crac 2.5.0+dfsg-3 source package in Ubuntu


crac (2.5.0+dfsg-3) unstable; urgency=low

  [ Steffen Moeller ]
  * debian/upstream/metadata: RRID -> SciCrunch

  [ Andreas Tille ]
  * debhelper 11
  * Point Vcs fields to
  * Standards-Version: 4.2.1
  * Do not run build time tests in parallel since the sequence is important
  * Add autopkgtest

 -- Andreas Tille <email address hidden>  Thu, 13 Sep 2018 14:06:30 +0200

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Uploaded by:
Debian Med on 2018-09-13
Uploaded to:
Original maintainer:
Debian Med
Low Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Disco release on 2018-11-09 universe misc


File Size SHA-256 Checksum
crac_2.5.0+dfsg-3.dsc 2.0 KiB af7fe8665ab34e01436816219338cde92ef1a1eb24a69b91a1ce579a66fc74a9
crac_2.5.0+dfsg.orig.tar.xz 453.9 KiB 14ff88bcc3659b10a60737480a2387d9d72cdfe5841cafb430b4db9ab3770324
crac_2.5.0+dfsg-3.debian.tar.xz 12.5 KiB 03362eed46919730c61a8460176ee7582d74a9a3ada80295e5da95850417d6fc

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Binary packages built by this source

crac: integrated RNA-Seq read analysis

 CRAC is a tool to analyze High Throughput Sequencing (HTS) data in
 comparison to a reference genome. It is intended for transcriptomic
 and genomic sequencing reads. More precisely, with transcriptomic
 reads as input, it predicts point mutations, indels, splice junction,
 and chimeric RNAs (ie, non colinear splice junctions). CRAC can also
 output positions and nature of sequence error that it detects in the
 reads. CRAC uses a genome index. This index must be computed before
 running the read analysis. For this sake, use the command "crac-index"
 on your genome files. You can then process the reads using the command
 crac. See the man page of CRAC (help file) by typing "man crac". CRAC
 requires large amount of main memory on your computer. For processing
 against the Human genome, say 50 million reads of 100 nucleotide each,
 CRAC requires about 40 gigabytes of main memory. Check whether the
 system of your computing server is equipped with sufficient amount of
 memory before launching an analysis.

crac-dbgsym: debug symbols for crac