Ubuntu
covtobed package

covtobed 1.3.5+dfsg-2build1 source package in Ubuntu

Changelog

covtobed (1.3.5+dfsg-2build1) resolute; urgency=medium

  * Rebuild against latest bamtools

 -- Jeremy Bícha <email address hidden>  Sat, 01 Nov 2025 14:45:28 -0400

Upload details

Uploaded by:
Jeremy Bícha
Uploaded to:
Resolute
Original maintainer:
Debian Med
Architectures:
any all
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Resolute release universe misc

Downloads

File Size SHA-256 Checksum
covtobed_1.3.5+dfsg.orig.tar.xz 33.6 MiB df1af8451cd9e854d254c1bbb0fe6b15569f22721e39f05aa4fdf33045a722a3
covtobed_1.3.5+dfsg-2build1.debian.tar.xz 6.3 KiB 8756b67134b410a1e6e59b82c31fd478252d20e365c831f4b960868fc892024d
covtobed_1.3.5+dfsg-2build1.dsc 2.1 KiB df375bb7d0b1edcf0417ac7ff3efa22b0668f288ae52ff3354f481f81e09b77e

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Binary packages built by this source

covtobed: convert the coverage track from a BAM file into a BED file

 Reads one (or more) alignment files (sorted BAM) and prints a BED with
 the coverage. It will join consecutive bases with the same coverage, and
 can be used to only print a BED file with the regions having a specific
 coverage range.

covtobed-dbgsym: debug symbols for covtobed
covtobed-examples: example data and scripts for mindthegap

 Reads one (or more) alignment files (sorted BAM) and prints a BED with
 the coverage. It will join consecutive bases with the same coverage, and
 can be used to only print a BED file with the regions having a specific
 coverage range.
 .
 This package is meant to accommodate covtobed.