cctbx dh_perl -a -O--buildsystem=pybuild rm -f debian/libcctbx-dev.debhelper.log debian/libcctbx0.debhelper.log debian/python3-cctbx.debhelper.log debian/rules override_dh_link make[1]: Entering directory '/<>' dh_auto_build -- -s custom --build-args="dh_link -p libcctbx-dev usr/include/cctbx usr/lib/cctbx/python{version}/include" pybuild --build -i python{version} -p 3.12 -s custom "--build-args=dh_link -p libcctbx-dev usr/include/cctbx usr/lib/cctbx/python{version}/include" I: pybuild base:305: dh_link -p libcctbx-dev usr/include/cctbx usr/lib/cctbx/python3.12/include rm -f debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libiotbx_pdb.so ln -s libiotbx_pdb.so.0.0.1 debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libiotbx_pdb.so rm -f debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libmmtbx_masks.so ln -s libmmtbx_masks.so.0.0.1 debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libmmtbx_masks.so rm -f debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libcbf-private.so ln -s libcbf-private.so.0.0.1 debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libcbf-private.so rm -f debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libscitbx_slatec.so ln -s libscitbx_slatec.so.0.0.1 debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libscitbx_slatec.so rm -f debian/libcctbx-dev/usr/lib/s390x-linux-gnu/librstbx.so ln -s librstbx.so.0.0.1 debian/libcctbx-dev/usr/lib/s390x-linux-gnu/librstbx.so rm -f debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libcctbx.so ln -s libcctbx.so.0.0.1 debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libcctbx.so rm -f debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libsmtbx_refinement_constraints.so ln -s libsmtbx_refinement_constraints.so.0.0.1 debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libsmtbx_refinement_constraints.so rm -f debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libann_adaptor.so ln -s libann_adaptor.so.0.0.1 debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libann_adaptor.so rm -f debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libcctbx_sgtbx_asu.so ln -s libcctbx_sgtbx_asu.so.0.0.1 debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libcctbx_sgtbx_asu.so rm -f debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libdxtbxspotfinder.so ln -s libdxtbxspotfinder.so.0.0.1 debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libdxtbxspotfinder.so rm -f debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libspotfinder.so ln -s libspotfinder.so.0.0.1 debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libspotfinder.so rm -f debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libiotbx_xplor.so ln -s libiotbx_xplor.so.0.0.1 debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libiotbx_xplor.so rm -f debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libasymmetric_map.so ln -s libasymmetric_map.so.0.0.1 debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libasymmetric_map.so rm -f debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libmmtbx_tls.so ln -s libmmtbx_tls.so.0.0.1 debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libmmtbx_tls.so rm -f debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libscitbx_minpack.so ln -s libscitbx_minpack.so.0.0.1 debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libscitbx_minpack.so rm -f debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libscitbx_boost_python.so ln -s libscitbx_boost_python.so.0.0.1 debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libscitbx_boost_python.so rm -f debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libiotbx_mtz.so ln -s libiotbx_mtz.so.0.0.1 debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libiotbx_mtz.so rm -f debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libccp4io.so ln -s libccp4io.so.0.0.1 debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libccp4io.so rm -f debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libomptbx.so ln -s libomptbx.so.0.0.1 debian/libcctbx-dev/usr/lib/s390x-linux-gnu/libomptbx.so install -m0755 -d debian/libcctbx-dev/usr/lib/cctbx/python3.12 rm -f debian/libcctbx-dev/usr/lib/cctbx/python3.12/include ln -s ../../../include/cctbx debian/libcctbx-dev/usr/lib/cctbx/python3.12/include make[1]: Leaving directory '/<>' dh_strip_nondeterminism -a -O--buildsystem=pybuild Using 1711907205 as canonical time Normalizing debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx/bioinformatics/test/ncbi_blast.xml.gz using File::StripNondeterminism::handlers::gzip Normalizing debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx/bioinformatics/test/ebi_blast.xml.gz using File::StripNondeterminism::handlers::gzip dh_compress -a -O--buildsystem=pybuild cd debian/libcctbx0 cd debian/libcctbx-dev cd debian/python3-cctbx chmod a-x usr/share/doc/libcctbx-dev/changelog.Debian chmod a-x usr/share/doc/python3-cctbx/changelog.Debian chmod a-x usr/share/doc/libcctbx0/changelog.Debian gzip -9nf usr/share/doc/python3-cctbx/changelog.Debian gzip -9nf usr/share/doc/libcctbx-dev/changelog.Debian gzip -9nf usr/share/doc/libcctbx0/changelog.Debian cd '/<>' cd '/<>' cd '/<>' dh_fixperms -a -O--buildsystem=pybuild find debian/libcctbx0 ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libcctbx-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python3-cctbx ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libcctbx0/usr/share/doc -type f -a -true -a ! -regex 'debian/libcctbx0/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcctbx0/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libcctbx-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libcctbx-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcctbx0 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcctbx-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libcctbx0/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/libcctbx-dev/usr/include -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcctbx-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcctbx-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/python3-cctbx/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-cctbx/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-cctbx/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-cctbx/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-cctbx -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-cctbx/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/python3-cctbx/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing -a -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild install -m0755 -d debian/libcctbx0/usr/lib/debug/.dwz/s390x-linux-gnu dwz -mdebian/libcctbx0/usr/lib/debug/.dwz/s390x-linux-gnu/libcctbx0.debug -M/usr/lib/debug/.dwz/s390x-linux-gnu/libcctbx0.debug -- debian/libcctbx0/usr/lib/s390x-linux-gnu/libann_adaptor.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libasymmetric_map.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libcbf-private.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libccp4io.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libcctbx.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libdxtbxspotfinder.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_mtz.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_pdb.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_xplor.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libmmtbx_masks.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libmmtbx_tls.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libomptbx.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/librstbx.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_boost_python.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_minpack.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_slatec.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libspotfinder.so.0.0.1 install -m0755 -d debian/python3-cctbx/usr/lib/debug/.dwz/s390x-linux-gnu dwz -mdebian/python3-cctbx/usr/lib/debug/.dwz/s390x-linux-gnu/python3-cctbx.debug -M/usr/lib/debug/.dwz/s390x-linux-gnu/python3-cctbx.debug -- debian/python3-cctbx/usr/bin/cbflib.tst_memory debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib debian/python3-cctbx/usr/bin/cctbx.find_distances debian/python3-cctbx/usr/bin/cctbx.getting_started debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups debian/python3-cctbx/usr/bin/cctbx_blobs debian/python3-cctbx/usr/lib/cctbx/python3.12/boost_adaptbx/tests/tst_optional_copy debian/python3-cctbx/usr/lib/cctbx/python3.12/iotbx/pdb/hybrid_36_fem debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_accessors debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_1 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_2 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_3 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_4 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_5 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_mat3 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_optional_copy debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_rectangular_full_packed debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_ref_matrix_facet debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_sym_mat3 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_unsigned_float_arithmetic debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_vec3 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/error/tst_error debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/lbfgs/tst_lbfgs debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/math/tests/tst debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_cholesky debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_givens debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_householder debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_svd debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/serialization/tst_base_256 debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_reparametrisation debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_special_position debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_cablam_align_utils_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-312-s390x-linux-gnu.so objcopy --compress-debug-sections debian/libcctbx0/usr/lib/debug/.dwz/s390x-linux-gnu/libcctbx0.debug chmod 0644 -- debian/libcctbx0/usr/lib/debug/.dwz/s390x-linux-gnu/libcctbx0.debug objcopy --compress-debug-sections debian/python3-cctbx/usr/lib/debug/.dwz/s390x-linux-gnu/python3-cctbx.debug chmod 0644 -- debian/python3-cctbx/usr/lib/debug/.dwz/s390x-linux-gnu/python3-cctbx.debug dh_strip -a -O--buildsystem=pybuild debugedit --build-id --build-id-seed=libcctbx0/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/libcctbx0/usr/lib/s390x-linux-gnu/librstbx.so.0.0.1 debugedit: debian/libcctbx0/usr/lib/s390x-linux-gnu/librstbx.so.0.0.1: Unknown DWARF DW_FORM_0x1f21 b71ede0000ed5fea944e9f7ade6e6d9ca103cb59 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/b7 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/s390x-linux-gnu/librstbx.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/b7/1ede0000ed5fea944e9f7ade6e6d9ca103cb59.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/b7/1ede0000ed5fea944e9f7ade6e6d9ca103cb59.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/WKaSFOrHRw/stripjtsXPP debian/libcctbx0/usr/lib/s390x-linux-gnu/librstbx.so.0.0.1 chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/librstbx.so.0.0.1 /tmp/WKaSFOrHRw/stripjtsXPP cat '/tmp/WKaSFOrHRw/stripjtsXPP' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/librstbx.so.0.0.1' chmod --reference /tmp/WKaSFOrHRw/stripjtsXPP debian/libcctbx0/usr/lib/s390x-linux-gnu/librstbx.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/b7/1ede0000ed5fea944e9f7ade6e6d9ca103cb59.debug debian/libcctbx0/usr/lib/s390x-linux-gnu/librstbx.so.0.0.1 /tmp/WKaSFOrHRw/objcopykNBqpP chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/librstbx.so.0.0.1 /tmp/WKaSFOrHRw/objcopykNBqpP cat '/tmp/WKaSFOrHRw/objcopykNBqpP' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/librstbx.so.0.0.1' chmod --reference /tmp/WKaSFOrHRw/objcopykNBqpP debian/libcctbx0/usr/lib/s390x-linux-gnu/librstbx.so.0.0.1 debugedit --build-id --build-id-seed=libcctbx0/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_minpack.so.0.0.1 debugedit: debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_minpack.so.0.0.1: Unknown DWARF DW_FORM_0x1f20 303deb192d57fc582a1d79519be1dca70576bb88 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/30 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_minpack.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/30/3deb192d57fc582a1d79519be1dca70576bb88.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/30/3deb192d57fc582a1d79519be1dca70576bb88.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/WKaSFOrHRw/stripGRB1bc debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_minpack.so.0.0.1 chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_minpack.so.0.0.1 /tmp/WKaSFOrHRw/stripGRB1bc cat '/tmp/WKaSFOrHRw/stripGRB1bc' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_minpack.so.0.0.1' chmod --reference /tmp/WKaSFOrHRw/stripGRB1bc debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_minpack.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/30/3deb192d57fc582a1d79519be1dca70576bb88.debug debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_minpack.so.0.0.1 /tmp/WKaSFOrHRw/objcopyBFmkVo chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_minpack.so.0.0.1 /tmp/WKaSFOrHRw/objcopyBFmkVo cat '/tmp/WKaSFOrHRw/objcopyBFmkVo' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_minpack.so.0.0.1' chmod --reference /tmp/WKaSFOrHRw/objcopyBFmkVo debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_minpack.so.0.0.1 debugedit --build-id --build-id-seed=libcctbx0/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/libcctbx0/usr/lib/s390x-linux-gnu/libomptbx.so.0.0.1 debugedit: debian/libcctbx0/usr/lib/s390x-linux-gnu/libomptbx.so.0.0.1: Unknown DWARF DW_FORM_0x1f20 16306f708a983c29407380995e1f446b844d969f install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/16 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/s390x-linux-gnu/libomptbx.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/16/306f708a983c29407380995e1f446b844d969f.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/16/306f708a983c29407380995e1f446b844d969f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/WKaSFOrHRw/stripSQk1_m debian/libcctbx0/usr/lib/s390x-linux-gnu/libomptbx.so.0.0.1 chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libomptbx.so.0.0.1 /tmp/WKaSFOrHRw/stripSQk1_m cat '/tmp/WKaSFOrHRw/stripSQk1_m' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libomptbx.so.0.0.1' chmod --reference /tmp/WKaSFOrHRw/stripSQk1_m debian/libcctbx0/usr/lib/s390x-linux-gnu/libomptbx.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/16/306f708a983c29407380995e1f446b844d969f.debug debian/libcctbx0/usr/lib/s390x-linux-gnu/libomptbx.so.0.0.1 /tmp/WKaSFOrHRw/objcopyxScmBF chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libomptbx.so.0.0.1 /tmp/WKaSFOrHRw/objcopyxScmBF cat '/tmp/WKaSFOrHRw/objcopyxScmBF' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libomptbx.so.0.0.1' debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_cablam_align_utils_ext.cpython-312-s390x-linux-gnu.so chmod --reference /tmp/WKaSFOrHRw/objcopyxScmBF debian/libcctbx0/usr/lib/s390x-linux-gnu/libomptbx.so.0.0.1 debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_cablam_align_utils_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 b7e1975bfc6956d15c695682d61b455ca1456eb9 debugedit --build-id --build-id-seed=libcctbx0/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_mtz.so.0.0.1 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b7 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_cablam_align_utils_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b7/e1975bfc6956d15c695682d61b455ca1456eb9.debug debugedit: debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_mtz.so.0.0.1: Unknown DWARF DW_FORM_0x1f21 fc3362e3a66234f5a85a5e37fecd724da5e28415 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/fc objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_mtz.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/fc/3362e3a66234f5a85a5e37fecd724da5e28415.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b7/e1975bfc6956d15c695682d61b455ca1456eb9.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripFXgbWk debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_cablam_align_utils_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_cablam_align_utils_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripFXgbWk cat '/tmp/MDcnXHegrm/stripFXgbWk' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_cablam_align_utils_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripFXgbWk debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_cablam_align_utils_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b7/e1975bfc6956d15c695682d61b455ca1456eb9.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_cablam_align_utils_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyGaAOqH chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_cablam_align_utils_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyGaAOqH cat '/tmp/MDcnXHegrm/objcopyGaAOqH' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_cablam_align_utils_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyGaAOqH debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_cablam_align_utils_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/fc/3362e3a66234f5a85a5e37fecd724da5e28415.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/WKaSFOrHRw/stripktjZMv debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_mtz.so.0.0.1 chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_mtz.so.0.0.1 /tmp/WKaSFOrHRw/stripktjZMv cat '/tmp/WKaSFOrHRw/stripktjZMv' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_mtz.so.0.0.1' chmod --reference /tmp/WKaSFOrHRw/stripktjZMv debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_mtz.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/fc/3362e3a66234f5a85a5e37fecd724da5e28415.debug debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_mtz.so.0.0.1 /tmp/WKaSFOrHRw/objcopy9P5dNS aca741c1aabe9edc540e5d1645e0170f12c11934 chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_mtz.so.0.0.1 /tmp/WKaSFOrHRw/objcopy9P5dNS cat '/tmp/WKaSFOrHRw/objcopy9P5dNS' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_mtz.so.0.0.1' chmod --reference /tmp/WKaSFOrHRw/objcopy9P5dNS debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_mtz.so.0.0.1 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ac objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ac/a741c1aabe9edc540e5d1645e0170f12c11934.debug debugedit --build-id --build-id-seed=libcctbx0/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/libcctbx0/usr/lib/s390x-linux-gnu/libcbf-private.so.0.0.1 debugedit: debian/libcctbx0/usr/lib/s390x-linux-gnu/libcbf-private.so.0.0.1: Unknown DWARF DW_FORM_0x1f20 1985c6b98fd265caf946cbf5ab73b832f0840859 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/19 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/s390x-linux-gnu/libcbf-private.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/19/85c6b98fd265caf946cbf5ab73b832f0840859.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/19/85c6b98fd265caf946cbf5ab73b832f0840859.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/WKaSFOrHRw/stripa9USRa debian/libcctbx0/usr/lib/s390x-linux-gnu/libcbf-private.so.0.0.1 chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libcbf-private.so.0.0.1 /tmp/WKaSFOrHRw/stripa9USRa cat '/tmp/WKaSFOrHRw/stripa9USRa' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libcbf-private.so.0.0.1' chmod --reference /tmp/WKaSFOrHRw/stripa9USRa debian/libcctbx0/usr/lib/s390x-linux-gnu/libcbf-private.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/19/85c6b98fd265caf946cbf5ab73b832f0840859.debug debian/libcctbx0/usr/lib/s390x-linux-gnu/libcbf-private.so.0.0.1 /tmp/WKaSFOrHRw/objcopyDcnWvm chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libcbf-private.so.0.0.1 /tmp/WKaSFOrHRw/objcopyDcnWvm cat '/tmp/WKaSFOrHRw/objcopyDcnWvm' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libcbf-private.so.0.0.1' chmod --reference /tmp/WKaSFOrHRw/objcopyDcnWvm debian/libcctbx0/usr/lib/s390x-linux-gnu/libcbf-private.so.0.0.1 debugedit --build-id --build-id-seed=libcctbx0/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/libcctbx0/usr/lib/s390x-linux-gnu/libcctbx.so.0.0.1 debugedit: debian/libcctbx0/usr/lib/s390x-linux-gnu/libcctbx.so.0.0.1: Unknown DWARF DW_FORM_0x1f21 2b18f02ff6aabf6df095a2af0a94536470e8d062 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/2b objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/s390x-linux-gnu/libcctbx.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/2b/18f02ff6aabf6df095a2af0a94536470e8d062.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ac/a741c1aabe9edc540e5d1645e0170f12c11934.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripnJWYx6 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripnJWYx6 cat '/tmp/MDcnXHegrm/stripnJWYx6' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripnJWYx6 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ac/a741c1aabe9edc540e5d1645e0170f12c11934.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy7tNBDO chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy7tNBDO cat '/tmp/MDcnXHegrm/objcopy7tNBDO' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy7tNBDO debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 e731faddb085475aba91a046752f100790cd1042 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e7 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e7/31faddb085475aba91a046752f100790cd1042.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e7/31faddb085475aba91a046752f100790cd1042.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripDeWMub debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripDeWMub cat '/tmp/MDcnXHegrm/stripDeWMub' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripDeWMub debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e7/31faddb085475aba91a046752f100790cd1042.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyNuk6pN chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyNuk6pN cat '/tmp/MDcnXHegrm/objcopyNuk6pN' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyNuk6pN debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 9a7ad33697736a78a6ce08084ae44a196d114e26 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9a/7ad33697736a78a6ce08084ae44a196d114e26.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9a/7ad33697736a78a6ce08084ae44a196d114e26.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripvu10o8 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripvu10o8 cat '/tmp/MDcnXHegrm/stripvu10o8' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripvu10o8 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9a/7ad33697736a78a6ce08084ae44a196d114e26.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyGAsdgd chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyGAsdgd cat '/tmp/MDcnXHegrm/objcopyGAsdgd' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyGAsdgd debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 ab4a11b0698bee9df944416cc8cc8d047676c251 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ab objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ab/4a11b0698bee9df944416cc8cc8d047676c251.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/2b/18f02ff6aabf6df095a2af0a94536470e8d062.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/WKaSFOrHRw/stripxaJNS6 debian/libcctbx0/usr/lib/s390x-linux-gnu/libcctbx.so.0.0.1 chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ab/4a11b0698bee9df944416cc8cc8d047676c251.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/striprhQkY6 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/striprhQkY6 cat '/tmp/MDcnXHegrm/striprhQkY6' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/striprhQkY6 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ab/4a11b0698bee9df944416cc8cc8d047676c251.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy3Kq6YF chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libcctbx.so.0.0.1 /tmp/WKaSFOrHRw/stripxaJNS6 cat '/tmp/WKaSFOrHRw/stripxaJNS6' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libcctbx.so.0.0.1' chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy3Kq6YF cat '/tmp/MDcnXHegrm/objcopy3Kq6YF' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy3Kq6YF debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-312-s390x-linux-gnu.so chmod --reference /tmp/WKaSFOrHRw/stripxaJNS6 debian/libcctbx0/usr/lib/s390x-linux-gnu/libcctbx.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/2b/18f02ff6aabf6df095a2af0a94536470e8d062.debug debian/libcctbx0/usr/lib/s390x-linux-gnu/libcctbx.so.0.0.1 /tmp/WKaSFOrHRw/objcopyZMZGQm debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libcctbx.so.0.0.1 /tmp/WKaSFOrHRw/objcopyZMZGQm cat '/tmp/WKaSFOrHRw/objcopyZMZGQm' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libcctbx.so.0.0.1' 9ac6b692e3f720f0b1d0ab0db85f1f297d565903 chmod --reference /tmp/WKaSFOrHRw/objcopyZMZGQm debian/libcctbx0/usr/lib/s390x-linux-gnu/libcctbx.so.0.0.1 debugedit --build-id --build-id-seed=libcctbx0/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_slatec.so.0.0.1 debugedit: debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_slatec.so.0.0.1: Unknown DWARF DW_FORM_0x1f21 a8acb2329a928dbe5d9212a584da875d70f14393 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9a/c6b692e3f720f0b1d0ab0db85f1f297d565903.debug install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/a8 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_slatec.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/a8/acb2329a928dbe5d9212a584da875d70f14393.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/a8/acb2329a928dbe5d9212a584da875d70f14393.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/WKaSFOrHRw/stripODT4jK debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_slatec.so.0.0.1 chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_slatec.so.0.0.1 /tmp/WKaSFOrHRw/stripODT4jK cat '/tmp/WKaSFOrHRw/stripODT4jK' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_slatec.so.0.0.1' chmod --reference /tmp/WKaSFOrHRw/stripODT4jK debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_slatec.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/a8/acb2329a928dbe5d9212a584da875d70f14393.debug debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_slatec.so.0.0.1 /tmp/WKaSFOrHRw/objcopyWPmuJQ chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_slatec.so.0.0.1 /tmp/WKaSFOrHRw/objcopyWPmuJQ cat '/tmp/WKaSFOrHRw/objcopyWPmuJQ' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_slatec.so.0.0.1' chmod --reference /tmp/WKaSFOrHRw/objcopyWPmuJQ debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_slatec.so.0.0.1 debugedit --build-id --build-id-seed=libcctbx0/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/libcctbx0/usr/lib/s390x-linux-gnu/libccp4io.so.0.0.1 debugedit: debian/libcctbx0/usr/lib/s390x-linux-gnu/libccp4io.so.0.0.1: Unknown DWARF DW_FORM_0x1f21 072dc9711be5a72a2ae97df1e83fe900ce815a89 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/07 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/s390x-linux-gnu/libccp4io.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/07/2dc9711be5a72a2ae97df1e83fe900ce815a89.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/07/2dc9711be5a72a2ae97df1e83fe900ce815a89.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/WKaSFOrHRw/stripAZ4S34 debian/libcctbx0/usr/lib/s390x-linux-gnu/libccp4io.so.0.0.1 chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libccp4io.so.0.0.1 /tmp/WKaSFOrHRw/stripAZ4S34 cat '/tmp/WKaSFOrHRw/stripAZ4S34' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libccp4io.so.0.0.1' chmod --reference /tmp/WKaSFOrHRw/stripAZ4S34 debian/libcctbx0/usr/lib/s390x-linux-gnu/libccp4io.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/07/2dc9711be5a72a2ae97df1e83fe900ce815a89.debug debian/libcctbx0/usr/lib/s390x-linux-gnu/libccp4io.so.0.0.1 /tmp/WKaSFOrHRw/objcopy0sNrNh chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libccp4io.so.0.0.1 /tmp/WKaSFOrHRw/objcopy0sNrNh cat '/tmp/WKaSFOrHRw/objcopy0sNrNh' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libccp4io.so.0.0.1' chmod --reference /tmp/WKaSFOrHRw/objcopy0sNrNh debian/libcctbx0/usr/lib/s390x-linux-gnu/libccp4io.so.0.0.1 debugedit --build-id --build-id-seed=libcctbx0/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/libcctbx0/usr/lib/s390x-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 debugedit: debian/libcctbx0/usr/lib/s390x-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1: Unknown DWARF DW_FORM_0x1f21 8f307487ed769ac55d642c87e3eb8128de220ee4 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/8f objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/s390x-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/8f/307487ed769ac55d642c87e3eb8128de220ee4.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9a/c6b692e3f720f0b1d0ab0db85f1f297d565903.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/strip5N4n0M debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/strip5N4n0M cat '/tmp/MDcnXHegrm/strip5N4n0M' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/strip5N4n0M debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9a/c6b692e3f720f0b1d0ab0db85f1f297d565903.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopylhqg2u chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopylhqg2u cat '/tmp/MDcnXHegrm/objcopylhqg2u' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopylhqg2u debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 fa714fe9bd2e1313c36dffced27a9af61e3cc1f6 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa/714fe9bd2e1313c36dffced27a9af61e3cc1f6.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa/714fe9bd2e1313c36dffced27a9af61e3cc1f6.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/striphyFl0M debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/striphyFl0M cat '/tmp/MDcnXHegrm/striphyFl0M' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/striphyFl0M debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa/714fe9bd2e1313c36dffced27a9af61e3cc1f6.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyITmJZA chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyITmJZA cat '/tmp/MDcnXHegrm/objcopyITmJZA' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyITmJZA debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-312-s390x-linux-gnu.so chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/8f/307487ed769ac55d642c87e3eb8128de220ee4.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/WKaSFOrHRw/stripZpXAaA debian/libcctbx0/usr/lib/s390x-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 /tmp/WKaSFOrHRw/stripZpXAaA cat '/tmp/WKaSFOrHRw/stripZpXAaA' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1' chmod --reference /tmp/WKaSFOrHRw/stripZpXAaA debian/libcctbx0/usr/lib/s390x-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/8f/307487ed769ac55d642c87e3eb8128de220ee4.debug debian/libcctbx0/usr/lib/s390x-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 /tmp/WKaSFOrHRw/objcopyxSu1KB chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 /tmp/WKaSFOrHRw/objcopyxSu1KB cat '/tmp/WKaSFOrHRw/objcopyxSu1KB' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1' chmod --reference /tmp/WKaSFOrHRw/objcopyxSu1KB debian/libcctbx0/usr/lib/s390x-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 debugedit --build-id --build-id-seed=libcctbx0/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/libcctbx0/usr/lib/s390x-linux-gnu/libmmtbx_masks.so.0.0.1 debugedit: debian/libcctbx0/usr/lib/s390x-linux-gnu/libmmtbx_masks.so.0.0.1: Unknown DWARF DW_FORM_0x1f20 7fcdade7c8a78619acc1d3d3faf847024bf7ca23 018872810dc0948399ce1676c796c86b32e12af9 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/7f objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/s390x-linux-gnu/libmmtbx_masks.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/7f/cdade7c8a78619acc1d3d3faf847024bf7ca23.debug install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/01 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/01/8872810dc0948399ce1676c796c86b32e12af9.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/7f/cdade7c8a78619acc1d3d3faf847024bf7ca23.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/WKaSFOrHRw/strip4t89EK debian/libcctbx0/usr/lib/s390x-linux-gnu/libmmtbx_masks.so.0.0.1 chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libmmtbx_masks.so.0.0.1 /tmp/WKaSFOrHRw/strip4t89EK cat '/tmp/WKaSFOrHRw/strip4t89EK' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libmmtbx_masks.so.0.0.1' chmod --reference /tmp/WKaSFOrHRw/strip4t89EK debian/libcctbx0/usr/lib/s390x-linux-gnu/libmmtbx_masks.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/7f/cdade7c8a78619acc1d3d3faf847024bf7ca23.debug debian/libcctbx0/usr/lib/s390x-linux-gnu/libmmtbx_masks.so.0.0.1 /tmp/WKaSFOrHRw/objcopy3LROHD chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libmmtbx_masks.so.0.0.1 /tmp/WKaSFOrHRw/objcopy3LROHD cat '/tmp/WKaSFOrHRw/objcopy3LROHD' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libmmtbx_masks.so.0.0.1' chmod --reference /tmp/WKaSFOrHRw/objcopy3LROHD debian/libcctbx0/usr/lib/s390x-linux-gnu/libmmtbx_masks.so.0.0.1 debugedit --build-id --build-id-seed=libcctbx0/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/libcctbx0/usr/lib/s390x-linux-gnu/libspotfinder.so.0.0.1 debugedit: debian/libcctbx0/usr/lib/s390x-linux-gnu/libspotfinder.so.0.0.1: Unknown DWARF DW_FORM_0x1f21 545f480e7baae76ef717bba07d6c41d9ff6f78fa install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/54 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/s390x-linux-gnu/libspotfinder.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/54/5f480e7baae76ef717bba07d6c41d9ff6f78fa.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/54/5f480e7baae76ef717bba07d6c41d9ff6f78fa.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/WKaSFOrHRw/stripJbs8gk debian/libcctbx0/usr/lib/s390x-linux-gnu/libspotfinder.so.0.0.1 chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libspotfinder.so.0.0.1 /tmp/WKaSFOrHRw/stripJbs8gk cat '/tmp/WKaSFOrHRw/stripJbs8gk' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libspotfinder.so.0.0.1' chmod --reference /tmp/WKaSFOrHRw/stripJbs8gk debian/libcctbx0/usr/lib/s390x-linux-gnu/libspotfinder.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/54/5f480e7baae76ef717bba07d6c41d9ff6f78fa.debug debian/libcctbx0/usr/lib/s390x-linux-gnu/libspotfinder.so.0.0.1 /tmp/WKaSFOrHRw/objcopyuTRCKt chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libspotfinder.so.0.0.1 /tmp/WKaSFOrHRw/objcopyuTRCKt cat '/tmp/WKaSFOrHRw/objcopyuTRCKt' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libspotfinder.so.0.0.1' chmod --reference /tmp/WKaSFOrHRw/objcopyuTRCKt debian/libcctbx0/usr/lib/s390x-linux-gnu/libspotfinder.so.0.0.1 debugedit --build-id --build-id-seed=libcctbx0/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/libcctbx0/usr/lib/s390x-linux-gnu/libmmtbx_tls.so.0.0.1 debugedit: debian/libcctbx0/usr/lib/s390x-linux-gnu/libmmtbx_tls.so.0.0.1: Unknown DWARF DW_FORM_0x1f20 1f56b5634d33fc1f557d7356c85c8038cadea040 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/1f objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/s390x-linux-gnu/libmmtbx_tls.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/1f/56b5634d33fc1f557d7356c85c8038cadea040.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/1f/56b5634d33fc1f557d7356c85c8038cadea040.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/WKaSFOrHRw/stripwNFAxe debian/libcctbx0/usr/lib/s390x-linux-gnu/libmmtbx_tls.so.0.0.1 chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libmmtbx_tls.so.0.0.1 /tmp/WKaSFOrHRw/stripwNFAxe cat '/tmp/WKaSFOrHRw/stripwNFAxe' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libmmtbx_tls.so.0.0.1' chmod --reference /tmp/WKaSFOrHRw/stripwNFAxe debian/libcctbx0/usr/lib/s390x-linux-gnu/libmmtbx_tls.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/1f/56b5634d33fc1f557d7356c85c8038cadea040.debug debian/libcctbx0/usr/lib/s390x-linux-gnu/libmmtbx_tls.so.0.0.1 /tmp/WKaSFOrHRw/objcopybXmxtQ chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libmmtbx_tls.so.0.0.1 /tmp/WKaSFOrHRw/objcopybXmxtQ cat '/tmp/WKaSFOrHRw/objcopybXmxtQ' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libmmtbx_tls.so.0.0.1' chmod --reference /tmp/WKaSFOrHRw/objcopybXmxtQ debian/libcctbx0/usr/lib/s390x-linux-gnu/libmmtbx_tls.so.0.0.1 debugedit --build-id --build-id-seed=libcctbx0/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/libcctbx0/usr/lib/s390x-linux-gnu/libasymmetric_map.so.0.0.1 debugedit: debian/libcctbx0/usr/lib/s390x-linux-gnu/libasymmetric_map.so.0.0.1: Unknown DWARF DW_FORM_0x1f20 5bff63f48f9748582a519790202c5a8025c80f52 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/5b objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/s390x-linux-gnu/libasymmetric_map.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/5b/ff63f48f9748582a519790202c5a8025c80f52.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/01/8872810dc0948399ce1676c796c86b32e12af9.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripGlgQuQ debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripGlgQuQ cat '/tmp/MDcnXHegrm/stripGlgQuQ' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripGlgQuQ debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/01/8872810dc0948399ce1676c796c86b32e12af9.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyyPCx0n chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/5b/ff63f48f9748582a519790202c5a8025c80f52.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/WKaSFOrHRw/stripnfcEgl debian/libcctbx0/usr/lib/s390x-linux-gnu/libasymmetric_map.so.0.0.1 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyyPCx0n chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libasymmetric_map.so.0.0.1 /tmp/WKaSFOrHRw/stripnfcEgl cat '/tmp/MDcnXHegrm/objcopyyPCx0n' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-312-s390x-linux-gnu.so' cat '/tmp/WKaSFOrHRw/stripnfcEgl' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libasymmetric_map.so.0.0.1' chmod --reference /tmp/WKaSFOrHRw/stripnfcEgl debian/libcctbx0/usr/lib/s390x-linux-gnu/libasymmetric_map.so.0.0.1 chmod --reference /tmp/MDcnXHegrm/objcopyyPCx0n debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/5b/ff63f48f9748582a519790202c5a8025c80f52.debug debian/libcctbx0/usr/lib/s390x-linux-gnu/libasymmetric_map.so.0.0.1 /tmp/WKaSFOrHRw/objcopyoCvlIK debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libasymmetric_map.so.0.0.1 /tmp/WKaSFOrHRw/objcopyoCvlIK debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 cat '/tmp/WKaSFOrHRw/objcopyoCvlIK' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libasymmetric_map.so.0.0.1' 79a2a06a5307daa98645380b752f5558a6c4a6c8 chmod --reference /tmp/WKaSFOrHRw/objcopyoCvlIK debian/libcctbx0/usr/lib/s390x-linux-gnu/libasymmetric_map.so.0.0.1 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/79 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/79/a2a06a5307daa98645380b752f5558a6c4a6c8.debug debugedit --build-id --build-id-seed=libcctbx0/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/libcctbx0/usr/lib/s390x-linux-gnu/libann_adaptor.so.0.0.1 debugedit: debian/libcctbx0/usr/lib/s390x-linux-gnu/libann_adaptor.so.0.0.1: Unknown DWARF DW_FORM_0x1f20 601b042dd7798e5885b815f4be417f61b93bac2c install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/60 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/s390x-linux-gnu/libann_adaptor.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/60/1b042dd7798e5885b815f4be417f61b93bac2c.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/60/1b042dd7798e5885b815f4be417f61b93bac2c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/WKaSFOrHRw/stripdCwxzC debian/libcctbx0/usr/lib/s390x-linux-gnu/libann_adaptor.so.0.0.1 chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/79/a2a06a5307daa98645380b752f5558a6c4a6c8.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripdPwgAW debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libann_adaptor.so.0.0.1 /tmp/WKaSFOrHRw/stripdCwxzC cat '/tmp/WKaSFOrHRw/stripdCwxzC' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libann_adaptor.so.0.0.1' chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripdPwgAW chmod --reference /tmp/WKaSFOrHRw/stripdCwxzC debian/libcctbx0/usr/lib/s390x-linux-gnu/libann_adaptor.so.0.0.1 cat '/tmp/MDcnXHegrm/stripdPwgAW' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-312-s390x-linux-gnu.so' objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/60/1b042dd7798e5885b815f4be417f61b93bac2c.debug debian/libcctbx0/usr/lib/s390x-linux-gnu/libann_adaptor.so.0.0.1 /tmp/WKaSFOrHRw/objcopyrWjDdA chmod --reference /tmp/MDcnXHegrm/stripdPwgAW debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libann_adaptor.so.0.0.1 /tmp/WKaSFOrHRw/objcopyrWjDdA objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/79/a2a06a5307daa98645380b752f5558a6c4a6c8.debug debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyUf3J0D cat '/tmp/WKaSFOrHRw/objcopyrWjDdA' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libann_adaptor.so.0.0.1' chmod --reference /tmp/WKaSFOrHRw/objcopyrWjDdA debian/libcctbx0/usr/lib/s390x-linux-gnu/libann_adaptor.so.0.0.1 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyUf3J0D cat '/tmp/MDcnXHegrm/objcopyUf3J0D' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyUf3J0D debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=libcctbx0/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_xplor.so.0.0.1 debugedit: debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_xplor.so.0.0.1: Unknown DWARF DW_FORM_0x1f20 4e0f4e18403feaef7b04715c18aaf1c37949a517 debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 3ce4236e6aff53466eb38447a4f37fe03a256477 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/4e objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_xplor.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/4e/0f4e18403feaef7b04715c18aaf1c37949a517.debug install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3c objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3c/e4236e6aff53466eb38447a4f37fe03a256477.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3c/e4236e6aff53466eb38447a4f37fe03a256477.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripWjmngX debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripWjmngX cat '/tmp/MDcnXHegrm/stripWjmngX' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripWjmngX debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-312-s390x-linux-gnu.so chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/4e/0f4e18403feaef7b04715c18aaf1c37949a517.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/WKaSFOrHRw/stripn4u30f debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_xplor.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3c/e4236e6aff53466eb38447a4f37fe03a256477.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyQInn4c chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyQInn4c chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_xplor.so.0.0.1 /tmp/WKaSFOrHRw/stripn4u30f cat '/tmp/MDcnXHegrm/objcopyQInn4c' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-312-s390x-linux-gnu.so' cat '/tmp/WKaSFOrHRw/stripn4u30f' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_xplor.so.0.0.1' chmod --reference /tmp/WKaSFOrHRw/stripn4u30f debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_xplor.so.0.0.1 chmod --reference /tmp/MDcnXHegrm/objcopyQInn4c debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/4e/0f4e18403feaef7b04715c18aaf1c37949a517.debug debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_xplor.so.0.0.1 /tmp/WKaSFOrHRw/objcopyejgCPN chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_xplor.so.0.0.1 /tmp/WKaSFOrHRw/objcopyejgCPN cat '/tmp/WKaSFOrHRw/objcopyejgCPN' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_xplor.so.0.0.1' chmod --reference /tmp/WKaSFOrHRw/objcopyejgCPN debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_xplor.so.0.0.1 debugedit --build-id --build-id-seed=libcctbx0/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/libcctbx0/usr/lib/s390x-linux-gnu/libdxtbxspotfinder.so.0.0.1 debugedit: debian/libcctbx0/usr/lib/s390x-linux-gnu/libdxtbxspotfinder.so.0.0.1: Unknown DWARF DW_FORM_0x1f20 debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-312-s390x-linux-gnu.so 61b62d9fd00b935dfe590363dbd3792c256500c7 debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/61 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/s390x-linux-gnu/libdxtbxspotfinder.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/61/b62d9fd00b935dfe590363dbd3792c256500c7.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/61/b62d9fd00b935dfe590363dbd3792c256500c7.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/WKaSFOrHRw/stripzD4Amf debian/libcctbx0/usr/lib/s390x-linux-gnu/libdxtbxspotfinder.so.0.0.1 0f55e558bd69d1f0f9e317253d91cab860aca53f chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libdxtbxspotfinder.so.0.0.1 /tmp/WKaSFOrHRw/stripzD4Amf cat '/tmp/WKaSFOrHRw/stripzD4Amf' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libdxtbxspotfinder.so.0.0.1' chmod --reference /tmp/WKaSFOrHRw/stripzD4Amf debian/libcctbx0/usr/lib/s390x-linux-gnu/libdxtbxspotfinder.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/61/b62d9fd00b935dfe590363dbd3792c256500c7.debug debian/libcctbx0/usr/lib/s390x-linux-gnu/libdxtbxspotfinder.so.0.0.1 /tmp/WKaSFOrHRw/objcopy1Wlatm chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libdxtbxspotfinder.so.0.0.1 /tmp/WKaSFOrHRw/objcopy1Wlatm install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0f objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0f/55e558bd69d1f0f9e317253d91cab860aca53f.debug cat '/tmp/WKaSFOrHRw/objcopy1Wlatm' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libdxtbxspotfinder.so.0.0.1' chmod --reference /tmp/WKaSFOrHRw/objcopy1Wlatm debian/libcctbx0/usr/lib/s390x-linux-gnu/libdxtbxspotfinder.so.0.0.1 debugedit --build-id --build-id-seed=libcctbx0/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_boost_python.so.0.0.1 debugedit: debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_boost_python.so.0.0.1: Unknown DWARF DW_FORM_0x1f20 38e090133c37bcd30c79a927e7c1d8e61aee329e install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/38 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_boost_python.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/38/e090133c37bcd30c79a927e7c1d8e61aee329e.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/38/e090133c37bcd30c79a927e7c1d8e61aee329e.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/WKaSFOrHRw/stripDSyndz debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_boost_python.so.0.0.1 chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_boost_python.so.0.0.1 /tmp/WKaSFOrHRw/stripDSyndz cat '/tmp/WKaSFOrHRw/stripDSyndz' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_boost_python.so.0.0.1' chmod --reference /tmp/WKaSFOrHRw/stripDSyndz debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_boost_python.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/38/e090133c37bcd30c79a927e7c1d8e61aee329e.debug debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_boost_python.so.0.0.1 /tmp/WKaSFOrHRw/objcopyGyWvJG chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_boost_python.so.0.0.1 /tmp/WKaSFOrHRw/objcopyGyWvJG cat '/tmp/WKaSFOrHRw/objcopyGyWvJG' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_boost_python.so.0.0.1' chmod --reference /tmp/WKaSFOrHRw/objcopyGyWvJG debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_boost_python.so.0.0.1 debugedit --build-id --build-id-seed=libcctbx0/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_pdb.so.0.0.1 debugedit: debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_pdb.so.0.0.1: Unknown DWARF DW_FORM_0x1f21 91da95c45995404ea4f2549db7a0fc4b539b059b install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/91 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_pdb.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/91/da95c45995404ea4f2549db7a0fc4b539b059b.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0f/55e558bd69d1f0f9e317253d91cab860aca53f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripkM4CcQ debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripkM4CcQ cat '/tmp/MDcnXHegrm/stripkM4CcQ' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripkM4CcQ debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0f/55e558bd69d1f0f9e317253d91cab860aca53f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyQVdglf chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyQVdglf cat '/tmp/MDcnXHegrm/objcopyQVdglf' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyQVdglf debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 91212ca9e50d696fef07495bd8b79f79bc93b978 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91/212ca9e50d696fef07495bd8b79f79bc93b978.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91/212ca9e50d696fef07495bd8b79f79bc93b978.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripUFgzkp debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripUFgzkp cat '/tmp/MDcnXHegrm/stripUFgzkp' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripUFgzkp debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/91/212ca9e50d696fef07495bd8b79f79bc93b978.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyP0sTw5 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyP0sTw5 cat '/tmp/MDcnXHegrm/objcopyP0sTw5' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyP0sTw5 debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 dfbae16ae014cd229b4739449cb13bf15c8fd78f install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/df objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/df/bae16ae014cd229b4739449cb13bf15c8fd78f.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/df/bae16ae014cd229b4739449cb13bf15c8fd78f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripV0kMc4 debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripV0kMc4 cat '/tmp/MDcnXHegrm/stripV0kMc4' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripV0kMc4 debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/df/bae16ae014cd229b4739449cb13bf15c8fd78f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy4S818D chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/91/da95c45995404ea4f2549db7a0fc4b539b059b.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/WKaSFOrHRw/stripeoxVz3 debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_pdb.so.0.0.1 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy4S818D cat '/tmp/MDcnXHegrm/objcopy4S818D' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy4S818D debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_pdb.so.0.0.1 /tmp/WKaSFOrHRw/stripeoxVz3 cat '/tmp/WKaSFOrHRw/stripeoxVz3' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_pdb.so.0.0.1' chmod --reference /tmp/WKaSFOrHRw/stripeoxVz3 debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_pdb.so.0.0.1 debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/91/da95c45995404ea4f2549db7a0fc4b539b059b.debug debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_pdb.so.0.0.1 /tmp/WKaSFOrHRw/objcopy2vTHse debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_pdb.so.0.0.1 /tmp/WKaSFOrHRw/objcopy2vTHse cat '/tmp/WKaSFOrHRw/objcopy2vTHse' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_pdb.so.0.0.1' chmod --reference /tmp/WKaSFOrHRw/objcopy2vTHse debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_pdb.so.0.0.1 debugedit --build-id --build-id-seed=libcctbx0/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/libcctbx0/usr/lib/s390x-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 debugedit: debian/libcctbx0/usr/lib/s390x-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1: Unknown DWARF DW_FORM_0x1f21 b28f557b770b79caa7019cfd32f5a04e87cfbc30 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b2 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b2/8f557b770b79caa7019cfd32f5a04e87cfbc30.debug 08a6c5f0ddf0834a6ff427860a0a370a8c862a59 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/08 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/s390x-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/08/a6c5f0ddf0834a6ff427860a0a370a8c862a59.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b2/8f557b770b79caa7019cfd32f5a04e87cfbc30.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripT1B0hf debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripT1B0hf cat '/tmp/MDcnXHegrm/stripT1B0hf' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripT1B0hf debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b2/8f557b770b79caa7019cfd32f5a04e87cfbc30.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyW0ZURR chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyW0ZURR cat '/tmp/MDcnXHegrm/objcopyW0ZURR' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyW0ZURR debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 74517e38ad059fcd06b92eba599f9e3a5782e38d install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/74 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/74/517e38ad059fcd06b92eba599f9e3a5782e38d.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/08/a6c5f0ddf0834a6ff427860a0a370a8c862a59.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/WKaSFOrHRw/strip70VcZb debian/libcctbx0/usr/lib/s390x-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/74/517e38ad059fcd06b92eba599f9e3a5782e38d.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/strip_1KwA7 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/strip_1KwA7 cat '/tmp/MDcnXHegrm/strip_1KwA7' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-312-s390x-linux-gnu.so' chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 /tmp/WKaSFOrHRw/strip70VcZb chmod --reference /tmp/MDcnXHegrm/strip_1KwA7 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-312-s390x-linux-gnu.so cat '/tmp/WKaSFOrHRw/strip70VcZb' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1' objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/74/517e38ad059fcd06b92eba599f9e3a5782e38d.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy1gvbx8 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy1gvbx8 cat '/tmp/MDcnXHegrm/objcopy1gvbx8' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/WKaSFOrHRw/strip70VcZb debian/libcctbx0/usr/lib/s390x-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/08/a6c5f0ddf0834a6ff427860a0a370a8c862a59.debug debian/libcctbx0/usr/lib/s390x-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 /tmp/WKaSFOrHRw/objcopyCh0CIk chmod --reference /tmp/MDcnXHegrm/objcopy1gvbx8 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 5e9bd70501736439f5b2554a1bcc4bc139eab1b2 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5e objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5e/9bd70501736439f5b2554a1bcc4bc139eab1b2.debug chmod --reference debian/libcctbx0/usr/lib/s390x-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 /tmp/WKaSFOrHRw/objcopyCh0CIk cat '/tmp/WKaSFOrHRw/objcopyCh0CIk' > 'debian/libcctbx0/usr/lib/s390x-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1' chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5e/9bd70501736439f5b2554a1bcc4bc139eab1b2.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/strip_YJAgC debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-312-s390x-linux-gnu.so chmod --reference /tmp/WKaSFOrHRw/objcopyCh0CIk debian/libcctbx0/usr/lib/s390x-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/strip_YJAgC install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/libcctbx0/usr/lib/debug/.dwz/s390x-linux-gnu debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.dwz cat '/tmp/MDcnXHegrm/strip_YJAgC' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-312-s390x-linux-gnu.so' rm -fr debian/libcctbx0/usr/lib/debug/.dwz chmod --reference /tmp/MDcnXHegrm/strip_YJAgC debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-312-s390x-linux-gnu.so rmdir -p --ignore-fail-on-non-empty debian/libcctbx0/usr/lib/debug objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5e/9bd70501736439f5b2554a1bcc4bc139eab1b2.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopynTwWhy install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/share/doc ln -s libcctbx0 debian/.debhelper/libcctbx0/dbgsym-root/usr/share/doc/libcctbx0-dbgsym install -m0755 -d debian/.debhelper/libcctbx0 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopynTwWhy cat '/tmp/MDcnXHegrm/objcopynTwWhy' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopynTwWhy debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 5c00eddc2101cdd9ad1f3d39ba1cb10f607c8657 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5c objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5c/00eddc2101cdd9ad1f3d39ba1cb10f607c8657.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5c/00eddc2101cdd9ad1f3d39ba1cb10f607c8657.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/striptom025 debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/striptom025 cat '/tmp/MDcnXHegrm/striptom025' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/striptom025 debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5c/00eddc2101cdd9ad1f3d39ba1cb10f607c8657.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopynChNIj chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopynChNIj cat '/tmp/MDcnXHegrm/objcopynChNIj' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopynChNIj debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 5614c312dbdb9a936a1975e27c9e3487548fad72 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56/14c312dbdb9a936a1975e27c9e3487548fad72.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56/14c312dbdb9a936a1975e27c9e3487548fad72.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripb3AGfN debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripb3AGfN cat '/tmp/MDcnXHegrm/stripb3AGfN' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripb3AGfN debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56/14c312dbdb9a936a1975e27c9e3487548fad72.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopywS4R65 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopywS4R65 cat '/tmp/MDcnXHegrm/objcopywS4R65' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopywS4R65 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 5faa12a92b92108e3170f70933aef6f1ca9132fc install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5f objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5f/aa12a92b92108e3170f70933aef6f1ca9132fc.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5f/aa12a92b92108e3170f70933aef6f1ca9132fc.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripaXdEKQ debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripaXdEKQ cat '/tmp/MDcnXHegrm/stripaXdEKQ' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripaXdEKQ debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5f/aa12a92b92108e3170f70933aef6f1ca9132fc.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyeVJK4Y chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyeVJK4Y cat '/tmp/MDcnXHegrm/objcopyeVJK4Y' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyeVJK4Y debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 7c0c48cc7761b45cb0f1dc30733a8deafff3534f install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7c objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7c/0c48cc7761b45cb0f1dc30733a8deafff3534f.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7c/0c48cc7761b45cb0f1dc30733a8deafff3534f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/strippyqEEd debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/strippyqEEd cat '/tmp/MDcnXHegrm/strippyqEEd' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/strippyqEEd debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7c/0c48cc7761b45cb0f1dc30733a8deafff3534f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyz7_T9x chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyz7_T9x cat '/tmp/MDcnXHegrm/objcopyz7_T9x' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyz7_T9x debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 068e642e4bc43e6eae834df30adc86659cccbf5a install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/06 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/06/8e642e4bc43e6eae834df30adc86659cccbf5a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/06/8e642e4bc43e6eae834df30adc86659cccbf5a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/strip4TFtSt debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/strip4TFtSt cat '/tmp/MDcnXHegrm/strip4TFtSt' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/strip4TFtSt debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/06/8e642e4bc43e6eae834df30adc86659cccbf5a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy4o0oAX chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy4o0oAX cat '/tmp/MDcnXHegrm/objcopy4o0oAX' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy4o0oAX debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 205068207808f8217a1810d8166c470f30144072 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/20 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/20/5068207808f8217a1810d8166c470f30144072.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/20/5068207808f8217a1810d8166c470f30144072.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripBdJjBX debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripBdJjBX cat '/tmp/MDcnXHegrm/stripBdJjBX' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripBdJjBX debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/20/5068207808f8217a1810d8166c470f30144072.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyIbr5zj chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyIbr5zj cat '/tmp/MDcnXHegrm/objcopyIbr5zj' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyIbr5zj debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 f6405600e29074723489adba481fe5187d170978 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f6 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f6/405600e29074723489adba481fe5187d170978.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f6/405600e29074723489adba481fe5187d170978.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripHG54HI debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripHG54HI cat '/tmp/MDcnXHegrm/stripHG54HI' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripHG54HI debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f6/405600e29074723489adba481fe5187d170978.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopydbJmLP chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopydbJmLP cat '/tmp/MDcnXHegrm/objcopydbJmLP' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopydbJmLP debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 9a76b69e1f796542f86e2cbce2c35f25c7f0455e install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9a/76b69e1f796542f86e2cbce2c35f25c7f0455e.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9a/76b69e1f796542f86e2cbce2c35f25c7f0455e.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripd8J7v8 debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripd8J7v8 cat '/tmp/MDcnXHegrm/stripd8J7v8' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripd8J7v8 debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9a/76b69e1f796542f86e2cbce2c35f25c7f0455e.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyCL7ea5 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyCL7ea5 cat '/tmp/MDcnXHegrm/objcopyCL7ea5' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyCL7ea5 debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 840027f81fbce4c9a90e810205b384c48120bcb9 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/84 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/84/0027f81fbce4c9a90e810205b384c48120bcb9.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/84/0027f81fbce4c9a90e810205b384c48120bcb9.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripr1NMSb debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripr1NMSb cat '/tmp/MDcnXHegrm/stripr1NMSb' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripr1NMSb debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/84/0027f81fbce4c9a90e810205b384c48120bcb9.debug debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyLBzSwr chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyLBzSwr cat '/tmp/MDcnXHegrm/objcopyLBzSwr' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyLBzSwr debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 515f922300b63854b1204fe84e618dd459a176a3 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51/5f922300b63854b1204fe84e618dd459a176a3.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51/5f922300b63854b1204fe84e618dd459a176a3.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripudi_pp debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripudi_pp cat '/tmp/MDcnXHegrm/stripudi_pp' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripudi_pp debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51/5f922300b63854b1204fe84e618dd459a176a3.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy95oA8B chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy95oA8B cat '/tmp/MDcnXHegrm/objcopy95oA8B' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy95oA8B debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 d4ffcad5f4fc82ee3f5d39684d6c10f7f00fb890 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d4 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d4/ffcad5f4fc82ee3f5d39684d6c10f7f00fb890.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d4/ffcad5f4fc82ee3f5d39684d6c10f7f00fb890.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripeLNbRa debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripeLNbRa cat '/tmp/MDcnXHegrm/stripeLNbRa' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripeLNbRa debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d4/ffcad5f4fc82ee3f5d39684d6c10f7f00fb890.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyRR_DQY chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyRR_DQY cat '/tmp/MDcnXHegrm/objcopyRR_DQY' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyRR_DQY debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 76c8b1c0cca290dddbd698670f6daa1843530dc4 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/76 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/76/c8b1c0cca290dddbd698670f6daa1843530dc4.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/76/c8b1c0cca290dddbd698670f6daa1843530dc4.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/strip0LXYwD debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/strip0LXYwD cat '/tmp/MDcnXHegrm/strip0LXYwD' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/strip0LXYwD debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/76/c8b1c0cca290dddbd698670f6daa1843530dc4.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyZEAS4t chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyZEAS4t cat '/tmp/MDcnXHegrm/objcopyZEAS4t' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyZEAS4t debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 b51275b0b509d621d1000aaa739d77fde0a28d24 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b5 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b5/1275b0b509d621d1000aaa739d77fde0a28d24.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b5/1275b0b509d621d1000aaa739d77fde0a28d24.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripJBfzIn debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripJBfzIn cat '/tmp/MDcnXHegrm/stripJBfzIn' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripJBfzIn debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b5/1275b0b509d621d1000aaa739d77fde0a28d24.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy4poKJf chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy4poKJf cat '/tmp/MDcnXHegrm/objcopy4poKJf' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy4poKJf debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 39f1f2eafa3baf1b464d5f29b87070d62804aea7 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39/f1f2eafa3baf1b464d5f29b87070d62804aea7.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39/f1f2eafa3baf1b464d5f29b87070d62804aea7.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/strip0aPwru debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/strip0aPwru cat '/tmp/MDcnXHegrm/strip0aPwru' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/strip0aPwru debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39/f1f2eafa3baf1b464d5f29b87070d62804aea7.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyO8HUc1 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyO8HUc1 cat '/tmp/MDcnXHegrm/objcopyO8HUc1' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyO8HUc1 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 f49353ae470a38a0f04a3f77e78cce34fa1552ff install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f4 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f4/9353ae470a38a0f04a3f77e78cce34fa1552ff.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f4/9353ae470a38a0f04a3f77e78cce34fa1552ff.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripkkSJoo debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripkkSJoo cat '/tmp/MDcnXHegrm/stripkkSJoo' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripkkSJoo debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f4/9353ae470a38a0f04a3f77e78cce34fa1552ff.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy7c6D6z chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy7c6D6z cat '/tmp/MDcnXHegrm/objcopy7c6D6z' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy7c6D6z debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 fdceec76a57b9a3365a216e3347d49bbe690fab9 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fd objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fd/ceec76a57b9a3365a216e3347d49bbe690fab9.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fd/ceec76a57b9a3365a216e3347d49bbe690fab9.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripnFf3vR debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripnFf3vR cat '/tmp/MDcnXHegrm/stripnFf3vR' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripnFf3vR debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fd/ceec76a57b9a3365a216e3347d49bbe690fab9.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyihLwFe chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyihLwFe cat '/tmp/MDcnXHegrm/objcopyihLwFe' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyihLwFe debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 f0c43a30d881b08f0804b8594bb4ac995d570787 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f0 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f0/c43a30d881b08f0804b8594bb4ac995d570787.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f0/c43a30d881b08f0804b8594bb4ac995d570787.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripK9F9BK debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripK9F9BK cat '/tmp/MDcnXHegrm/stripK9F9BK' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripK9F9BK debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f0/c43a30d881b08f0804b8594bb4ac995d570787.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyMvTGmd chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyMvTGmd cat '/tmp/MDcnXHegrm/objcopyMvTGmd' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyMvTGmd debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 bc294b2828de7ff5a441671a272e0099f643e03a install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bc objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bc/294b2828de7ff5a441671a272e0099f643e03a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bc/294b2828de7ff5a441671a272e0099f643e03a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/strip5827vF debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/strip5827vF cat '/tmp/MDcnXHegrm/strip5827vF' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/strip5827vF debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bc/294b2828de7ff5a441671a272e0099f643e03a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyomuBjN chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyomuBjN cat '/tmp/MDcnXHegrm/objcopyomuBjN' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyomuBjN debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 233299a289ab5a91c1b0f6f1cc80e32d57db9547 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/23 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/23/3299a289ab5a91c1b0f6f1cc80e32d57db9547.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/23/3299a289ab5a91c1b0f6f1cc80e32d57db9547.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripTrCbHh debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripTrCbHh cat '/tmp/MDcnXHegrm/stripTrCbHh' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripTrCbHh debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/23/3299a289ab5a91c1b0f6f1cc80e32d57db9547.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopygmL5ND chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopygmL5ND cat '/tmp/MDcnXHegrm/objcopygmL5ND' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopygmL5ND debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 4796303c8600d58aca8ebed018ce5ad49ae498dc install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/47 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/47/96303c8600d58aca8ebed018ce5ad49ae498dc.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/47/96303c8600d58aca8ebed018ce5ad49ae498dc.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/strip3VsOlu debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/strip3VsOlu cat '/tmp/MDcnXHegrm/strip3VsOlu' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/strip3VsOlu debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/47/96303c8600d58aca8ebed018ce5ad49ae498dc.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyKvIBkH chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyKvIBkH cat '/tmp/MDcnXHegrm/objcopyKvIBkH' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyKvIBkH debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 e87124a3057fd18c5751d11c54d09af20b57c553 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e8 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e8/7124a3057fd18c5751d11c54d09af20b57c553.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e8/7124a3057fd18c5751d11c54d09af20b57c553.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/strip9Amn0G debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/strip9Amn0G cat '/tmp/MDcnXHegrm/strip9Amn0G' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/strip9Amn0G debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e8/7124a3057fd18c5751d11c54d09af20b57c553.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyxqc98j chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyxqc98j cat '/tmp/MDcnXHegrm/objcopyxqc98j' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyxqc98j debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 64e9304af4cf3c142a846b517210322be9355813 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/64 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/64/e9304af4cf3c142a846b517210322be9355813.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/64/e9304af4cf3c142a846b517210322be9355813.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripv4Qw8B debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripv4Qw8B cat '/tmp/MDcnXHegrm/stripv4Qw8B' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripv4Qw8B debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/64/e9304af4cf3c142a846b517210322be9355813.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyj0BBCv chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyj0BBCv cat '/tmp/MDcnXHegrm/objcopyj0BBCv' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyj0BBCv debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 468d24b08c1c9e7fe37f0083b8d3a03093a874bc install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/46 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/46/8d24b08c1c9e7fe37f0083b8d3a03093a874bc.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/46/8d24b08c1c9e7fe37f0083b8d3a03093a874bc.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripw7t383 debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripw7t383 cat '/tmp/MDcnXHegrm/stripw7t383' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripw7t383 debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/46/8d24b08c1c9e7fe37f0083b8d3a03093a874bc.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyfZTR2R chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyfZTR2R cat '/tmp/MDcnXHegrm/objcopyfZTR2R' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyfZTR2R debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 61c4dc1ec8248ac5871386177b41390d3357d05c install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/61 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/61/c4dc1ec8248ac5871386177b41390d3357d05c.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/61/c4dc1ec8248ac5871386177b41390d3357d05c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripD5FQLa debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripD5FQLa cat '/tmp/MDcnXHegrm/stripD5FQLa' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripD5FQLa debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/61/c4dc1ec8248ac5871386177b41390d3357d05c.debug debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy1Cp8Bs chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy1Cp8Bs cat '/tmp/MDcnXHegrm/objcopy1Cp8Bs' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy1Cp8Bs debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 99cf5604414aa176e70ae780afa0cab1718eb42e install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/99 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/99/cf5604414aa176e70ae780afa0cab1718eb42e.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/99/cf5604414aa176e70ae780afa0cab1718eb42e.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripROBALl debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripROBALl cat '/tmp/MDcnXHegrm/stripROBALl' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripROBALl debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/99/cf5604414aa176e70ae780afa0cab1718eb42e.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopygmf6Nh chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopygmf6Nh cat '/tmp/MDcnXHegrm/objcopygmf6Nh' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopygmf6Nh debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 61579081b7ac34fba26694d7e5d5d7b5808eefb2 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/61 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/61/579081b7ac34fba26694d7e5d5d7b5808eefb2.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/61/579081b7ac34fba26694d7e5d5d7b5808eefb2.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripCkW9wS debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripCkW9wS cat '/tmp/MDcnXHegrm/stripCkW9wS' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripCkW9wS debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/61/579081b7ac34fba26694d7e5d5d7b5808eefb2.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyY4liWR chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyY4liWR cat '/tmp/MDcnXHegrm/objcopyY4liWR' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyY4liWR debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 54b554fc2848397924618a150d33b91f5ab9940e install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/54 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/54/b554fc2848397924618a150d33b91f5ab9940e.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/54/b554fc2848397924618a150d33b91f5ab9940e.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripIv43pW debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripIv43pW cat '/tmp/MDcnXHegrm/stripIv43pW' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripIv43pW debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/54/b554fc2848397924618a150d33b91f5ab9940e.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyyC5gZd chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyyC5gZd cat '/tmp/MDcnXHegrm/objcopyyC5gZd' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyyC5gZd debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 b3398c7b1a24dd6a6c6af80e979f07b39299cd99 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b3 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b3/398c7b1a24dd6a6c6af80e979f07b39299cd99.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b3/398c7b1a24dd6a6c6af80e979f07b39299cd99.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripFS1Min debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripFS1Min cat '/tmp/MDcnXHegrm/stripFS1Min' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripFS1Min debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b3/398c7b1a24dd6a6c6af80e979f07b39299cd99.debug debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyKBiwpI chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyKBiwpI cat '/tmp/MDcnXHegrm/objcopyKBiwpI' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyKBiwpI debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 fa23d8bb07cfbf39f6fba2eb9e2d2cae7768adfc install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa/23d8bb07cfbf39f6fba2eb9e2d2cae7768adfc.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa/23d8bb07cfbf39f6fba2eb9e2d2cae7768adfc.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripVS9KNX debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripVS9KNX cat '/tmp/MDcnXHegrm/stripVS9KNX' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripVS9KNX debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa/23d8bb07cfbf39f6fba2eb9e2d2cae7768adfc.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyt91iGm chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyt91iGm cat '/tmp/MDcnXHegrm/objcopyt91iGm' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyt91iGm debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 be1d524a7f1e45e5c0bc09f760dce5edcc3dea2e install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/be objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/be/1d524a7f1e45e5c0bc09f760dce5edcc3dea2e.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/be/1d524a7f1e45e5c0bc09f760dce5edcc3dea2e.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripuIMfDR debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripuIMfDR cat '/tmp/MDcnXHegrm/stripuIMfDR' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripuIMfDR debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/be/1d524a7f1e45e5c0bc09f760dce5edcc3dea2e.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyvAsQ5M chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyvAsQ5M cat '/tmp/MDcnXHegrm/objcopyvAsQ5M' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyvAsQ5M debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 27711048ec329924a2d643cec207b44c7f19dc24 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/27 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/27/711048ec329924a2d643cec207b44c7f19dc24.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/27/711048ec329924a2d643cec207b44c7f19dc24.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripDxFzGF debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripDxFzGF cat '/tmp/MDcnXHegrm/stripDxFzGF' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripDxFzGF debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/27/711048ec329924a2d643cec207b44c7f19dc24.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyXftgbN chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyXftgbN cat '/tmp/MDcnXHegrm/objcopyXftgbN' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyXftgbN debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 67815a3638b69d1b7f2e9d7b51c1b936c4e15bbc install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/67 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/67/815a3638b69d1b7f2e9d7b51c1b936c4e15bbc.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/67/815a3638b69d1b7f2e9d7b51c1b936c4e15bbc.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/strip8nZJs7 debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/strip8nZJs7 cat '/tmp/MDcnXHegrm/strip8nZJs7' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/strip8nZJs7 debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/67/815a3638b69d1b7f2e9d7b51c1b936c4e15bbc.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyX2gjCK chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyX2gjCK cat '/tmp/MDcnXHegrm/objcopyX2gjCK' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyX2gjCK debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 ec058490aede004b97864e0adc7e479ab256c072 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ec objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ec/058490aede004b97864e0adc7e479ab256c072.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ec/058490aede004b97864e0adc7e479ab256c072.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripIUTB3v debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripIUTB3v cat '/tmp/MDcnXHegrm/stripIUTB3v' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripIUTB3v debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ec/058490aede004b97864e0adc7e479ab256c072.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopygtybDQ chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopygtybDQ cat '/tmp/MDcnXHegrm/objcopygtybDQ' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopygtybDQ debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 d19cdc788a955b53d355e021efb4d4bf5f1815c7 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d1 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d1/9cdc788a955b53d355e021efb4d4bf5f1815c7.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d1/9cdc788a955b53d355e021efb4d4bf5f1815c7.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripfhMf22 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripfhMf22 cat '/tmp/MDcnXHegrm/stripfhMf22' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripfhMf22 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d1/9cdc788a955b53d355e021efb4d4bf5f1815c7.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy8FPI9J chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy8FPI9J cat '/tmp/MDcnXHegrm/objcopy8FPI9J' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy8FPI9J debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 8675deafe78fe99a3bb9e0ec5e7a2b5a257eaab7 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/86 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/86/75deafe78fe99a3bb9e0ec5e7a2b5a257eaab7.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/86/75deafe78fe99a3bb9e0ec5e7a2b5a257eaab7.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripPIXY9V debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripPIXY9V cat '/tmp/MDcnXHegrm/stripPIXY9V' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripPIXY9V debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/86/75deafe78fe99a3bb9e0ec5e7a2b5a257eaab7.debug debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy1Okkn1 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy1Okkn1 cat '/tmp/MDcnXHegrm/objcopy1Okkn1' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy1Okkn1 debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 82a18261f3291f9162dabfa3fcdd26ffdffdeb36 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/82 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/82/a18261f3291f9162dabfa3fcdd26ffdffdeb36.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/82/a18261f3291f9162dabfa3fcdd26ffdffdeb36.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripkioKMi debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripkioKMi cat '/tmp/MDcnXHegrm/stripkioKMi' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripkioKMi debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/82/a18261f3291f9162dabfa3fcdd26ffdffdeb36.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyQC2c7e chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyQC2c7e cat '/tmp/MDcnXHegrm/objcopyQC2c7e' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyQC2c7e debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 62217532e4dea70f329a11740078b7278dfdfae7 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/62 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/62/217532e4dea70f329a11740078b7278dfdfae7.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/62/217532e4dea70f329a11740078b7278dfdfae7.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripj7uE7z debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripj7uE7z cat '/tmp/MDcnXHegrm/stripj7uE7z' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripj7uE7z debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/62/217532e4dea70f329a11740078b7278dfdfae7.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyWkPNT8 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyWkPNT8 cat '/tmp/MDcnXHegrm/objcopyWkPNT8' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyWkPNT8 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 9c0f5fd17bec5f316a1db028a2a27448b8582e94 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c/0f5fd17bec5f316a1db028a2a27448b8582e94.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c/0f5fd17bec5f316a1db028a2a27448b8582e94.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripki4vBS debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripki4vBS cat '/tmp/MDcnXHegrm/stripki4vBS' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripki4vBS debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c/0f5fd17bec5f316a1db028a2a27448b8582e94.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyfKblxK chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyfKblxK cat '/tmp/MDcnXHegrm/objcopyfKblxK' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyfKblxK debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 fa8162761591b566d185e94a288fce13b1259e30 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa/8162761591b566d185e94a288fce13b1259e30.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa/8162761591b566d185e94a288fce13b1259e30.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripEFxqlq debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripEFxqlq cat '/tmp/MDcnXHegrm/stripEFxqlq' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripEFxqlq debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa/8162761591b566d185e94a288fce13b1259e30.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyoM1ksQ chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyoM1ksQ cat '/tmp/MDcnXHegrm/objcopyoM1ksQ' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyoM1ksQ debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 6c8719d9fa12f39a41a59a91b520c10d814dcde6 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6c objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6c/8719d9fa12f39a41a59a91b520c10d814dcde6.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6c/8719d9fa12f39a41a59a91b520c10d814dcde6.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripAY7qGu debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripAY7qGu cat '/tmp/MDcnXHegrm/stripAY7qGu' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripAY7qGu debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6c/8719d9fa12f39a41a59a91b520c10d814dcde6.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyTys575 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyTys575 cat '/tmp/MDcnXHegrm/objcopyTys575' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyTys575 debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 78ead43188b23ab20585882b01a6407a35695c26 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/78 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/78/ead43188b23ab20585882b01a6407a35695c26.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/78/ead43188b23ab20585882b01a6407a35695c26.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripXLC7E7 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripXLC7E7 cat '/tmp/MDcnXHegrm/stripXLC7E7' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripXLC7E7 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/78/ead43188b23ab20585882b01a6407a35695c26.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyuLRPQ7 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyuLRPQ7 cat '/tmp/MDcnXHegrm/objcopyuLRPQ7' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyuLRPQ7 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 4108be605ce1696ad8c935e51e32e0b4b71543e8 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/41 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/41/08be605ce1696ad8c935e51e32e0b4b71543e8.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/41/08be605ce1696ad8c935e51e32e0b4b71543e8.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripuNu_di debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripuNu_di cat '/tmp/MDcnXHegrm/stripuNu_di' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripuNu_di debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/41/08be605ce1696ad8c935e51e32e0b4b71543e8.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopylCBuxO chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopylCBuxO cat '/tmp/MDcnXHegrm/objcopylCBuxO' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopylCBuxO debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 f288369340920ecaf34790ec7a33883705b749a6 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f2 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f2/88369340920ecaf34790ec7a33883705b749a6.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f2/88369340920ecaf34790ec7a33883705b749a6.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripCjD1mH debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripCjD1mH cat '/tmp/MDcnXHegrm/stripCjD1mH' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripCjD1mH debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f2/88369340920ecaf34790ec7a33883705b749a6.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyeST2aZ chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyeST2aZ cat '/tmp/MDcnXHegrm/objcopyeST2aZ' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyeST2aZ debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 691e86bc566caedb86c77485f8e24c77cac37b17 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/69 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/69/1e86bc566caedb86c77485f8e24c77cac37b17.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/69/1e86bc566caedb86c77485f8e24c77cac37b17.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripgxbNIE debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripgxbNIE cat '/tmp/MDcnXHegrm/stripgxbNIE' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripgxbNIE debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/69/1e86bc566caedb86c77485f8e24c77cac37b17.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy5PNB8R chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy5PNB8R cat '/tmp/MDcnXHegrm/objcopy5PNB8R' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy5PNB8R debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 eb31ebf70675ae6de3e29a267f115990aaadc7de install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/eb objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/eb/31ebf70675ae6de3e29a267f115990aaadc7de.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/eb/31ebf70675ae6de3e29a267f115990aaadc7de.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripFFGvQo debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripFFGvQo cat '/tmp/MDcnXHegrm/stripFFGvQo' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripFFGvQo debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/eb/31ebf70675ae6de3e29a267f115990aaadc7de.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopytNnfvn chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopytNnfvn cat '/tmp/MDcnXHegrm/objcopytNnfvn' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopytNnfvn debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 0a149c93660ee71dc7ef04f04710e5b4e6002959 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0a/149c93660ee71dc7ef04f04710e5b4e6002959.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0a/149c93660ee71dc7ef04f04710e5b4e6002959.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripcQ2k2V debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripcQ2k2V cat '/tmp/MDcnXHegrm/stripcQ2k2V' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripcQ2k2V debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0a/149c93660ee71dc7ef04f04710e5b4e6002959.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy7rizWJ chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy7rizWJ cat '/tmp/MDcnXHegrm/objcopy7rizWJ' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy7rizWJ debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 d27f3e399ea97e650893bacc94caed4eb48e50ae install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2/7f3e399ea97e650893bacc94caed4eb48e50ae.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2/7f3e399ea97e650893bacc94caed4eb48e50ae.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripiQQ5Va debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripiQQ5Va cat '/tmp/MDcnXHegrm/stripiQQ5Va' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripiQQ5Va debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2/7f3e399ea97e650893bacc94caed4eb48e50ae.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopySskTTQ chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopySskTTQ cat '/tmp/MDcnXHegrm/objcopySskTTQ' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopySskTTQ debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 b159db18e1ba969e104f216251a37b1a951b7dc6 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b1 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b1/59db18e1ba969e104f216251a37b1a951b7dc6.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b1/59db18e1ba969e104f216251a37b1a951b7dc6.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/strip0Hg99Q debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/strip0Hg99Q cat '/tmp/MDcnXHegrm/strip0Hg99Q' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/strip0Hg99Q debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b1/59db18e1ba969e104f216251a37b1a951b7dc6.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyU2DPya chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyU2DPya cat '/tmp/MDcnXHegrm/objcopyU2DPya' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyU2DPya debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 35371ffe95a389db4d6c94478c39208f96b8f506 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/35 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/35/371ffe95a389db4d6c94478c39208f96b8f506.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/35/371ffe95a389db4d6c94478c39208f96b8f506.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripM2sdIv debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripM2sdIv cat '/tmp/MDcnXHegrm/stripM2sdIv' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripM2sdIv debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/35/371ffe95a389db4d6c94478c39208f96b8f506.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopywOJXWb chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopywOJXWb cat '/tmp/MDcnXHegrm/objcopywOJXWb' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopywOJXWb debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 008377dffc48dadb3a58a7b401c83b0a88c8e6cc install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/00 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/00/8377dffc48dadb3a58a7b401c83b0a88c8e6cc.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/00/8377dffc48dadb3a58a7b401c83b0a88c8e6cc.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripViqoJk debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripViqoJk cat '/tmp/MDcnXHegrm/stripViqoJk' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripViqoJk debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/00/8377dffc48dadb3a58a7b401c83b0a88c8e6cc.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyR4EALH chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyR4EALH cat '/tmp/MDcnXHegrm/objcopyR4EALH' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyR4EALH debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 5d6e335b17bde18cfb56b00a6bf83d247a75e7ba install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5d objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5d/6e335b17bde18cfb56b00a6bf83d247a75e7ba.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5d/6e335b17bde18cfb56b00a6bf83d247a75e7ba.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripbNNqqg debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripbNNqqg cat '/tmp/MDcnXHegrm/stripbNNqqg' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripbNNqqg debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5d/6e335b17bde18cfb56b00a6bf83d247a75e7ba.debug debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopywqZkfJ chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopywqZkfJ cat '/tmp/MDcnXHegrm/objcopywqZkfJ' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopywqZkfJ debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 15f0948618f6c7c0358eeb4003bd2dc3f4f8c842 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/15 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/15/f0948618f6c7c0358eeb4003bd2dc3f4f8c842.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/15/f0948618f6c7c0358eeb4003bd2dc3f4f8c842.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripoHyK7J debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripoHyK7J cat '/tmp/MDcnXHegrm/stripoHyK7J' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripoHyK7J debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/15/f0948618f6c7c0358eeb4003bd2dc3f4f8c842.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyvoEiuY chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyvoEiuY cat '/tmp/MDcnXHegrm/objcopyvoEiuY' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyvoEiuY debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 4b2ad3188f4428c46311b6ec8e45d7326cfaf94a install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4b objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4b/2ad3188f4428c46311b6ec8e45d7326cfaf94a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4b/2ad3188f4428c46311b6ec8e45d7326cfaf94a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripfy_ANR debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripfy_ANR cat '/tmp/MDcnXHegrm/stripfy_ANR' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripfy_ANR debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4b/2ad3188f4428c46311b6ec8e45d7326cfaf94a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyB89UKr chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyB89UKr cat '/tmp/MDcnXHegrm/objcopyB89UKr' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyB89UKr debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 b8933b1dbf994b072ca07e42bcd82b3538d293fb install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b8 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b8/933b1dbf994b072ca07e42bcd82b3538d293fb.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b8/933b1dbf994b072ca07e42bcd82b3538d293fb.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripboyn0w debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripboyn0w cat '/tmp/MDcnXHegrm/stripboyn0w' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripboyn0w debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b8/933b1dbf994b072ca07e42bcd82b3538d293fb.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopybKVNNX chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopybKVNNX cat '/tmp/MDcnXHegrm/objcopybKVNNX' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopybKVNNX debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 f7757346ff8f75cdea640b824a206ec4977eb8b2 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f7 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f7/757346ff8f75cdea640b824a206ec4977eb8b2.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f7/757346ff8f75cdea640b824a206ec4977eb8b2.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripEVu4wo debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripEVu4wo cat '/tmp/MDcnXHegrm/stripEVu4wo' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripEVu4wo debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f7/757346ff8f75cdea640b824a206ec4977eb8b2.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyPpueOH chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyPpueOH cat '/tmp/MDcnXHegrm/objcopyPpueOH' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyPpueOH debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 a05fbc09aa9c7ec320b3631636c269b27d7a4d55 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a0 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a0/5fbc09aa9c7ec320b3631636c269b27d7a4d55.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a0/5fbc09aa9c7ec320b3631636c269b27d7a4d55.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripVmAnz8 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripVmAnz8 cat '/tmp/MDcnXHegrm/stripVmAnz8' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripVmAnz8 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a0/5fbc09aa9c7ec320b3631636c269b27d7a4d55.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyni0MN2 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyni0MN2 cat '/tmp/MDcnXHegrm/objcopyni0MN2' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyni0MN2 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 b6f09901478bcce06cd676cd3a83e01cb80dbb51 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b6 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b6/f09901478bcce06cd676cd3a83e01cb80dbb51.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b6/f09901478bcce06cd676cd3a83e01cb80dbb51.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripM2zznY debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripM2zznY cat '/tmp/MDcnXHegrm/stripM2zznY' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripM2zznY debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b6/f09901478bcce06cd676cd3a83e01cb80dbb51.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy4zDmlB chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy4zDmlB cat '/tmp/MDcnXHegrm/objcopy4zDmlB' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy4zDmlB debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 b2a66ead7802a5b67db7cab1c04a16c82cecd95c install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b2 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b2/a66ead7802a5b67db7cab1c04a16c82cecd95c.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b2/a66ead7802a5b67db7cab1c04a16c82cecd95c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/strip89suY_ debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/strip89suY_ cat '/tmp/MDcnXHegrm/strip89suY_' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/strip89suY_ debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b2/a66ead7802a5b67db7cab1c04a16c82cecd95c.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy5oam92 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy5oam92 cat '/tmp/MDcnXHegrm/objcopy5oam92' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy5oam92 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 57c0f241c42350051f0b73dc02ea0986130eddf6 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57/c0f241c42350051f0b73dc02ea0986130eddf6.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57/c0f241c42350051f0b73dc02ea0986130eddf6.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/strip9_SX7l debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/strip9_SX7l cat '/tmp/MDcnXHegrm/strip9_SX7l' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/strip9_SX7l debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57/c0f241c42350051f0b73dc02ea0986130eddf6.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyp8I9lN chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyp8I9lN cat '/tmp/MDcnXHegrm/objcopyp8I9lN' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyp8I9lN debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 8f76cc385ea5dca95d05a064bfb31ce24b040512 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f/76cc385ea5dca95d05a064bfb31ce24b040512.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f/76cc385ea5dca95d05a064bfb31ce24b040512.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripWXTAN3 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripWXTAN3 cat '/tmp/MDcnXHegrm/stripWXTAN3' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripWXTAN3 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f/76cc385ea5dca95d05a064bfb31ce24b040512.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyAffdkD chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyAffdkD cat '/tmp/MDcnXHegrm/objcopyAffdkD' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyAffdkD debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 fc7c4d60d34c0261b950b345a81a84b131e2bd7d install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fc objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fc/7c4d60d34c0261b950b345a81a84b131e2bd7d.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fc/7c4d60d34c0261b950b345a81a84b131e2bd7d.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripLVfCxT debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripLVfCxT cat '/tmp/MDcnXHegrm/stripLVfCxT' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripLVfCxT debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fc/7c4d60d34c0261b950b345a81a84b131e2bd7d.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy5REqLt chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy5REqLt cat '/tmp/MDcnXHegrm/objcopy5REqLt' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy5REqLt debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 ed1974c7c4702aa7e1e3d6f1b1b163cbb8acd74b install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ed objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ed/1974c7c4702aa7e1e3d6f1b1b163cbb8acd74b.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ed/1974c7c4702aa7e1e3d6f1b1b163cbb8acd74b.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripnKH4xL debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripnKH4xL cat '/tmp/MDcnXHegrm/stripnKH4xL' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripnKH4xL debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ed/1974c7c4702aa7e1e3d6f1b1b163cbb8acd74b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyLuJEcn chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyLuJEcn cat '/tmp/MDcnXHegrm/objcopyLuJEcn' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyLuJEcn debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 7ecb3c55bc8067af32e153e18ede530a02694198 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7e objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7e/cb3c55bc8067af32e153e18ede530a02694198.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7e/cb3c55bc8067af32e153e18ede530a02694198.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripazUOsV debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripazUOsV cat '/tmp/MDcnXHegrm/stripazUOsV' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripazUOsV debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7e/cb3c55bc8067af32e153e18ede530a02694198.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopymT8Stx chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopymT8Stx cat '/tmp/MDcnXHegrm/objcopymT8Stx' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopymT8Stx debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 390b3d0a54a5afdb0f3b8c090d8726c57d4ebf2d install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39/0b3d0a54a5afdb0f3b8c090d8726c57d4ebf2d.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39/0b3d0a54a5afdb0f3b8c090d8726c57d4ebf2d.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripnYNf2s debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripnYNf2s cat '/tmp/MDcnXHegrm/stripnYNf2s' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripnYNf2s debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39/0b3d0a54a5afdb0f3b8c090d8726c57d4ebf2d.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyubaITN chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyubaITN cat '/tmp/MDcnXHegrm/objcopyubaITN' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyubaITN debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 d1e8708a2cc5754e245b5d2efb8d6e4813d4114b install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d1 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d1/e8708a2cc5754e245b5d2efb8d6e4813d4114b.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d1/e8708a2cc5754e245b5d2efb8d6e4813d4114b.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/strippb1lvT debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/strippb1lvT cat '/tmp/MDcnXHegrm/strippb1lvT' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/strippb1lvT debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d1/e8708a2cc5754e245b5d2efb8d6e4813d4114b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy2QLyVl chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy2QLyVl cat '/tmp/MDcnXHegrm/objcopy2QLyVl' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy2QLyVl debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 ab99feb35eae193adbb4fa046e24393cba7df5de install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ab objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ab/99feb35eae193adbb4fa046e24393cba7df5de.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ab/99feb35eae193adbb4fa046e24393cba7df5de.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripip6EPC debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripip6EPC cat '/tmp/MDcnXHegrm/stripip6EPC' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripip6EPC debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ab/99feb35eae193adbb4fa046e24393cba7df5de.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyUo9mFm chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyUo9mFm cat '/tmp/MDcnXHegrm/objcopyUo9mFm' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyUo9mFm debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 7298e89ab2bf41e6e1cf0937a1354d698a3b2c44 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/72 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/72/98e89ab2bf41e6e1cf0937a1354d698a3b2c44.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/72/98e89ab2bf41e6e1cf0937a1354d698a3b2c44.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripPOo5h7 debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripPOo5h7 cat '/tmp/MDcnXHegrm/stripPOo5h7' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripPOo5h7 debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/72/98e89ab2bf41e6e1cf0937a1354d698a3b2c44.debug debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy44iNX6 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy44iNX6 cat '/tmp/MDcnXHegrm/objcopy44iNX6' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy44iNX6 debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 614213ea07841af454ecd6fe21c97d31515ee6cb install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/61 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/61/4213ea07841af454ecd6fe21c97d31515ee6cb.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/61/4213ea07841af454ecd6fe21c97d31515ee6cb.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripLBIz_5 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripLBIz_5 cat '/tmp/MDcnXHegrm/stripLBIz_5' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripLBIz_5 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/61/4213ea07841af454ecd6fe21c97d31515ee6cb.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopylJFfG3 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopylJFfG3 cat '/tmp/MDcnXHegrm/objcopylJFfG3' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopylJFfG3 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 899beb86346c5434c16067ff90f469832d76862a install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/89 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/89/9beb86346c5434c16067ff90f469832d76862a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/89/9beb86346c5434c16067ff90f469832d76862a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripB8Quo8 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripB8Quo8 cat '/tmp/MDcnXHegrm/stripB8Quo8' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripB8Quo8 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/89/9beb86346c5434c16067ff90f469832d76862a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyxl2DmY chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyxl2DmY cat '/tmp/MDcnXHegrm/objcopyxl2DmY' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyxl2DmY debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 90c06533d9a5a72622c142316dd652b10045f1a9 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/90 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/90/c06533d9a5a72622c142316dd652b10045f1a9.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/90/c06533d9a5a72622c142316dd652b10045f1a9.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripaYNL0m debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripaYNL0m cat '/tmp/MDcnXHegrm/stripaYNL0m' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripaYNL0m debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/90/c06533d9a5a72622c142316dd652b10045f1a9.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyc9Hha8 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyc9Hha8 cat '/tmp/MDcnXHegrm/objcopyc9Hha8' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyc9Hha8 debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 be0ef651f7cc093665be540c4e4d1f81f2a3ebaf install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/be objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/be/0ef651f7cc093665be540c4e4d1f81f2a3ebaf.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/be/0ef651f7cc093665be540c4e4d1f81f2a3ebaf.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/strip9hTg0Q debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/strip9hTg0Q cat '/tmp/MDcnXHegrm/strip9hTg0Q' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/strip9hTg0Q debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/be/0ef651f7cc093665be540c4e4d1f81f2a3ebaf.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy_1KO28 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy_1KO28 cat '/tmp/MDcnXHegrm/objcopy_1KO28' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy_1KO28 debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 859b7c9aa176b53730683c9e8c5dc0cef1196edd install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85/9b7c9aa176b53730683c9e8c5dc0cef1196edd.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85/9b7c9aa176b53730683c9e8c5dc0cef1196edd.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/strips9DEIm debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/strips9DEIm cat '/tmp/MDcnXHegrm/strips9DEIm' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/strips9DEIm debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85/9b7c9aa176b53730683c9e8c5dc0cef1196edd.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopywkiIzx chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopywkiIzx cat '/tmp/MDcnXHegrm/objcopywkiIzx' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopywkiIzx debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 2a01c3b688726c0c5036dec0ad6a2b842b12cecf install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2a/01c3b688726c0c5036dec0ad6a2b842b12cecf.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2a/01c3b688726c0c5036dec0ad6a2b842b12cecf.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripoZO1EN debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripoZO1EN cat '/tmp/MDcnXHegrm/stripoZO1EN' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripoZO1EN debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2a/01c3b688726c0c5036dec0ad6a2b842b12cecf.debug debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyhT619_ chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyhT619_ cat '/tmp/MDcnXHegrm/objcopyhT619_' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyhT619_ debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 0788bbbb5f92fbcf601084b7e82351ad8c7fe0d6 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/07 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/07/88bbbb5f92fbcf601084b7e82351ad8c7fe0d6.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/07/88bbbb5f92fbcf601084b7e82351ad8c7fe0d6.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripces4De debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripces4De cat '/tmp/MDcnXHegrm/stripces4De' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripces4De debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/07/88bbbb5f92fbcf601084b7e82351ad8c7fe0d6.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopybJ66Y4 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopybJ66Y4 cat '/tmp/MDcnXHegrm/objcopybJ66Y4' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopybJ66Y4 debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 a1e84863f95b18fe15c4bbf10d889cd782cbeb70 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a1 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a1/e84863f95b18fe15c4bbf10d889cd782cbeb70.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a1/e84863f95b18fe15c4bbf10d889cd782cbeb70.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripEQLWpG debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripEQLWpG cat '/tmp/MDcnXHegrm/stripEQLWpG' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripEQLWpG debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a1/e84863f95b18fe15c4bbf10d889cd782cbeb70.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyaTgfjY chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyaTgfjY cat '/tmp/MDcnXHegrm/objcopyaTgfjY' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyaTgfjY debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 567538b2b7218955bddafbb98acd1b9f47294733 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56/7538b2b7218955bddafbb98acd1b9f47294733.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56/7538b2b7218955bddafbb98acd1b9f47294733.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripvC7qaB debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripvC7qaB cat '/tmp/MDcnXHegrm/stripvC7qaB' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripvC7qaB debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56/7538b2b7218955bddafbb98acd1b9f47294733.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyQUW2MJ chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyQUW2MJ cat '/tmp/MDcnXHegrm/objcopyQUW2MJ' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyQUW2MJ debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 d4b6067cdb575ad75b8fe91adcaea94e02eb04cb install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d4 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d4/b6067cdb575ad75b8fe91adcaea94e02eb04cb.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d4/b6067cdb575ad75b8fe91adcaea94e02eb04cb.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/strip3FxsoH debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/strip3FxsoH cat '/tmp/MDcnXHegrm/strip3FxsoH' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/strip3FxsoH debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d4/b6067cdb575ad75b8fe91adcaea94e02eb04cb.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyjNWW7x chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyjNWW7x cat '/tmp/MDcnXHegrm/objcopyjNWW7x' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyjNWW7x debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 c76f12208c8dffb5b7ddfb2bdfebcbe58190fbc2 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7/6f12208c8dffb5b7ddfb2bdfebcbe58190fbc2.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7/6f12208c8dffb5b7ddfb2bdfebcbe58190fbc2.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripRKu9AN debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripRKu9AN cat '/tmp/MDcnXHegrm/stripRKu9AN' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripRKu9AN debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7/6f12208c8dffb5b7ddfb2bdfebcbe58190fbc2.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyhaI0a8 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyhaI0a8 cat '/tmp/MDcnXHegrm/objcopyhaI0a8' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyhaI0a8 debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 effe9f741711b8d06744d92685a28cf6b21feaf2 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ef objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ef/fe9f741711b8d06744d92685a28cf6b21feaf2.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ef/fe9f741711b8d06744d92685a28cf6b21feaf2.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripkU7Mnz debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripkU7Mnz cat '/tmp/MDcnXHegrm/stripkU7Mnz' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripkU7Mnz debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ef/fe9f741711b8d06744d92685a28cf6b21feaf2.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy6THmW2 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy6THmW2 cat '/tmp/MDcnXHegrm/objcopy6THmW2' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy6THmW2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 084c67a195f2034629c6e34679f82e2640a5dda2 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/08 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/08/4c67a195f2034629c6e34679f82e2640a5dda2.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/08/4c67a195f2034629c6e34679f82e2640a5dda2.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripx35WSo debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripx35WSo cat '/tmp/MDcnXHegrm/stripx35WSo' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripx35WSo debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/08/4c67a195f2034629c6e34679f82e2640a5dda2.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyPHppwg chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyPHppwg cat '/tmp/MDcnXHegrm/objcopyPHppwg' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyPHppwg debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 954e1d3ec32fc8106db2ceb495fa5d3d3f5e0e44 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/95 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/95/4e1d3ec32fc8106db2ceb495fa5d3d3f5e0e44.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/95/4e1d3ec32fc8106db2ceb495fa5d3d3f5e0e44.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripmEoT0Q debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripmEoT0Q cat '/tmp/MDcnXHegrm/stripmEoT0Q' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripmEoT0Q debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/95/4e1d3ec32fc8106db2ceb495fa5d3d3f5e0e44.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyqKs152 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyqKs152 cat '/tmp/MDcnXHegrm/objcopyqKs152' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyqKs152 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 28cb3b500d6564cc649550870089554700cc8f44 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/28 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/28/cb3b500d6564cc649550870089554700cc8f44.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/28/cb3b500d6564cc649550870089554700cc8f44.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripxFVHpF debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripxFVHpF cat '/tmp/MDcnXHegrm/stripxFVHpF' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripxFVHpF debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/28/cb3b500d6564cc649550870089554700cc8f44.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyDbJ34G chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyDbJ34G cat '/tmp/MDcnXHegrm/objcopyDbJ34G' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyDbJ34G debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 57a366266d165436b20d3da485dc96aaa37c218e install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57/a366266d165436b20d3da485dc96aaa37c218e.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57/a366266d165436b20d3da485dc96aaa37c218e.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/strip5VNQGT debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/strip5VNQGT cat '/tmp/MDcnXHegrm/strip5VNQGT' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/strip5VNQGT debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57/a366266d165436b20d3da485dc96aaa37c218e.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy5ZwgJ8 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy5ZwgJ8 cat '/tmp/MDcnXHegrm/objcopy5ZwgJ8' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy5ZwgJ8 debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 cb43fc3982c766a9258f84bf55c3194cc098f900 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cb objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cb/43fc3982c766a9258f84bf55c3194cc098f900.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cb/43fc3982c766a9258f84bf55c3194cc098f900.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripMfXCtL debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripMfXCtL cat '/tmp/MDcnXHegrm/stripMfXCtL' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripMfXCtL debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cb/43fc3982c766a9258f84bf55c3194cc098f900.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyLj9EVl chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyLj9EVl cat '/tmp/MDcnXHegrm/objcopyLj9EVl' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyLj9EVl debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 fff95570bc3f7e5bf913c6304b0f0744c91c384e install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ff objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ff/f95570bc3f7e5bf913c6304b0f0744c91c384e.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ff/f95570bc3f7e5bf913c6304b0f0744c91c384e.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripHOyN5G debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripHOyN5G cat '/tmp/MDcnXHegrm/stripHOyN5G' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripHOyN5G debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ff/f95570bc3f7e5bf913c6304b0f0744c91c384e.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyZ1GloL chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyZ1GloL cat '/tmp/MDcnXHegrm/objcopyZ1GloL' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyZ1GloL debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 0d3a34b041d70939afd990d4be3181fb8950d350 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0d objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0d/3a34b041d70939afd990d4be3181fb8950d350.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0d/3a34b041d70939afd990d4be3181fb8950d350.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripmAfPI4 debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripmAfPI4 cat '/tmp/MDcnXHegrm/stripmAfPI4' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripmAfPI4 debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0d/3a34b041d70939afd990d4be3181fb8950d350.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyP0noa5 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyP0noa5 cat '/tmp/MDcnXHegrm/objcopyP0noa5' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyP0noa5 debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 4c99def49fd79eb7e14b4df79041a8cca5cfcc8e install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4c objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4c/99def49fd79eb7e14b4df79041a8cca5cfcc8e.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4c/99def49fd79eb7e14b4df79041a8cca5cfcc8e.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripVrP9AJ debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripVrP9AJ cat '/tmp/MDcnXHegrm/stripVrP9AJ' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripVrP9AJ debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4c/99def49fd79eb7e14b4df79041a8cca5cfcc8e.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopybj1Z5z chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopybj1Z5z cat '/tmp/MDcnXHegrm/objcopybj1Z5z' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopybj1Z5z debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 bb4ee375f991d9deac27eebf2951f135dbdf78eb install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bb objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bb/4ee375f991d9deac27eebf2951f135dbdf78eb.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bb/4ee375f991d9deac27eebf2951f135dbdf78eb.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripaCWEys debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripaCWEys cat '/tmp/MDcnXHegrm/stripaCWEys' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripaCWEys debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bb/4ee375f991d9deac27eebf2951f135dbdf78eb.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopybtz3On chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopybtz3On cat '/tmp/MDcnXHegrm/objcopybtz3On' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopybtz3On debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 3cf20967b76e846f5862979866c3404630f25ea3 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3c objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3c/f20967b76e846f5862979866c3404630f25ea3.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3c/f20967b76e846f5862979866c3404630f25ea3.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/strip2gUpnz debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/strip2gUpnz cat '/tmp/MDcnXHegrm/strip2gUpnz' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/strip2gUpnz debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3c/f20967b76e846f5862979866c3404630f25ea3.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyhBH0Fk chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyhBH0Fk cat '/tmp/MDcnXHegrm/objcopyhBH0Fk' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyhBH0Fk debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 a6a29ba145b2c0a2a1ef1c6534e19e86895bbf53 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a6 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a6/a29ba145b2c0a2a1ef1c6534e19e86895bbf53.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a6/a29ba145b2c0a2a1ef1c6534e19e86895bbf53.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/striptpH9Fy debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/striptpH9Fy cat '/tmp/MDcnXHegrm/striptpH9Fy' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/striptpH9Fy debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a6/a29ba145b2c0a2a1ef1c6534e19e86895bbf53.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy3THrF0 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy3THrF0 cat '/tmp/MDcnXHegrm/objcopy3THrF0' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy3THrF0 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 5b07d4474c9f051ab6e49b5f3a63e5ec4805c5f8 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5b objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5b/07d4474c9f051ab6e49b5f3a63e5ec4805c5f8.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5b/07d4474c9f051ab6e49b5f3a63e5ec4805c5f8.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripLjHXhN debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripLjHXhN cat '/tmp/MDcnXHegrm/stripLjHXhN' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripLjHXhN debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5b/07d4474c9f051ab6e49b5f3a63e5ec4805c5f8.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy_3W_AH chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy_3W_AH cat '/tmp/MDcnXHegrm/objcopy_3W_AH' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy_3W_AH debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 eed1c727db1a63473cc3d78333937a39a777c15c install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ee objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ee/d1c727db1a63473cc3d78333937a39a777c15c.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ee/d1c727db1a63473cc3d78333937a39a777c15c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripFI8FQ6 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripFI8FQ6 cat '/tmp/MDcnXHegrm/stripFI8FQ6' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripFI8FQ6 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ee/d1c727db1a63473cc3d78333937a39a777c15c.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopytAN5uT chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopytAN5uT cat '/tmp/MDcnXHegrm/objcopytAN5uT' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopytAN5uT debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 b7c4819a7bc2db8f40a762f77614de95735162c6 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b7 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b7/c4819a7bc2db8f40a762f77614de95735162c6.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b7/c4819a7bc2db8f40a762f77614de95735162c6.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/strip1KQH2m debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/strip1KQH2m cat '/tmp/MDcnXHegrm/strip1KQH2m' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/strip1KQH2m debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b7/c4819a7bc2db8f40a762f77614de95735162c6.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy9g_Dxd chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy9g_Dxd cat '/tmp/MDcnXHegrm/objcopy9g_Dxd' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy9g_Dxd debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 5c1f3407640867bc77a2326f93d0469c40316931 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5c objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5c/1f3407640867bc77a2326f93d0469c40316931.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5c/1f3407640867bc77a2326f93d0469c40316931.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripSvlbyk debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripSvlbyk cat '/tmp/MDcnXHegrm/stripSvlbyk' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripSvlbyk debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5c/1f3407640867bc77a2326f93d0469c40316931.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyWIYGre chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyWIYGre cat '/tmp/MDcnXHegrm/objcopyWIYGre' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyWIYGre debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 f3ac18a11fe7eafc6a438272b5c7510c3e0a1a45 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f3 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f3/ac18a11fe7eafc6a438272b5c7510c3e0a1a45.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f3/ac18a11fe7eafc6a438272b5c7510c3e0a1a45.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripNGdKg3 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripNGdKg3 cat '/tmp/MDcnXHegrm/stripNGdKg3' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripNGdKg3 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f3/ac18a11fe7eafc6a438272b5c7510c3e0a1a45.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyt_415x chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyt_415x cat '/tmp/MDcnXHegrm/objcopyt_415x' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyt_415x debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 acfce12df9f331b458d4b793435be2e780a9c47d install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ac objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ac/fce12df9f331b458d4b793435be2e780a9c47d.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ac/fce12df9f331b458d4b793435be2e780a9c47d.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripS50f0d debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripS50f0d cat '/tmp/MDcnXHegrm/stripS50f0d' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripS50f0d debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ac/fce12df9f331b458d4b793435be2e780a9c47d.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyYZq2zN chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyYZq2zN cat '/tmp/MDcnXHegrm/objcopyYZq2zN' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyYZq2zN debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 20d6a828a4aaa28182f4927ce8cf6430c2acc4bb install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/20 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/20/d6a828a4aaa28182f4927ce8cf6430c2acc4bb.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/20/d6a828a4aaa28182f4927ce8cf6430c2acc4bb.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripU6zLmJ debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripU6zLmJ cat '/tmp/MDcnXHegrm/stripU6zLmJ' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripU6zLmJ debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/20/d6a828a4aaa28182f4927ce8cf6430c2acc4bb.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyqjLlkk chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyqjLlkk cat '/tmp/MDcnXHegrm/objcopyqjLlkk' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyqjLlkk debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 8d820bc56381d3b12fe5c6f15c2dd778078dc45f install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8d objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8d/820bc56381d3b12fe5c6f15c2dd778078dc45f.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8d/820bc56381d3b12fe5c6f15c2dd778078dc45f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripB8KzeQ debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripB8KzeQ cat '/tmp/MDcnXHegrm/stripB8KzeQ' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripB8KzeQ debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8d/820bc56381d3b12fe5c6f15c2dd778078dc45f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyLBpQkN chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyLBpQkN cat '/tmp/MDcnXHegrm/objcopyLBpQkN' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyLBpQkN debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 0a3934a385da1363bbb654c1e847f4554f79dad7 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0a/3934a385da1363bbb654c1e847f4554f79dad7.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0a/3934a385da1363bbb654c1e847f4554f79dad7.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripm_WKkC debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripm_WKkC cat '/tmp/MDcnXHegrm/stripm_WKkC' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripm_WKkC debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0a/3934a385da1363bbb654c1e847f4554f79dad7.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyha1nWR chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyha1nWR cat '/tmp/MDcnXHegrm/objcopyha1nWR' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyha1nWR debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 d07349f77fe3e98a17bea77c20800b3dfe71eb6b install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d0 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d0/7349f77fe3e98a17bea77c20800b3dfe71eb6b.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d0/7349f77fe3e98a17bea77c20800b3dfe71eb6b.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/striplakfLQ debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/striplakfLQ cat '/tmp/MDcnXHegrm/striplakfLQ' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/striplakfLQ debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d0/7349f77fe3e98a17bea77c20800b3dfe71eb6b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopypaUP4S chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopypaUP4S cat '/tmp/MDcnXHegrm/objcopypaUP4S' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopypaUP4S debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 f5e4236f321fc4516c58ab035c607c274c506eb4 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f5 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f5/e4236f321fc4516c58ab035c607c274c506eb4.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f5/e4236f321fc4516c58ab035c607c274c506eb4.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripNznopw debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripNznopw cat '/tmp/MDcnXHegrm/stripNznopw' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripNznopw debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f5/e4236f321fc4516c58ab035c607c274c506eb4.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopysD2Qd4 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopysD2Qd4 cat '/tmp/MDcnXHegrm/objcopysD2Qd4' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopysD2Qd4 debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 bc7fee383c190acb75b51380953e0eeeb50c4a4c install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bc objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bc/7fee383c190acb75b51380953e0eeeb50c4a4c.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bc/7fee383c190acb75b51380953e0eeeb50c4a4c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripLI9ZlS debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripLI9ZlS cat '/tmp/MDcnXHegrm/stripLI9ZlS' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripLI9ZlS debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bc/7fee383c190acb75b51380953e0eeeb50c4a4c.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyU0JtiY chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyU0JtiY cat '/tmp/MDcnXHegrm/objcopyU0JtiY' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyU0JtiY debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 eeb9b9a672741f32cd05451bda6471948ceaabd1 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ee objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ee/b9b9a672741f32cd05451bda6471948ceaabd1.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ee/b9b9a672741f32cd05451bda6471948ceaabd1.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripRgfo9E debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripRgfo9E cat '/tmp/MDcnXHegrm/stripRgfo9E' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripRgfo9E debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ee/b9b9a672741f32cd05451bda6471948ceaabd1.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy1IiNqs chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy1IiNqs cat '/tmp/MDcnXHegrm/objcopy1IiNqs' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy1IiNqs debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 46dc9233f1fe87c291f2054513c906ca33208747 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/46 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/46/dc9233f1fe87c291f2054513c906ca33208747.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/46/dc9233f1fe87c291f2054513c906ca33208747.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/strips_9rXy debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/strips_9rXy cat '/tmp/MDcnXHegrm/strips_9rXy' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/strips_9rXy debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/46/dc9233f1fe87c291f2054513c906ca33208747.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyM5FKJB chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyM5FKJB cat '/tmp/MDcnXHegrm/objcopyM5FKJB' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyM5FKJB debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 e5075f90d8f9906b7e16e9509a90652059ed425d install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e5 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e5/075f90d8f9906b7e16e9509a90652059ed425d.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e5/075f90d8f9906b7e16e9509a90652059ed425d.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripVgeVH1 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripVgeVH1 cat '/tmp/MDcnXHegrm/stripVgeVH1' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripVgeVH1 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e5/075f90d8f9906b7e16e9509a90652059ed425d.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyc7KSr4 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyc7KSr4 cat '/tmp/MDcnXHegrm/objcopyc7KSr4' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyc7KSr4 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 dbfed91faf7afc62426cc96a51751ce4b55ad02e install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/db objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/db/fed91faf7afc62426cc96a51751ce4b55ad02e.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/db/fed91faf7afc62426cc96a51751ce4b55ad02e.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripd92lkH debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripd92lkH cat '/tmp/MDcnXHegrm/stripd92lkH' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripd92lkH debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/db/fed91faf7afc62426cc96a51751ce4b55ad02e.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopymhQx4P chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopymhQx4P cat '/tmp/MDcnXHegrm/objcopymhQx4P' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopymhQx4P debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 2c8a8cdc82489f6d0dee79e4b7a41a4b3860e94e install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2c objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2c/8a8cdc82489f6d0dee79e4b7a41a4b3860e94e.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2c/8a8cdc82489f6d0dee79e4b7a41a4b3860e94e.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripkvOi7u debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripkvOi7u cat '/tmp/MDcnXHegrm/stripkvOi7u' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripkvOi7u debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2c/8a8cdc82489f6d0dee79e4b7a41a4b3860e94e.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyc9LOu4 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyc9LOu4 cat '/tmp/MDcnXHegrm/objcopyc9LOu4' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyc9LOu4 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 76a19ac6bce7db9f5f5f5a81d33651034e58a3b1 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/76 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/76/a19ac6bce7db9f5f5f5a81d33651034e58a3b1.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/76/a19ac6bce7db9f5f5f5a81d33651034e58a3b1.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripf2RSCr debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripf2RSCr cat '/tmp/MDcnXHegrm/stripf2RSCr' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripf2RSCr debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/76/a19ac6bce7db9f5f5f5a81d33651034e58a3b1.debug debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyhnP37_ chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyhnP37_ cat '/tmp/MDcnXHegrm/objcopyhnP37_' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyhnP37_ debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 4ed5667ae9184df204f3523185d883b0e2427367 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4e objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4e/d5667ae9184df204f3523185d883b0e2427367.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4e/d5667ae9184df204f3523185d883b0e2427367.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripdYwEoK debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripdYwEoK cat '/tmp/MDcnXHegrm/stripdYwEoK' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripdYwEoK debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4e/d5667ae9184df204f3523185d883b0e2427367.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyf3SYfl chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyf3SYfl cat '/tmp/MDcnXHegrm/objcopyf3SYfl' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyf3SYfl debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 d54af92cce931f92685b581e63e7806ef7e74f29 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d5 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d5/4af92cce931f92685b581e63e7806ef7e74f29.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d5/4af92cce931f92685b581e63e7806ef7e74f29.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripOBRsP4 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripOBRsP4 cat '/tmp/MDcnXHegrm/stripOBRsP4' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripOBRsP4 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d5/4af92cce931f92685b581e63e7806ef7e74f29.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyLYh93a chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyLYh93a cat '/tmp/MDcnXHegrm/objcopyLYh93a' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyLYh93a debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 09a1ab6f488d9c1c716ad76d14a3429c01e9b239 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/09 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/09/a1ab6f488d9c1c716ad76d14a3429c01e9b239.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/09/a1ab6f488d9c1c716ad76d14a3429c01e9b239.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripwa228z debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripwa228z cat '/tmp/MDcnXHegrm/stripwa228z' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripwa228z debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/09/a1ab6f488d9c1c716ad76d14a3429c01e9b239.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyx_5d6B chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyx_5d6B cat '/tmp/MDcnXHegrm/objcopyx_5d6B' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyx_5d6B debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 546a051e2b01d9a5da38ad2e730f23c214ebac36 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/54 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/54/6a051e2b01d9a5da38ad2e730f23c214ebac36.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/54/6a051e2b01d9a5da38ad2e730f23c214ebac36.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/striptIyLLy debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/striptIyLLy cat '/tmp/MDcnXHegrm/striptIyLLy' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/striptIyLLy debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/54/6a051e2b01d9a5da38ad2e730f23c214ebac36.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopySkvX_O chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopySkvX_O cat '/tmp/MDcnXHegrm/objcopySkvX_O' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopySkvX_O debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 362f00e089460f88a9e7dc59b7be886d01a01d15 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36/2f00e089460f88a9e7dc59b7be886d01a01d15.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36/2f00e089460f88a9e7dc59b7be886d01a01d15.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripwVruyO debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripwVruyO cat '/tmp/MDcnXHegrm/stripwVruyO' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripwVruyO debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36/2f00e089460f88a9e7dc59b7be886d01a01d15.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy0qY_JF chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy0qY_JF cat '/tmp/MDcnXHegrm/objcopy0qY_JF' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy0qY_JF debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 75a6409e6c62e74a5cf2a6484fab4fb96a5bb7ab install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/75 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/75/a6409e6c62e74a5cf2a6484fab4fb96a5bb7ab.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/75/a6409e6c62e74a5cf2a6484fab4fb96a5bb7ab.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripmxyOec debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripmxyOec cat '/tmp/MDcnXHegrm/stripmxyOec' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripmxyOec debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/75/a6409e6c62e74a5cf2a6484fab4fb96a5bb7ab.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyyURmrF chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyyURmrF cat '/tmp/MDcnXHegrm/objcopyyURmrF' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyyURmrF debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 c3024eb844267dcd52a8b34cb65a3e2286d2b315 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c3 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c3/024eb844267dcd52a8b34cb65a3e2286d2b315.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c3/024eb844267dcd52a8b34cb65a3e2286d2b315.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripniBeGe debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripniBeGe cat '/tmp/MDcnXHegrm/stripniBeGe' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripniBeGe debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c3/024eb844267dcd52a8b34cb65a3e2286d2b315.debug debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy0dGJ2u chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy0dGJ2u cat '/tmp/MDcnXHegrm/objcopy0dGJ2u' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy0dGJ2u debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 85c2b8a11527d81c260f9b010f93780834d77890 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85/c2b8a11527d81c260f9b010f93780834d77890.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85/c2b8a11527d81c260f9b010f93780834d77890.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripQvzG02 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripQvzG02 cat '/tmp/MDcnXHegrm/stripQvzG02' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripQvzG02 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85/c2b8a11527d81c260f9b010f93780834d77890.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyeBFIfh chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyeBFIfh cat '/tmp/MDcnXHegrm/objcopyeBFIfh' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyeBFIfh debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 c2ddefdf8946c2a70db0ab4f21757e1db9194fba install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c2 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c2/ddefdf8946c2a70db0ab4f21757e1db9194fba.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c2/ddefdf8946c2a70db0ab4f21757e1db9194fba.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripDYBYM_ debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripDYBYM_ cat '/tmp/MDcnXHegrm/stripDYBYM_' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripDYBYM_ debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c2/ddefdf8946c2a70db0ab4f21757e1db9194fba.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyYbSg_c chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyYbSg_c cat '/tmp/MDcnXHegrm/objcopyYbSg_c' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyYbSg_c debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 6cbbd4758caa4330edbf75ceaa680c8469318693 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6c objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6c/bbd4758caa4330edbf75ceaa680c8469318693.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6c/bbd4758caa4330edbf75ceaa680c8469318693.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripwRIuN0 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripwRIuN0 cat '/tmp/MDcnXHegrm/stripwRIuN0' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripwRIuN0 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6c/bbd4758caa4330edbf75ceaa680c8469318693.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyi5Y9An chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyi5Y9An cat '/tmp/MDcnXHegrm/objcopyi5Y9An' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyi5Y9An debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 95b3425d4f2fad33879a1a69a0db74d080ea27eb install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/95 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/95/b3425d4f2fad33879a1a69a0db74d080ea27eb.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/95/b3425d4f2fad33879a1a69a0db74d080ea27eb.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripDEvVkJ debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripDEvVkJ cat '/tmp/MDcnXHegrm/stripDEvVkJ' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripDEvVkJ debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/95/b3425d4f2fad33879a1a69a0db74d080ea27eb.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyPf1C6u chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyPf1C6u cat '/tmp/MDcnXHegrm/objcopyPf1C6u' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyPf1C6u debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 1d52c01e0ec89568b8cf8be305c0c46ac1eaa261 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1d objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1d/52c01e0ec89568b8cf8be305c0c46ac1eaa261.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1d/52c01e0ec89568b8cf8be305c0c46ac1eaa261.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripNKXLDb debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripNKXLDb cat '/tmp/MDcnXHegrm/stripNKXLDb' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripNKXLDb debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1d/52c01e0ec89568b8cf8be305c0c46ac1eaa261.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyy7eKhe chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyy7eKhe cat '/tmp/MDcnXHegrm/objcopyy7eKhe' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyy7eKhe debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 2a042a4a5414fdb3b79106bc534ff34b16066b71 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2a/042a4a5414fdb3b79106bc534ff34b16066b71.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2a/042a4a5414fdb3b79106bc534ff34b16066b71.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripBnt8EV debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripBnt8EV cat '/tmp/MDcnXHegrm/stripBnt8EV' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripBnt8EV debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2a/042a4a5414fdb3b79106bc534ff34b16066b71.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy5Ga93V chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy5Ga93V cat '/tmp/MDcnXHegrm/objcopy5Ga93V' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy5Ga93V debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 faf190f919767571eac42ae6c30c52f4d3d2730a install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa/f190f919767571eac42ae6c30c52f4d3d2730a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa/f190f919767571eac42ae6c30c52f4d3d2730a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripRJc2xF debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripRJc2xF cat '/tmp/MDcnXHegrm/stripRJc2xF' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripRJc2xF debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa/f190f919767571eac42ae6c30c52f4d3d2730a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy9boB2Q chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy9boB2Q cat '/tmp/MDcnXHegrm/objcopy9boB2Q' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy9boB2Q debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 479246a3032ababc5ab4a72b3023ed5acff9a264 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/47 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/47/9246a3032ababc5ab4a72b3023ed5acff9a264.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/47/9246a3032ababc5ab4a72b3023ed5acff9a264.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripv8yxCK debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripv8yxCK cat '/tmp/MDcnXHegrm/stripv8yxCK' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripv8yxCK debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/47/9246a3032ababc5ab4a72b3023ed5acff9a264.debug debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyeQQ23P chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyeQQ23P cat '/tmp/MDcnXHegrm/objcopyeQQ23P' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyeQQ23P debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 b643a75d49ba6fa8f8020e29dc79cc1f6531d7e6 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b6 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b6/43a75d49ba6fa8f8020e29dc79cc1f6531d7e6.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b6/43a75d49ba6fa8f8020e29dc79cc1f6531d7e6.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/strip07ZURe debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/strip07ZURe cat '/tmp/MDcnXHegrm/strip07ZURe' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/strip07ZURe debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b6/43a75d49ba6fa8f8020e29dc79cc1f6531d7e6.debug debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyLi9sKC chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyLi9sKC cat '/tmp/MDcnXHegrm/objcopyLi9sKC' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyLi9sKC debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 db9b836e24fc10eba22240ce0c8cee8e9fbbe84e install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/db objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/db/9b836e24fc10eba22240ce0c8cee8e9fbbe84e.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/db/9b836e24fc10eba22240ce0c8cee8e9fbbe84e.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripZs8umV debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripZs8umV cat '/tmp/MDcnXHegrm/stripZs8umV' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripZs8umV debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/db/9b836e24fc10eba22240ce0c8cee8e9fbbe84e.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy0_IPGo chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy0_IPGo cat '/tmp/MDcnXHegrm/objcopy0_IPGo' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy0_IPGo debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 5f40c5371f824d53964713366be64362b81b68de install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5f objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5f/40c5371f824d53964713366be64362b81b68de.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5f/40c5371f824d53964713366be64362b81b68de.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripNXvGHM debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripNXvGHM cat '/tmp/MDcnXHegrm/stripNXvGHM' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripNXvGHM debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5f/40c5371f824d53964713366be64362b81b68de.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy24pkD1 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy24pkD1 cat '/tmp/MDcnXHegrm/objcopy24pkD1' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy24pkD1 debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 f2421615c0787db16a0d5c8b2206f06221ec3612 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f2 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f2/421615c0787db16a0d5c8b2206f06221ec3612.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f2/421615c0787db16a0d5c8b2206f06221ec3612.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripGXqOHf debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripGXqOHf cat '/tmp/MDcnXHegrm/stripGXqOHf' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripGXqOHf debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f2/421615c0787db16a0d5c8b2206f06221ec3612.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy8Z8f0u chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy8Z8f0u cat '/tmp/MDcnXHegrm/objcopy8Z8f0u' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy8Z8f0u debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 8f1937af4818273b65b3c43b1833e650e568da21 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f/1937af4818273b65b3c43b1833e650e568da21.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f/1937af4818273b65b3c43b1833e650e568da21.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripRRgOt_ debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripRRgOt_ cat '/tmp/MDcnXHegrm/stripRRgOt_' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripRRgOt_ debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f/1937af4818273b65b3c43b1833e650e568da21.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyzjeQO0 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyzjeQO0 cat '/tmp/MDcnXHegrm/objcopyzjeQO0' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyzjeQO0 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 2b2a4768c0a6c379c40a7533889e4d4956da4c41 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2b objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2b/2a4768c0a6c379c40a7533889e4d4956da4c41.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2b/2a4768c0a6c379c40a7533889e4d4956da4c41.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripgNL8OA debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripgNL8OA cat '/tmp/MDcnXHegrm/stripgNL8OA' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripgNL8OA debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2b/2a4768c0a6c379c40a7533889e4d4956da4c41.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopypskGr7 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopypskGr7 cat '/tmp/MDcnXHegrm/objcopypskGr7' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopypskGr7 debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 3fcd2dffc62a94a7809ee623c6fe3f327a4e41d8 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3f objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3f/cd2dffc62a94a7809ee623c6fe3f327a4e41d8.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3f/cd2dffc62a94a7809ee623c6fe3f327a4e41d8.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripjNZ7UD debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripjNZ7UD cat '/tmp/MDcnXHegrm/stripjNZ7UD' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripjNZ7UD debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3f/cd2dffc62a94a7809ee623c6fe3f327a4e41d8.debug debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyWIcPYB chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyWIcPYB cat '/tmp/MDcnXHegrm/objcopyWIcPYB' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyWIcPYB debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 d285cce4771fd581e31a2dd081ab12d28e903ae5 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2/85cce4771fd581e31a2dd081ab12d28e903ae5.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2/85cce4771fd581e31a2dd081ab12d28e903ae5.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/strip7NnxnW debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/strip7NnxnW cat '/tmp/MDcnXHegrm/strip7NnxnW' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/strip7NnxnW debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2/85cce4771fd581e31a2dd081ab12d28e903ae5.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopysDD_pD chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopysDD_pD cat '/tmp/MDcnXHegrm/objcopysDD_pD' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopysDD_pD debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 191ba0f7131e6eb3e674f584f17451b2c7b9378e install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/19 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/19/1ba0f7131e6eb3e674f584f17451b2c7b9378e.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/19/1ba0f7131e6eb3e674f584f17451b2c7b9378e.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripqWL7Zm debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripqWL7Zm cat '/tmp/MDcnXHegrm/stripqWL7Zm' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripqWL7Zm debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/19/1ba0f7131e6eb3e674f584f17451b2c7b9378e.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyS3xEoh chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyS3xEoh cat '/tmp/MDcnXHegrm/objcopyS3xEoh' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyS3xEoh debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 7871127c2e78b4b9bb5812a63a9c613192afad9b install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/78 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/78/71127c2e78b4b9bb5812a63a9c613192afad9b.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/78/71127c2e78b4b9bb5812a63a9c613192afad9b.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/strip3lU_XS debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/strip3lU_XS cat '/tmp/MDcnXHegrm/strip3lU_XS' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/strip3lU_XS debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/78/71127c2e78b4b9bb5812a63a9c613192afad9b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy0AARrm chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy0AARrm cat '/tmp/MDcnXHegrm/objcopy0AARrm' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy0AARrm debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 12fbf1ee59659cd40971c138308f0d48f8ece453 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/12 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/12/fbf1ee59659cd40971c138308f0d48f8ece453.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/12/fbf1ee59659cd40971c138308f0d48f8ece453.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripDs7BoF debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripDs7BoF cat '/tmp/MDcnXHegrm/stripDs7BoF' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripDs7BoF debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/12/fbf1ee59659cd40971c138308f0d48f8ece453.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyzMwwyO chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyzMwwyO cat '/tmp/MDcnXHegrm/objcopyzMwwyO' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyzMwwyO debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 c7140d12d7edf34da957aad282690ce62a92c924 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7/140d12d7edf34da957aad282690ce62a92c924.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7/140d12d7edf34da957aad282690ce62a92c924.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/strip8xEW9a debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/strip8xEW9a cat '/tmp/MDcnXHegrm/strip8xEW9a' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/strip8xEW9a debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7/140d12d7edf34da957aad282690ce62a92c924.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopywgNSlr chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopywgNSlr cat '/tmp/MDcnXHegrm/objcopywgNSlr' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopywgNSlr debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 168ee15d920c27e138079d01a4b10afbcd5799a6 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/16 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/16/8ee15d920c27e138079d01a4b10afbcd5799a6.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/16/8ee15d920c27e138079d01a4b10afbcd5799a6.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripx4DVHy debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripx4DVHy cat '/tmp/MDcnXHegrm/stripx4DVHy' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripx4DVHy debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/16/8ee15d920c27e138079d01a4b10afbcd5799a6.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy7rTxz8 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy7rTxz8 cat '/tmp/MDcnXHegrm/objcopy7rTxz8' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy7rTxz8 debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 41fa4421da78add377ce80d2178e4e05d3b404a6 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/41 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/41/fa4421da78add377ce80d2178e4e05d3b404a6.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/41/fa4421da78add377ce80d2178e4e05d3b404a6.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/strip3WWKyZ debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/strip3WWKyZ cat '/tmp/MDcnXHegrm/strip3WWKyZ' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/strip3WWKyZ debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/41/fa4421da78add377ce80d2178e4e05d3b404a6.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyYDo1t7 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyYDo1t7 cat '/tmp/MDcnXHegrm/objcopyYDo1t7' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyYDo1t7 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 03dba96230ea546129f44c76d77758013454fad6 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/03 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/03/dba96230ea546129f44c76d77758013454fad6.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/03/dba96230ea546129f44c76d77758013454fad6.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripeAIF95 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripeAIF95 cat '/tmp/MDcnXHegrm/stripeAIF95' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripeAIF95 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/03/dba96230ea546129f44c76d77758013454fad6.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopywvKW2Y chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopywvKW2Y cat '/tmp/MDcnXHegrm/objcopywvKW2Y' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopywvKW2Y debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 379c36df427301bf13951c62a3efb9e190b97b1a install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/37 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/37/9c36df427301bf13951c62a3efb9e190b97b1a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/37/9c36df427301bf13951c62a3efb9e190b97b1a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripjslNCI debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripjslNCI cat '/tmp/MDcnXHegrm/stripjslNCI' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripjslNCI debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/37/9c36df427301bf13951c62a3efb9e190b97b1a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyll4SXy chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyll4SXy cat '/tmp/MDcnXHegrm/objcopyll4SXy' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyll4SXy debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 3be2da75a580b9b62b01957681924a36c1f21564 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3b objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3b/e2da75a580b9b62b01957681924a36c1f21564.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3b/e2da75a580b9b62b01957681924a36c1f21564.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripjZBFQT debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripjZBFQT cat '/tmp/MDcnXHegrm/stripjZBFQT' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripjZBFQT debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3b/e2da75a580b9b62b01957681924a36c1f21564.debug debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy_7CNd2 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy_7CNd2 cat '/tmp/MDcnXHegrm/objcopy_7CNd2' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy_7CNd2 debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 711d52d853d225c3038e255cc14e4e3788eee811 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/71 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/71/1d52d853d225c3038e255cc14e4e3788eee811.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/71/1d52d853d225c3038e255cc14e4e3788eee811.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripU0o6Xg debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripU0o6Xg cat '/tmp/MDcnXHegrm/stripU0o6Xg' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripU0o6Xg debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/71/1d52d853d225c3038e255cc14e4e3788eee811.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyly8NMn chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyly8NMn cat '/tmp/MDcnXHegrm/objcopyly8NMn' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyly8NMn debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 4a6ac0c883b2798c46bbe8a4d78e2f92909c562a install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4a/6ac0c883b2798c46bbe8a4d78e2f92909c562a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4a/6ac0c883b2798c46bbe8a4d78e2f92909c562a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripNda8MK debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripNda8MK cat '/tmp/MDcnXHegrm/stripNda8MK' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripNda8MK debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4a/6ac0c883b2798c46bbe8a4d78e2f92909c562a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy3FQYJN chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopy3FQYJN cat '/tmp/MDcnXHegrm/objcopy3FQYJN' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopy3FQYJN debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 578c8e6c8313fe40be9efb78c1c4dbcdceafe982 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57/8c8e6c8313fe40be9efb78c1c4dbcdceafe982.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57/8c8e6c8313fe40be9efb78c1c4dbcdceafe982.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/strip2_eXcC debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/strip2_eXcC cat '/tmp/MDcnXHegrm/strip2_eXcC' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/strip2_eXcC debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57/8c8e6c8313fe40be9efb78c1c4dbcdceafe982.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyDOtdPP chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyDOtdPP cat '/tmp/MDcnXHegrm/objcopyDOtdPP' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyDOtdPP debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 9a72153332e94f60e36b849485e657dbd3e40cb1 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9a/72153332e94f60e36b849485e657dbd3e40cb1.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9a/72153332e94f60e36b849485e657dbd3e40cb1.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripMG5mZ9 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripMG5mZ9 cat '/tmp/MDcnXHegrm/stripMG5mZ9' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripMG5mZ9 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9a/72153332e94f60e36b849485e657dbd3e40cb1.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyqKzj1U chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyqKzj1U cat '/tmp/MDcnXHegrm/objcopyqKzj1U' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyqKzj1U debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 53748c6291678d8efbf01f7dfc76ec9324419431 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/53 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/53/748c6291678d8efbf01f7dfc76ec9324419431.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/53/748c6291678d8efbf01f7dfc76ec9324419431.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripyo8Jk0 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripyo8Jk0 cat '/tmp/MDcnXHegrm/stripyo8Jk0' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripyo8Jk0 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/53/748c6291678d8efbf01f7dfc76ec9324419431.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyiixfsQ chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyiixfsQ cat '/tmp/MDcnXHegrm/objcopyiixfsQ' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyiixfsQ debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 06513501c3ce3ab0643f474d4bfcba6ae07ac720 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/06 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/06/513501c3ce3ab0643f474d4bfcba6ae07ac720.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/06/513501c3ce3ab0643f474d4bfcba6ae07ac720.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripHCn6KO debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripHCn6KO cat '/tmp/MDcnXHegrm/stripHCn6KO' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripHCn6KO debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/06/513501c3ce3ab0643f474d4bfcba6ae07ac720.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyxJkWwc chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyxJkWwc cat '/tmp/MDcnXHegrm/objcopyxJkWwc' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyxJkWwc debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 0aef2f937977c30a32e472e0c8b1b821d6effacb install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0a/ef2f937977c30a32e472e0c8b1b821d6effacb.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0a/ef2f937977c30a32e472e0c8b1b821d6effacb.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/strip5GG70a debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/strip5GG70a cat '/tmp/MDcnXHegrm/strip5GG70a' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/strip5GG70a debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0a/ef2f937977c30a32e472e0c8b1b821d6effacb.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopymrbSD2 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopymrbSD2 cat '/tmp/MDcnXHegrm/objcopymrbSD2' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopymrbSD2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 6def5ca01a22ab82b8b8eaac0b7621098ac24286 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d/ef5ca01a22ab82b8b8eaac0b7621098ac24286.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d/ef5ca01a22ab82b8b8eaac0b7621098ac24286.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripdD8TH1 debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripdD8TH1 cat '/tmp/MDcnXHegrm/stripdD8TH1' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripdD8TH1 debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d/ef5ca01a22ab82b8b8eaac0b7621098ac24286.debug debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyBl4_Ra chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyBl4_Ra cat '/tmp/MDcnXHegrm/objcopyBl4_Ra' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyBl4_Ra debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 96f4e630ee17f84c44c417d6f5feb0ad6fb10a98 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/96 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/96/f4e630ee17f84c44c417d6f5feb0ad6fb10a98.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/96/f4e630ee17f84c44c417d6f5feb0ad6fb10a98.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/strip0rAorX debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/strip0rAorX cat '/tmp/MDcnXHegrm/strip0rAorX' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/strip0rAorX debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/96/f4e630ee17f84c44c417d6f5feb0ad6fb10a98.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyS7lad4 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyS7lad4 cat '/tmp/MDcnXHegrm/objcopyS7lad4' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyS7lad4 debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 30f5eae84ddacc9e0dc5c3b264c14b25a0506421 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/30 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/30/f5eae84ddacc9e0dc5c3b264c14b25a0506421.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/30/f5eae84ddacc9e0dc5c3b264c14b25a0506421.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/strippehFGf debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/strippehFGf cat '/tmp/MDcnXHegrm/strippehFGf' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/strippehFGf debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/30/f5eae84ddacc9e0dc5c3b264c14b25a0506421.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyHiIEyi chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyHiIEyi cat '/tmp/MDcnXHegrm/objcopyHiIEyi' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyHiIEyi debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 650caaf845570c71e1a8ebef629cc6c0327ac57a install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/65 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/65/0caaf845570c71e1a8ebef629cc6c0327ac57a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/65/0caaf845570c71e1a8ebef629cc6c0327ac57a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripPk4c3j debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripPk4c3j cat '/tmp/MDcnXHegrm/stripPk4c3j' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripPk4c3j debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/65/0caaf845570c71e1a8ebef629cc6c0327ac57a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyLfNZpr chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyLfNZpr cat '/tmp/MDcnXHegrm/objcopyLfNZpr' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyLfNZpr debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 be91ba7c31f3ac7e9cd30b9587f9a15d221673bf install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/be objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/be/91ba7c31f3ac7e9cd30b9587f9a15d221673bf.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/be/91ba7c31f3ac7e9cd30b9587f9a15d221673bf.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripeowNQh debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripeowNQh cat '/tmp/MDcnXHegrm/stripeowNQh' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripeowNQh debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/be/91ba7c31f3ac7e9cd30b9587f9a15d221673bf.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyDQw9cl chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyDQw9cl cat '/tmp/MDcnXHegrm/objcopyDQw9cl' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyDQw9cl debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-312-s390x-linux-gnu.so debugedit: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-312-s390x-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 589aa154fd831aaacb1c8c803ab00266f6e622d8 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/58 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-312-s390x-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/58/9aa154fd831aaacb1c8c803ab00266f6e622d8.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/58/9aa154fd831aaacb1c8c803ab00266f6e622d8.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded -o /tmp/MDcnXHegrm/stripgV1I53 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-312-s390x-linux-gnu.so chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/stripgV1I53 cat '/tmp/MDcnXHegrm/stripgV1I53' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/stripgV1I53 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-312-s390x-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/58/9aa154fd831aaacb1c8c803ab00266f6e622d8.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyHy9zC1 chmod --reference debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-312-s390x-linux-gnu.so /tmp/MDcnXHegrm/objcopyHy9zC1 cat '/tmp/MDcnXHegrm/objcopyHy9zC1' > 'debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-312-s390x-linux-gnu.so' chmod --reference /tmp/MDcnXHegrm/objcopyHy9zC1 debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-312-s390x-linux-gnu.so debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens debugedit: debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens: Unknown DWARF DW_FORM_0x1f20 8c2fa9ce10f063ee265f4b93577d8a7f3aab8b5b install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8c objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8c/2fa9ce10f063ee265f4b93577d8a7f3aab8b5b.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8c/2fa9ce10f063ee265f4b93577d8a7f3aab8b5b.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/stripanTpl0 debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens /tmp/MDcnXHegrm/stripanTpl0 cat '/tmp/MDcnXHegrm/stripanTpl0' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens' chmod --reference /tmp/MDcnXHegrm/stripanTpl0 debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8c/2fa9ce10f063ee265f4b93577d8a7f3aab8b5b.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens /tmp/MDcnXHegrm/objcopyKZWTid chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens /tmp/MDcnXHegrm/objcopyKZWTid cat '/tmp/MDcnXHegrm/objcopyKZWTid' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens' chmod --reference /tmp/MDcnXHegrm/objcopyKZWTid debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_reparametrisation debugedit: debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_reparametrisation: Unknown DWARF DW_FORM_0x1f20 21cfc925120e9a1c2d3a864ef139897d8e763e18 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/21 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_reparametrisation debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/21/cfc925120e9a1c2d3a864ef139897d8e763e18.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/21/cfc925120e9a1c2d3a864ef139897d8e763e18.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/stripmH155Q debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_reparametrisation chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_reparametrisation /tmp/MDcnXHegrm/stripmH155Q cat '/tmp/MDcnXHegrm/stripmH155Q' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_reparametrisation' chmod --reference /tmp/MDcnXHegrm/stripmH155Q debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_reparametrisation objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/21/cfc925120e9a1c2d3a864ef139897d8e763e18.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_reparametrisation /tmp/MDcnXHegrm/objcopyfLEuqk chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_reparametrisation /tmp/MDcnXHegrm/objcopyfLEuqk cat '/tmp/MDcnXHegrm/objcopyfLEuqk' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_reparametrisation' chmod --reference /tmp/MDcnXHegrm/objcopyfLEuqk debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_reparametrisation debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_special_position debugedit: debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_special_position: Unknown DWARF DW_FORM_0x1f20 5d73d549d9ff54bec4b46319d072822d006a5cd1 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5d objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_special_position debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5d/73d549d9ff54bec4b46319d072822d006a5cd1.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5d/73d549d9ff54bec4b46319d072822d006a5cd1.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/stripO56lv9 debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_special_position chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_special_position /tmp/MDcnXHegrm/stripO56lv9 cat '/tmp/MDcnXHegrm/stripO56lv9' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_special_position' chmod --reference /tmp/MDcnXHegrm/stripO56lv9 debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_special_position objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5d/73d549d9ff54bec4b46319d072822d006a5cd1.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_special_position /tmp/MDcnXHegrm/objcopyywNn4s chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_special_position /tmp/MDcnXHegrm/objcopyywNn4s cat '/tmp/MDcnXHegrm/objcopyywNn4s' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_special_position' chmod --reference /tmp/MDcnXHegrm/objcopyywNn4s debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_special_position debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_svd debugedit: debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_svd: Unknown DWARF DW_FORM_0x1f20 608420a9a9b38e9dd230caa37f91c45b818181e5 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/60 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_svd debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/60/8420a9a9b38e9dd230caa37f91c45b818181e5.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/60/8420a9a9b38e9dd230caa37f91c45b818181e5.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/stripAEijMs debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_svd chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_svd /tmp/MDcnXHegrm/stripAEijMs cat '/tmp/MDcnXHegrm/stripAEijMs' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_svd' chmod --reference /tmp/MDcnXHegrm/stripAEijMs debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_svd objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/60/8420a9a9b38e9dd230caa37f91c45b818181e5.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_svd /tmp/MDcnXHegrm/objcopyE0CJoJ chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_svd /tmp/MDcnXHegrm/objcopyE0CJoJ cat '/tmp/MDcnXHegrm/objcopyE0CJoJ' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_svd' chmod --reference /tmp/MDcnXHegrm/objcopyE0CJoJ debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_svd debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_householder debugedit: debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_householder: Unknown DWARF DW_FORM_0x1f20 9e16d40e572b0497af91f346749f1bd6532de80f install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9e objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_householder debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9e/16d40e572b0497af91f346749f1bd6532de80f.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9e/16d40e572b0497af91f346749f1bd6532de80f.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/stripfYUOoq debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_householder chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_householder /tmp/MDcnXHegrm/stripfYUOoq cat '/tmp/MDcnXHegrm/stripfYUOoq' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_householder' chmod --reference /tmp/MDcnXHegrm/stripfYUOoq debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_householder objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9e/16d40e572b0497af91f346749f1bd6532de80f.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_householder /tmp/MDcnXHegrm/objcopyApZtvv chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_householder /tmp/MDcnXHegrm/objcopyApZtvv cat '/tmp/MDcnXHegrm/objcopyApZtvv' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_householder' chmod --reference /tmp/MDcnXHegrm/objcopyApZtvv debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_householder debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_givens debugedit: debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_givens: Unknown DWARF DW_FORM_0x1f20 7524965092b49fc6198c5948320d0be191647d31 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/75 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_givens debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/75/24965092b49fc6198c5948320d0be191647d31.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/75/24965092b49fc6198c5948320d0be191647d31.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/stripSea2ip debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_givens chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_givens /tmp/MDcnXHegrm/stripSea2ip cat '/tmp/MDcnXHegrm/stripSea2ip' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_givens' chmod --reference /tmp/MDcnXHegrm/stripSea2ip debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_givens objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/75/24965092b49fc6198c5948320d0be191647d31.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_givens /tmp/MDcnXHegrm/objcopyCFlgj8 chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_givens /tmp/MDcnXHegrm/objcopyCFlgj8 cat '/tmp/MDcnXHegrm/objcopyCFlgj8' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_givens' chmod --reference /tmp/MDcnXHegrm/objcopyCFlgj8 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_givens debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_cholesky debugedit: debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_cholesky: Unknown DWARF DW_FORM_0x1f20 15633230495c99482b2738d715ae8c547aee5ca0 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/15 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_cholesky debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/15/633230495c99482b2738d715ae8c547aee5ca0.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/15/633230495c99482b2738d715ae8c547aee5ca0.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/stripakxI4N debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_cholesky chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_cholesky /tmp/MDcnXHegrm/stripakxI4N cat '/tmp/MDcnXHegrm/stripakxI4N' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_cholesky' chmod --reference /tmp/MDcnXHegrm/stripakxI4N debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_cholesky objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/15/633230495c99482b2738d715ae8c547aee5ca0.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_cholesky /tmp/MDcnXHegrm/objcopyFhcpn5 chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_cholesky /tmp/MDcnXHegrm/objcopyFhcpn5 cat '/tmp/MDcnXHegrm/objcopyFhcpn5' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_cholesky' chmod --reference /tmp/MDcnXHegrm/objcopyFhcpn5 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_cholesky debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/serialization/tst_base_256 debugedit: debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/serialization/tst_base_256: Unknown DWARF DW_FORM_0x1f20 f19138e63173ae96a11b65c8e76903b3ef03e3a0 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f1 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/serialization/tst_base_256 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f1/9138e63173ae96a11b65c8e76903b3ef03e3a0.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f1/9138e63173ae96a11b65c8e76903b3ef03e3a0.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/strip4wD6jz debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/serialization/tst_base_256 chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/serialization/tst_base_256 /tmp/MDcnXHegrm/strip4wD6jz cat '/tmp/MDcnXHegrm/strip4wD6jz' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/serialization/tst_base_256' chmod --reference /tmp/MDcnXHegrm/strip4wD6jz debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/serialization/tst_base_256 objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f1/9138e63173ae96a11b65c8e76903b3ef03e3a0.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/serialization/tst_base_256 /tmp/MDcnXHegrm/objcopya0WDoY chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/serialization/tst_base_256 /tmp/MDcnXHegrm/objcopya0WDoY cat '/tmp/MDcnXHegrm/objcopya0WDoY' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/serialization/tst_base_256' chmod --reference /tmp/MDcnXHegrm/objcopya0WDoY debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/serialization/tst_base_256 debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/math/tests/tst debugedit: debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/math/tests/tst: Unknown DWARF DW_FORM_0x1f20 e39076063c78f0fa4a25ae005bee9cb5e33eff69 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e3 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/math/tests/tst debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e3/9076063c78f0fa4a25ae005bee9cb5e33eff69.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e3/9076063c78f0fa4a25ae005bee9cb5e33eff69.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/striphazlZb debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/math/tests/tst chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/math/tests/tst /tmp/MDcnXHegrm/striphazlZb cat '/tmp/MDcnXHegrm/striphazlZb' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/math/tests/tst' chmod --reference /tmp/MDcnXHegrm/striphazlZb debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/math/tests/tst objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e3/9076063c78f0fa4a25ae005bee9cb5e33eff69.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/math/tests/tst /tmp/MDcnXHegrm/objcopy7HhgUC chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/math/tests/tst /tmp/MDcnXHegrm/objcopy7HhgUC cat '/tmp/MDcnXHegrm/objcopy7HhgUC' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/math/tests/tst' chmod --reference /tmp/MDcnXHegrm/objcopy7HhgUC debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/math/tests/tst debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_ref_matrix_facet debugedit: debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_ref_matrix_facet: Unknown DWARF DW_FORM_0x1f20 555b44292a91d9d6894cff1e3eb310a72dd322f1 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/55 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_ref_matrix_facet debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/55/5b44292a91d9d6894cff1e3eb310a72dd322f1.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/55/5b44292a91d9d6894cff1e3eb310a72dd322f1.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/stripRvX6Yc debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_ref_matrix_facet chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_ref_matrix_facet /tmp/MDcnXHegrm/stripRvX6Yc cat '/tmp/MDcnXHegrm/stripRvX6Yc' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_ref_matrix_facet' chmod --reference /tmp/MDcnXHegrm/stripRvX6Yc debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_ref_matrix_facet objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/55/5b44292a91d9d6894cff1e3eb310a72dd322f1.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_ref_matrix_facet /tmp/MDcnXHegrm/objcopynHar9P chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_ref_matrix_facet /tmp/MDcnXHegrm/objcopynHar9P cat '/tmp/MDcnXHegrm/objcopynHar9P' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_ref_matrix_facet' chmod --reference /tmp/MDcnXHegrm/objcopynHar9P debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_ref_matrix_facet debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_rectangular_full_packed debugedit: debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_rectangular_full_packed: Unknown DWARF DW_FORM_0x1f20 82a490022cbe19de4e99b173f52ef9ad0a2e4c32 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/82 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_rectangular_full_packed debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/82/a490022cbe19de4e99b173f52ef9ad0a2e4c32.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/82/a490022cbe19de4e99b173f52ef9ad0a2e4c32.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/stripc4LCI1 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_rectangular_full_packed chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_rectangular_full_packed /tmp/MDcnXHegrm/stripc4LCI1 cat '/tmp/MDcnXHegrm/stripc4LCI1' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_rectangular_full_packed' chmod --reference /tmp/MDcnXHegrm/stripc4LCI1 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_rectangular_full_packed objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/82/a490022cbe19de4e99b173f52ef9ad0a2e4c32.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_rectangular_full_packed /tmp/MDcnXHegrm/objcopyIvmEuq chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_rectangular_full_packed /tmp/MDcnXHegrm/objcopyIvmEuq cat '/tmp/MDcnXHegrm/objcopyIvmEuq' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_rectangular_full_packed' chmod --reference /tmp/MDcnXHegrm/objcopyIvmEuq debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_rectangular_full_packed debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_accessors debugedit: debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_accessors: Unknown DWARF DW_FORM_0x1f20 417a0101862a6f36c29d49f21674c82885fc3dd6 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/41 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_accessors debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/41/7a0101862a6f36c29d49f21674c82885fc3dd6.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/41/7a0101862a6f36c29d49f21674c82885fc3dd6.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/stripleBpuG debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_accessors chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_accessors /tmp/MDcnXHegrm/stripleBpuG cat '/tmp/MDcnXHegrm/stripleBpuG' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_accessors' chmod --reference /tmp/MDcnXHegrm/stripleBpuG debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_accessors objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/41/7a0101862a6f36c29d49f21674c82885fc3dd6.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_accessors /tmp/MDcnXHegrm/objcopyTDniFz chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_accessors /tmp/MDcnXHegrm/objcopyTDniFz cat '/tmp/MDcnXHegrm/objcopyTDniFz' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_accessors' chmod --reference /tmp/MDcnXHegrm/objcopyTDniFz debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_accessors debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_2 debugedit: debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_2: Unknown DWARF DW_FORM_0x1f20 8e59a33f30f13de69de4658d36851daa0866519b install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8e objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_2 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8e/59a33f30f13de69de4658d36851daa0866519b.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8e/59a33f30f13de69de4658d36851daa0866519b.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/stripNzBcbD debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_2 chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_2 /tmp/MDcnXHegrm/stripNzBcbD cat '/tmp/MDcnXHegrm/stripNzBcbD' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_2' chmod --reference /tmp/MDcnXHegrm/stripNzBcbD debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_2 objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8e/59a33f30f13de69de4658d36851daa0866519b.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_2 /tmp/MDcnXHegrm/objcopysRZDCe chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_2 /tmp/MDcnXHegrm/objcopysRZDCe cat '/tmp/MDcnXHegrm/objcopysRZDCe' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_2' chmod --reference /tmp/MDcnXHegrm/objcopysRZDCe debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_2 debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_vec3 debugedit: debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_vec3: Unknown DWARF DW_FORM_0x1f20 a72b79247a8274fb5ec306456ae6fe4f23f5aff0 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a7 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_vec3 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a7/2b79247a8274fb5ec306456ae6fe4f23f5aff0.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a7/2b79247a8274fb5ec306456ae6fe4f23f5aff0.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/stripiZPVE2 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_vec3 chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_vec3 /tmp/MDcnXHegrm/stripiZPVE2 cat '/tmp/MDcnXHegrm/stripiZPVE2' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_vec3' chmod --reference /tmp/MDcnXHegrm/stripiZPVE2 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_vec3 objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a7/2b79247a8274fb5ec306456ae6fe4f23f5aff0.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_vec3 /tmp/MDcnXHegrm/objcopyuFHFUM chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_vec3 /tmp/MDcnXHegrm/objcopyuFHFUM cat '/tmp/MDcnXHegrm/objcopyuFHFUM' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_vec3' chmod --reference /tmp/MDcnXHegrm/objcopyuFHFUM debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_vec3 debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_1 debugedit: debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_1: Unknown DWARF DW_FORM_0x1f20 1fd02992ffca5d858fb71ef0ba763036e5ccb0da install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1f objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_1 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1f/d02992ffca5d858fb71ef0ba763036e5ccb0da.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1f/d02992ffca5d858fb71ef0ba763036e5ccb0da.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/strip1Uq8a8 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_1 chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_1 /tmp/MDcnXHegrm/strip1Uq8a8 cat '/tmp/MDcnXHegrm/strip1Uq8a8' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_1' chmod --reference /tmp/MDcnXHegrm/strip1Uq8a8 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_1 objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1f/d02992ffca5d858fb71ef0ba763036e5ccb0da.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_1 /tmp/MDcnXHegrm/objcopyhs8lpn chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_1 /tmp/MDcnXHegrm/objcopyhs8lpn cat '/tmp/MDcnXHegrm/objcopyhs8lpn' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_1' chmod --reference /tmp/MDcnXHegrm/objcopyhs8lpn debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_1 debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_sym_mat3 debugedit: debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_sym_mat3: Unknown DWARF DW_FORM_0x1f20 e41cd0018f27dd2b06b75b02ce28658377fc4552 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e4 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_sym_mat3 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e4/1cd0018f27dd2b06b75b02ce28658377fc4552.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e4/1cd0018f27dd2b06b75b02ce28658377fc4552.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/stripPP6w_c debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_sym_mat3 chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_sym_mat3 /tmp/MDcnXHegrm/stripPP6w_c cat '/tmp/MDcnXHegrm/stripPP6w_c' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_sym_mat3' chmod --reference /tmp/MDcnXHegrm/stripPP6w_c debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_sym_mat3 objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e4/1cd0018f27dd2b06b75b02ce28658377fc4552.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_sym_mat3 /tmp/MDcnXHegrm/objcopya2KbjD chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_sym_mat3 /tmp/MDcnXHegrm/objcopya2KbjD cat '/tmp/MDcnXHegrm/objcopya2KbjD' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_sym_mat3' chmod --reference /tmp/MDcnXHegrm/objcopya2KbjD debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_sym_mat3 debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_5 debugedit: debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_5: Unknown DWARF DW_FORM_0x1f20 5715bbda223dc87e70e0cdb36f16ca306942a543 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_5 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57/15bbda223dc87e70e0cdb36f16ca306942a543.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57/15bbda223dc87e70e0cdb36f16ca306942a543.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/stripwpQTtw debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_5 chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_5 /tmp/MDcnXHegrm/stripwpQTtw cat '/tmp/MDcnXHegrm/stripwpQTtw' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_5' chmod --reference /tmp/MDcnXHegrm/stripwpQTtw debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_5 objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57/15bbda223dc87e70e0cdb36f16ca306942a543.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_5 /tmp/MDcnXHegrm/objcopyq3ZueE chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_5 /tmp/MDcnXHegrm/objcopyq3ZueE cat '/tmp/MDcnXHegrm/objcopyq3ZueE' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_5' chmod --reference /tmp/MDcnXHegrm/objcopyq3ZueE debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_5 debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_optional_copy debugedit: debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_optional_copy: Unknown DWARF DW_FORM_0x1f20 a48016841d72ec305536d72d8f911577cef7913c install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a4 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_optional_copy debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a4/8016841d72ec305536d72d8f911577cef7913c.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a4/8016841d72ec305536d72d8f911577cef7913c.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/strip4eHwKO debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_optional_copy chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_optional_copy /tmp/MDcnXHegrm/strip4eHwKO cat '/tmp/MDcnXHegrm/strip4eHwKO' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_optional_copy' chmod --reference /tmp/MDcnXHegrm/strip4eHwKO debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_optional_copy objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a4/8016841d72ec305536d72d8f911577cef7913c.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_optional_copy /tmp/MDcnXHegrm/objcopys6Ol2l chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_optional_copy /tmp/MDcnXHegrm/objcopys6Ol2l cat '/tmp/MDcnXHegrm/objcopys6Ol2l' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_optional_copy' chmod --reference /tmp/MDcnXHegrm/objcopys6Ol2l debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_optional_copy debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_unsigned_float_arithmetic debugedit: debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_unsigned_float_arithmetic: Unknown DWARF DW_FORM_0x1f21 e72e8bf8f757cc32aab9dc15ae55606c5cfa12d4 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e7 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_unsigned_float_arithmetic debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e7/2e8bf8f757cc32aab9dc15ae55606c5cfa12d4.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e7/2e8bf8f757cc32aab9dc15ae55606c5cfa12d4.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/stripBBCaNM debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_unsigned_float_arithmetic chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_unsigned_float_arithmetic /tmp/MDcnXHegrm/stripBBCaNM cat '/tmp/MDcnXHegrm/stripBBCaNM' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_unsigned_float_arithmetic' chmod --reference /tmp/MDcnXHegrm/stripBBCaNM debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_unsigned_float_arithmetic objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e7/2e8bf8f757cc32aab9dc15ae55606c5cfa12d4.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_unsigned_float_arithmetic /tmp/MDcnXHegrm/objcopy41wTII chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_unsigned_float_arithmetic /tmp/MDcnXHegrm/objcopy41wTII cat '/tmp/MDcnXHegrm/objcopy41wTII' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_unsigned_float_arithmetic' chmod --reference /tmp/MDcnXHegrm/objcopy41wTII debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_unsigned_float_arithmetic debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_4 debugedit: debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_4: Unknown DWARF DW_FORM_0x1f20 a78b250c3d9f99aa7cd9aba3e65096c0ecf83311 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a7 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_4 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a7/8b250c3d9f99aa7cd9aba3e65096c0ecf83311.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a7/8b250c3d9f99aa7cd9aba3e65096c0ecf83311.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/striphSLWIr debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_4 chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_4 /tmp/MDcnXHegrm/striphSLWIr cat '/tmp/MDcnXHegrm/striphSLWIr' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_4' chmod --reference /tmp/MDcnXHegrm/striphSLWIr debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_4 objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a7/8b250c3d9f99aa7cd9aba3e65096c0ecf83311.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_4 /tmp/MDcnXHegrm/objcopyO28Hct chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_4 /tmp/MDcnXHegrm/objcopyO28Hct cat '/tmp/MDcnXHegrm/objcopyO28Hct' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_4' chmod --reference /tmp/MDcnXHegrm/objcopyO28Hct debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_4 debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_mat3 debugedit: debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_mat3: Unknown DWARF DW_FORM_0x1f20 f8e7279909e1ae8cdfa613be10db6f78170d137f install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f8 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_mat3 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f8/e7279909e1ae8cdfa613be10db6f78170d137f.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f8/e7279909e1ae8cdfa613be10db6f78170d137f.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/stripaDuLye debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_mat3 chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_mat3 /tmp/MDcnXHegrm/stripaDuLye cat '/tmp/MDcnXHegrm/stripaDuLye' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_mat3' chmod --reference /tmp/MDcnXHegrm/stripaDuLye debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_mat3 objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f8/e7279909e1ae8cdfa613be10db6f78170d137f.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_mat3 /tmp/MDcnXHegrm/objcopyJnNnDd chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_mat3 /tmp/MDcnXHegrm/objcopyJnNnDd cat '/tmp/MDcnXHegrm/objcopyJnNnDd' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_mat3' chmod --reference /tmp/MDcnXHegrm/objcopyJnNnDd debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_mat3 debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_3 debugedit: debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_3: Unknown DWARF DW_FORM_0x1f20 f0139a386fd7655e7a07679e67868bd45782c2f0 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f0 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_3 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f0/139a386fd7655e7a07679e67868bd45782c2f0.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f0/139a386fd7655e7a07679e67868bd45782c2f0.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/stripD79OYz debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_3 chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_3 /tmp/MDcnXHegrm/stripD79OYz cat '/tmp/MDcnXHegrm/stripD79OYz' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_3' chmod --reference /tmp/MDcnXHegrm/stripD79OYz debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_3 objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f0/139a386fd7655e7a07679e67868bd45782c2f0.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_3 /tmp/MDcnXHegrm/objcopycE24se chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_3 /tmp/MDcnXHegrm/objcopycE24se cat '/tmp/MDcnXHegrm/objcopycE24se' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_3' chmod --reference /tmp/MDcnXHegrm/objcopycE24se debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_3 debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/lbfgs/tst_lbfgs debugedit: debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/lbfgs/tst_lbfgs: Unknown DWARF DW_FORM_0x1f20 b305143cc735c378b5f19f527dc21a25a5dc461f install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b3 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/lbfgs/tst_lbfgs debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b3/05143cc735c378b5f19f527dc21a25a5dc461f.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b3/05143cc735c378b5f19f527dc21a25a5dc461f.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/stripcdzk59 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/lbfgs/tst_lbfgs chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/lbfgs/tst_lbfgs /tmp/MDcnXHegrm/stripcdzk59 cat '/tmp/MDcnXHegrm/stripcdzk59' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/lbfgs/tst_lbfgs' chmod --reference /tmp/MDcnXHegrm/stripcdzk59 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/lbfgs/tst_lbfgs objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b3/05143cc735c378b5f19f527dc21a25a5dc461f.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/lbfgs/tst_lbfgs /tmp/MDcnXHegrm/objcopycwcPMt chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/lbfgs/tst_lbfgs /tmp/MDcnXHegrm/objcopycwcPMt cat '/tmp/MDcnXHegrm/objcopycwcPMt' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/lbfgs/tst_lbfgs' chmod --reference /tmp/MDcnXHegrm/objcopycwcPMt debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/lbfgs/tst_lbfgs debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/error/tst_error debugedit: debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/error/tst_error: Unknown DWARF DW_FORM_0x1f20 1cc650ca6c972d0a8c476ed0787eaf1a5d006a7a install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1c objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/error/tst_error debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1c/c650ca6c972d0a8c476ed0787eaf1a5d006a7a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1c/c650ca6c972d0a8c476ed0787eaf1a5d006a7a.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/stripp4giIC debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/error/tst_error chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/error/tst_error /tmp/MDcnXHegrm/stripp4giIC cat '/tmp/MDcnXHegrm/stripp4giIC' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/error/tst_error' chmod --reference /tmp/MDcnXHegrm/stripp4giIC debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/error/tst_error objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1c/c650ca6c972d0a8c476ed0787eaf1a5d006a7a.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/error/tst_error /tmp/MDcnXHegrm/objcopyjBv0ju chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/error/tst_error /tmp/MDcnXHegrm/objcopyjBv0ju cat '/tmp/MDcnXHegrm/objcopyjBv0ju' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/error/tst_error' chmod --reference /tmp/MDcnXHegrm/objcopyjBv0ju debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/error/tst_error debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/cctbx/python3.12/boost_adaptbx/tests/tst_optional_copy debugedit: debian/python3-cctbx/usr/lib/cctbx/python3.12/boost_adaptbx/tests/tst_optional_copy: Unknown DWARF DW_FORM_0x1f20 9ce39756c89a0053828fbd828e65b47e677ed608 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/boost_adaptbx/tests/tst_optional_copy debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c/e39756c89a0053828fbd828e65b47e677ed608.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c/e39756c89a0053828fbd828e65b47e677ed608.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/stripFdMCrQ debian/python3-cctbx/usr/lib/cctbx/python3.12/boost_adaptbx/tests/tst_optional_copy chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/boost_adaptbx/tests/tst_optional_copy /tmp/MDcnXHegrm/stripFdMCrQ cat '/tmp/MDcnXHegrm/stripFdMCrQ' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/boost_adaptbx/tests/tst_optional_copy' chmod --reference /tmp/MDcnXHegrm/stripFdMCrQ debian/python3-cctbx/usr/lib/cctbx/python3.12/boost_adaptbx/tests/tst_optional_copy objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c/e39756c89a0053828fbd828e65b47e677ed608.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/boost_adaptbx/tests/tst_optional_copy /tmp/MDcnXHegrm/objcopyVZbkyC chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/boost_adaptbx/tests/tst_optional_copy /tmp/MDcnXHegrm/objcopyVZbkyC cat '/tmp/MDcnXHegrm/objcopyVZbkyC' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/boost_adaptbx/tests/tst_optional_copy' chmod --reference /tmp/MDcnXHegrm/objcopyVZbkyC debian/python3-cctbx/usr/lib/cctbx/python3.12/boost_adaptbx/tests/tst_optional_copy debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/lib/cctbx/python3.12/iotbx/pdb/hybrid_36_fem debugedit: debian/python3-cctbx/usr/lib/cctbx/python3.12/iotbx/pdb/hybrid_36_fem: Unknown DWARF DW_FORM_0x1f20 f96466eae1930f1bcfb15d8836d26f5564aff8f0 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f9 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/iotbx/pdb/hybrid_36_fem debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f9/6466eae1930f1bcfb15d8836d26f5564aff8f0.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f9/6466eae1930f1bcfb15d8836d26f5564aff8f0.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/stripdp95aX debian/python3-cctbx/usr/lib/cctbx/python3.12/iotbx/pdb/hybrid_36_fem chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/iotbx/pdb/hybrid_36_fem /tmp/MDcnXHegrm/stripdp95aX cat '/tmp/MDcnXHegrm/stripdp95aX' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/iotbx/pdb/hybrid_36_fem' chmod --reference /tmp/MDcnXHegrm/stripdp95aX debian/python3-cctbx/usr/lib/cctbx/python3.12/iotbx/pdb/hybrid_36_fem objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f9/6466eae1930f1bcfb15d8836d26f5564aff8f0.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/iotbx/pdb/hybrid_36_fem /tmp/MDcnXHegrm/objcopyryDyoP chmod --reference debian/python3-cctbx/usr/lib/cctbx/python3.12/iotbx/pdb/hybrid_36_fem /tmp/MDcnXHegrm/objcopyryDyoP cat '/tmp/MDcnXHegrm/objcopyryDyoP' > 'debian/python3-cctbx/usr/lib/cctbx/python3.12/iotbx/pdb/hybrid_36_fem' chmod --reference /tmp/MDcnXHegrm/objcopyryDyoP debian/python3-cctbx/usr/lib/cctbx/python3.12/iotbx/pdb/hybrid_36_fem debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry debugedit: debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry: Unknown DWARF DW_FORM_0x1f20 d7a8f8ce7570d34265c19eeb0fa755037d3dcf07 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d7 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d7/a8f8ce7570d34265c19eeb0fa755037d3dcf07.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d7/a8f8ce7570d34265c19eeb0fa755037d3dcf07.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/strip2qQKO9 debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry chmod --reference debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry /tmp/MDcnXHegrm/strip2qQKO9 cat '/tmp/MDcnXHegrm/strip2qQKO9' > 'debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry' chmod --reference /tmp/MDcnXHegrm/strip2qQKO9 debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d7/a8f8ce7570d34265c19eeb0fa755037d3dcf07.debug debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry /tmp/MDcnXHegrm/objcopyUPnm8t chmod --reference debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry /tmp/MDcnXHegrm/objcopyUPnm8t cat '/tmp/MDcnXHegrm/objcopyUPnm8t' > 'debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry' chmod --reference /tmp/MDcnXHegrm/objcopyUPnm8t debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/bin/cctbx_blobs debugedit: debian/python3-cctbx/usr/bin/cctbx_blobs: Unknown DWARF DW_FORM_0x1f20 00b70c2dff9d645db477283c5212cdf97eb39278 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/00 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx_blobs debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/00/b70c2dff9d645db477283c5212cdf97eb39278.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/00/b70c2dff9d645db477283c5212cdf97eb39278.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/stripThOczr debian/python3-cctbx/usr/bin/cctbx_blobs chmod --reference debian/python3-cctbx/usr/bin/cctbx_blobs /tmp/MDcnXHegrm/stripThOczr cat '/tmp/MDcnXHegrm/stripThOczr' > 'debian/python3-cctbx/usr/bin/cctbx_blobs' chmod --reference /tmp/MDcnXHegrm/stripThOczr debian/python3-cctbx/usr/bin/cctbx_blobs objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/00/b70c2dff9d645db477283c5212cdf97eb39278.debug debian/python3-cctbx/usr/bin/cctbx_blobs /tmp/MDcnXHegrm/objcopyajo_nR chmod --reference debian/python3-cctbx/usr/bin/cctbx_blobs /tmp/MDcnXHegrm/objcopyajo_nR cat '/tmp/MDcnXHegrm/objcopyajo_nR' > 'debian/python3-cctbx/usr/bin/cctbx_blobs' chmod --reference /tmp/MDcnXHegrm/objcopyajo_nR debian/python3-cctbx/usr/bin/cctbx_blobs debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/bin/cbflib.tst_memory debugedit: debian/python3-cctbx/usr/bin/cbflib.tst_memory: Unknown DWARF DW_FORM_0x1f20 8873707c4740c5aa9b919c20ba750c7cae376923 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/88 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cbflib.tst_memory debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/88/73707c4740c5aa9b919c20ba750c7cae376923.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/88/73707c4740c5aa9b919c20ba750c7cae376923.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/stripvjuHdC debian/python3-cctbx/usr/bin/cbflib.tst_memory chmod --reference debian/python3-cctbx/usr/bin/cbflib.tst_memory /tmp/MDcnXHegrm/stripvjuHdC cat '/tmp/MDcnXHegrm/stripvjuHdC' > 'debian/python3-cctbx/usr/bin/cbflib.tst_memory' chmod --reference /tmp/MDcnXHegrm/stripvjuHdC debian/python3-cctbx/usr/bin/cbflib.tst_memory objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/88/73707c4740c5aa9b919c20ba750c7cae376923.debug debian/python3-cctbx/usr/bin/cbflib.tst_memory /tmp/MDcnXHegrm/objcopypT0EYW chmod --reference debian/python3-cctbx/usr/bin/cbflib.tst_memory /tmp/MDcnXHegrm/objcopypT0EYW cat '/tmp/MDcnXHegrm/objcopypT0EYW' > 'debian/python3-cctbx/usr/bin/cbflib.tst_memory' chmod --reference /tmp/MDcnXHegrm/objcopypT0EYW debian/python3-cctbx/usr/bin/cbflib.tst_memory debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups debugedit: debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups: Unknown DWARF DW_FORM_0x1f21 dcae88799ecaf4fc8df11c00de2c11d0b235fee9 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/dc objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/dc/ae88799ecaf4fc8df11c00de2c11d0b235fee9.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/dc/ae88799ecaf4fc8df11c00de2c11d0b235fee9.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/stripa3JUSj debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups chmod --reference debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups /tmp/MDcnXHegrm/stripa3JUSj cat '/tmp/MDcnXHegrm/stripa3JUSj' > 'debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups' chmod --reference /tmp/MDcnXHegrm/stripa3JUSj debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/dc/ae88799ecaf4fc8df11c00de2c11d0b235fee9.debug debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups /tmp/MDcnXHegrm/objcopyPNnCfQ chmod --reference debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups /tmp/MDcnXHegrm/objcopyPNnCfQ cat '/tmp/MDcnXHegrm/objcopyPNnCfQ' > 'debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups' chmod --reference /tmp/MDcnXHegrm/objcopyPNnCfQ debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites debugedit: debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites: Unknown DWARF DW_FORM_0x1f20 b4048c96b496b9cd242420171debccb08769e974 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/048c96b496b9cd242420171debccb08769e974.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/048c96b496b9cd242420171debccb08769e974.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/stripZ66_wc debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites chmod --reference debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites /tmp/MDcnXHegrm/stripZ66_wc cat '/tmp/MDcnXHegrm/stripZ66_wc' > 'debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites' chmod --reference /tmp/MDcnXHegrm/stripZ66_wc debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/048c96b496b9cd242420171debccb08769e974.debug debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites /tmp/MDcnXHegrm/objcopyGwGJat chmod --reference debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites /tmp/MDcnXHegrm/objcopyGwGJat cat '/tmp/MDcnXHegrm/objcopyGwGJat' > 'debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites' chmod --reference /tmp/MDcnXHegrm/objcopyGwGJat debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/bin/cctbx.find_distances debugedit: debian/python3-cctbx/usr/bin/cctbx.find_distances: Unknown DWARF DW_FORM_0x1f20 a49b6145932e543566a471fb79d0fd91ff4ce403 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a4 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx.find_distances debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a4/9b6145932e543566a471fb79d0fd91ff4ce403.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a4/9b6145932e543566a471fb79d0fd91ff4ce403.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/stripME9Bj3 debian/python3-cctbx/usr/bin/cctbx.find_distances chmod --reference debian/python3-cctbx/usr/bin/cctbx.find_distances /tmp/MDcnXHegrm/stripME9Bj3 cat '/tmp/MDcnXHegrm/stripME9Bj3' > 'debian/python3-cctbx/usr/bin/cctbx.find_distances' chmod --reference /tmp/MDcnXHegrm/stripME9Bj3 debian/python3-cctbx/usr/bin/cctbx.find_distances objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a4/9b6145932e543566a471fb79d0fd91ff4ce403.debug debian/python3-cctbx/usr/bin/cctbx.find_distances /tmp/MDcnXHegrm/objcopyFk7ENb chmod --reference debian/python3-cctbx/usr/bin/cctbx.find_distances /tmp/MDcnXHegrm/objcopyFk7ENb cat '/tmp/MDcnXHegrm/objcopyFk7ENb' > 'debian/python3-cctbx/usr/bin/cctbx.find_distances' chmod --reference /tmp/MDcnXHegrm/objcopyFk7ENb debian/python3-cctbx/usr/bin/cctbx.find_distances debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib debugedit: debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib: Unknown DWARF DW_FORM_0x1f20 6981b84e210599312e265f676ca7e1b0c3292a58 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/69 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/69/81b84e210599312e265f676ca7e1b0c3292a58.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/69/81b84e210599312e265f676ca7e1b0c3292a58.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/stripPCGdrP debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib chmod --reference debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib /tmp/MDcnXHegrm/stripPCGdrP cat '/tmp/MDcnXHegrm/stripPCGdrP' > 'debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib' chmod --reference /tmp/MDcnXHegrm/stripPCGdrP debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/69/81b84e210599312e265f676ca7e1b0c3292a58.debug debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib /tmp/MDcnXHegrm/objcopye0kxk3 chmod --reference debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib /tmp/MDcnXHegrm/objcopye0kxk3 cat '/tmp/MDcnXHegrm/objcopye0kxk3' > 'debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib' chmod --reference /tmp/MDcnXHegrm/objcopye0kxk3 debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib debugedit --build-id --build-id-seed=python3-cctbx/2023.12\+ds2\+\~3.17.0\+ds1-4build2 debian/python3-cctbx/usr/bin/cctbx.getting_started debugedit: debian/python3-cctbx/usr/bin/cctbx.getting_started: Unknown DWARF DW_FORM_0x1f20 30c09a36006e6eb66cc829615b0d866aeb0fa262 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/30 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx.getting_started debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/30/c09a36006e6eb66cc829615b0d866aeb0fa262.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/30/c09a36006e6eb66cc829615b0d866aeb0fa262.debug strip --remove-section=.comment --remove-section=.note -o /tmp/MDcnXHegrm/stripl_mx9I debian/python3-cctbx/usr/bin/cctbx.getting_started chmod --reference debian/python3-cctbx/usr/bin/cctbx.getting_started /tmp/MDcnXHegrm/stripl_mx9I cat '/tmp/MDcnXHegrm/stripl_mx9I' > 'debian/python3-cctbx/usr/bin/cctbx.getting_started' chmod --reference /tmp/MDcnXHegrm/stripl_mx9I debian/python3-cctbx/usr/bin/cctbx.getting_started objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/30/c09a36006e6eb66cc829615b0d866aeb0fa262.debug debian/python3-cctbx/usr/bin/cctbx.getting_started /tmp/MDcnXHegrm/objcopyYEbHuf chmod --reference debian/python3-cctbx/usr/bin/cctbx.getting_started /tmp/MDcnXHegrm/objcopyYEbHuf cat '/tmp/MDcnXHegrm/objcopyYEbHuf' > 'debian/python3-cctbx/usr/bin/cctbx.getting_started' chmod --reference /tmp/MDcnXHegrm/objcopyYEbHuf debian/python3-cctbx/usr/bin/cctbx.getting_started install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/python3-cctbx/usr/lib/debug/.dwz/s390x-linux-gnu debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/python3-cctbx/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/python3-cctbx/usr/lib/debug install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/share/doc ln -s python3-cctbx debian/.debhelper/python3-cctbx/dbgsym-root/usr/share/doc/python3-cctbx-dbgsym install -m0755 -d debian/.debhelper/python3-cctbx dh_makeshlibs -a -O--buildsystem=pybuild rm -f debian/libcctbx0/DEBIAN/shlibs install -m0755 -d debian/libcctbx0/DEBIAN echo "libann_adaptor 0 libcctbx0 (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libasymmetric_map 0 libcctbx0 (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libcbf-private 0 libcctbx0 (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libccp4io 0 libcctbx0 (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libcctbx 0 libcctbx0 (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libcctbx_sgtbx_asu 0 libcctbx0 (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libdxtbxspotfinder 0 libcctbx0 (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libiotbx_mtz 0 libcctbx0 (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libiotbx_pdb 0 libcctbx0 (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libiotbx_xplor 0 libcctbx0 (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libmmtbx_masks 0 libcctbx0 (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libmmtbx_tls 0 libcctbx0 (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libomptbx 0 libcctbx0 (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "librstbx 0 libcctbx0 (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libscitbx_boost_python 0 libcctbx0 (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libscitbx_minpack 0 libcctbx0 (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libscitbx_slatec 0 libcctbx0 (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libsmtbx_refinement_constraints 0 libcctbx0 (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libspotfinder 0 libcctbx0 (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs chmod 0644 -- debian/libcctbx0/DEBIAN/shlibs mv debian/.debhelper/generated/libcctbx0/triggers.new debian/.debhelper/generated/libcctbx0/triggers rm -f debian/libcctbx-dev/DEBIAN/shlibs rm -f debian/python3-cctbx/DEBIAN/shlibs install -m0755 -d debian/python3-cctbx/DEBIAN echo "annlib_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "boost_adaptbx_boost_thread_test_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "boost_adaptbx_graph_breadth_first_search_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "boost_adaptbx_graph_clustering_algorithm_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "boost_adaptbx_graph_connected_component_algorithm_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "boost_adaptbx_graph_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "boost_adaptbx_graph_graph_structure_comparison_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "boost_adaptbx_graph_maximum_clique_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "boost_adaptbx_graph_metric_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "boost_adaptbx_graph_min_cut_max_flow_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "boost_adaptbx_graph_utility_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "boost_adaptbx_python_streambuf_test_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "boost_optional_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "boost_python_hybrid_times_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "boost_python_meta_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "boost_rational_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "boost_tuple_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cbflib_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "ccp4io_adaptbx_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_adp_restraints_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_adptbx_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_anharmonic_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_array_family_flex_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_asymmetric_map_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_covariance_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_crystal_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_dmtbx_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_eltbx_attenuation_coefficient_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_eltbx_chemical_elements_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_eltbx_covalent_radii_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_eltbx_fp_fdp_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_eltbx_henke_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_eltbx_icsd_radii_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_eltbx_neutron_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_eltbx_sasaki_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_eltbx_tiny_pse_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_eltbx_wavelengths_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_eltbx_xray_scattering_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_emma_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_french_wilson_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_geometry_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_geometry_restraints_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_maptbx_bcr_bcr_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_maptbx_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_masks_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_math_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_merging_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_miller_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_multipolar_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_orientation_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_sgtbx_asu_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_sgtbx_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_statistics_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_symmetry_search_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_translation_search_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_uctbx_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_xray_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cctbx_xray_observations_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "cma_es_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "determine_unit_cell_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "dxtbx_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "dxtbx_flumpy 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "dxtbx_format_image_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "dxtbx_format_nexus_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "dxtbx_imageset_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "dxtbx_masking_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "dxtbx_model_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "fable_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "gltbx_fonts_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "gltbx_gl_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "gltbx_glu_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "gltbx_quadrics_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "gltbx_util_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "gltbx_viewer_utils_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "iotbx_ccp4_map_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "iotbx_cif_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "iotbx_detectors_bruker_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "iotbx_detectors_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "iotbx_dsn6_map_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "iotbx_dtrek_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "iotbx_mtz_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "iotbx_pdb_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "iotbx_pdb_hierarchy_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "iotbx_scalepack_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "iotbx_shelx_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "iotbx_wildcard_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "iotbx_xplor_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_alignment_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_building_loop_closure_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_bulk_solvent_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_cablam_align_utils_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_den_restraints_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_dssp_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_dynamics_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_f_model_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_geometry_asa_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_geometry_clash_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_geometry_indexing_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_geometry_primitive_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_geometry_shared_types_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_geometry_sphere_surface_sampling_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_hydrogens_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_masks_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_max_lik_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_mosaic_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_ncs_cartesian_restraints_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_ncs_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_pair_interaction_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_probe_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_ramachandran_restraints_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_reduce_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_reference_coordinate_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_rotamer_fit_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_rsr_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_scaling_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_secondary_structure_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_tls_decompose_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_tls_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_tls_optimise_amplitudes_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_tls_utils_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_utils_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "mmtbx_validation_ramachandran_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "omptbx_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "regression_test_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "rstbx_array_family_flex_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "rstbx_bandpass_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "rstbx_bpcx_detector_model_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "rstbx_diffraction_fastbragg_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "rstbx_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "rstbx_indexing_api_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "rstbx_integration_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "rstbx_simage_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "rstbx_simulation_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "rstbx_symmetry_constraints_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "scitbx_array_family_flex_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "scitbx_array_family_shared_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "scitbx_cubicle_neighbors_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "scitbx_fftpack_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "scitbx_glmtbx_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "scitbx_graphics_utils_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "scitbx_iso_surface_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "scitbx_lbfgs_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "scitbx_lbfgsb_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "scitbx_linalg_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "scitbx_lstbx_normal_equations_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "scitbx_math_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "scitbx_minpack_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "scitbx_r3_utils_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "scitbx_random_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "scitbx_rigid_body_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "scitbx_sparse_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "scitbx_stl_map_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "scitbx_stl_set_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "scitbx_stl_vector_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "scitbx_suffixtree_shared_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "scitbx_suffixtree_single_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "scitbx_wigner_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "smtbx_ab_initio_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "smtbx_array_family_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "smtbx_refinement_constraints_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "smtbx_refinement_least_squares_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "smtbx_refinement_restraints_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "smtbx_stl_map_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "smtbx_structure_factors_direct_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "spotfinder_array_family_flex_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "spotfinder_distltbx_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "spotfinder_dxtbx_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "spotfinder_hough_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs echo "std_pair_ext 0 python3-cctbx (>= 2023.12+ds2+~3.17.0+ds1)" >> debian/python3-cctbx/DEBIAN/shlibs chmod 0644 -- debian/python3-cctbx/DEBIAN/shlibs mv debian/.debhelper/generated/python3-cctbx/triggers.new debian/.debhelper/generated/python3-cctbx/triggers dh_shlibdeps -a -O--buildsystem=pybuild install -m0755 -d debian/libcctbx0/DEBIAN dpkg-shlibdeps -Tdebian/libcctbx0.substvars debian/libcctbx0/usr/lib/s390x-linux-gnu/librstbx.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_minpack.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libomptbx.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_mtz.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libcbf-private.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libcctbx.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_slatec.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libccp4io.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libmmtbx_masks.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libspotfinder.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libmmtbx_tls.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libasymmetric_map.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libann_adaptor.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_xplor.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libdxtbxspotfinder.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_boost_python.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libiotbx_pdb.so.0.0.1 debian/libcctbx0/usr/lib/s390x-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 install -m0755 -d debian/python3-cctbx/DEBIAN dpkg-shlibdeps -Tdebian/python3-cctbx.substvars debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_reparametrisation debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_special_position debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_svd debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_householder debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_givens debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_cholesky debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/serialization/tst_base_256 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/math/tests/tst debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_ref_matrix_facet debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_rectangular_full_packed debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_accessors debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_2 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_vec3 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_1 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_sym_mat3 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_5 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_optional_copy debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_unsigned_float_arithmetic debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_4 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_mat3 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_3 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/lbfgs/tst_lbfgs debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/error/tst_error debian/python3-cctbx/usr/lib/cctbx/python3.12/boost_adaptbx/tests/tst_optional_copy debian/python3-cctbx/usr/lib/cctbx/python3.12/iotbx/pdb/hybrid_36_fem debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_cablam_align_utils_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-312-s390x-linux-gnu.so debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry debian/python3-cctbx/usr/bin/cctbx_blobs debian/python3-cctbx/usr/bin/cbflib.tst_memory debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites debian/python3-cctbx/usr/bin/cctbx.find_distances debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib debian/python3-cctbx/usr/bin/cctbx.getting_started dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 28 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_Type: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyTuple_New: it's probably a plugin dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: symbol PyObject_CallFunction used by debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol PyExc_RuntimeError used by debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol PyRange_Type used by debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol _Py_Dealloc used by debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol PyErr_SetString used by debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol PyExc_IndexError used by debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol _Py_NoneStruct used by debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol PyObject_IsTrue used by debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol PyImport_ImportModule used by debian/libcctbx0/usr/lib/s390x-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyTuple_New: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PySlice_Type: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyExc_IndexError: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyErr_SetString: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 23 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyErr_Clear: it's probably a plugin dpkg-shlibdeps: warning: 29 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyErr_Clear: it's probably a plugin dpkg-shlibdeps: warning: 26 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyList_Type: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 11 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyBytes_FromStringAndSize: it's probably a plugin dpkg-shlibdeps: warning: 30 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyErr_Occurred: it's probably a plugin dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 17 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyObject_HasAttrString: it's probably a plugin dpkg-shlibdeps: warning: 22 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_cablam_align_utils_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 15 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyTuple_New: it's probably a plugin dpkg-shlibdeps: warning: 2 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 17 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyIter_Check: it's probably a plugin dpkg-shlibdeps: warning: 22 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyList_New: it's probably a plugin dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 19 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld64.so.1.usr-is-merged dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyException_SetContext: it's probably a plugin dpkg-shlibdeps: warning: 124 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 17 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 19 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 21 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 24 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyExc_StopIteration: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyList_Type: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyComplex_Type: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyTuple_Type: it's probably a plugin dpkg-shlibdeps: warning: 16 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyExc_StopIteration: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyObject_Size: it's probably a plugin dpkg-shlibdeps: warning: 50 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 16 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyObject_GetIter: it's probably a plugin dpkg-shlibdeps: warning: 25 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyList_Type: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 16 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 18 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyErr_Clear: it's probably a plugin dpkg-shlibdeps: warning: 20 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_Type: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyErr_SetString: it's probably a plugin dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 18 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyList_Type: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyErr_SetString: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyDict_Type: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyErr_SetString: it's probably a plugin dpkg-shlibdeps: warning: 20 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyObject_GetIter: it's probably a plugin dpkg-shlibdeps: warning: 33 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 2 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyErr_Clear: it's probably a plugin dpkg-shlibdeps: warning: 21 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyErr_SetString: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyErr_Clear: it's probably a plugin dpkg-shlibdeps: warning: 21 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 11 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyObject_IsInstance: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 25 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_Type: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyObject_IsInstance: it's probably a plugin dpkg-shlibdeps: warning: 15 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_FromStringAndSize: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyErr_SetString: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyIter_Next: it's probably a plugin dpkg-shlibdeps: warning: 30 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyObject_GetIter: it's probably a plugin dpkg-shlibdeps: warning: 30 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyList_Type: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_FromStringAndSize: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 28 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 11 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 21 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyComplex_FromDoubles: it's probably a plugin dpkg-shlibdeps: warning: 28 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyTuple_Type: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyTuple_Type: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyBytes_AsString: it's probably a plugin dpkg-shlibdeps: warning: 23 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyExc_IndexError: it's probably a plugin dpkg-shlibdeps: warning: 24 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyObject_CallFunction: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_Type: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyList_Type: it's probably a plugin dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyExc_IndexError: it's probably a plugin dpkg-shlibdeps: warning: 31 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-312-s390x-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 17 other similar warnings have been skipped (use -v to see them all) dh_installdeb -a -O--buildsystem=pybuild install -m0755 -d debian/libcctbx0/DEBIAN install -p -m0644 debian/.debhelper/generated/libcctbx0/triggers debian/libcctbx0/DEBIAN/triggers install -m0755 -d debian/libcctbx-dev/DEBIAN install -m0755 -d debian/python3-cctbx/DEBIAN printf '#!/bin/sh\nset -e\n' > debian/python3-cctbx/DEBIAN/postinst cat debian/python3-cctbx.postinst.debhelper >> debian/python3-cctbx/DEBIAN/postinst chmod 0755 -- debian/python3-cctbx/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python3-cctbx/DEBIAN/prerm cat debian/python3-cctbx.prerm.debhelper >> debian/python3-cctbx/DEBIAN/prerm chmod 0755 -- debian/python3-cctbx/DEBIAN/prerm install -p -m0644 debian/.debhelper/generated/python3-cctbx/triggers debian/python3-cctbx/DEBIAN/triggers dh_numpy3 -a -O--buildsystem=pybuild mv debian/libcctbx0.substvars.new debian/libcctbx0.substvars mv debian/libcctbx-dev.substvars.new debian/libcctbx-dev.substvars mv debian/python3-cctbx.substvars.new debian/python3-cctbx.substvars dh_gencontrol -a -O--buildsystem=pybuild install -m0755 -d debian/libcctbx-dev/DEBIAN echo misc:Depends= >> debian/libcctbx-dev.substvars echo misc:Pre-Depends= >> debian/libcctbx-dev.substvars dpkg-gencontrol -plibcctbx-dev -ldebian/changelog -Tdebian/libcctbx-dev.substvars -Pdebian/libcctbx-dev install -m0755 -d debian/libcctbx0/DEBIAN echo misc:Depends= >> debian/libcctbx0.substvars echo misc:Pre-Depends= >> debian/libcctbx0.substvars install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/DEBIAN dpkg-gencontrol -plibcctbx0 -ldebian/changelog -Tdebian/libcctbx0.substvars -Pdebian/.debhelper/libcctbx0/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=libcctbx0-dbgsym "-DDepends=libcctbx0 (= \${binary:Version})" "-DDescription=debug symbols for libcctbx0" "-DBuild-Ids=072dc9711be5a72a2ae97df1e83fe900ce815a89 08a6c5f0ddf0834a6ff427860a0a370a8c862a59 16306f708a983c29407380995e1f446b844d969f 1985c6b98fd265caf946cbf5ab73b832f0840859 1f56b5634d33fc1f557d7356c85c8038cadea040 2b18f02ff6aabf6df095a2af0a94536470e8d062 303deb192d57fc582a1d79519be1dca70576bb88 38e090133c37bcd30c79a927e7c1d8e61aee329e 4e0f4e18403feaef7b04715c18aaf1c37949a517 545f480e7baae76ef717bba07d6c41d9ff6f78fa 5bff63f48f9748582a519790202c5a8025c80f52 601b042dd7798e5885b815f4be417f61b93bac2c 61b62d9fd00b935dfe590363dbd3792c256500c7 7fcdade7c8a78619acc1d3d3faf847024bf7ca23 8f307487ed769ac55d642c87e3eb8128de220ee4 91da95c45995404ea4f2549db7a0fc4b539b059b a8acb2329a928dbe5d9212a584da875d70f14393 b71ede0000ed5fea944e9f7ade6e6d9ca103cb59 fc3362e3a66234f5a85a5e37fecd724da5e28415" -DSection=debug -DPackage-Type=ddeb -UMulti-Arch -UReplaces -UBreaks install -m0755 -d debian/python3-cctbx/DEBIAN echo misc:Depends= >> debian/python3-cctbx.substvars echo misc:Pre-Depends= >> debian/python3-cctbx.substvars install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/DEBIAN dpkg-gencontrol -ppython3-cctbx -ldebian/changelog -Tdebian/python3-cctbx.substvars -Pdebian/.debhelper/python3-cctbx/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=python3-cctbx-dbgsym "-DDepends=python3-cctbx (= \${binary:Version})" "-DDescription=debug symbols for python3-cctbx" "-DBuild-Ids=008377dffc48dadb3a58a7b401c83b0a88c8e6cc 00b70c2dff9d645db477283c5212cdf97eb39278 018872810dc0948399ce1676c796c86b32e12af9 03dba96230ea546129f44c76d77758013454fad6 06513501c3ce3ab0643f474d4bfcba6ae07ac720 068e642e4bc43e6eae834df30adc86659cccbf5a 0788bbbb5f92fbcf601084b7e82351ad8c7fe0d6 084c67a195f2034629c6e34679f82e2640a5dda2 09a1ab6f488d9c1c716ad76d14a3429c01e9b239 0a149c93660ee71dc7ef04f04710e5b4e6002959 0a3934a385da1363bbb654c1e847f4554f79dad7 0aef2f937977c30a32e472e0c8b1b821d6effacb 0d3a34b041d70939afd990d4be3181fb8950d350 0f55e558bd69d1f0f9e317253d91cab860aca53f 12fbf1ee59659cd40971c138308f0d48f8ece453 15633230495c99482b2738d715ae8c547aee5ca0 15f0948618f6c7c0358eeb4003bd2dc3f4f8c842 168ee15d920c27e138079d01a4b10afbcd5799a6 191ba0f7131e6eb3e674f584f17451b2c7b9378e 1cc650ca6c972d0a8c476ed0787eaf1a5d006a7a 1d52c01e0ec89568b8cf8be305c0c46ac1eaa261 1fd02992ffca5d858fb71ef0ba763036e5ccb0da 205068207808f8217a1810d8166c470f30144072 20d6a828a4aaa28182f4927ce8cf6430c2acc4bb 21cfc925120e9a1c2d3a864ef139897d8e763e18 233299a289ab5a91c1b0f6f1cc80e32d57db9547 27711048ec329924a2d643cec207b44c7f19dc24 28cb3b500d6564cc649550870089554700cc8f44 2a01c3b688726c0c5036dec0ad6a2b842b12cecf 2a042a4a5414fdb3b79106bc534ff34b16066b71 2b2a4768c0a6c379c40a7533889e4d4956da4c41 2c8a8cdc82489f6d0dee79e4b7a41a4b3860e94e 30c09a36006e6eb66cc829615b0d866aeb0fa262 30f5eae84ddacc9e0dc5c3b264c14b25a0506421 35371ffe95a389db4d6c94478c39208f96b8f506 362f00e089460f88a9e7dc59b7be886d01a01d15 379c36df427301bf13951c62a3efb9e190b97b1a 390b3d0a54a5afdb0f3b8c090d8726c57d4ebf2d 39f1f2eafa3baf1b464d5f29b87070d62804aea7 3be2da75a580b9b62b01957681924a36c1f21564 3ce4236e6aff53466eb38447a4f37fe03a256477 3cf20967b76e846f5862979866c3404630f25ea3 3fcd2dffc62a94a7809ee623c6fe3f327a4e41d8 4108be605ce1696ad8c935e51e32e0b4b71543e8 417a0101862a6f36c29d49f21674c82885fc3dd6 41fa4421da78add377ce80d2178e4e05d3b404a6 468d24b08c1c9e7fe37f0083b8d3a03093a874bc 46dc9233f1fe87c291f2054513c906ca33208747 479246a3032ababc5ab4a72b3023ed5acff9a264 4796303c8600d58aca8ebed018ce5ad49ae498dc 4a6ac0c883b2798c46bbe8a4d78e2f92909c562a 4b2ad3188f4428c46311b6ec8e45d7326cfaf94a 4c99def49fd79eb7e14b4df79041a8cca5cfcc8e 4ed5667ae9184df204f3523185d883b0e2427367 515f922300b63854b1204fe84e618dd459a176a3 53748c6291678d8efbf01f7dfc76ec9324419431 546a051e2b01d9a5da38ad2e730f23c214ebac36 54b554fc2848397924618a150d33b91f5ab9940e 555b44292a91d9d6894cff1e3eb310a72dd322f1 5614c312dbdb9a936a1975e27c9e3487548fad72 567538b2b7218955bddafbb98acd1b9f47294733 5715bbda223dc87e70e0cdb36f16ca306942a543 578c8e6c8313fe40be9efb78c1c4dbcdceafe982 57a366266d165436b20d3da485dc96aaa37c218e 57c0f241c42350051f0b73dc02ea0986130eddf6 589aa154fd831aaacb1c8c803ab00266f6e622d8 5b07d4474c9f051ab6e49b5f3a63e5ec4805c5f8 5c00eddc2101cdd9ad1f3d39ba1cb10f607c8657 5c1f3407640867bc77a2326f93d0469c40316931 5d6e335b17bde18cfb56b00a6bf83d247a75e7ba 5d73d549d9ff54bec4b46319d072822d006a5cd1 5e9bd70501736439f5b2554a1bcc4bc139eab1b2 5f40c5371f824d53964713366be64362b81b68de 5faa12a92b92108e3170f70933aef6f1ca9132fc 608420a9a9b38e9dd230caa37f91c45b818181e5 614213ea07841af454ecd6fe21c97d31515ee6cb 61579081b7ac34fba26694d7e5d5d7b5808eefb2 61c4dc1ec8248ac5871386177b41390d3357d05c 62217532e4dea70f329a11740078b7278dfdfae7 64e9304af4cf3c142a846b517210322be9355813 650caaf845570c71e1a8ebef629cc6c0327ac57a 67815a3638b69d1b7f2e9d7b51c1b936c4e15bbc 691e86bc566caedb86c77485f8e24c77cac37b17 6981b84e210599312e265f676ca7e1b0c3292a58 6c8719d9fa12f39a41a59a91b520c10d814dcde6 6cbbd4758caa4330edbf75ceaa680c8469318693 6def5ca01a22ab82b8b8eaac0b7621098ac24286 711d52d853d225c3038e255cc14e4e3788eee811 7298e89ab2bf41e6e1cf0937a1354d698a3b2c44 74517e38ad059fcd06b92eba599f9e3a5782e38d 7524965092b49fc6198c5948320d0be191647d31 75a6409e6c62e74a5cf2a6484fab4fb96a5bb7ab 76a19ac6bce7db9f5f5f5a81d33651034e58a3b1 76c8b1c0cca290dddbd698670f6daa1843530dc4 7871127c2e78b4b9bb5812a63a9c613192afad9b 78ead43188b23ab20585882b01a6407a35695c26 79a2a06a5307daa98645380b752f5558a6c4a6c8 7c0c48cc7761b45cb0f1dc30733a8deafff3534f 7ecb3c55bc8067af32e153e18ede530a02694198 82a18261f3291f9162dabfa3fcdd26ffdffdeb36 82a490022cbe19de4e99b173f52ef9ad0a2e4c32 840027f81fbce4c9a90e810205b384c48120bcb9 859b7c9aa176b53730683c9e8c5dc0cef1196edd 85c2b8a11527d81c260f9b010f93780834d77890 8675deafe78fe99a3bb9e0ec5e7a2b5a257eaab7 8873707c4740c5aa9b919c20ba750c7cae376923 899beb86346c5434c16067ff90f469832d76862a 8c2fa9ce10f063ee265f4b93577d8a7f3aab8b5b 8d820bc56381d3b12fe5c6f15c2dd778078dc45f 8e59a33f30f13de69de4658d36851daa0866519b 8f1937af4818273b65b3c43b1833e650e568da21 8f76cc385ea5dca95d05a064bfb31ce24b040512 90c06533d9a5a72622c142316dd652b10045f1a9 91212ca9e50d696fef07495bd8b79f79bc93b978 954e1d3ec32fc8106db2ceb495fa5d3d3f5e0e44 95b3425d4f2fad33879a1a69a0db74d080ea27eb 96f4e630ee17f84c44c417d6f5feb0ad6fb10a98 99cf5604414aa176e70ae780afa0cab1718eb42e 9a72153332e94f60e36b849485e657dbd3e40cb1 9a76b69e1f796542f86e2cbce2c35f25c7f0455e 9a7ad33697736a78a6ce08084ae44a196d114e26 9ac6b692e3f720f0b1d0ab0db85f1f297d565903 9c0f5fd17bec5f316a1db028a2a27448b8582e94 9ce39756c89a0053828fbd828e65b47e677ed608 9e16d40e572b0497af91f346749f1bd6532de80f a05fbc09aa9c7ec320b3631636c269b27d7a4d55 a1e84863f95b18fe15c4bbf10d889cd782cbeb70 a48016841d72ec305536d72d8f911577cef7913c a49b6145932e543566a471fb79d0fd91ff4ce403 a6a29ba145b2c0a2a1ef1c6534e19e86895bbf53 a72b79247a8274fb5ec306456ae6fe4f23f5aff0 a78b250c3d9f99aa7cd9aba3e65096c0ecf83311 ab4a11b0698bee9df944416cc8cc8d047676c251 ab99feb35eae193adbb4fa046e24393cba7df5de aca741c1aabe9edc540e5d1645e0170f12c11934 acfce12df9f331b458d4b793435be2e780a9c47d b159db18e1ba969e104f216251a37b1a951b7dc6 b28f557b770b79caa7019cfd32f5a04e87cfbc30 b2a66ead7802a5b67db7cab1c04a16c82cecd95c b305143cc735c378b5f19f527dc21a25a5dc461f b3398c7b1a24dd6a6c6af80e979f07b39299cd99 b4048c96b496b9cd242420171debccb08769e974 b51275b0b509d621d1000aaa739d77fde0a28d24 b643a75d49ba6fa8f8020e29dc79cc1f6531d7e6 b6f09901478bcce06cd676cd3a83e01cb80dbb51 b7c4819a7bc2db8f40a762f77614de95735162c6 b7e1975bfc6956d15c695682d61b455ca1456eb9 b8933b1dbf994b072ca07e42bcd82b3538d293fb bb4ee375f991d9deac27eebf2951f135dbdf78eb bc294b2828de7ff5a441671a272e0099f643e03a bc7fee383c190acb75b51380953e0eeeb50c4a4c be0ef651f7cc093665be540c4e4d1f81f2a3ebaf be1d524a7f1e45e5c0bc09f760dce5edcc3dea2e be91ba7c31f3ac7e9cd30b9587f9a15d221673bf c2ddefdf8946c2a70db0ab4f21757e1db9194fba c3024eb844267dcd52a8b34cb65a3e2286d2b315 c7140d12d7edf34da957aad282690ce62a92c924 c76f12208c8dffb5b7ddfb2bdfebcbe58190fbc2 cb43fc3982c766a9258f84bf55c3194cc098f900 d07349f77fe3e98a17bea77c20800b3dfe71eb6b d19cdc788a955b53d355e021efb4d4bf5f1815c7 d1e8708a2cc5754e245b5d2efb8d6e4813d4114b d27f3e399ea97e650893bacc94caed4eb48e50ae d285cce4771fd581e31a2dd081ab12d28e903ae5 d4b6067cdb575ad75b8fe91adcaea94e02eb04cb d4ffcad5f4fc82ee3f5d39684d6c10f7f00fb890 d54af92cce931f92685b581e63e7806ef7e74f29 d7a8f8ce7570d34265c19eeb0fa755037d3dcf07 db9b836e24fc10eba22240ce0c8cee8e9fbbe84e dbfed91faf7afc62426cc96a51751ce4b55ad02e dcae88799ecaf4fc8df11c00de2c11d0b235fee9 dfbae16ae014cd229b4739449cb13bf15c8fd78f e39076063c78f0fa4a25ae005bee9cb5e33eff69 e41cd0018f27dd2b06b75b02ce28658377fc4552 e5075f90d8f9906b7e16e9509a90652059ed425d e72e8bf8f757cc32aab9dc15ae55606c5cfa12d4 e731faddb085475aba91a046752f100790cd1042 e87124a3057fd18c5751d11c54d09af20b57c553 eb31ebf70675ae6de3e29a267f115990aaadc7de ec058490aede004b97864e0adc7e479ab256c072 ed1974c7c4702aa7e1e3d6f1b1b163cbb8acd74b eeb9b9a672741f32cd05451bda6471948ceaabd1 eed1c727db1a63473cc3d78333937a39a777c15c effe9f741711b8d06744d92685a28cf6b21feaf2 f0139a386fd7655e7a07679e67868bd45782c2f0 f0c43a30d881b08f0804b8594bb4ac995d570787 f19138e63173ae96a11b65c8e76903b3ef03e3a0 f2421615c0787db16a0d5c8b2206f06221ec3612 f288369340920ecaf34790ec7a33883705b749a6 f3ac18a11fe7eafc6a438272b5c7510c3e0a1a45 f49353ae470a38a0f04a3f77e78cce34fa1552ff f5e4236f321fc4516c58ab035c607c274c506eb4 f6405600e29074723489adba481fe5187d170978 f7757346ff8f75cdea640b824a206ec4977eb8b2 f8e7279909e1ae8cdfa613be10db6f78170d137f f96466eae1930f1bcfb15d8836d26f5564aff8f0 fa23d8bb07cfbf39f6fba2eb9e2d2cae7768adfc fa714fe9bd2e1313c36dffced27a9af61e3cc1f6 fa8162761591b566d185e94a288fce13b1259e30 faf190f919767571eac42ae6c30c52f4d3d2730a fc7c4d60d34c0261b950b345a81a84b131e2bd7d fdceec76a57b9a3365a216e3347d49bbe690fab9 fff95570bc3f7e5bf913c6304b0f0744c91c384e" -DSection=debug -DPackage-Type=ddeb -UMulti-Arch -UReplaces -UBreaks dpkg-gencontrol: warning: package libcctbx0: substitution variable ${python3:Depends} unused, but is defined chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/DEBIAN/control dpkg-gencontrol -plibcctbx0 -ldebian/changelog -Tdebian/libcctbx0.substvars -Pdebian/libcctbx0 dpkg-gencontrol: warning: package libcctbx-dev: substitution variable ${python3:Depends} unused, but is defined chmod 0644 -- debian/libcctbx-dev/DEBIAN/control chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/DEBIAN/control dpkg-gencontrol -ppython3-cctbx -ldebian/changelog -Tdebian/python3-cctbx.substvars -Pdebian/python3-cctbx dpkg-gencontrol: warning: package libcctbx0: substitution variable ${python3:Depends} unused, but is defined chmod 0644 -- debian/libcctbx0/DEBIAN/control chmod 0644 -- debian/python3-cctbx/DEBIAN/control dh_md5sums -a -O--buildsystem=pybuild install -m0755 -d debian/libcctbx0/DEBIAN install -m0755 -d debian/libcctbx-dev/DEBIAN install -m0755 -d debian/python3-cctbx/DEBIAN cd debian/libcctbx0 >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/libcctbx-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/python3-cctbx >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libcctbx0/DEBIAN/md5sums install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/DEBIAN cd debian/.debhelper/libcctbx0/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libcctbx-dev/DEBIAN/md5sums chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/DEBIAN/md5sums chmod 0644 -- debian/python3-cctbx/DEBIAN/md5sums install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/DEBIAN cd debian/.debhelper/python3-cctbx/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/DEBIAN/md5sums dh_builddeb -a -O--buildsystem=pybuild dpkg-deb --root-owner-group --build debian/libcctbx0 .. dpkg-deb --root-owner-group --build debian/libcctbx-dev .. dpkg-deb --root-owner-group --build debian/.debhelper/python3-cctbx/dbgsym-root debian/.debhelper/scratch-space/build-python3-cctbx INFO: pkgstriptranslations version 154 INFO: pkgstriptranslations version 154 INFO: pkgstriptranslations version 154 pkgstriptranslations: processing libcctbx0 (in debian/libcctbx0); do_strip: , oemstrip: pkgstriptranslations: processing libcctbx-dev (in debian/libcctbx-dev); do_strip: , oemstrip: pkgstriptranslations: processing python3-cctbx-dbgsym (in debian/.debhelper/python3-cctbx/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgstripfiles: processing control file: debian/libcctbx-dev/DEBIAN/control, package libcctbx-dev, directory debian/libcctbx-dev INFO: pkgstripfiles: waiting for lock (libcctbx-dev) ... INFO: pkgstripfiles: waiting for lock (libcctbx-dev) ... INFO: pkgstripfiles: waiting for lock (libcctbx-dev) ... INFO: pkgstripfiles: waiting for lock (libcctbx-dev) ... INFO: pkgstripfiles: waiting for lock (libcctbx-dev) ... pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgstripfiles: processing control file: debian/.debhelper/python3-cctbx/dbgsym-root/DEBIAN/control, package python3-cctbx-dbgsym, directory debian/.debhelper/python3-cctbx/dbgsym-root dpkg-deb: building package 'python3-cctbx-dbgsym' in 'debian/.debhelper/scratch-space/build-python3-cctbx/python3-cctbx-dbgsym_2023.12+ds2+~3.17.0+ds1-4build2_s390x.deb'. INFO: pkgstripfiles: waiting for lock (libcctbx-dev) ... INFO: pkgstripfiles: waiting for lock (libcctbx-dev) ... INFO: pkgstripfiles: waiting for lock (libcctbx-dev) ... INFO: pkgstripfiles: waiting for lock (libcctbx-dev) ... INFO: pkgstripfiles: waiting for lock (libcctbx-dev) ... INFO: pkgstripfiles: waiting for lock (libcctbx-dev) ... INFO: pkgstripfiles: waiting for lock (libcctbx-dev) ... INFO: pkgstripfiles: waiting for lock (libcctbx-dev) ... INFO: pkgstripfiles: waiting for lock (libcctbx-dev) ... INFO: pkgstripfiles: waiting for lock (libcctbx-dev) ... INFO: pkgstripfiles: waiting for lock (libcctbx-dev) ... pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgstripfiles: processing control file: debian/libcctbx0/DEBIAN/control, package libcctbx0, directory debian/libcctbx0 pkgstripfiles: Truncating usr/share/doc/libcctbx0/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package libcctbx0 ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libcctbx0' in '../libcctbx0_2023.12+ds2+~3.17.0+ds1-4build2_s390x.deb'. Searching for duplicated docs in dependency libcctbx0... symlinking changelog.Debian.gz in libcctbx-dev to file in libcctbx0 pkgstripfiles: Running PNG optimization (using 4 cpus) for package libcctbx-dev ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libcctbx-dev' in '../libcctbx-dev_2023.12+ds2+~3.17.0+ds1-4build2_s390x.deb'. dpkg-deb --root-owner-group --build debian/.debhelper/libcctbx0/dbgsym-root debian/.debhelper/scratch-space/build-libcctbx0 INFO: pkgstriptranslations version 154 dpkg-deb --root-owner-group --build debian/python3-cctbx .. pkgstriptranslations: processing libcctbx0-dbgsym (in debian/.debhelper/libcctbx0/dbgsym-root); do_strip: , oemstrip: INFO: pkgstriptranslations version 154 pkgstriptranslations: processing python3-cctbx (in debian/python3-cctbx); do_strip: , oemstrip: pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgstripfiles: processing control file: debian/.debhelper/libcctbx0/dbgsym-root/DEBIAN/control, package libcctbx0-dbgsym, directory debian/.debhelper/libcctbx0/dbgsym-root dpkg-deb: building package 'libcctbx0-dbgsym' in 'debian/.debhelper/scratch-space/build-libcctbx0/libcctbx0-dbgsym_2023.12+ds2+~3.17.0+ds1-4build2_s390x.deb'. pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgstripfiles: processing control file: debian/python3-cctbx/DEBIAN/control, package python3-cctbx, directory debian/python3-cctbx Searching for duplicated docs in dependency libcctbx-dev... symlinking changelog.Debian.gz in python3-cctbx to file in libcctbx0 Searching for duplicated docs in dependency libcctbx0... pkgstripfiles: Running PNG optimization (using 4 cpus) for package python3-cctbx ... xargs: warning: options --max-lines and --replace/-I/-i are mutually exclusive, ignoring previous --max-lines value WARNING: optipng failed on usr/bin/labelit.png, ignoring Invalid PNG signature on usr/bin/labelit.png [at void throw_png_error():pngex.h:37] WARNING: advpng failed on usr/bin/labelit.png, ignoring . pkgstripfiles: PNG optimization (0/0) for package python3-cctbx took 1 s dpkg-deb: building package 'python3-cctbx' in '../python3-cctbx_2023.12+ds2+~3.17.0+ds1-4build2_s390x.deb'. Renaming libcctbx0-dbgsym_2023.12+ds2+~3.17.0+ds1-4build2_s390x.deb to libcctbx0-dbgsym_2023.12+ds2+~3.17.0+ds1-4build2_s390x.ddeb mv debian/.debhelper/scratch-space/build-libcctbx0/libcctbx0-dbgsym_2023.12\+ds2\+\~3.17.0\+ds1-4build2_s390x.deb ../libcctbx0-dbgsym_2023.12\+ds2\+\~3.17.0\+ds1-4build2_s390x.ddeb Renaming python3-cctbx-dbgsym_2023.12+ds2+~3.17.0+ds1-4build2_s390x.deb to python3-cctbx-dbgsym_2023.12+ds2+~3.17.0+ds1-4build2_s390x.ddeb mv debian/.debhelper/scratch-space/build-python3-cctbx/python3-cctbx-dbgsym_2023.12\+ds2\+\~3.17.0\+ds1-4build2_s390x.deb ../python3-cctbx-dbgsym_2023.12\+ds2\+\~3.17.0\+ds1-4build2_s390x.ddeb dpkg-genbuildinfo --build=any -O../cctbx_2023.12+ds2+~3.17.0+ds1-4build2_s390x.buildinfo dpkg-genchanges --build=any -mLaunchpad Build Daemon -O../cctbx_2023.12+ds2+~3.17.0+ds1-4build2_s390x.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2024-04-01T03:59:52Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ cctbx_2023.12+ds2+~3.17.0+ds1-4build2_s390x.changes: ---------------------------------------------------- Format: 1.8 Date: Sun, 31 Mar 2024 17:46:45 +0000 Source: cctbx Binary: libcctbx-dev libcctbx0 python3-cctbx Built-For-Profiles: noudeb Architecture: s390x Version: 2023.12+ds2+~3.17.0+ds1-4build2 Distribution: noble-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Steve Langasek Description: libcctbx-dev - Computational Crystallography Toolbox - headers libcctbx0 - Computational Crystallography Toolbox - runtime libraries python3-cctbx - Python Toolbox for crystallography Changes: 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6d9d78ad7783998a0f59b102e34b1bcb8316c288e0a910515cebb60a2ffbd541 1191642 libcctbx-dev_2023.12+ds2+~3.17.0+ds1-4build2_s390x.deb 7f7c2b0ba39d88ee7e346eab92cf125b810657ed7213a6314844f8350ab69854 8671122 libcctbx0-dbgsym_2023.12+ds2+~3.17.0+ds1-4build2_s390x.ddeb 17095553e1568f3ca1e9b3e551138c763e44b3afe65cae9c8ed1dce768a55938 2025022 libcctbx0_2023.12+ds2+~3.17.0+ds1-4build2_s390x.deb eb8fc0e402db671db384df861a25c86f9b199ef598b418c0eefe661f9f9a0b60 118115816 python3-cctbx-dbgsym_2023.12+ds2+~3.17.0+ds1-4build2_s390x.ddeb c0ea96f6697a777600dc2044c807e174e22f89a6a21ea15e0a9cd55ea470fe7e 27213488 python3-cctbx_2023.12+ds2+~3.17.0+ds1-4build2_s390x.deb Build-Origin: Ubuntu Build-Architecture: s390x Build-Date: Mon, 01 Apr 2024 03:59:50 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs usr-local-has-programs Installed-Build-Depends: adduser (= 3.137ubuntu1), adwaita-icon-theme (= 46.0-1), at-spi2-common (= 2.52.0-1), autoconf (= 2.71-3), automake (= 1:1.16.5-1.3ubuntu1), autopoint (= 0.21-14ubuntu1), autotools-dev (= 20220109.1), base-files (= 13ubuntu9), base-passwd (= 3.6.3), bash (= 5.2.21-2ubuntu4), binutils (= 2.42-4ubuntu2), binutils-common (= 2.42-4ubuntu2), binutils-s390x-linux-gnu (= 2.42-4ubuntu2), blt (= 2.5.3+dfsg-7), bsdextrautils (= 2.39.3-9ubuntu3), bsdutils (= 1:2.39.3-9ubuntu3), build-essential (= 12.10ubuntu1), bzip2 (= 1.0.8-5.1), ca-certificates (= 20240203), coreutils (= 9.4-3ubuntu5), cpp (= 4:13.2.0-7ubuntu1), cpp-13 (= 13.2.0-23ubuntu3), cpp-13-s390x-linux-gnu (= 13.2.0-23ubuntu3), cpp-s390x-linux-gnu (= 4:13.2.0-7ubuntu1), dash (= 0.5.12-6ubuntu5), dbus (= 1.14.10-4ubuntu3), dbus-bin (= 1.14.10-4ubuntu3), dbus-daemon (= 1.14.10-4ubuntu3), dbus-session-bus-common (= 1.14.10-4ubuntu3), dbus-system-bus-common (= 1.14.10-4ubuntu3), dbus-user-session (= 1.14.10-4ubuntu3), dconf-gsettings-backend (= 0.40.0-4build2), dconf-service (= 0.40.0-4build2), debconf (= 1.5.86), debhelper (= 13.14.1ubuntu5), debianutils (= 5.17build1), debugedit (= 1:5.0-5build1), dh-autoreconf (= 20), dh-exec (= 0.29), dh-python (= 6.20231223ubuntu2), dh-strip-nondeterminism (= 1.13.1-1), diffutils (= 1:3.10-1), dpkg (= 1.22.6ubuntu6), dpkg-dev (= 1.22.6ubuntu6), dwz (= 0.15-1build5), fftw-dev (= 2.1.5-6build2), fftw2 (= 2.1.5-6build2), file (= 1:5.45-3build1), findutils (= 4.9.0-5), fontconfig (= 2.15.0-1.1ubuntu2), fontconfig-config (= 2.15.0-1.1ubuntu2), fonts-dejavu-core (= 2.37-8), fonts-dejavu-mono (= 2.37-8), fonts-font-awesome (= 5.0.10+really4.7.0~dfsg-4.1), fonts-lato (= 2.015-1), fonts-lyx (= 2.4.0~RC3-1build3), fonts-urw-base35 (= 20200910-8), g++ (= 4:13.2.0-7ubuntu1), g++-13 (= 13.2.0-23ubuntu3), g++-13-s390x-linux-gnu (= 13.2.0-23ubuntu3), g++-s390x-linux-gnu (= 4:13.2.0-7ubuntu1), gcc (= 4:13.2.0-7ubuntu1), gcc-13 (= 13.2.0-23ubuntu3), gcc-13-base (= 13.2.0-23ubuntu3), gcc-13-s390x-linux-gnu (= 13.2.0-23ubuntu3), gcc-14-base (= 14-20240330-1ubuntu2), gcc-s390x-linux-gnu (= 4:13.2.0-7ubuntu1), gettext (= 0.21-14ubuntu1), gettext-base (= 0.21-14ubuntu1), grep (= 3.11-4), groff-base (= 1.23.0-3build2), gtk-update-icon-cache (= 3.24.41-1.1ubuntu4), gzip (= 1.12-1ubuntu2), hdf5-helpers (= 1.10.10+repack-3.1ubuntu4), hicolor-icon-theme (= 0.17-2), hostname (= 3.23+nmu2ubuntu1), humanity-icon-theme (= 0.6.16), ibverbs-providers (= 50.0-2build1), init-system-helpers (= 1.66ubuntu1), intltool-debian (= 0.35.0+20060710.6), jq (= 1.7.1-3build1), libacl1 (= 2.3.2-1), libaec-dev (= 1.1.2-1), libaec0 (= 1.1.2-1), libann-cctbx-dev (= 1.1.2+doc-9), libann-cctbx0 (= 1.1.2+doc-9), libantlr3c-3.4-0 (= 3.4+dfsg-4build1), libantlr3c-dev (= 3.4+dfsg-4build1), libapparmor1 (= 4.0.0-beta3-0ubuntu3), libarchive-zip-perl (= 1.68-1), libargon2-1 (= 0~20190702+dfsg-4), libasan8 (= 14-20240330-1ubuntu2), libatk-bridge2.0-0t64 (= 2.52.0-1), libatk1.0-0t64 (= 2.52.0-1), libatomic1 (= 14-20240330-1ubuntu2), libatspi2.0-0t64 (= 2.52.0-1), libattr1 (= 1:2.5.2-1), libaudit-common (= 1:3.1.2-2.1build1), libaudit1 (= 1:3.1.2-2.1build1), libavahi-client3 (= 0.8-13ubuntu5), libavahi-common-data (= 0.8-13ubuntu5), libavahi-common3 (= 0.8-13ubuntu5), libbinutils (= 2.42-4ubuntu2), libblas3 (= 3.12.0-3), libblkid1 (= 2.39.3-9ubuntu3), libboost-atomic1.83-dev (= 1.83.0-2.1ubuntu2), libboost-atomic1.83.0 (= 1.83.0-2.1ubuntu2), libboost-chrono1.83-dev (= 1.83.0-2.1ubuntu2), libboost-chrono1.83.0t64 (= 1.83.0-2.1ubuntu2), libboost-date-time1.83-dev (= 1.83.0-2.1ubuntu2), libboost-date-time1.83.0 (= 1.83.0-2.1ubuntu2), libboost-dev (= 1.83.0.1ubuntu2), libboost-numpy-dev (= 1.83.0.1ubuntu2), libboost-numpy1.83-dev (= 1.83.0-2.1ubuntu2), libboost-numpy1.83.0 (= 1.83.0-2.1ubuntu2), libboost-python-dev (= 1.83.0.1ubuntu2), libboost-python1.83-dev (= 1.83.0-2.1ubuntu2), libboost-python1.83.0 (= 1.83.0-2.1ubuntu2), libboost-serialization1.83-dev (= 1.83.0-2.1ubuntu2), libboost-serialization1.83.0 (= 1.83.0-2.1ubuntu2), libboost-system1.83-dev (= 1.83.0-2.1ubuntu2), libboost-system1.83.0 (= 1.83.0-2.1ubuntu2), libboost-thread-dev (= 1.83.0.1ubuntu2), libboost-thread1.83-dev (= 1.83.0-2.1ubuntu2), libboost-thread1.83.0 (= 1.83.0-2.1ubuntu2), libboost1.83-dev (= 1.83.0-2.1ubuntu2), libbrotli1 (= 1.1.0-2build1), libbsd0 (= 0.12.1-1build1), libbz2-1.0 (= 1.0.8-5.1), libc-bin (= 2.39-0ubuntu8), libc-dev-bin (= 2.39-0ubuntu8), libc6 (= 2.39-0ubuntu8), libc6-dev (= 2.39-0ubuntu8), libcairo-gobject2 (= 1.18.0-3), libcairo2 (= 1.18.0-3), libcap-ng0 (= 0.8.4-2build2), libcap2 (= 1:2.66-5ubuntu1), libcbf-dev (= 0.9.7+dfsg1-3.1build2), libcbf1t64 (= 0.9.7+dfsg1-3.1build2), libcc1-0 (= 14-20240330-1ubuntu2), libccp4-data (= 8.0.0-2), libccp4-dev (= 8.0.0-2), libccp4c0 (= 8.0.0-2), libccp4f0 (= 8.0.0-2), libclipper-dev (= 2.1.20201109-2), libclipper2 (= 2.1.20201109-2), libcolord2 (= 1.4.7-1build2), libcom-err2 (= 1.47.0-2.4~exp1ubuntu3), libcrypt-dev (= 1:4.4.36-4), libcrypt1 (= 1:4.4.36-4), libcryptsetup12 (= 2:2.7.0-1ubuntu3), libctf-nobfd0 (= 2.42-4ubuntu2), libctf0 (= 2.42-4ubuntu2), libcups2t64 (= 2.4.7-1.2ubuntu3), libcurl3-gnutls (= 8.5.0-2ubuntu2), libcurl4-openssl-dev (= 8.5.0-2ubuntu9), libcurl4t64 (= 8.5.0-2ubuntu9), libdatrie1 (= 0.2.13-3), libdb5.3t64 (= 5.3.28+dfsg2-6build1), libdbus-1-3 (= 1.14.10-4ubuntu3), libdconf1 (= 0.40.0-4build2), libdebconfclient0 (= 0.271ubuntu3), libdebhelper-perl (= 13.14.1ubuntu5), libdeflate-dev (= 1.19-1), libdeflate0 (= 1.19-1), libdevmapper1.02.1 (= 2:1.02.185-3ubuntu3), libdouble-conversion3 (= 3.3.0-1), libdpkg-perl (= 1.22.6ubuntu6), libdrm-amdgpu1 (= 2.4.120-2), libdrm-common (= 2.4.120-2), libdrm-nouveau2 (= 2.4.120-2), libdrm-radeon1 (= 2.4.120-2), libdrm2 (= 2.4.120-2), libdw1t64 (= 0.190-1.1build3), libedit2 (= 3.1-20230828-1), libegl-mesa0 (= 24.0.3-1ubuntu4), libegl1 (= 1.7.0-1), libeigen3-dev (= 3.4.0-4), libelf1t64 (= 0.190-1.1build3), libepoxy0 (= 1.5.10-1), libevdev2 (= 1.13.1+dfsg-1), libevent-core-2.1-7 (= 2.1.12-stable-9build1), libevent-pthreads-2.1-7 (= 2.1.12-stable-9build1), libexpat1 (= 2.6.1-2build1), libexpat1-dev (= 2.6.1-2build1), libfabric1 (= 1.17.0-3build1), libfdisk1 (= 2.39.3-9ubuntu3), libffi8 (= 3.4.6-1), libfftw3-bin (= 3.3.10-1ubuntu3), libfftw3-dev (= 3.3.10-1ubuntu3), libfftw3-double3 (= 3.3.10-1ubuntu3), libfftw3-long3 (= 3.3.10-1ubuntu3), libfftw3-single3 (= 3.3.10-1ubuntu3), libfile-stripnondeterminism-perl (= 1.13.1-1), libfontconfig1 (= 2.15.0-1.1ubuntu2), libfontenc1 (= 1:1.1.8-1build1), libfreetype6 (= 2.13.2+dfsg-1build3), libfribidi0 (= 1.0.13-3), libgbm1 (= 24.0.3-1ubuntu4), libgcc-13-dev (= 13.2.0-23ubuntu3), libgcc-s1 (= 14-20240330-1ubuntu2), libgcrypt20 (= 1.10.3-2), libgdbm-compat4t64 (= 1.23-5.1build1), libgdbm6t64 (= 1.23-5.1build1), libgdk-pixbuf-2.0-0 (= 2.42.10+dfsg-3ubuntu2), libgdk-pixbuf2.0-common (= 2.42.10+dfsg-3ubuntu2), libgfortran5 (= 14-20240330-1ubuntu2), libgl-dev (= 1.7.0-1), libgl1 (= 1.7.0-1), libgl1-mesa-dri (= 24.0.3-1ubuntu4), libglapi-mesa (= 24.0.3-1ubuntu4), libglew2.2 (= 2.2.0-4), libglib2.0-0t64 (= 2.80.0-6build1), libglu1-mesa (= 9.0.2-1.1), libglu1-mesa-dev (= 9.0.2-1.1), libglvnd0 (= 1.7.0-1), libglx-dev (= 1.7.0-1), libglx-mesa0 (= 24.0.3-1ubuntu4), libglx0 (= 1.7.0-1), libgmp10 (= 2:6.3.0+dfsg-2ubuntu4), libgnutls30t64 (= 3.8.3-1.1ubuntu3), libgomp1 (= 14-20240330-1ubuntu2), libgpg-error0 (= 1.47-3build1), libgraphite2-3 (= 1.3.14-2), libgssapi-krb5-2 (= 1.20.1-6ubuntu2), libgtk-3-0t64 (= 3.24.41-1.1ubuntu4), libgtk-3-common (= 3.24.41-1.1ubuntu4), libgudev-1.0-0 (= 1:238-5ubuntu1), libharfbuzz0b (= 8.3.0-2build2), libhdf5-103-1t64 (= 1.10.10+repack-3.1ubuntu4), libhdf5-cpp-103-1t64 (= 1.10.10+repack-3.1ubuntu4), libhdf5-dev (= 1.10.10+repack-3.1ubuntu4), libhdf5-fortran-102t64 (= 1.10.10+repack-3.1ubuntu4), libhdf5-hl-100t64 (= 1.10.10+repack-3.1ubuntu4), libhdf5-hl-cpp-100t64 (= 1.10.10+repack-3.1ubuntu4), libhdf5-hl-fortran-100t64 (= 1.10.10+repack-3.1ubuntu4), libhogweed6t64 (= 3.9.1-2.2build1), libhwloc-plugins (= 2.10.0-1), libhwloc15 (= 2.10.0-1), libibverbs1 (= 50.0-2build1), libice6 (= 2:1.0.10-1build2), libicu74 (= 74.2-1ubuntu1), libidn2-0 (= 2.3.7-2), libimagequant0 (= 2.18.0-1), libinput-bin (= 1.25.0-1ubuntu1), libinput10 (= 1.25.0-1ubuntu1), libisl23 (= 0.26-3), libitm1 (= 14-20240330-1ubuntu2), libjansson4 (= 2.14-2build2), libjbig-dev (= 2.1-6.1ubuntu1), libjbig0 (= 2.1-6.1ubuntu1), libjpeg-dev (= 8c-2ubuntu11), libjpeg-turbo8 (= 2.1.5-2ubuntu1), libjpeg-turbo8-dev (= 2.1.5-2ubuntu1), libjpeg8 (= 8c-2ubuntu11), libjpeg8-dev (= 8c-2ubuntu11), libjq1 (= 1.7.1-3build1), libjs-jquery (= 3.6.1+dfsg+~3.5.14-1), libjs-jquery-ui (= 1.13.2+dfsg-1), libjs-sphinxdoc (= 7.2.6-6), libjs-underscore (= 1.13.4~dfsg+~1.11.4-3), libjson-c5 (= 0.17-1), libk5crypto3 (= 1.20.1-6ubuntu2), libkeyutils1 (= 1.6.3-3), libkmod2 (= 31+20240202-2ubuntu5), libkrb5-3 (= 1.20.1-6ubuntu2), libkrb5support0 (= 1.20.1-6ubuntu2), liblapack3 (= 3.12.0-3), liblbfgsb0 (= 3.0+dfsg.4-1), liblcms2-2 (= 2.14-2), libldap2 (= 2.6.7+dfsg-1~exp1ubuntu7), libllvm17t64 (= 1:17.0.6-9build2), liblz4-1 (= 1.9.4-1), liblz4-dev (= 1.9.4-1), liblzf1 (= 3.6-4), liblzma-dev (= 5.6.1+really5.4.5-1build1), liblzma5 (= 5.6.1+really5.4.5-1build1), libmagic-mgc (= 1:5.45-3build1), libmagic1t64 (= 1:5.45-3build1), libmd0 (= 1.1.0-2), libmd4c0 (= 0.4.8-1), libmmdb2-0 (= 2.0.22-1), libmmdb2-dev (= 2.0.22-1), libmount1 (= 2.39.3-9ubuntu3), libmpc3 (= 1.3.1-1), libmpfr6 (= 4.2.1-1), libmtdev1t64 (= 1.1.6-1.1build1), libmunge2 (= 0.5.15-4), libncursesw6 (= 6.4+20240113-1ubuntu1), libnetcdf19 (= 1:4.9.2-3ubuntu1), libnettle8t64 (= 3.9.1-2.2build1), libnghttp2-14 (= 1.59.0-1build2), libnl-3-200 (= 3.7.0-0.3), libnl-route-3-200 (= 3.7.0-0.3), libnotify4 (= 0.8.3-1build2), libonig5 (= 6.9.9-1), libopengl-dev (= 1.7.0-1), libopengl0 (= 1.7.0-1), libopenjp2-7 (= 2.5.0-2build2), libopenmpi3t64 (= 4.1.6-7ubuntu1), libp11-kit0 (= 0.25.3-4ubuntu1), libpam-modules (= 1.5.3-5ubuntu4), libpam-modules-bin (= 1.5.3-5ubuntu4), libpam-runtime (= 1.5.3-5ubuntu4), libpam-systemd (= 255.4-1ubuntu5), libpam0g (= 1.5.3-5ubuntu4), libpango-1.0-0 (= 1.52.1+ds-1build1), libpangocairo-1.0-0 (= 1.52.1+ds-1build1), libpangoft2-1.0-0 (= 1.52.1+ds-1build1), libpciaccess0 (= 0.17-3), libpcre2-16-0 (= 10.42-4ubuntu1), libpcre2-32-0 (= 10.42-4ubuntu1), libpcre2-8-0 (= 10.42-4ubuntu1), libperl5.38t64 (= 5.38.2-3.2build1), libpipeline1 (= 1.5.7-2), libpixman-1-0 (= 0.42.2-1), libpkgconf3 (= 1.8.1-2), libpmix2t64 (= 5.0.1-4.1), libpng16-16t64 (= 1.6.43-5build1), libpopt0 (= 1.19+dfsg-1), libproc2-0 (= 2:4.0.4-4ubuntu3), libpsl5t64 (= 0.21.2-1.1build1), libpthread-stubs0-dev (= 0.4-1build2), libpython3-all-dev (= 3.12.2-0ubuntu2), libpython3-dev (= 3.12.2-0ubuntu2), libpython3-stdlib (= 3.12.2-0ubuntu2), libpython3.12-dev (= 3.12.2-4build4), libpython3.12-minimal (= 3.12.2-4build4), libpython3.12-stdlib (= 3.12.2-4build4), libpython3.12t64 (= 3.12.2-4build4), libqhull-r8.0 (= 2020.2-6), libqt5core5t64 (= 5.15.12+dfsg-3ubuntu6), libqt5dbus5t64 (= 5.15.12+dfsg-3ubuntu6), libqt5designer5 (= 5.15.12-2build2), libqt5gui5t64 (= 5.15.12+dfsg-3ubuntu6), libqt5help5 (= 5.15.12-2build2), libqt5network5t64 (= 5.15.12+dfsg-3ubuntu6), libqt5opengl5t64 (= 5.15.12+dfsg-3ubuntu6), libqt5printsupport5t64 (= 5.15.12+dfsg-3ubuntu6), libqt5sql5t64 (= 5.15.12+dfsg-3ubuntu6), libqt5test5t64 (= 5.15.12+dfsg-3ubuntu6), libqt5widgets5t64 (= 5.15.12+dfsg-3ubuntu6), libqt5xml5t64 (= 5.15.12+dfsg-3ubuntu6), libraqm0 (= 0.10.1-1), librdmacm1t64 (= 50.0-2build1), libreadline8t64 (= 8.2-4build1), librtmp1 (= 2.4+20151223.gitfa8646d.1-2build7), libsasl2-2 (= 2.1.28+dfsg1-5ubuntu2), libsasl2-modules-db (= 2.1.28+dfsg1-5ubuntu2), libseccomp2 (= 2.5.5-1ubuntu3), libselinux1 (= 3.5-2ubuntu2), libsemanage-common (= 3.5-1build4), libsemanage2 (= 3.5-1build4), libsensors-config (= 1:3.6.0-9build1), libsensors5 (= 1:3.6.0-9build1), libsepol2 (= 3.5-2), libsframe1 (= 2.42-4ubuntu2), libsharpyuv-dev (= 1.3.2-0.4build2), libsharpyuv0 (= 1.3.2-0.4build2), libsm6 (= 2:1.2.3-1build2), libsmartcols1 (= 2.39.3-9ubuntu3), libsqlite3-0 (= 3.45.1-1ubuntu2), libssh-4 (= 0.10.6-2build1), libssl-dev (= 3.0.13-0ubuntu3), libssl3t64 (= 3.0.13-0ubuntu3), libssm-dev (= 1.4.0-2), libssm2 (= 1.4.0-2), libstdc++-13-dev (= 13.2.0-23ubuntu3), libstdc++6 (= 14-20240330-1ubuntu2), libsub-override-perl (= 0.10-1), libsystemd-shared (= 255.4-1ubuntu5), libsystemd0 (= 255.4-1ubuntu5), libsz2 (= 1.1.2-1), libtasn1-6 (= 4.19.0-3), libtcl8.6 (= 8.6.14+dfsg-1build1), libthai-data (= 0.1.29-2), libthai0 (= 0.1.29-2), libtiff-dev (= 4.5.1+git230720-4ubuntu2), libtiff6 (= 4.5.1+git230720-4ubuntu2), libtiffxx6 (= 4.5.1+git230720-4ubuntu2), libtinfo6 (= 6.4+20240113-1ubuntu1), libtk8.6 (= 8.6.14-1build1), libtool (= 2.4.7-7), libubsan1 (= 14-20240330-1ubuntu2), libuchardet0 (= 0.0.8-1), libudev1 (= 255.4-1ubuntu5), libunistring5 (= 1.1-2), libuuid1 (= 2.39.3-9ubuntu3), libvulkan1 (= 1.3.275.0-1), libwacom-common (= 2.10.0-2), libwacom9 (= 2.10.0-2), libwayland-client0 (= 1.22.0-2.1), libwayland-cursor0 (= 1.22.0-2.1), libwayland-egl1 (= 1.22.0-2.1), libwayland-server0 (= 1.22.0-2.1), libwebp-dev (= 1.3.2-0.4build2), libwebp7 (= 1.3.2-0.4build2), libwebpdecoder3 (= 1.3.2-0.4build2), libwebpdemux2 (= 1.3.2-0.4build2), libwebpmux3 (= 1.3.2-0.4build2), libwxbase3.2-1t64 (= 3.2.4+dfsg-4), libwxgtk-gl3.2-1t64 (= 3.2.4+dfsg-4), libwxgtk3.2-1t64 (= 3.2.4+dfsg-4), libx11-6 (= 2:1.8.7-1), libx11-data (= 2:1.8.7-1), libx11-dev (= 2:1.8.7-1), libx11-xcb1 (= 2:1.8.7-1), libxau-dev (= 1:1.0.9-1build5), libxau6 (= 1:1.0.9-1build5), libxcb-dri2-0 (= 1.15-1), libxcb-dri3-0 (= 1.15-1), libxcb-glx0 (= 1.15-1), libxcb-icccm4 (= 0.4.1-1.1build2), libxcb-image0 (= 0.4.0-2), libxcb-keysyms1 (= 0.4.0-1build3), libxcb-present0 (= 1.15-1), libxcb-randr0 (= 1.15-1), libxcb-render-util0 (= 0.3.9-1build3), libxcb-render0 (= 1.15-1), libxcb-shape0 (= 1.15-1), libxcb-shm0 (= 1.15-1), libxcb-sync1 (= 1.15-1), libxcb-util1 (= 0.4.0-1build2), libxcb-xfixes0 (= 1.15-1), libxcb-xinerama0 (= 1.15-1), libxcb-xinput0 (= 1.15-1), libxcb-xkb1 (= 1.15-1), libxcb1 (= 1.15-1), libxcb1-dev (= 1.15-1), libxcomposite1 (= 1:0.4.5-1build2), libxcursor1 (= 1:1.2.1-1), libxdamage1 (= 1:1.1.6-1), libxdmcp-dev (= 1:1.1.3-0ubuntu5), libxdmcp6 (= 1:1.1.3-0ubuntu5), libxext6 (= 2:1.3.4-1build1), libxfixes3 (= 1:6.0.0-2), libxft2 (= 2.3.6-1), libxi6 (= 2:1.8.1-1), libxinerama1 (= 2:1.1.4-3), libxkbcommon-x11-0 (= 1.6.0-1), libxkbcommon0 (= 1.6.0-1), libxml2 (= 2.9.14+dfsg-1.3ubuntu3), libxnvctrl0 (= 510.47.03-0ubuntu4), libxrandr2 (= 2:1.5.2-2), libxrender1 (= 1:0.9.10-1.1), libxshmfence1 (= 1.3-1build4), libxslt1.1 (= 1.1.39-0exp1build1), libxss1 (= 1:1.2.3-1build2), libxtst6 (= 2:1.2.3-1.1), libxxf86vm1 (= 1:1.1.4-1build3), libxxhash0 (= 0.8.2-2), libzstd-dev (= 1.5.5+dfsg2-2), libzstd1 (= 1.5.5+dfsg2-2), linux-libc-dev (= 6.8.0-20.20), login (= 1:4.13+dfsg1-4ubuntu1), lto-disabled-list (= 47), m4 (= 1.4.19-4), make (= 4.3-4.1build1), man-db (= 2.12.0-4build1), mawk (= 1.3.4.20240123-1), media-types (= 10.1.0), mount (= 2.39.3-9ubuntu3), ncurses-base (= 6.4+20240113-1ubuntu1), ncurses-bin (= 6.4+20240113-1ubuntu1), netbase (= 6.4), ocl-icd-libopencl1 (= 2.3.2-1), openssl (= 3.0.13-0ubuntu3), passwd (= 1:4.13+dfsg1-4ubuntu1), patch (= 2.7.6-7build2), perl (= 5.38.2-3.2build1), perl-base (= 5.38.2-3.2build1), perl-modules-5.38 (= 5.38.2-3.2build1), pkg-config (= 1.8.1-2), pkgconf (= 1.8.1-2), pkgconf-bin (= 1.8.1-2), po-debconf (= 1.0.21+nmu1), procps (= 2:4.0.4-4ubuntu3), pybind11-dev (= 2.11.1-2), pymol-data (= 2.5.0+dfsg-1build5), python-matplotlib-data (= 3.6.3-1ubuntu3), python3 (= 3.12.2-0ubuntu2), python3-all (= 3.12.2-0ubuntu2), python3-all-dev (= 3.12.2-0ubuntu2), python3-appdirs (= 1.4.4-4), python3-attr (= 23.2.0-2), python3-biopython (= 1.81+dfsg-3), python3-brotli (= 1.1.0-2build1), python3-cairo (= 1.25.1-2build2), python3-certifi (= 2023.11.17-1), python3-chardet (= 5.2.0+dfsg-1), python3-contourpy (= 1.0.7-2build1), python3-cycler (= 0.11.0-2), python3-dateutil (= 2.8.2-3), python3-decorator (= 5.1.1-5), python3-dev (= 3.12.2-0ubuntu2), python3-fonttools (= 4.46.0-1build2), python3-freetype (= 2.4.0-1), python3-fs (= 2.4.16-3), python3-h5py (= 3.10.0-1ubuntu2), python3-h5py-serial (= 3.10.0-1ubuntu2), python3-idna (= 3.6-2), python3-iniconfig (= 1.1.1-2), python3-kiwisolver (= 1.4.4-2build1), python3-lxml (= 5.1.0-1build2), python3-lz4 (= 4.0.2+dfsg-1build4), python3-matplotlib (= 3.6.3-1ubuntu3), python3-minimal (= 3.12.2-0ubuntu2), python3-mpmath (= 1.2.1-3), python3-mrcfile (= 1.4.3-3), python3-msgpack (= 1.0.3-3build1), python3-numpy (= 1:1.24.2-3ubuntu1), python3-nxmx (= 0.0.3-2), python3-opengl (= 3.1.7+dfsg-1), python3-orderedset (= 2.0.3+ds1-2), python3-packaging (= 23.2-1), python3-pil (= 10.2.0-1), python3-pil.imagetk (= 10.2.0-1), python3-pint (= 0.19.2-1), python3-pip (= 24.0+dfsg-1ubuntu1), python3-pkg-resources (= 68.1.2-2ubuntu1), python3-pluggy (= 1.4.0-1), python3-procrunner (= 2.3.3-1), python3-psutil (= 5.9.8-2build1), python3-pycbf (= 0.9.7+dfsg1-3.1build2), python3-pymol (= 2.5.0+dfsg-1build5), python3-pyparsing (= 3.1.1-1), python3-pyqt5 (= 5.15.10+dfsg-1build4), python3-pyqt5.qtopengl (= 5.15.10+dfsg-1build4), python3-pyqt5.sip (= 12.13.0-1build3), python3-pytest (= 8.0.2-1), python3-reportlab (= 4.1.0-4), python3-requests (= 2.31.0+dfsg-1ubuntu1), python3-rlpycairo (= 0.3.0-3), python3-scipy (= 1.11.4-6), python3-setuptools (= 68.1.2-2ubuntu1), python3-six (= 1.16.0-4), python3-sympy (= 1.12-7), python3-tk (= 3.12.2-3ubuntu4), python3-tqdm (= 4.66.2-2), python3-tz (= 2024.1-2), python3-ufolib2 (= 0.16.0+dfsg1-1), python3-urllib3 (= 2.0.7-1), python3-wheel (= 0.42.0-2), python3-wxgtk4.0 (= 4.2.1+dfsg-3build1), python3.12 (= 3.12.2-4build4), python3.12-dev (= 3.12.2-4build4), python3.12-minimal (= 3.12.2-4build4), readline-common (= 8.2-4build1), rpcsvc-proto (= 1.4.2-0ubuntu6), rsync (= 3.2.7-1build2), scons (= 4.5.2+dfsg-1), sed (= 4.9-2), sensible-utils (= 0.0.22), sfftw-dev (= 2.1.5-6build2), sfftw2 (= 2.1.5-6build2), sgml-base (= 1.31), shared-mime-info (= 2.4-1build2), sphinx-rtd-theme-common (= 2.0.0+dfsg-1), systemd (= 255.4-1ubuntu5), systemd-dev (= 255.4-1ubuntu6), systemd-sysv (= 255.4-1ubuntu5), sysvinit-utils (= 3.08-6ubuntu2), tar (= 1.35+dfsg-3), tk8.6-blt2.5 (= 2.5.3+dfsg-7), tzdata (= 2024a-1ubuntu1), ubuntu-mono (= 24.04-0ubuntu1), unicode-data (= 15.1.0-1), util-linux (= 2.39.3-9ubuntu3), w3c-sgml-lib (= 1.3-3), x11-common (= 1:7.7+23ubuntu2), x11proto-dev (= 2023.2-1), xfonts-encodings (= 1:1.0.5-0ubuntu2), xfonts-utils (= 1:7.7+6build2), xkb-data (= 2.41-2), xml-core (= 0.19), xorg-sgml-doctools (= 1:1.11-1.1), xtrans-dev (= 1.4.0-1), xz-utils (= 5.6.1+really5.4.5-1build1), zlib1g (= 1:1.3.dfsg-3.1ubuntu2), zlib1g-dev (= 1:1.3.dfsg-3.1ubuntu2) Environment: DEB_BUILD_OPTIONS="parallel=4" DEB_BUILD_PROFILES="noudeb" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1711907205" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libcctbx-dev_2023.12+ds2+~3.17.0+ds1-4build2_s390x.deb ------------------------------------------------------ new Debian package, version 2.0. size 1191642 bytes: control archive=23400 bytes. 3048 bytes, 56 lines control 63704 bytes, 826 lines md5sums Package: libcctbx-dev Source: cctbx Version: 2023.12+ds2+~3.17.0+ds1-4build2 Architecture: s390x Maintainer: Ubuntu Developers Installed-Size: 8583 Depends: libann-cctbx-dev, libboost-python-dev, libccp4-dev, libcctbx0 (= 2023.12+ds2+~3.17.0+ds1-4build2) Section: devel Priority: optional Homepage: https://github.com/cctbx/cctbx_project Description: Computational Crystallography Toolbox - headers Computational Crystallography Toolbox contains following modules: - annlib_adaptbx: - boost_adaptbx: wrappers for Boost functionality in CCTBX - cbflib_adaptbx: - ccp4io_adaptbx: - cctbx: Libraries for general crystallographic applications, useful for both small-molecule and macro-molecular crystallography. - cma_es: - crys3d: Modules for the display of molecules, electron density, and reciprocal space data. - dxtbx: The Diffraction Image Toolbox, a library for handling X-ray detector data of arbitrary complexity from a variety of standard formats. - fable: Fortran EMulation library for porting Fortran77 to C++. - gltbx: Python bindings for OpenGL - iotbx: Working with common crystallographic file formats. - libtbx: The build system common to all other modules. This includes a very thin wrapper around the SCons software construction tool. It also contains many useful frameworks and utilities to simplify application development, including tools for regression testing, parallelization across multiprocessor systems and managed clusters, and a flexible, modular configuration syntax called PHIL (Python Hierarchial Interface Language) used throughout the CCTBX. - mmtbx: Functionality specific to macromolecular crystallography. This includes all of the machinery required for setup of geometry restraints, bulk solvent correction and scaling, analysis of macromolecular diffraction data, calculation of weighted map coefficients, and most of the methods implemented in phenix.refine. The majority of infrastructure for the MolProbity validation server (and Phenix equivalent) is also located here. - omptbx: OpenMP interface. - rstbx: A reciprocal space toolbox to autoindex small molecule Bragg diffraction, given the reciprocal space vectors. - scitbx: General scientific calculations. his includes a family of high-level C++ array types, a fast Fourier transform library, and a C++ port of the popular L-BFGS quasi-Newton minimizer. - smtbx: Small-Molecule crystallography. - spotfinder: - tbxx: - wxtbx: wxPython controls used in the Phenix GUI and various utilities . This package provide everythings needed to link against the cctbx libraries. Original-Maintainer: Debian Science Maintainers drwxr-xr-x root/root 0 2024-03-31 17:46 ./ drwxr-xr-x root/root 0 2024-03-31 17:46 ./usr/ drwxr-xr-x root/root 0 2024-03-31 17:46 ./usr/include/ drwxr-xr-x root/root 0 2024-03-31 17:46 ./usr/include/annlib_adaptbx/ -rw-r--r-- root/root 2068 2024-03-31 17:46 ./usr/include/annlib_adaptbx/ann_adaptor.h drwxr-xr-x root/root 0 2024-03-31 17:46 ./usr/include/boost_adaptbx/ -rw-r--r-- root/root 933 2023-12-31 12:57 ./usr/include/boost_adaptbx/boost_range_python.hpp -rw-r--r-- root/root 930 2023-12-31 12:57 ./usr/include/boost_adaptbx/convertible.h -rw-r--r-- root/root 3412 2023-12-31 12:57 ./usr/include/boost_adaptbx/exporting.hpp -rw-r--r-- root/root 3770 2023-12-31 12:57 ./usr/include/boost_adaptbx/floating_point_exceptions.h drwxr-xr-x root/root 0 2023-12-31 12:57 ./usr/include/boost_adaptbx/graph/ -rw-r--r-- root/root 1588 2023-12-31 12:57 ./usr/include/boost_adaptbx/graph/graph_export_adaptor.hpp -rw-r--r-- root/root 2301 2023-12-31 12:57 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12:57 ./usr/include/cctbx/math/mod.h -rw-r--r-- root/root 3845 2023-12-31 12:57 ./usr/include/cctbx/miller.h drwxr-xr-x root/root 0 2023-12-31 12:57 ./usr/include/cctbx/miller/ -rw-r--r-- root/root 2269 2023-12-31 12:57 ./usr/include/cctbx/miller/amplitude_normalisation.h -rw-r--r-- root/root 9005 2023-12-31 12:57 ./usr/include/cctbx/miller/asu.h -rw-r--r-- root/root 6314 2023-12-31 12:57 ./usr/include/cctbx/miller/bins.h -rw-r--r-- root/root 1917 2023-12-31 12:57 ./usr/include/cctbx/miller/change_basis.h -rw-r--r-- root/root 7029 2023-12-31 12:57 ./usr/include/cctbx/miller/expand_to_p1.h -rw-r--r-- root/root 4463 2023-12-31 12:57 ./usr/include/cctbx/miller/f_calc_map.h -rw-r--r-- root/root 3823 2023-12-31 12:57 ./usr/include/cctbx/miller/index_generator.h -rw-r--r-- root/root 2578 2023-12-31 12:57 ./usr/include/cctbx/miller/index_span.h -rw-r--r-- root/root 12427 2023-12-31 12:57 ./usr/include/cctbx/miller/lookup_utils.h -rw-r--r-- root/root 2185 2023-12-31 12:57 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drwxr-xr-x root/root 0 2023-12-31 12:57 ./usr/include/cctbx/multipolar/ -rw-r--r-- root/root 1824 2023-12-31 12:57 ./usr/include/cctbx/multipolar/aspherical.h -rw-r--r-- root/root 2029 2023-12-31 12:57 ./usr/include/cctbx/restraints.h drwxr-xr-x root/root 0 2023-12-31 12:57 ./usr/include/cctbx/sgtbx/ -rw-r--r-- root/root 1655 2023-12-31 12:57 ./usr/include/cctbx/sgtbx/basic.h -rw-r--r-- root/root 4194 2023-12-31 12:57 ./usr/include/cctbx/sgtbx/brick.h -rw-r--r-- root/root 10494 2023-12-31 12:57 ./usr/include/cctbx/sgtbx/change_of_basis_op.h drwxr-xr-x root/root 0 2023-12-31 12:57 ./usr/include/cctbx/sgtbx/direct_space_asu/ drwxr-xr-x root/root 0 2023-12-31 12:57 ./usr/include/cctbx/sgtbx/direct_space_asu/proto/ -rw-r--r-- root/root 1762 2023-12-31 12:57 ./usr/include/cctbx/sgtbx/direct_space_asu/proto/asymmetric_unit.h -rw-r--r-- root/root 11776 2023-12-31 12:57 ./usr/include/cctbx/sgtbx/direct_space_asu/proto/cut.h -rw-r--r-- root/root 7108 2023-12-31 12:57 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2023-12-31 12:57 ./usr/include/cctbx/symmetry_search/ -rw-r--r-- root/root 6094 2023-12-31 12:57 ./usr/include/cctbx/symmetry_search/translation_refinement.h -rw-r--r-- root/root 492 2023-12-31 12:57 ./usr/include/cctbx/tagged_value.h drwxr-xr-x root/root 0 2023-12-31 12:57 ./usr/include/cctbx/translation_search/ -rw-r--r-- root/root 2224 2023-12-31 12:57 ./usr/include/cctbx/translation_search/fast_nv1995.h drwxr-xr-x root/root 0 2023-12-31 12:57 ./usr/include/cctbx/translation_search/fast_nv1995/ -rw-r--r-- root/root 2516 2023-12-31 12:57 ./usr/include/cctbx/translation_search/fast_nv1995/combinations.h -rw-r--r-- root/root 1521 2023-12-31 12:57 ./usr/include/cctbx/translation_search/fast_nv1995/intermediates.h -rw-r--r-- root/root 8723 2023-12-31 12:57 ./usr/include/cctbx/translation_search/fast_nv1995/summations.h -rw-r--r-- root/root 4175 2023-12-31 12:57 ./usr/include/cctbx/translation_search/fast_terms.h -rw-r--r-- root/root 138 2023-12-31 12:57 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13:23 ./usr/include/dxtbx/imageset.h drwxr-xr-x root/root 0 2023-11-03 13:23 ./usr/include/dxtbx/masking/ -rw-r--r-- root/root 12547 2023-11-03 13:23 ./usr/include/dxtbx/masking/goniometer_shadow_masking.h -rw-r--r-- root/root 7329 2023-11-03 13:23 ./usr/include/dxtbx/masking/masking.h drwxr-xr-x root/root 0 2023-11-03 13:23 ./usr/include/dxtbx/model/ -rw-r--r-- root/root 30380 2023-11-03 13:23 ./usr/include/dxtbx/model/beam.h drwxr-xr-x root/root 0 2023-11-03 13:23 ./usr/include/dxtbx/model/boost_python/ -rw-r--r-- root/root 6976 2023-11-03 13:23 ./usr/include/dxtbx/model/boost_python/pickle_suite.h -rw-r--r-- root/root 2383 2023-11-03 13:23 ./usr/include/dxtbx/model/boost_python/to_from_dict.h -rw-r--r-- root/root 51769 2023-11-03 13:23 ./usr/include/dxtbx/model/crystal.h -rw-r--r-- root/root 24739 2023-11-03 13:23 ./usr/include/dxtbx/model/detector.h -rw-r--r-- root/root 7483 2023-11-03 13:23 ./usr/include/dxtbx/model/experiment.h -rw-r--r-- root/root 18502 2023-11-03 13:23 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2023-12-31 12:57 ./usr/include/smtbx/refinement/constraints/u_eq_dependent_u_iso.h -rw-r--r-- root/root 1015 2023-12-31 12:57 ./usr/include/smtbx/refinement/constraints/u_iso_dependent_u_iso.h -rw-r--r-- root/root 148 2023-12-31 12:57 ./usr/include/smtbx/refinement/import_cctbx_xray.h -rw-r--r-- root/root 20577 2023-12-31 12:57 ./usr/include/smtbx/refinement/least_squares.h drwxr-xr-x root/root 0 2023-12-31 12:57 ./usr/include/smtbx/refinement/restraints/ -rw-r--r-- root/root 5055 2023-12-31 12:57 ./usr/include/smtbx/refinement/restraints/origin_fixing.h -rw-r--r-- root/root 2566 2023-12-31 12:57 ./usr/include/smtbx/refinement/weighting_schemes.h drwxr-xr-x root/root 0 2023-12-31 12:57 ./usr/include/smtbx/structure_factors/ drwxr-xr-x root/root 0 2023-12-31 12:57 ./usr/include/smtbx/structure_factors/direct/ -rw-r--r-- root/root 52104 2023-12-31 12:57 ./usr/include/smtbx/structure_factors/direct/standard_xray.h -rw-r--r-- root/root 16076 2023-12-31 12:57 ./usr/include/smtbx/structure_factors/direct/table_based.h drwxr-xr-x root/root 0 2024-03-31 17:46 ./usr/include/spotfinder/ drwxr-xr-x root/root 0 2023-12-31 12:57 ./usr/include/spotfinder/applications/ -rw-r--r-- root/root 2023 2023-12-31 12:57 ./usr/include/spotfinder/applications/find_active_area.h drwxr-xr-x root/root 0 2023-12-31 12:57 ./usr/include/spotfinder/core_toolbox/ drwxr-xr-x root/root 0 2023-12-31 12:57 ./usr/include/spotfinder/core_toolbox/boost_python/ -rw-r--r-- root/root 3218 2023-12-31 12:57 ./usr/include/spotfinder/core_toolbox/boost_python/singlemask.h -rw-r--r-- root/root 4008 2023-12-31 12:57 ./usr/include/spotfinder/core_toolbox/distl.h -rw-r--r-- root/root 2509 2023-12-31 12:57 ./usr/include/spotfinder/core_toolbox/hough.h -rw-r--r-- root/root 15844 2023-12-31 12:57 ./usr/include/spotfinder/core_toolbox/libdistl.h -rw-r--r-- root/root 5293 2023-12-31 12:57 ./usr/include/spotfinder/core_toolbox/spot_shapes.h -rw-r--r-- root/root 276 2023-12-31 12:57 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root/root 0 2024-03-31 17:46 ./usr/lib/cctbx/ drwxr-xr-x root/root 0 2024-03-31 17:46 ./usr/lib/cctbx/python3.12/ lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/cctbx/python3.12/include -> ../../../include/cctbx drwxr-xr-x root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/ lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libann_adaptor.so -> libann_adaptor.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libasymmetric_map.so -> libasymmetric_map.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libcbf-private.so -> libcbf-private.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libccp4io.so -> libccp4io.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libcctbx.so -> libcctbx.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libcctbx_sgtbx_asu.so -> libcctbx_sgtbx_asu.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libdxtbxspotfinder.so -> libdxtbxspotfinder.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libiotbx_mtz.so -> libiotbx_mtz.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libiotbx_pdb.so -> libiotbx_pdb.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libiotbx_xplor.so -> libiotbx_xplor.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libmmtbx_masks.so -> libmmtbx_masks.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libmmtbx_tls.so -> libmmtbx_tls.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libomptbx.so -> libomptbx.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/librstbx.so -> librstbx.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libscitbx_boost_python.so -> libscitbx_boost_python.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libscitbx_minpack.so -> libscitbx_minpack.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libscitbx_slatec.so -> libscitbx_slatec.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libsmtbx_refinement_constraints.so -> libsmtbx_refinement_constraints.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libspotfinder.so -> libspotfinder.so.0.0.1 drwxr-xr-x root/root 0 2024-03-31 17:46 ./usr/share/ drwxr-xr-x root/root 0 2024-03-31 17:46 ./usr/share/doc/ drwxr-xr-x root/root 0 2024-03-31 17:46 ./usr/share/doc/libcctbx-dev/ lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/share/doc/libcctbx-dev/changelog.Debian.gz -> ../libcctbx0/changelog.Debian.gz -rw-r--r-- root/root 38654 2024-02-28 12:45 ./usr/share/doc/libcctbx-dev/copyright libcctbx0_2023.12+ds2+~3.17.0+ds1-4build2_s390x.deb --------------------------------------------------- new Debian package, version 2.0. size 2025022 bytes: control archive=2525 bytes. 3135 bytes, 56 lines control 1716 bytes, 21 lines md5sums 1076 bytes, 19 lines shlibs 75 bytes, 2 lines triggers Package: libcctbx0 Source: cctbx Version: 2023.12+ds2+~3.17.0+ds1-4build2 Architecture: s390x Maintainer: Ubuntu Developers Installed-Size: 6994 Depends: libann-cctbx0 (>= 1.1.2+doc), libboost-python1.83.0 (>= 1.83.0), libboost-python1.83.0-py312, libc6 (>= 2.38), libcbf1t64 (>= 0.9.7+dfsg1-2~), libccp4c0 (>= 8.0.0), libgcc-s1 (>= 4.0), libstdc++6 (>= 13.1) Section: libs Priority: optional Homepage: https://github.com/cctbx/cctbx_project Description: Computational Crystallography Toolbox - runtime libraries Computational Crystallography Toolbox contains following modules: - annlib_adaptbx: - boost_adaptbx: wrappers for Boost functionality in CCTBX - cbflib_adaptbx: - ccp4io_adaptbx: - cctbx: Libraries for general crystallographic applications, useful for both small-molecule and macro-molecular crystallography. - cma_es: - crys3d: Modules for the display of molecules, electron density, and reciprocal space data. - dxtbx: The Diffraction Image Toolbox, a library for handling X-ray detector data of arbitrary complexity from a variety of standard formats. - fable: Fortran EMulation library for porting Fortran77 to C++. - gltbx: Python bindings for OpenGL - iotbx: Working with common crystallographic file formats. - libtbx: The build system common to all other modules. This includes a very thin wrapper around the SCons software construction tool. It also contains many useful frameworks and utilities to simplify application development, including tools for regression testing, parallelization across multiprocessor systems and managed clusters, and a flexible, modular configuration syntax called PHIL (Python Hierarchial Interface Language) used throughout the CCTBX. - mmtbx: Functionality specific to macromolecular crystallography. This includes all of the machinery required for setup of geometry restraints, bulk solvent correction and scaling, analysis of macromolecular diffraction data, calculation of weighted map coefficients, and most of the methods implemented in phenix.refine. The majority of infrastructure for the MolProbity validation server (and Phenix equivalent) is also located here. - omptbx: OpenMP interface. - rstbx: A reciprocal space toolbox to autoindex small molecule Bragg diffraction, given the reciprocal space vectors. - scitbx: General scientific calculations. his includes a family of high-level C++ array types, a fast Fourier transform library, and a C++ port of the popular L-BFGS quasi-Newton minimizer. - smtbx: Small-Molecule crystallography. - spotfinder: - tbxx: - wxtbx: wxPython controls used in the Phenix GUI and various utilities . This package provide the cctbx runtime libraries. Original-Maintainer: Debian Science Maintainers drwxr-xr-x root/root 0 2024-03-31 17:46 ./ drwxr-xr-x root/root 0 2024-03-31 17:46 ./usr/ drwxr-xr-x root/root 0 2024-03-31 17:46 ./usr/lib/ drwxr-xr-x root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/ lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libann_adaptor.so.0 -> libann_adaptor.so.0.0.1 -rw-r--r-- root/root 47592 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libann_adaptor.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libasymmetric_map.so.0 -> libasymmetric_map.so.0.0.1 -rw-r--r-- root/root 314240 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libasymmetric_map.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libcbf-private.so.0 -> libcbf-private.so.0.0.1 -rw-r--r-- root/root 64232 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libcbf-private.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libccp4io.so.0 -> libccp4io.so.0.0.1 -rw-r--r-- root/root 10280 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libccp4io.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libcctbx.so.0 -> libcctbx.so.0.0.1 -rw-r--r-- root/root 2508944 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libcctbx.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libcctbx_sgtbx_asu.so.0 -> libcctbx_sgtbx_asu.so.0.0.1 -rw-r--r-- root/root 1540544 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libdxtbxspotfinder.so.0 -> libdxtbxspotfinder.so.0.0.1 -rw-r--r-- root/root 133688 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libdxtbxspotfinder.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libiotbx_mtz.so.0 -> libiotbx_mtz.so.0.0.1 -rw-r--r-- root/root 215976 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libiotbx_mtz.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libiotbx_pdb.so.0 -> libiotbx_pdb.so.0.0.1 -rw-r--r-- root/root 832632 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libiotbx_pdb.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libiotbx_xplor.so.0 -> libiotbx_xplor.so.0.0.1 -rw-r--r-- root/root 68296 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libiotbx_xplor.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libmmtbx_masks.so.0 -> libmmtbx_masks.so.0.0.1 -rw-r--r-- root/root 281560 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libmmtbx_masks.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libmmtbx_tls.so.0 -> libmmtbx_tls.so.0.0.1 -rw-r--r-- root/root 76376 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libmmtbx_tls.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libomptbx.so.0 -> libomptbx.so.0.0.1 -rw-r--r-- root/root 10392 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libomptbx.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/librstbx.so.0 -> librstbx.so.0.0.1 -rw-r--r-- root/root 129608 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/librstbx.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libscitbx_boost_python.so.0 -> libscitbx_boost_python.so.0.0.1 -rw-r--r-- root/root 27176 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libscitbx_boost_python.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libscitbx_minpack.so.0 -> libscitbx_minpack.so.0.0.1 -rw-r--r-- root/root 27056 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libscitbx_minpack.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libscitbx_slatec.so.0 -> libscitbx_slatec.so.0.0.1 -rw-r--r-- root/root 14424 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libscitbx_slatec.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libsmtbx_refinement_constraints.so.0 -> libsmtbx_refinement_constraints.so.0.0.1 -rw-r--r-- root/root 469624 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 lrwxrwxrwx root/root 0 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libspotfinder.so.0 -> libspotfinder.so.0.0.1 -rw-r--r-- root/root 305848 2024-03-31 17:46 ./usr/lib/s390x-linux-gnu/libspotfinder.so.0.0.1 drwxr-xr-x root/root 0 2024-03-31 17:46 ./usr/share/ drwxr-xr-x root/root 0 2024-03-31 17:46 ./usr/share/doc/ drwxr-xr-x root/root 0 2024-03-31 17:46 ./usr/share/doc/libcctbx0/ -rw-r--r-- root/root 1519 2024-03-31 17:46 ./usr/share/doc/libcctbx0/changelog.Debian.gz -rw-r--r-- root/root 38654 2024-02-28 12:45 ./usr/share/doc/libcctbx0/copyright python3-cctbx_2023.12+ds2+~3.17.0+ds1-4build2_s390x.deb ------------------------------------------------------- new Debian package, version 2.0. size 27213488 bytes: control archive=125407 bytes. 3844 bytes, 56 lines control 487966 bytes, 5037 lines md5sums 273 bytes, 12 lines * postinst #!/bin/sh 386 bytes, 12 lines * prerm #!/bin/sh 11500 bytes, 169 lines shlibs 75 bytes, 2 lines triggers Package: python3-cctbx Source: cctbx Version: 2023.12+ds2+~3.17.0+ds1-4build2 Architecture: s390x Maintainer: Ubuntu Developers Installed-Size: 175248 Depends: ca-certificates, libcctbx-dev (= 2023.12+ds2+~3.17.0+ds1-4build2), libcctbx0 (= 2023.12+ds2+~3.17.0+ds1-4build2), python3-pycbf (>= 0.9.7+dfsg1-2~), python3 (<< 3.13), python3 (>= 3.12~), python3-h5py (>= 3), python3-matplotlib, python3-mrcfile, python3-numpy (>= 1:1.22.0), python3-numpy-abi9, python3-nxmx, python3-orderedset, python3-pil, python3-pint, python3-procrunner, python3-pymol, python3-requests, python3-scipy, python3-six, python3-tqdm, python3-wxgtk4.0, python3:any, libantlr3c-3.4-0 | libantlr3c-antlrdbg-3.4-0, libboost-numpy1.83.0 (>= 1.83.0), libboost-numpy1.83.0-py312, libboost-python1.83.0 (>= 1.83.0), libboost-python1.83.0-py312, libboost-thread1.83.0 (>= 1.83.0), libc6 (>= 2.38), libcbf1t64 (>= 0.9.7+dfsg1-2~), libccp4c0 (>= 8.0.0), libgcc-s1 (>= 4.0), libgl1, libglu1-mesa | libglu1, libhdf5-103-1t64, libmmdb2-0 (>= 2.0.22), libssm2 (>= 1.4.0), libstdc++6 (>= 13.1) Section: python Priority: optional Homepage: https://github.com/cctbx/cctbx_project Description: Python Toolbox for crystallography Computational Crystallography Toolbox contains following modules: - annlib_adaptbx: - boost_adaptbx: wrappers for Boost functionality in CCTBX - cbflib_adaptbx: - ccp4io_adaptbx: - cctbx: Libraries for general crystallographic applications, useful for both small-molecule and macro-molecular crystallography. - cma_es: - crys3d: Modules for the display of molecules, electron density, and reciprocal space data. - dxtbx: The Diffraction Image Toolbox, a library for handling X-ray detector data of arbitrary complexity from a variety of standard formats. - fable: Fortran EMulation library for porting Fortran77 to C++. - gltbx: Python bindings for OpenGL - iotbx: Working with common crystallographic file formats. - libtbx: The build system common to all other modules. This includes a very thin wrapper around the SCons software construction tool. It also contains many useful frameworks and utilities to simplify application development, including tools for regression testing, parallelization across multiprocessor systems and managed clusters, and a flexible, modular configuration syntax called PHIL (Python Hierarchial Interface Language) used throughout the CCTBX. - mmtbx: Functionality specific to macromolecular crystallography. This includes all of the machinery required for setup of geometry restraints, bulk solvent correction and scaling, analysis of macromolecular diffraction data, calculation of weighted map coefficients, and most of the methods implemented in phenix.refine. The majority of infrastructure for the MolProbity validation server (and Phenix equivalent) is also located here. - omptbx: OpenMP interface. - rstbx: A reciprocal space toolbox to autoindex small molecule Bragg diffraction, given the reciprocal space vectors. - scitbx: General scientific calculations. his includes a family of high-level C++ array types, a fast Fourier transform library, and a C++ port of the popular L-BFGS quasi-Newton minimizer. - smtbx: Small-Molecule crystallography. - spotfinder: - tbxx: - wxtbx: wxPython controls used in the Phenix GUI and various utilities . This package provide a selected collection of python modules from the cctbx project. Original-Maintainer: Debian Science Maintainers drwxr-xr-x root/root 0 2024-03-31 17:46 ./ drwxr-xr-x root/root 0 2024-03-31 17:46 ./usr/ drwxr-xr-x root/root 0 2024-03-31 17:46 ./usr/bin/ -rwxr-xr-x root/root 3260 2024-03-31 17:46 ./usr/bin/annlib.python -rwxr-xr-x root/root 3803 2024-03-31 17:46 ./usr/bin/annlib.show_build_path -rwxr-xr-x root/root 3803 2024-03-31 17:46 ./usr/bin/annlib.show_dist_paths -rwxr-xr-x root/root 3775 2024-03-31 17:46 ./usr/bin/boost.gcd -rwxr-xr-x root/root 3775 2024-03-31 17:46 ./usr/bin/boost.lcm -rwxr-xr-x root/root 3259 2024-03-31 17:46 ./usr/bin/boost.python -rwxr-xr-x root/root 3802 2024-03-31 17:46 ./usr/bin/boost.show_build_path -rwxr-xr-x root/root 3802 2024-03-31 17:46 ./usr/bin/boost.show_dist_paths -rwxr-xr-x root/root 3827 2024-03-31 17:46 ./usr/bin/boost_adaptbx.divide_by_zero -rwxr-xr-x root/root 3831 2024-03-31 17:46 ./usr/bin/boost_adaptbx.double_overflow -rwxr-xr-x root/root 3799 2024-03-31 17:46 ./usr/bin/boost_adaptbx.inexact -rwxr-xr-x 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-rwxr-xr-x root/root 3771 2024-03-31 17:46 ./usr/bin/libtbx.env_run -rwxr-xr-x root/root 3783 2024-03-31 17:46 ./usr/bin/libtbx.epydoc_run -rwxr-xr-x root/root 3711 2024-03-31 17:46 ./usr/bin/libtbx.exec -rwxr-xr-x root/root 3827 2024-03-31 17:46 ./usr/bin/libtbx.extract_code_from_txt -rwxr-xr-x root/root 3791 2024-03-31 17:46 ./usr/bin/libtbx.find_clutter -rwxr-xr-x root/root 3783 2024-03-31 17:46 ./usr/bin/libtbx.find_files -rwxr-xr-x root/root 3823 2024-03-31 17:46 ./usr/bin/libtbx.find_in_repositories -rwxr-xr-x root/root 3831 2024-03-31 17:46 ./usr/bin/libtbx.find_old_style_classes -rwxr-xr-x root/root 3819 2024-03-31 17:46 ./usr/bin/libtbx.find_reserved_names -rwxr-xr-x root/root 3807 2024-03-31 17:46 ./usr/bin/libtbx.find_under_build -rwxr-xr-x root/root 3795 2024-03-31 17:46 ./usr/bin/libtbx.find_untested -rwxr-xr-x root/root 3819 2024-03-31 17:46 ./usr/bin/libtbx.find_unused_imports -rwxr-xr-x root/root 3843 2024-03-31 17:46 ./usr/bin/libtbx.find_unused_imports_crude -rwxr-xr-x root/root 3707 2024-03-31 17:46 ./usr/bin/libtbx.gdb -rwxr-xr-x root/root 3807 2024-03-31 17:46 ./usr/bin/libtbx.git_avoid_merges -rwxr-xr-x root/root 3759 2024-03-31 17:46 ./usr/bin/libtbx.help -rwxr-xr-x root/root 3799 2024-03-31 17:46 ./usr/bin/libtbx.import_all_ext -rwxr-xr-x root/root 3811 2024-03-31 17:46 ./usr/bin/libtbx.import_all_python -rwxr-xr-x root/root 3771 2024-03-31 17:46 ./usr/bin/libtbx.install -rwxr-xr-x root/root 3795 2024-03-31 17:46 ./usr/bin/libtbx.install_conda -rwxr-xr-x root/root 3715 2024-03-31 17:46 ./usr/bin/libtbx.latex -rwxr-xr-x root/root 3783 2024-03-31 17:46 ./usr/bin/libtbx.line_count -rwxr-xr-x root/root 3783 2024-03-31 17:46 ./usr/bin/libtbx.list_files -rwxr-xr-x root/root 3791 2024-03-31 17:46 ./usr/bin/libtbx.list_modules -rwxr-xr-x root/root 3871 2024-03-31 17:46 ./usr/bin/libtbx.list_source_files_sorted_by_size -rwxr-xr-x root/root 3779 2024-03-31 17:46 ./usr/bin/libtbx.make_dist -rwxr-xr-x root/root 3807 2024-03-31 17:46 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3823 2024-03-31 17:46 ./usr/bin/libtbx.run_pickled_function -rwxr-xr-x root/root 3815 2024-03-31 17:46 ./usr/bin/libtbx.run_tests_parallel -rwxr-xr-x root/root 3763 2024-03-31 17:46 ./usr/bin/libtbx.scons -rwxr-xr-x root/root 3835 2024-03-31 17:46 ./usr/bin/libtbx.seconds_since_the_epoch -rwxr-xr-x root/root 3819 2024-03-31 17:46 ./usr/bin/libtbx.sge_available_slots -rwxr-xr-x root/root 3807 2024-03-31 17:46 ./usr/bin/libtbx.sge_qstat_counts -rwxr-xr-x root/root 3703 2024-03-31 17:46 ./usr/bin/libtbx.sh -rwxr-xr-x root/root 3807 2024-03-31 17:46 ./usr/bin/libtbx.show_all_on_path -rwxr-xr-x root/root 3795 2024-03-31 17:46 ./usr/bin/libtbx.show_bin_path -rwxr-xr-x root/root 3815 2024-03-31 17:46 ./usr/bin/libtbx.show_build_options -rwxr-xr-x root/root 3803 2024-03-31 17:46 ./usr/bin/libtbx.show_build_path -rwxr-xr-x root/root 3807 2024-03-31 17:46 ./usr/bin/libtbx.show_but_no_repr -rwxr-xr-x root/root 3795 2024-03-31 17:46 ./usr/bin/libtbx.show_commands -rwxr-xr-x root/root 3815 2024-03-31 17:46 ./usr/bin/libtbx.show_date_and_time -rwxr-xr-x root/root 3803 2024-03-31 17:46 ./usr/bin/libtbx.show_dist_paths -rwxr-xr-x root/root 3775 2024-03-31 17:46 ./usr/bin/libtbx.show_env -rwxr-xr-x root/root 3815 2024-03-31 17:46 ./usr/bin/libtbx.show_environ_usage -rwxr-xr-x root/root 3831 2024-03-31 17:46 ./usr/bin/libtbx.show_full_command_path -rwxr-xr-x root/root 3815 2024-03-31 17:46 ./usr/bin/libtbx.show_host_and_user -rwxr-xr-x root/root 3815 2024-03-31 17:46 ./usr/bin/libtbx.show_include_paths -rwxr-xr-x root/root 3795 2024-03-31 17:46 ./usr/bin/libtbx.show_lib_path -rwxr-xr-x root/root 3839 2024-03-31 17:46 ./usr/bin/libtbx.show_module_dependencies -rwxr-xr-x root/root 3843 2024-03-31 17:46 ./usr/bin/libtbx.show_number_of_processors -rwxr-xr-x root/root 3823 2024-03-31 17:46 ./usr/bin/libtbx.show_numeric_version -rwxr-xr-x root/root 3815 2024-03-31 17:46 ./usr/bin/libtbx.show_numpy_version -rwxr-xr-x root/root 3839 2024-03-31 17:46 ./usr/bin/libtbx.show_python_dependencies -rwxr-xr-x root/root 3847 2024-03-31 17:46 ./usr/bin/libtbx.show_python_sys_executable -rwxr-xr-x root/root 3803 2024-03-31 17:46 ./usr/bin/libtbx.show_pythonpath -rwxr-xr-x root/root 3827 2024-03-31 17:46 ./usr/bin/libtbx.show_repository_paths -rwxr-xr-x root/root 3783 2024-03-31 17:46 ./usr/bin/libtbx.show_tests -rwxr-xr-x root/root 3819 2024-03-31 17:46 ./usr/bin/libtbx.show_variable_names -rwxr-xr-x root/root 3819 2024-03-31 17:46 ./usr/bin/libtbx.start_binary_bundle -rwxr-xr-x root/root 3795 2024-03-31 17:46 ./usr/bin/libtbx.start_process -rwxr-xr-x root/root 3711 2024-03-31 17:46 ./usr/bin/libtbx.tcsh -rwxr-xr-x root/root 3766 2024-03-31 17:46 ./usr/bin/libtbx.unpack_in_sources -rwxr-xr-x root/root 3727 2024-03-31 17:46 ./usr/bin/libtbx.valgrind -rwxr-xr-x root/root 3795 2024-03-31 17:46 ./usr/bin/libtbx.wait_for_file -rwxr-xr-x root/root 3759 2024-03-31 17:46 ./usr/bin/mmtbx.afitt -rwxr-xr-x root/root 3771 2024-03-31 17:46 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./usr/bin/mmtbx.distance_difference -rwxr-xr-x root/root 3795 2024-03-31 17:46 ./usr/bin/mmtbx.emringer_score -rwxr-xr-x root/root 3827 2024-03-31 17:46 ./usr/bin/mmtbx.estimate_bijvoet_ratio -rwxr-xr-x root/root 3807 2024-03-31 17:46 ./usr/bin/mmtbx.extend_sidechains -rwxr-xr-x root/root 3763 2024-03-31 17:46 ./usr/bin/mmtbx.fft -rwxr-xr-x root/root 3803 2024-03-31 17:46 ./usr/bin/mmtbx.find_peaks_holes -rwxr-xr-x root/root 3815 2024-03-31 17:46 ./usr/bin/mmtbx.find_residue_in_pdb -rwxr-xr-x root/root 3807 2024-03-31 17:46 ./usr/bin/mmtbx.fix_rama_outliers -rwxr-xr-x root/root 3819 2024-03-31 17:46 ./usr/bin/mmtbx.fix_rotamer_outliers -rwxr-xr-x root/root 3771 2024-03-31 17:46 ./usr/bin/mmtbx.flipbase -rwxr-xr-x root/root 3791 2024-03-31 17:46 ./usr/bin/mmtbx.fmodel_simple -rwxr-xr-x root/root 3819 2024-03-31 17:46 ./usr/bin/mmtbx.get_related_ensemble -rwxr-xr-x root/root 3783 2024-03-31 17:46 ./usr/bin/mmtbx.hydrogenate -rwxr-xr-x root/root 3787 2024-03-31 17:46 ./usr/bin/mmtbx.massage_data -rwxr-xr-x root/root 3771 2024-03-31 17:46 ./usr/bin/mmtbx.matthews -rwxr-xr-x root/root 3791 2024-03-31 17:46 ./usr/bin/mmtbx.model_vs_data -rwxr-xr-x root/root 3807 2024-03-31 17:46 ./usr/bin/mmtbx.model_vs_sequence -rwxr-xr-x root/root 3811 2024-03-31 17:46 ./usr/bin/mmtbx.mon_lib_cif_triage -rwxr-xr-x root/root 3855 2024-03-31 17:46 ./usr/bin/mmtbx.monomer_library.comp_as_motif -rwxr-xr-x root/root 3763 2024-03-31 17:46 ./usr/bin/mmtbx.mp_geo -rwxr-xr-x root/root 3811 2024-03-31 17:46 ./usr/bin/mmtbx.nonbonded_overlaps -rwxr-xr-x root/root 3803 2024-03-31 17:46 ./usr/bin/mmtbx.partial_omit_map -rwxr-xr-x root/root 3811 2024-03-31 17:46 ./usr/bin/mmtbx.pdb_interpretation -rwxr-xr-x root/root 3862 2024-03-31 17:46 ./usr/bin/mmtbx.pdb_statistics -rwxr-xr-x root/root 3854 2024-03-31 17:46 ./usr/bin/mmtbx.pdb_view_ad_hoc -rwxr-xr-x root/root 3827 2024-03-31 17:46 ./usr/bin/mmtbx.prepare_pdb_deposition -rwxr-xr-x root/root 3763 2024-03-31 17:46 ./usr/bin/mmtbx.probe2 -rwxr-xr-x root/root 3831 2024-03-31 17:46 ./usr/bin/mmtbx.process_predicted_model -rwxr-xr-x root/root 3783 2024-03-31 17:46 ./usr/bin/mmtbx.prune_model -rwxr-xr-x root/root 3259 2024-03-31 17:46 ./usr/bin/mmtbx.python -rwxr-xr-x root/root 3807 2024-03-31 17:46 ./usr/bin/mmtbx.quantum_interface -rwxr-xr-x root/root 3763 2024-03-31 17:46 ./usr/bin/mmtbx.rama_z -rwxr-xr-x root/root 3819 2024-03-31 17:46 ./usr/bin/mmtbx.rebuild_cablam_cache -rwxr-xr-x root/root 3827 2024-03-31 17:46 ./usr/bin/mmtbx.rebuild_rotarama_cache -rwxr-xr-x root/root 3767 2024-03-31 17:46 ./usr/bin/mmtbx.reduce2 -rwxr-xr-x root/root 3855 2024-03-31 17:46 ./usr/bin/mmtbx.refine_anomalous_substructure -rwxr-xr-x root/root 3799 2024-03-31 17:46 ./usr/bin/mmtbx.rigid_bond_test -rwxr-xr-x root/root 3818 2024-03-31 17:46 ./usr/bin/mmtbx.ringer -rwxr-xr-x root/root 3815 2024-03-31 17:46 ./usr/bin/mmtbx.search_pdb_symmetry -rwxr-xr-x root/root 3843 2024-03-31 17:46 ./usr/bin/mmtbx.select_best_starting_model -rwxr-xr-x root/root 3802 2024-03-31 17:46 ./usr/bin/mmtbx.show_build_path -rwxr-xr-x root/root 3802 2024-03-31 17:46 ./usr/bin/mmtbx.show_dist_paths -rwxr-xr-x root/root 3831 2024-03-31 17:46 ./usr/bin/mmtbx.show_r_factors_by_shell -rwxr-xr-x root/root 3835 2024-03-31 17:46 ./usr/bin/mmtbx.show_suspicious_residues -rwxr-xr-x root/root 3823 2024-03-31 17:46 ./usr/bin/mmtbx.simulate_low_res_data -rwxr-xr-x root/root 3799 2024-03-31 17:46 ./usr/bin/mmtbx.ss_idealization -rwxr-xr-x root/root 3815 2024-03-31 17:46 ./usr/bin/mmtbx.ssm_rmsd_for_chains -rwxr-xr-x root/root 3783 2024-03-31 17:46 ./usr/bin/mmtbx.strip_model -rwxr-xr-x root/root 3759 2024-03-31 17:46 ./usr/bin/mmtbx.super -rwxr-xr-x root/root 3775 2024-03-31 17:46 ./usr/bin/mmtbx.superpose -rwxr-xr-x root/root 3775 2024-03-31 17:46 ./usr/bin/mmtbx.table_one -rwxr-xr-x root/root 3791 2024-03-31 17:46 ./usr/bin/mmtbx.validate_ions -rwxr-xr-x root/root 3803 2024-03-31 17:46 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./usr/bin/molprobity.kinemage -rwxr-xr-x root/root 3816 2024-03-31 17:46 ./usr/bin/molprobity.molprobity -rwxr-xr-x root/root 3812 2024-03-31 17:46 ./usr/bin/molprobity.mp_validate_bonds -rwxr-xr-x root/root 3780 2024-03-31 17:46 ./usr/bin/molprobity.omegalyze -rwxr-xr-x root/root 3812 2024-03-31 17:46 ./usr/bin/molprobity.probescore_ligand -rwxr-xr-x root/root 3808 2024-03-31 17:46 ./usr/bin/molprobity.ramalyze -rwxr-xr-x root/root 3792 2024-03-31 17:46 ./usr/bin/molprobity.rna_validate -rwxr-xr-x root/root 3816 2024-03-31 17:46 ./usr/bin/molprobity.rna_validate_bonds -rwxr-xr-x root/root 3824 2024-03-31 17:46 ./usr/bin/molprobity.rna_validate_puckers -rwxr-xr-x root/root 3820 2024-03-31 17:46 ./usr/bin/molprobity.rna_validate_suites -rwxr-xr-x root/root 3808 2024-03-31 17:46 ./usr/bin/molprobity.rotalyze -rwxr-xr-x root/root 3780 2024-03-31 17:46 ./usr/bin/molprobity.suitename -rwxr-xr-x root/root 3796 2024-03-31 17:46 ./usr/bin/molprobity.suitename_old -rwxr-xr-x root/root 3819 2024-03-31 17:46 ./usr/bin/molprobity.undowser_validation -rwxr-xr-x root/root 3260 2024-03-31 17:46 ./usr/bin/omptbx.python -rwxr-xr-x root/root 3803 2024-03-31 17:46 ./usr/bin/omptbx.show_build_path -rwxr-xr-x root/root 3803 2024-03-31 17:46 ./usr/bin/omptbx.show_dist_paths -rwxr-xr-x root/root 3782 2024-03-31 17:46 ./usr/bin/phasertng.HKLviewer -rwxr-xr-x root/root 3771 2024-03-31 17:46 ./usr/bin/phenix.HKLinfo -rwxr-xr-x root/root 3779 2024-03-31 17:46 ./usr/bin/phenix.HKLviewer -rwxr-xr-x root/root 3760 2024-03-31 17:46 ./usr/bin/phenix.angle -rwxr-xr-x root/root 3788 2024-03-31 17:46 ./usr/bin/phenix.auto_sharpen -rwxr-xr-x root/root 3820 2024-03-31 17:46 ./usr/bin/phenix.barbed_wire_analysis -rwxr-xr-x root/root 3796 2024-03-31 17:46 ./usr/bin/phenix.cablam -rwxr-xr-x root/root 3816 2024-03-31 17:46 ./usr/bin/phenix.cablam_idealization -rwxr-xr-x root/root 3800 2024-03-31 17:46 ./usr/bin/phenix.cablam_training -rwxr-xr-x root/root 3800 2024-03-31 17:46 ./usr/bin/phenix.cablam_validate -rwxr-xr-x root/root 3804 2024-03-31 17:46 ./usr/bin/phenix.cbetadev -rwxr-xr-x root/root 3768 2024-03-31 17:46 ./usr/bin/phenix.cc_star -rwxr-xr-x root/root 3804 2024-03-31 17:46 ./usr/bin/phenix.chains_as_models -rwxr-xr-x root/root 3840 2024-03-31 17:46 ./usr/bin/phenix.chiral_validation -rwxr-xr-x root/root 3780 2024-03-31 17:46 ./usr/bin/phenix.cif_as_mtz -rwxr-xr-x root/root 3780 2024-03-31 17:46 ./usr/bin/phenix.cif_as_pdb -rwxr-xr-x root/root 3812 2024-03-31 17:46 ./usr/bin/phenix.clashscore -rwxr-xr-x root/root 3780 2024-03-31 17:46 ./usr/bin/phenix.cns_as_mtz -rwxr-xr-x root/root 3776 2024-03-31 17:46 ./usr/bin/phenix.comparama -rwxr-xr-x root/root 3874 2024-03-31 17:46 ./usr/bin/phenix.compare_datasets -rwxr-xr-x root/root 3780 2024-03-31 17:46 ./usr/bin/phenix.csv_as_mtz -rwxr-xr-x root/root 3842 2024-03-31 17:46 ./usr/bin/phenix.data_viewer -rwxr-xr-x root/root 3768 2024-03-31 17:46 ./usr/bin/phenix.diffuse -rwxr-xr-x root/root 3772 2024-03-31 17:46 ./usr/bin/phenix.dynamics -rwxr-xr-x root/root 3756 2024-03-31 17:46 ./usr/bin/phenix.emma -rwxr-xr-x root/root 3829 2024-03-31 17:46 ./usr/bin/phenix.emringer -rwxr-xr-x root/root 3776 2024-03-31 17:46 ./usr/bin/phenix.evalurama -rwxr-xr-x root/root 3863 2024-03-31 17:46 ./usr/bin/phenix.example_viewer -rwxr-xr-x root/root 3832 2024-03-31 17:46 ./usr/bin/phenix.explore_metric_symmetry -rwxr-xr-x root/root 3756 2024-03-31 17:46 ./usr/bin/phenix.f000 -rwxr-xr-x root/root 3800 2024-03-31 17:46 ./usr/bin/phenix.fab_elbow_angle -rwxr-xr-x root/root 3780 2024-03-31 17:46 ./usr/bin/phenix.fake_f_obs -rwxr-xr-x root/root 3805 2024-03-31 17:46 ./usr/bin/phenix.feature_enhanced_map -rwxr-xr-x root/root 3788 2024-03-31 17:46 ./usr/bin/phenix.fem -rwxr-xr-x root/root 3756 2024-03-31 17:46 ./usr/bin/phenix.fest -rwxr-xr-x root/root 3776 2024-03-31 17:46 ./usr/bin/phenix.fetch_pdb -rwxr-xr-x root/root 3764 2024-03-31 17:46 ./usr/bin/phenix.fft -rwxr-xr-x root/root 3804 2024-03-31 17:46 ./usr/bin/phenix.find_peaks_holes -rwxr-xr-x root/root 3836 2024-03-31 17:46 ./usr/bin/phenix.find_reticular_twin_laws -rwxr-xr-x root/root 3800 2024-03-31 17:46 ./usr/bin/phenix.find_tls_groups -rwxr-xr-x root/root 3764 2024-03-31 17:46 ./usr/bin/phenix.fmodel -rwxr-xr-x root/root 3816 2024-03-31 17:46 ./usr/bin/phenix.fobs_minus_fobs_map -rwxr-xr-x root/root 3808 2024-03-31 17:46 ./usr/bin/phenix.form_factor_query -rwxr-xr-x root/root 3792 2024-03-31 17:46 ./usr/bin/phenix.french_wilson -rwxr-xr-x root/root 3824 2024-03-31 17:46 ./usr/bin/phenix.geometry_minimization -rwxr-xr-x root/root 3788 2024-03-31 17:46 ./usr/bin/phenix.grow_density -rwxr-xr-x root/root 3760 2024-03-31 17:46 ./usr/bin/phenix.hbond -rwxr-xr-x root/root 3856 2024-03-31 17:46 ./usr/bin/phenix.helix_sheet_recs_as_pdb_files -rwxr-xr-x root/root 3837 2024-03-31 17:46 ./usr/bin/phenix.image_viewer -rwxr-xr-x root/root 3772 2024-03-31 17:46 ./usr/bin/phenix.kinemage -rwxr-xr-x root/root 3768 2024-03-31 17:46 ./usr/bin/phenix.map_box -rwxr-xr-x root/root 3796 2024-03-31 17:46 ./usr/bin/phenix.map_comparison -rwxr-xr-x root/root 3828 2024-03-31 17:46 ./usr/bin/phenix.map_to_model_histogram -rwxr-xr-x root/root 3836 2024-03-31 17:46 ./usr/bin/phenix.map_to_structure_factors -rwxr-xr-x root/root 3756 2024-03-31 17:46 ./usr/bin/phenix.maps -rwxr-xr-x root/root 3756 2024-03-31 17:46 ./usr/bin/phenix.mask -rwxr-xr-x root/root 3816 2024-03-31 17:46 ./usr/bin/phenix.maximum_entropy_map -rwxr-xr-x root/root 3812 2024-03-31 17:46 ./usr/bin/phenix.merging_statistics -rwxr-xr-x root/root 3812 2024-03-31 17:46 ./usr/bin/phenix.model_idealization -rwxr-xr-x root/root 3776 2024-03-31 17:46 ./usr/bin/phenix.model_map -rwxr-xr-x root/root 3824 2024-03-31 17:46 ./usr/bin/phenix.model_model_distances -rwxr-xr-x root/root 3788 2024-03-31 17:46 ./usr/bin/phenix.model_vs_map -rwxr-xr-x root/root 3808 2024-03-31 17:46 ./usr/bin/phenix.model_vs_sequence -rwxr-xr-x root/root 3804 2024-03-31 17:46 ./usr/bin/phenix.models_as_chains -rwxr-xr-x root/root 3812 2024-03-31 17:46 ./usr/bin/phenix.molprobity -rwxr-xr-x root/root 3808 2024-03-31 17:46 ./usr/bin/phenix.mp_validate_bonds -rwxr-xr-x root/root 3772 2024-03-31 17:46 ./usr/bin/phenix.mtz.dump -rwxr-xr-x root/root 3768 2024-03-31 17:46 ./usr/bin/phenix.mtz2map -rwxr-xr-x root/root 3780 2024-03-31 17:46 ./usr/bin/phenix.mtz_as_cif -rwxr-xr-x root/root 3776 2024-03-31 17:46 ./usr/bin/phenix.omegalyze -rwxr-xr-x root/root 3812 2024-03-31 17:46 ./usr/bin/phenix.pdb.b_factor_stats -rwxr-xr-x root/root 3824 2024-03-31 17:46 ./usr/bin/phenix.pdb.biomt_reconstruction -rwxr-xr-x root/root 3792 2024-03-31 17:46 ./usr/bin/phenix.pdb.hierarchy -rwxr-xr-x root/root 3824 2024-03-31 17:46 ./usr/bin/phenix.pdb.mtrix_reconstruction -rwxr-xr-x root/root 3780 2024-03-31 17:46 ./usr/bin/phenix.pdb_as_cif -rwxr-xr-x root/root 3812 2024-03-31 17:46 ./usr/bin/phenix.pdb_atom_selection -rwxr-xr-x root/root 3847 2024-03-31 17:46 ./usr/bin/phenix.pdb_editor -rwxr-xr-x root/root 3812 2024-03-31 17:46 ./usr/bin/phenix.pdb_interpretation -rwxr-xr-x root/root 3772 2024-03-31 17:46 ./usr/bin/phenix.pdbtools -rwxr-xr-x root/root 3768 2024-03-31 17:46 ./usr/bin/phenix.perigee -rwxr-xr-x root/root 3816 2024-03-31 17:46 ./usr/bin/phenix.plan_sad_experiment -rwxr-xr-x root/root 3764 2024-03-31 17:46 ./usr/bin/phenix.polder -rwxr-xr-x root/root 3832 2024-03-31 17:46 ./usr/bin/phenix.process_predicted_model -rwxr-xr-x root/root 3816 2024-03-31 17:46 ./usr/bin/phenix.r_factor_statistics -rwxr-xr-x root/root 3764 2024-03-31 17:46 ./usr/bin/phenix.rama_z -rwxr-xr-x root/root 3804 2024-03-31 17:46 ./usr/bin/phenix.ramalyze -rwxr-xr-x root/root 3796 2024-03-31 17:46 ./usr/bin/phenix.rank_scale_map -rwxr-xr-x root/root 3828 2024-03-31 17:46 ./usr/bin/phenix.real_space_correlation -rwxr-xr-x root/root 3816 2024-03-31 17:46 ./usr/bin/phenix.real_space_diff_map -rwxr-xr-x root/root 3832 2024-03-31 17:46 ./usr/bin/phenix.reciprocal_space_arrays -rwxr-xr-x root/root 3840 2024-03-31 17:46 ./usr/bin/phenix.reflection_file_converter -rwxr-xr-x root/root 3824 2024-03-31 17:46 ./usr/bin/phenix.reflection_statistics -rwxr-xr-x root/root 3768 2024-03-31 17:46 ./usr/bin/phenix.reindex -rwxr-xr-x root/root 3800 2024-03-31 17:46 ./usr/bin/phenix.remove_outliers -rwxr-xr-x root/root 3810 2024-03-31 17:46 ./usr/bin/phenix.resolution -rwxr-xr-x root/root 3788 2024-03-31 17:46 ./usr/bin/phenix.rna_validate -rwxr-xr-x root/root 3812 2024-03-31 17:46 ./usr/bin/phenix.rna_validate_bonds -rwxr-xr-x root/root 3820 2024-03-31 17:46 ./usr/bin/phenix.rna_validate_puckers -rwxr-xr-x root/root 3816 2024-03-31 17:46 ./usr/bin/phenix.rna_validate_suites -rwxr-xr-x root/root 3804 2024-03-31 17:46 ./usr/bin/phenix.rotalyze -rwxr-xr-x root/root 3860 2024-03-31 17:46 ./usr/bin/phenix.secondary_structure_restraints -rwxr-xr-x root/root 3860 2024-03-31 17:46 ./usr/bin/phenix.secondary_structure_validation -rwxr-xr-x root/root 3824 2024-03-31 17:46 ./usr/bin/phenix.segment_and_split_map -rwxr-xr-x root/root 3756 2024-03-31 17:46 ./usr/bin/phenix.sisa -rwxr-xr-x root/root 3788 2024-03-31 17:46 ./usr/bin/phenix.sort_hetatms -rwxr-xr-x root/root 3776 2024-03-31 17:46 ./usr/bin/phenix.suitename -rwxr-xr-x root/root 3792 2024-03-31 17:46 ./usr/bin/phenix.suitename_old -rwxr-xr-x root/root 3752 2024-03-31 17:46 ./usr/bin/phenix.tls -rwxr-xr-x root/root 3788 2024-03-31 17:46 ./usr/bin/phenix.tls_analysis -rwxr-xr-x root/root 3780 2024-03-31 17:46 ./usr/bin/phenix.tls_as_xyz -rwxr-xr-x root/root 3815 2024-03-31 17:46 ./usr/bin/phenix.undowser_validation -rwxr-xr-x root/root 3808 2024-03-31 17:46 ./usr/bin/phenix.unique_with_biomt -rwxr-xr-x root/root 3801 2024-03-31 17:46 ./usr/bin/phenix.validate_H -rwxr-xr-x root/root 3764 2024-03-31 17:46 ./usr/bin/phenix.xmanip -rwxr-xr-x root/root 3768 2024-03-31 17:46 ./usr/bin/phenix.xtriage -rwxr-xr-x root/root 3814 2024-03-31 17:46 ./usr/bin/rstbx.index -rwxr-xr-x root/root 3259 2024-03-31 17:46 ./usr/bin/rstbx.python -rwxr-xr-x root/root 3802 2024-03-31 17:46 ./usr/bin/rstbx.show_build_path -rwxr-xr-x root/root 3802 2024-03-31 17:46 ./usr/bin/rstbx.show_dist_paths -rwxr-xr-x root/root 3791 2024-03-31 17:46 ./usr/bin/rstbx.simage.create -rwxr-xr-x root/root 3902 2024-03-31 17:46 ./usr/bin/rstbx.simage.explore_completeness -rwxr-xr-x root/root 3791 2024-03-31 17:46 ./usr/bin/rstbx.simage.solver -rwxr-xr-x root/root 3862 2024-03-31 17:46 ./usr/bin/rstbx.simage.wx_display -rwxr-xr-x root/root 3777 2024-03-31 17:46 ./usr/bin/samosa.join -rwxr-xr-x root/root 3781 2024-03-31 17:46 ./usr/bin/samosa.scale -rwxr-xr-x root/root 3823 2024-03-31 17:46 ./usr/bin/scitbx.apply_tapenade_hints -rwxr-xr-x root/root 3807 2024-03-31 17:46 ./usr/bin/scitbx.generate_error_h -rwxr-xr-x root/root 3779 2024-03-31 17:46 ./usr/bin/scitbx.histogram -rwxr-xr-x root/root 3260 2024-03-31 17:46 ./usr/bin/scitbx.python -rwxr-xr-x root/root 3803 2024-03-31 17:46 ./usr/bin/scitbx.show_build_path -rwxr-xr-x root/root 3803 2024-03-31 17:46 ./usr/bin/scitbx.show_dist_paths -rwxr-xr-x root/root 3799 2024-03-31 17:46 ./usr/bin/scitbx.show_exp_times -rwxr-xr-x root/root 3783 2024-03-31 17:46 ./usr/bin/scitbx.show_sizes -rwxr-xr-x root/root 3807 2024-03-31 17:46 ./usr/bin/scitbx.unicode_examples -rwxr-xr-x root/root 3263 2024-03-31 17:46 ./usr/bin/serialtbx.python -rwxr-xr-x root/root 3806 2024-03-31 17:46 ./usr/bin/serialtbx.show_build_path -rwxr-xr-x root/root 3806 2024-03-31 17:46 ./usr/bin/serialtbx.show_dist_paths -rwxr-xr-x root/root 3811 2024-03-31 17:46 ./usr/bin/smtbx.absolute_structure -rwxr-xr-x root/root 3783 2024-03-31 17:46 ./usr/bin/smtbx.anom_refine -rwxr-xr-x root/root 3819 2024-03-31 17:46 ./usr/bin/smtbx.benchmark_refinement -rwxr-xr-x root/root 3759 2024-03-31 17:46 ./usr/bin/smtbx.masks -rwxr-xr-x root/root 3259 2024-03-31 17:46 ./usr/bin/smtbx.python -rwxr-xr-x root/root 3763 2024-03-31 17:46 ./usr/bin/smtbx.refine -rwxr-xr-x root/root 3802 2024-03-31 17:46 ./usr/bin/smtbx.show_build_path -rwxr-xr-x root/root 3802 2024-03-31 17:46 ./usr/bin/smtbx.show_dist_paths -rwxr-xr-x root/root 3784 2024-03-31 17:46 ./usr/bin/sphinx.build -rwxr-xr-x root/root 3264 2024-03-31 17:46 ./usr/bin/spotfinder.python -rwxr-xr-x root/root 3807 2024-03-31 17:46 ./usr/bin/spotfinder.show_build_path -rwxr-xr-x root/root 3807 2024-03-31 17:46 ./usr/bin/spotfinder.show_dist_paths -rwxr-xr-x root/root 3930 2024-03-31 17:46 ./usr/bin/wxtbx.anomalous_differences_histogram -rwxr-xr-x root/root 3886 2024-03-31 17:46 ./usr/bin/wxtbx.inspect_r_free_flags -rwxr-xr-x root/root 3847 2024-03-31 17:46 ./usr/bin/wxtbx.plan_sad_experiment -rwxr-xr-x root/root 3259 2024-03-31 17:46 ./usr/bin/wxtbx.python -rwxr-xr-x root/root 3802 2024-03-31 17:46 ./usr/bin/wxtbx.show_build_path -rwxr-xr-x root/root 3802 2024-03-31 17:46 ./usr/bin/wxtbx.show_dist_paths -rwxr-xr-x root/root 3862 2024-03-31 17:46 ./usr/bin/wxtbx.show_file_info -rwxr-xr-x root/root 3799 2024-03-31 17:46 ./usr/bin/wxtbx.xtriage drwxr-xr-x root/root 0 2024-03-31 17:46 ./usr/lib/ drwxr-xr-x root/root 0 2024-03-31 17:46 ./usr/lib/cctbx/ drwxr-xr-x root/root 0 2024-03-31 17:46 ./usr/lib/cctbx/python3.12/ drwxr-xr-x root/root 0 2024-03-31 17:46 ./usr/lib/cctbx/python3.12/boost_adaptbx/ drwxr-xr-x root/root 0 2024-03-31 17:46 ./usr/lib/cctbx/python3.12/boost_adaptbx/tests/ -rwxr-xr-x root/root 26800 2024-03-31 17:46 ./usr/lib/cctbx/python3.12/boost_adaptbx/tests/tst_optional_copy drwxr-xr-x root/root 0 2024-03-31 17:46 ./usr/lib/cctbx/python3.12/iotbx/ drwxr-xr-x root/root 0 2024-03-31 17:46 ./usr/lib/cctbx/python3.12/iotbx/pdb/ -rwxr-xr-x root/root 88344 2024-03-31 17:46 ./usr/lib/cctbx/python3.12/iotbx/pdb/hybrid_36_fem -rw-r--r-- root/root 121217 2024-03-31 17:46 ./usr/lib/cctbx/python3.12/libtbx_env drwxr-xr-x root/root 0 2024-03-31 17:46 ./usr/lib/cctbx/python3.12/scitbx/ drwxr-xr-x root/root 0 2024-03-31 17:46 ./usr/lib/cctbx/python3.12/scitbx/array_family/ -rwxr-xr-x root/root 96520 2024-03-31 17:46 ./usr/lib/cctbx/python3.12/scitbx/array_family/tst_accessors -rwxr-xr-x root/root 157960 2024-03-31 17:46 ./usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_1 -rwxr-xr-x root/root 43272 2024-03-31 17:46 ./usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_2 -rwxr-xr-x root/root 67848 2024-03-31 17:46 ./usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_3 -rwxr-xr-x root/root 579848 2024-03-31 17:46 ./usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_4 -rwxr-xr-x root/root 63752 2024-03-31 17:46 ./usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_5 -rwxr-xr-x root/root 59656 2024-03-31 17:46 ./usr/lib/cctbx/python3.12/scitbx/array_family/tst_mat3 -rwxr-xr-x root/root 59656 2024-03-31 17:46 ./usr/lib/cctbx/python3.12/scitbx/array_family/tst_optional_copy -rwxr-xr-x root/root 22792 2024-03-31 17:46 ./usr/lib/cctbx/python3.12/scitbx/array_family/tst_rectangular_full_packed -rwxr-xr-x root/root 39176 2024-03-31 17:46 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./usr/share/lintian/overrides/ -rw-r--r-- root/root 1 2024-02-28 12:45 ./usr/share/lintian/overrides/python3-cctbx +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: s390x Build Type: any Build-Space: 7964192 Build-Time: 2296 Distribution: noble-proposed Host Architecture: s390x Install-Time: 127 Job: cctbx_2023.12+ds2+~3.17.0+ds1-4build2.dsc Machine Architecture: s390x Package: cctbx Package-Time: 2427 Source-Version: 2023.12+ds2+~3.17.0+ds1-4build2 Space: 7964192 Status: successful Version: 2023.12+ds2+~3.17.0+ds1-4build2 -------------------------------------------------------------------------------- Finished at 2024-04-01T03:59:52Z Build needed 00:40:27, 7964192k disk space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=noble --arch=s390x PACKAGEBUILD-27987401 Scanning for processes to kill in build PACKAGEBUILD-27987401