https://launchpad.net/ubuntu/+source/dcmstack/0.8-3/+build/22405151 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux lgw01-amd64-011 4.15.0-162-generic #170-Ubuntu SMP Mon Oct 18 11:38:05 UTC 2021 x86_64 Buildd toolchain package versions: launchpad-buildd_204~508~ubuntu18.04.1 python3-lpbuildd_204~508~ubuntu18.04.1 sbuild_0.75.0-1ubuntu1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu16.04.1 bzr_2.7.0+bzr6622-10 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu18.04.1 git_1:2.17.1-1ubuntu0.9 dpkg-dev_1.19.0.5ubuntu2.3 python-debian_0.1.32 python3-debian_0.1.32. Syncing the system clock with the buildd NTP service... 12 Nov 23:16:53 ntpdate[1759]: adjust time server 10.211.37.1 offset 0.000270 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=jammy --arch=amd64 PACKAGEBUILD-22405151 --image-type chroot /home/buildd/filecache-default/b0c128df17a460089eca69348f06144377489985 Creating target for build PACKAGEBUILD-22405151 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=jammy --arch=amd64 PACKAGEBUILD-22405151 Starting target for build PACKAGEBUILD-22405151 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=jammy --arch=amd64 PACKAGEBUILD-22405151 'deb http://ftpmaster.internal/ubuntu jammy main universe' 'deb http://ftpmaster.internal/ubuntu jammy-security main universe' 'deb http://ftpmaster.internal/ubuntu jammy-updates main universe' 'deb http://ftpmaster.internal/ubuntu jammy-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-22405151 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=jammy --arch=amd64 PACKAGEBUILD-22405151 Updating target for build PACKAGEBUILD-22405151 Get:1 http://ftpmaster.internal/ubuntu jammy InRelease [270 kB] Get:2 http://ftpmaster.internal/ubuntu jammy-security InRelease [90.7 kB] Get:3 http://ftpmaster.internal/ubuntu jammy-updates InRelease [90.7 kB] Get:4 http://ftpmaster.internal/ubuntu jammy-proposed InRelease [121 kB] Get:5 http://ftpmaster.internal/ubuntu jammy/main amd64 Packages [1397 kB] Get:6 http://ftpmaster.internal/ubuntu jammy/main Translation-en [512 kB] Get:7 http://ftpmaster.internal/ubuntu jammy/universe amd64 Packages [13.2 MB] Get:8 http://ftpmaster.internal/ubuntu jammy/universe Translation-en [5532 kB] Get:9 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 Packages [186 kB] Get:10 http://ftpmaster.internal/ubuntu jammy-proposed/main Translation-en [58.1 kB] Get:11 http://ftpmaster.internal/ubuntu jammy-proposed/universe amd64 Packages [846 kB] Get:12 http://ftpmaster.internal/ubuntu jammy-proposed/universe Translation-en [394 kB] Fetched 22.7 MB in 5s (4208 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: apt base-files bsdutils ca-certificates cpp-11 dash debconf debianutils e2fsprogs g++-11 gcc-11 gcc-11-base gpg gpg-agent gpgconf gpgv grep libapparmor1 libapt-pkg6.0 libasan6 libatomic1 libattr1 libblkid1 libcc1-0 libcom-err2 libcrypt-dev libcrypt1 libext2fs2 libgcc-11-dev libgcc-s1 libgcrypt20 libgdbm-compat4 libgdbm6 libgnutls30 libgomp1 libgpg-error0 libgssapi-krb5-2 libidn2-0 libisl23 libitm1 libk5crypto3 libkrb5-3 libkrb5support0 liblsan0 libmount1 libmpc3 libncurses6 libncursesw6 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libquadmath0 libseccomp2 libselinux1 libsmartcols1 libsqlite3-0 libss2 libstdc++-11-dev libstdc++6 libtasn1-6 libtinfo6 libtsan0 libubsan1 libuuid1 libzstd1 lockfile-progs logsave make mount ncurses-base ncurses-bin pkgbinarymangler sed sensible-utils tzdata usrmerge util-linux 79 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 191 MB of archives. After this operation, 1074 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu jammy/main amd64 debconf all 1.5.79 [126 kB] Get:2 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libpam0g amd64 1.4.0-10ubuntu1 [61.4 kB] Get:3 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libcrypt-dev amd64 1:4.4.26-1 [112 kB] Get:4 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libcrypt1 amd64 1:4.4.26-1 [82.1 kB] Get:5 http://ftpmaster.internal/ubuntu jammy/main amd64 base-files amd64 12ubuntu2 [63.3 kB] Get:6 http://ftpmaster.internal/ubuntu jammy/main amd64 bsdutils amd64 1:2.37.2-4ubuntu1 [80.9 kB] Get:7 http://ftpmaster.internal/ubuntu jammy/main amd64 debianutils amd64 5.5-1 [77.5 kB] Get:8 http://ftpmaster.internal/ubuntu jammy/main amd64 dash amd64 0.5.11+git20210903+057cd650a4ed-3 [91.8 kB] Get:9 http://ftpmaster.internal/ubuntu jammy/main amd64 grep amd64 3.7-1 [156 kB] Get:10 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libncursesw6 amd64 6.2+20210905-1 [147 kB] Get:11 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libncurses6 amd64 6.2+20210905-1 [110 kB] Get:12 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libtinfo6 amd64 6.2+20210905-1 [104 kB] Get:13 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 ncurses-bin amd64 6.2+20210905-1 [181 kB] Get:14 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 sed amd64 4.8-1 [188 kB] Get:15 http://ftpmaster.internal/ubuntu jammy/main amd64 libblkid1 amd64 2.37.2-4ubuntu1 [103 kB] Get:16 http://ftpmaster.internal/ubuntu jammy/main amd64 libselinux1 amd64 3.1-3build3 [74.2 kB] Get:17 http://ftpmaster.internal/ubuntu jammy/main amd64 libmount1 amd64 2.37.2-4ubuntu1 [122 kB] Get:18 http://ftpmaster.internal/ubuntu jammy/main amd64 util-linux amd64 2.37.2-4ubuntu1 [1063 kB] Get:19 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 ncurses-base all 6.2+20210905-1 [19.9 kB] Get:20 http://ftpmaster.internal/ubuntu jammy/main amd64 libcc1-0 amd64 11.2.0-10ubuntu1 [53.9 kB] Get:21 http://ftpmaster.internal/ubuntu jammy/main amd64 gcc-11-base amd64 11.2.0-10ubuntu1 [21.0 kB] Get:22 http://ftpmaster.internal/ubuntu jammy/main amd64 libgcc-s1 amd64 11.2.0-10ubuntu1 [45.6 kB] Get:23 http://ftpmaster.internal/ubuntu jammy/main amd64 libgomp1 amd64 11.2.0-10ubuntu1 [117 kB] Get:24 http://ftpmaster.internal/ubuntu jammy/main amd64 libitm1 amd64 11.2.0-10ubuntu1 [30.0 kB] Get:25 http://ftpmaster.internal/ubuntu jammy/main amd64 libatomic1 amd64 11.2.0-10ubuntu1 [10.0 kB] Get:26 http://ftpmaster.internal/ubuntu jammy/main amd64 libasan6 amd64 11.2.0-10ubuntu1 [2282 kB] Get:27 http://ftpmaster.internal/ubuntu jammy/main amd64 liblsan0 amd64 11.2.0-10ubuntu1 [976 kB] Get:28 http://ftpmaster.internal/ubuntu jammy/main amd64 libtsan0 amd64 11.2.0-10ubuntu1 [2260 kB] Get:29 http://ftpmaster.internal/ubuntu jammy/main amd64 libubsan1 amd64 11.2.0-10ubuntu1 [921 kB] Get:30 http://ftpmaster.internal/ubuntu jammy/main amd64 libquadmath0 amd64 11.2.0-10ubuntu1 [154 kB] Get:31 http://ftpmaster.internal/ubuntu jammy/main amd64 g++-11 amd64 11.2.0-10ubuntu1 [55.5 MB] Get:32 http://ftpmaster.internal/ubuntu jammy/main amd64 libstdc++-11-dev amd64 11.2.0-10ubuntu1 [2077 kB] Get:33 http://ftpmaster.internal/ubuntu jammy/main amd64 libgcc-11-dev amd64 11.2.0-10ubuntu1 [2532 kB] Get:34 http://ftpmaster.internal/ubuntu jammy/main amd64 gcc-11 amd64 11.2.0-10ubuntu1 [59.4 MB] Get:35 http://ftpmaster.internal/ubuntu jammy/main amd64 cpp-11 amd64 11.2.0-10ubuntu1 [50.7 MB] Get:36 http://ftpmaster.internal/ubuntu jammy/main amd64 libstdc++6 amd64 11.2.0-10ubuntu1 [654 kB] Get:37 http://ftpmaster.internal/ubuntu jammy/main amd64 libisl23 amd64 0.24-2 [728 kB] Get:38 http://ftpmaster.internal/ubuntu jammy/main amd64 libmpc3 amd64 1.2.1-1 [46.9 kB] Get:39 http://ftpmaster.internal/ubuntu jammy/main amd64 libzstd1 amd64 1.4.8+dfsg-3 [324 kB] Get:40 http://ftpmaster.internal/ubuntu jammy/main amd64 libgpg-error0 amd64 1.42-3 [68.1 kB] Get:41 http://ftpmaster.internal/ubuntu jammy/main amd64 libgcrypt20 amd64 1.9.4-3ubuntu2 [515 kB] Get:42 http://ftpmaster.internal/ubuntu jammy/main amd64 libapt-pkg6.0 amd64 2.3.11 [904 kB] Get:43 http://ftpmaster.internal/ubuntu jammy/main amd64 gpgv amd64 2.2.27-2ubuntu1 [137 kB] Get:44 http://ftpmaster.internal/ubuntu jammy/main amd64 libidn2-0 amd64 2.3.2-2 [66.5 kB] Get:45 http://ftpmaster.internal/ubuntu jammy/main amd64 libp11-kit0 amd64 0.24.0-5 [252 kB] Get:46 http://ftpmaster.internal/ubuntu jammy/main amd64 libtasn1-6 amd64 4.17.0-2 [43.2 kB] Get:47 http://ftpmaster.internal/ubuntu jammy/main amd64 libgnutls30 amd64 3.7.2-2ubuntu1 [957 kB] Get:48 http://ftpmaster.internal/ubuntu jammy/main amd64 libseccomp2 amd64 2.5.2-2ubuntu2 [48.3 kB] Get:49 http://ftpmaster.internal/ubuntu jammy/main amd64 apt amd64 2.3.11 [1391 kB] Get:50 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libpam-modules-bin amd64 1.4.0-10ubuntu1 [37.4 kB] Get:51 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libpam-modules amd64 1.4.0-10ubuntu1 [280 kB] Get:52 http://ftpmaster.internal/ubuntu jammy/main amd64 logsave amd64 1.46.4-1ubuntu1 [10.9 kB] Get:53 http://ftpmaster.internal/ubuntu jammy/main amd64 libext2fs2 amd64 1.46.4-1ubuntu1 [209 kB] Get:54 http://ftpmaster.internal/ubuntu jammy/main amd64 e2fsprogs amd64 1.46.4-1ubuntu1 [589 kB] Get:55 http://ftpmaster.internal/ubuntu jammy/main amd64 mount amd64 2.37.2-4ubuntu1 [114 kB] Get:56 http://ftpmaster.internal/ubuntu jammy/main amd64 libattr1 amd64 1:2.5.1-1 [13.3 kB] Get:57 http://ftpmaster.internal/ubuntu jammy/main amd64 libcom-err2 amd64 1.46.4-1ubuntu1 [10.1 kB] Get:58 http://ftpmaster.internal/ubuntu jammy/main amd64 libk5crypto3 amd64 1.18.3-7 [86.2 kB] Get:59 http://ftpmaster.internal/ubuntu jammy/main amd64 libkrb5support0 amd64 1.18.3-7 [32.2 kB] Get:60 http://ftpmaster.internal/ubuntu jammy/main amd64 libkrb5-3 amd64 1.18.3-7 [355 kB] Get:61 http://ftpmaster.internal/ubuntu jammy/main amd64 libgssapi-krb5-2 amd64 1.18.3-7 [143 kB] Get:62 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libpam-runtime all 1.4.0-10ubuntu1 [40.2 kB] Get:63 http://ftpmaster.internal/ubuntu jammy/main amd64 libsmartcols1 amd64 2.37.2-4ubuntu1 [50.9 kB] Get:64 http://ftpmaster.internal/ubuntu jammy/main amd64 libuuid1 amd64 2.37.2-4ubuntu1 [23.8 kB] Get:65 http://ftpmaster.internal/ubuntu jammy/main amd64 libss2 amd64 1.46.4-1ubuntu1 [12.3 kB] Get:66 http://ftpmaster.internal/ubuntu jammy/main amd64 sensible-utils all 0.0.17 [20.1 kB] Get:67 http://ftpmaster.internal/ubuntu jammy/main amd64 usrmerge all 25ubuntu2 [54.7 kB] Get:68 http://ftpmaster.internal/ubuntu jammy/main amd64 ca-certificates all 20211016 [148 kB] Get:69 http://ftpmaster.internal/ubuntu jammy/main amd64 libapparmor1 amd64 3.0.3-0ubuntu3 [37.8 kB] Get:70 http://ftpmaster.internal/ubuntu jammy/main amd64 libsqlite3-0 amd64 3.36.0-2 [641 kB] Get:71 http://ftpmaster.internal/ubuntu jammy/main amd64 tzdata all 2021e-1ubuntu1 [343 kB] Get:72 http://ftpmaster.internal/ubuntu jammy/main amd64 libgdbm6 amd64 1.22-1 [35.2 kB] Get:73 http://ftpmaster.internal/ubuntu jammy/main amd64 gpg amd64 2.2.27-2ubuntu1 [518 kB] Get:74 http://ftpmaster.internal/ubuntu jammy/main amd64 gpgconf amd64 2.2.27-2ubuntu1 [93.9 kB] Get:75 http://ftpmaster.internal/ubuntu jammy/main amd64 gpg-agent amd64 2.2.27-2ubuntu1 [209 kB] Get:76 http://ftpmaster.internal/ubuntu jammy/main amd64 libgdbm-compat4 amd64 1.22-1 [6450 B] Get:77 http://ftpmaster.internal/ubuntu jammy/main amd64 lockfile-progs amd64 0.1.19 [10.0 kB] Get:78 http://ftpmaster.internal/ubuntu jammy/main amd64 make amd64 4.3-4ubuntu2 [179 kB] Get:79 http://ftpmaster.internal/ubuntu jammy/main amd64 pkgbinarymangler all 149 [32.4 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 191 MB in 19s (9920 kB/s) (Reading database ... 13258 files and directories currently installed.) 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Setting up libapparmor1:amd64 (3.0.3-0ubuntu3) ... Setting up libsqlite3-0:amd64 (3.36.0-2) ... Setting up libgomp1:amd64 (11.2.0-10ubuntu1) ... Setting up libasan6:amd64 (11.2.0-10ubuntu1) ... Setting up tzdata (2021e-1ubuntu1) ... Current default time zone: 'Etc/UTC' Local time is now: Fri Nov 12 23:17:49 UTC 2021. Universal Time is now: Fri Nov 12 23:17:49 UTC 2021. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up ca-certificates (20211016) ... Updating certificates in /etc/ssl/certs... rehash: warning: skipping ca-certificates.crt,it does not contain exactly one certificate or CRL 7 added, 8 removed; done. Setting up make (4.3-4ubuntu2) ... Setting up libncurses6:amd64 (6.2+20210905-1) ... Setting up libquadmath0:amd64 (11.2.0-10ubuntu1) ... Setting up libmpc3:amd64 (1.2.1-1) ... Setting up lockfile-progs (0.1.19) ... Setting up libatomic1:amd64 (11.2.0-10ubuntu1) ... Setting up usrmerge (25ubuntu2) ... Setting up libss2:amd64 (1.46.4-1ubuntu1) ... Setting up libncursesw6:amd64 (6.2+20210905-1) ... Setting up logsave (1.46.4-1ubuntu1) ... Setting up libubsan1:amd64 (11.2.0-10ubuntu1) ... Setting up mount (2.37.2-4ubuntu1) ... Setting up sensible-utils (0.0.17) ... Setting up libcrypt-dev:amd64 (1:4.4.26-1) ... Setting up gpgconf (2.2.27-2ubuntu1) ... Setting up libisl23:amd64 (0.24-2) ... Setting up libcc1-0:amd64 (11.2.0-10ubuntu1) ... Setting up gpg (2.2.27-2ubuntu1) ... Setting up liblsan0:amd64 (11.2.0-10ubuntu1) ... Setting up libitm1:amd64 (11.2.0-10ubuntu1) ... Setting up libgdbm6:amd64 (1.22-1) ... Setting up libtsan0:amd64 (11.2.0-10ubuntu1) ... Setting up cpp-11 (11.2.0-10ubuntu1) ... Setting up gpg-agent (2.2.27-2ubuntu1) ... Setting up pkgbinarymangler (149) ... Setting up e2fsprogs (1.46.4-1ubuntu1) ... Installing new version of config file /etc/mke2fs.conf ... Setting up libgdbm-compat4:amd64 (1.22-1) ... Setting up libgcc-11-dev:amd64 (11.2.0-10ubuntu1) ... Setting up gcc-11 (11.2.0-10ubuntu1) ... Setting up libstdc++-11-dev:amd64 (11.2.0-10ubuntu1) ... Setting up g++-11 (11.2.0-10ubuntu1) ... Processing triggers for libc-bin (2.34-0ubuntu3) ... Processing triggers for ca-certificates (20211016) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-22405151 amd64 jammy-proposed -c chroot:build-PACKAGEBUILD-22405151 --arch=amd64 --dist=jammy-proposed --nolog -A dcmstack_0.8-3.dsc Initiating build PACKAGEBUILD-22405151 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.15.0-162-generic #170-Ubuntu SMP Mon Oct 18 11:38:05 UTC 2021 x86_64 sbuild (Debian sbuild) 0.75.0 (21 Mar 2018) on lgw01-amd64-011.buildd +==============================================================================+ | dcmstack 0.8-3 (amd64) Fri, 12 Nov 2021 23:17:55 +0000 | +==============================================================================+ Package: dcmstack Version: 0.8-3 Source Version: 0.8-3 Distribution: jammy-proposed Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: binary I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-22405151/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- dcmstack_0.8-3.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/dcmstack-leSMep/dcmstack-0.8' with '<>' I: NOTICE: Log filtering will replace 'build/dcmstack-leSMep' with '<>' +------------------------------------------------------------------------------+ | Install build-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-6fc36H/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-6fc36H/apt_archive ./ InRelease Get:2 copy:/<>/resolver-6fc36H/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-6fc36H/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-6fc36H/apt_archive ./ Sources [349 B] Get:5 copy:/<>/resolver-6fc36H/apt_archive ./ Packages [431 B] Fetched 1737 B in 0s (107 kB/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 652 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-6fc36H/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [652 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 652 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 13257 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in all) +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), dh-python, python3-all, python3-dicom, python3-docutils, python3-mock, python3-nibabel, python3-numpy, python3-numpydoc, python3-pytest, python3-setuptools, python3-sphinx Filtered Build-Depends: debhelper-compat (= 13), dh-python, python3-all, python3-dicom, python3-docutils, python3-mock, python3-nibabel, python3-numpy, python3-numpydoc, python3-pytest, python3-setuptools, python3-sphinx dpkg-deb: building package 'sbuild-build-depends-dcmstack-dummy' in '/<>/resolver-6fc36H/apt_archive/sbuild-build-depends-dcmstack-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-dcmstack-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-6fc36H/apt_archive ./ InRelease Get:2 copy:/<>/resolver-6fc36H/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-6fc36H/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-6fc36H/apt_archive ./ Sources [554 B] Get:5 copy:/<>/resolver-6fc36H/apt_archive ./ Packages [637 B] Fetched 2154 B in 0s (25.7 kB/s) Reading package lists... Reading package lists... Install dcmstack build dependencies (apt-based resolver) -------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper debugedit dh-autoreconf dh-python dh-strip-nondeterminism docutils-common dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libblas3 libbsd0 libdebhelper-perl libdw1 libedit2 libelf1 libexpat1 libfile-stripnondeterminism-perl libgfortran5 libicu67 libjs-jquery libjs-sphinxdoc libjs-underscore liblapack3 liblbfgsb0 libmagic-mgc libmagic1 libmd0 libmpdec3 libpipeline1 libpython3-stdlib libpython3.10-minimal libpython3.10-stdlib libpython3.9-minimal libpython3.9-stdlib libsigsegv2 libsub-override-perl libtool libuchardet0 libxml2 m4 mailcap man-db media-types mime-support po-debconf python-babel-localedata python3 python3-alabaster python3-all python3-attr python3-babel python3-certifi python3-chardet python3-decorator python3-dicom python3-distutils python3-docutils python3-idna python3-imagesize python3-importlib-metadata python3-iniconfig python3-jinja2 python3-lib2to3 python3-markupsafe python3-minimal python3-mock python3-more-itertools python3-nibabel python3-numpy python3-numpydoc python3-packaging python3-pbr python3-pkg-resources python3-pluggy python3-py python3-pydicom python3-pygments python3-pyparsing python3-pytest python3-requests python3-roman python3-scipy python3-setuptools python3-six python3-snowballstemmer python3-sphinx python3-toml python3-tz python3-urllib3 python3-zipp python3.10 python3.10-minimal python3.9 python3.9-minimal sgml-base sphinx-common xml-core Suggested packages: autoconf-archive gnu-standards autoconf-doc dh-make flit gettext-doc libasprintf-dev libgettextpo-dev groff libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl python3-doc python3-tk python3-venv python-attr-doc docutils-doc fonts-linuxlibertine | ttf-linux-libertine texlive-lang-french texlive-latex-base texlive-latex-recommended python-jinja2-doc python-mock-doc python-nibabel-doc gfortran python-numpy-doc python3-dev python3-numpy-dbg subversion python3-matplotlib python3-gdcm python-pygments-doc ttf-bitstream-vera python-pyparsing-doc python3-cryptography python3-openssl python3-socks python-requests-doc python-scipy-doc python-setuptools-doc python3-stemmer dvipng fonts-freefont-otf imagemagick-6.q16 latexmk libjs-mathjax python3-sphinx-rtd-theme sphinx-doc tex-gyre texlive-fonts-recommended texlive-latex-extra texlive-plain-generic python3.10-venv python3.10-doc binfmt-support python3.9-venv python3.9-doc sgml-base-doc Recommended packages: curl | wget | lynx libarchive-cpio-perl javascript-common libltdl-dev libmail-sendmail-perl libpaper-utils python3-pil python3-fuse The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper debugedit dh-autoreconf dh-python dh-strip-nondeterminism docutils-common dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libblas3 libbsd0 libdebhelper-perl libdw1 libedit2 libelf1 libexpat1 libfile-stripnondeterminism-perl libgfortran5 libicu67 libjs-jquery libjs-sphinxdoc libjs-underscore liblapack3 liblbfgsb0 libmagic-mgc libmagic1 libmd0 libmpdec3 libpipeline1 libpython3-stdlib libpython3.10-minimal libpython3.10-stdlib libpython3.9-minimal libpython3.9-stdlib libsigsegv2 libsub-override-perl libtool libuchardet0 libxml2 m4 mailcap man-db media-types mime-support po-debconf python-babel-localedata python3 python3-alabaster python3-all python3-attr python3-babel python3-certifi python3-chardet python3-decorator python3-dicom python3-distutils python3-docutils python3-idna python3-imagesize python3-importlib-metadata python3-iniconfig python3-jinja2 python3-lib2to3 python3-markupsafe python3-minimal python3-mock python3-more-itertools python3-nibabel python3-numpy python3-numpydoc python3-packaging python3-pbr python3-pkg-resources python3-pluggy python3-py python3-pydicom python3-pygments python3-pyparsing python3-pytest python3-requests python3-roman python3-scipy python3-setuptools python3-six python3-snowballstemmer python3-sphinx python3-toml python3-tz python3-urllib3 python3-zipp python3.10 python3.10-minimal python3.9 python3.9-minimal sbuild-build-depends-dcmstack-dummy sgml-base sphinx-common xml-core 0 upgraded, 107 newly installed, 0 to remove and 0 not upgraded. Need to get 95.7 MB of archives. After this operation, 417 MB of additional disk space will be used. 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Setting up sbuild-build-depends-dcmstack-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.15.0-162-generic amd64 (x86_64) Toolchain package versions: binutils_2.37-7ubuntu1 dpkg-dev_1.20.9ubuntu2 g++-11_11.2.0-10ubuntu1 gcc-11_11.2.0-10ubuntu1 libc6-dev_2.34-0ubuntu3 libstdc++-11-dev_11.2.0-10ubuntu1 libstdc++6_11.2.0-10ubuntu1 linux-libc-dev_5.13.0-19.19 Package versions: adduser_3.118ubuntu5 advancecomp_2.1-2.1ubuntu1 apt_2.3.11 autoconf_2.71-2 automake_1:1.16.5-1ubuntu1 autopoint_0.21-4ubuntu3 autotools-dev_20180224.1+nmu1 base-files_12ubuntu2 base-passwd_3.5.52 bash_5.1-3ubuntu2 binutils_2.37-7ubuntu1 binutils-common_2.37-7ubuntu1 binutils-x86-64-linux-gnu_2.37-7ubuntu1 bsdextrautils_2.37.2-4ubuntu1 bsdutils_1:2.37.2-4ubuntu1 build-essential_12.9ubuntu2 bzip2_1.0.8-4ubuntu4 ca-certificates_20211016 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libgcc-11-dev_11.2.0-10ubuntu1 libgcc-s1_11.2.0-10ubuntu1 libgcrypt20_1.9.4-3ubuntu2 libgdbm-compat4_1.22-1 libgdbm6_1.22-1 libgfortran5_11.2.0-10ubuntu1 libgmp10_2:6.2.1+dfsg-1ubuntu3 libgnutls30_3.7.2-2ubuntu1 libgomp1_11.2.0-10ubuntu1 libgpg-error0_1.42-3 libgssapi-krb5-2_1.18.3-7 libhogweed6_3.7.3-1build1 libicu67_67.1-7ubuntu1 libidn2-0_2.3.2-2 libip4tc2_1.8.7-1ubuntu3 libisl23_0.24-2 libitm1_11.2.0-10ubuntu1 libjs-jquery_3.5.1+dfsg+~3.5.5-8 libjs-sphinxdoc_4.2.0-5 libjs-underscore_1.9.1~dfsg-4 libjson-c5_0.15-2build3 libk5crypto3_1.18.3-7 libkeyutils1_1.6.1-2ubuntu2 libkmod2_28-1ubuntu4 libkrb5-3_1.18.3-7 libkrb5support0_1.18.3-7 liblapack3_3.9.0-3ubuntu3 liblbfgsb0_3.0+dfsg.3-9 liblockfile-bin_1.17-1build1 liblockfile1_1.17-1build1 liblsan0_11.2.0-10ubuntu1 liblz4-1_1.9.3-2build1 liblzma5_5.2.5-2build1 libmagic-mgc_1:5.39-3build1 libmagic1_1:5.39-3build1 libmd0_1.0.4-1 libmount1_2.37.2-4ubuntu1 libmpc3_1.2.1-1 libmpdec3_2.5.1-2build1 libmpfr6_4.1.0-3build2 libncurses6_6.2+20210905-1 libncursesw6_6.2+20210905-1 libnettle8_3.7.3-1build1 libnpth0_1.6-3build1 libnsl-dev_1.3.0-2build1 libnsl2_1.3.0-2build1 libp11-kit0_0.24.0-5 libpam-modules_1.4.0-10ubuntu1 libpam-modules-bin_1.4.0-10ubuntu1 libpam-runtime_1.4.0-10ubuntu1 libpam0g_1.4.0-10ubuntu1 libpcre2-8-0_10.37-0ubuntu2 libpcre3_2:8.39-13build4 libperl5.32_5.32.1-3ubuntu3 libpipeline1_1.5.4-1 libpng16-16_1.6.37-3build4 libprocps8_2:3.3.17-5ubuntu3 libpython3-stdlib_3.9.7-4 libpython3.10-minimal_3.10.0-4 libpython3.10-stdlib_3.10.0-4 libpython3.9-minimal_3.9.8-2 libpython3.9-stdlib_3.9.8-2 libquadmath0_11.2.0-10ubuntu1 libreadline8_8.1-2build1 libseccomp2_2.5.2-2ubuntu2 libselinux1_3.1-3build3 libsemanage-common_3.1-1ubuntu3 libsemanage1_3.1-1ubuntu3 libsepol1_3.1-1ubuntu2 libsigsegv2_2.13-1ubuntu2 libsmartcols1_2.37.2-4ubuntu1 libsqlite3-0_3.36.0-2 libss2_1.46.4-1ubuntu1 libssl1.1_1.1.1l-1ubuntu1 libstdc++-11-dev_11.2.0-10ubuntu1 libstdc++6_11.2.0-10ubuntu1 libsub-override-perl_0.09-2 libsystemd0_248.3-1ubuntu8 libtasn1-6_4.17.0-2 libtinfo6_6.2+20210905-1 libtirpc-common_1.3.2-2 libtirpc-dev_1.3.2-2 libtirpc3_1.3.2-2 libtool_2.4.6-15build1 libtsan0_11.2.0-10ubuntu1 libubsan1_11.2.0-10ubuntu1 libuchardet0_0.0.7-1build1 libudev1_248.3-1ubuntu8 libunistring2_0.9.10-6 libuuid1_2.37.2-4ubuntu1 libxml2_2.9.12+dfsg-5 libxxhash0_0.8.0-2build1 libzstd1_1.4.8+dfsg-3 linux-libc-dev_5.13.0-19.19 lockfile-progs_0.1.19 login_1:4.8.1-1ubuntu9 logsave_1.46.4-1ubuntu1 lsb-base_11.1.0ubuntu3 lto-disabled-list_16 m4_1.4.18-5ubuntu1 mailcap_3.70ubuntu1 make_4.3-4ubuntu2 man-db_2.9.4-2build1 mawk_1.3.4.20200120-2build1 media-types_4.0.0 mime-support_3.66 mount_2.37.2-4ubuntu1 ncurses-base_6.2+20210905-1 ncurses-bin_6.2+20210905-1 openssl_1.1.1l-1ubuntu1 optipng_0.7.7-2 passwd_1:4.8.1-1ubuntu9 patch_2.7.6-7build1 perl_5.32.1-3ubuntu3 perl-base_5.32.1-3ubuntu3 perl-modules-5.32_5.32.1-3ubuntu3 pinentry-curses_1.1.1-1build1 pkgbinarymangler_149 po-debconf_1.0.21+nmu1 policyrcd-script-zg2_0.1-3 procps_2:3.3.17-5ubuntu3 python-babel-localedata_2.8.0+dfsg.1-7 python3_3.9.7-4 python3-alabaster_0.7.12-1 python3-all_3.9.7-4 python3-attr_20.3.0-1 python3-babel_2.8.0+dfsg.1-7 python3-certifi_2020.6.20-1 python3-chardet_4.0.0-1 python3-decorator_4.4.2-0ubuntu1 python3-dicom_2.0.0-2 python3-distutils_3.9.8-1 python3-docutils_0.17.1+dfsg-2 python3-idna_2.10-1 python3-imagesize_1.2.0-2 python3-importlib-metadata_4.6.4-1 python3-iniconfig_1.1.1-1 python3-jinja2_3.0.1-2 python3-lib2to3_3.9.8-1 python3-markupsafe_2.0.1-2 python3-minimal_3.9.7-4 python3-mock_4.0.3-1 python3-more-itertools_8.10.0-2 python3-nibabel_3.2.1-2 python3-numpy_1:1.20.2-1ubuntu1 python3-numpydoc_1.1.0-3 python3-packaging_21.0-1 python3-pbr_5.6.0-0ubuntu1 python3-pkg-resources_58.2.0-1 python3-pluggy_0.13.0-7.1 python3-py_1.10.0-1 python3-pydicom_2.0.0-2 python3-pygments_2.7.1+dfsg-2.1 python3-pyparsing_2.4.7-1 python3-pytest_6.2.5-1ubuntu1 python3-requests_2.25.1+dfsg-2 python3-roman_3.3-1 python3-scipy_1.7.1-1ubuntu1 python3-setuptools_58.2.0-1 python3-six_1.16.0-2 python3-snowballstemmer_2.1.0-2 python3-sphinx_4.2.0-5 python3-toml_0.10.2-1 python3-tz_2021.3-1 python3-urllib3_1.26.5-1~exp1 python3-zipp_1.0.0-3 python3.10_3.10.0-4 python3.10-minimal_3.10.0-4 python3.9_3.9.8-2 python3.9-minimal_3.9.8-2 readline-common_8.1-2build1 rpcsvc-proto_1.4.2-0ubuntu5 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-dcmstack-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sgml-base_1.30 sphinx-common_4.2.0-5 systemd_248.3-1ubuntu8 systemd-sysv_248.3-1ubuntu8 systemd-timesyncd_248.3-1ubuntu8 sysvinit-utils_2.96-7ubuntu2 tar_1.34+dfsg-1build2 tzdata_2021e-1ubuntu1 ubuntu-keyring_2021.03.26 usrmerge_25ubuntu2 util-linux_2.37.2-4ubuntu1 xml-core_0.18+nmu1 xz-utils_5.2.5-2build1 zlib1g_1:1.2.11.dfsg-2ubuntu7 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Fri Nov 12 18:56:50 2021 UTC gpgv: using RSA key 3E99A526F5DCC0CBBF1CEEA600BAE74B343369F1 gpgv: issuer "nilesh@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./dcmstack_0.8-3.dsc dpkg-source: info: extracting dcmstack in /<> dpkg-source: info: unpacking dcmstack_0.8.orig.tar.gz dpkg-source: info: unpacking dcmstack_0.8-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying port-to-pytest.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-22405151 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-22405151 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-22405151 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package dcmstack dpkg-buildpackage: info: source version 0.8-3 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --with python3,sphinxdoc --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild install -d /<>/debian/.debhelper/generated/_source/home pybuild --clean -i python{version} -p "3.10 3.9" I: pybuild base:237: python3.10 setup.py clean running clean removing '/<>/.pybuild/cpython3_3.10_dcmstack/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.10' does not exist -- can't clean it I: pybuild base:237: python3.9 setup.py clean running clean removing '/<>/.pybuild/cpython3_3.9_dcmstack/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.9' does not exist -- can't clean it rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/python3-dcmstack.substvars debian/files rm -fr -- debian/python3-dcmstack/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules binary dh binary --with python3,sphinxdoc --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild install -d /<>/debian/.debhelper/generated/_source/home pybuild --configure -i python{version} -p "3.10 3.9" I: pybuild base:237: python3.10 setup.py config running config I: pybuild base:237: python3.9 setup.py config running config dh_auto_build -O--buildsystem=pybuild pybuild --build -i python{version} -p "3.10 3.9" I: pybuild base:237: /usr/bin/python3.10 setup.py build running build running build_py creating /<>/.pybuild/cpython3_3.10_dcmstack/build/dcmstack copying src/dcmstack/dcmmeta.py -> /<>/.pybuild/cpython3_3.10_dcmstack/build/dcmstack copying src/dcmstack/dcmstack.py -> /<>/.pybuild/cpython3_3.10_dcmstack/build/dcmstack copying src/dcmstack/nitool_cli.py -> /<>/.pybuild/cpython3_3.10_dcmstack/build/dcmstack copying src/dcmstack/info.py -> /<>/.pybuild/cpython3_3.10_dcmstack/build/dcmstack copying src/dcmstack/__init__.py -> /<>/.pybuild/cpython3_3.10_dcmstack/build/dcmstack copying src/dcmstack/utils.py -> /<>/.pybuild/cpython3_3.10_dcmstack/build/dcmstack copying src/dcmstack/extract.py -> /<>/.pybuild/cpython3_3.10_dcmstack/build/dcmstack copying src/dcmstack/dcmstack_cli.py -> /<>/.pybuild/cpython3_3.10_dcmstack/build/dcmstack I: pybuild base:237: /usr/bin/python3 setup.py build running build running build_py creating /<>/.pybuild/cpython3_3.9_dcmstack/build/dcmstack copying src/dcmstack/dcmmeta.py -> /<>/.pybuild/cpython3_3.9_dcmstack/build/dcmstack copying src/dcmstack/dcmstack.py -> /<>/.pybuild/cpython3_3.9_dcmstack/build/dcmstack copying src/dcmstack/nitool_cli.py -> /<>/.pybuild/cpython3_3.9_dcmstack/build/dcmstack copying src/dcmstack/info.py -> /<>/.pybuild/cpython3_3.9_dcmstack/build/dcmstack copying src/dcmstack/__init__.py -> /<>/.pybuild/cpython3_3.9_dcmstack/build/dcmstack copying src/dcmstack/utils.py -> /<>/.pybuild/cpython3_3.9_dcmstack/build/dcmstack copying src/dcmstack/extract.py -> /<>/.pybuild/cpython3_3.9_dcmstack/build/dcmstack copying src/dcmstack/dcmstack_cli.py -> /<>/.pybuild/cpython3_3.9_dcmstack/build/dcmstack dh_auto_test -O--buildsystem=pybuild pybuild --test --test-pytest -i python{version} -p "3.10 3.9" I: pybuild base:237: cd /<>/.pybuild/cpython3_3.10_dcmstack/build; python3.10 -m pytest test ============================= test session starts ============================== platform linux -- Python 3.10.0+, pytest-6.2.5, py-1.10.0, pluggy-0.13.0 rootdir: /<> collected 135 items test/test_cli.py ... [ 2%] test/test_dcmmeta.py ................................................... [ 40%] ....................... [ 57%] test/test_dcmstack.py ................................................. [ 93%] test/test_extract.py ......... [100%] =============================== warnings summary =============================== ../../../../../../usr/lib/python3/dist-packages/nibabel/openers.py:16 /usr/lib/python3/dist-packages/nibabel/openers.py:16: DeprecationWarning: The distutils package is deprecated and slated for removal in Python 3.12. Use setuptools or check PEP 632 for potential alternatives from distutils.version import StrictVersion test/test_extract.py:119 /<>/.pybuild/cpython3_3.10_dcmstack/build/test/test_extract.py:119: PytestAssertRewriteWarning: assertion is always true, perhaps remove parentheses? assert(meta_dict['CsaSeries.MrPhoenixProtocol.sEFISPEC.bEFIDataValid'], 1) test/test_extract.py:113 /<>/.pybuild/cpython3_3.10_dcmstack/build/test/test_extract.py:113: PytestAssertRewriteWarning: assertion is always true, perhaps remove parentheses? assert(meta_dict['CsaSeries.MrPhoenixProtocol.sEFISPEC.bEFIDataValid'], 1) .pybuild/cpython3_3.10_dcmstack/build/test/test_cli.py: 12 warnings .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py: 1 warning .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmstack.py: 119 warnings /<>/.pybuild/cpython3_3.10_dcmstack/build/dcmstack/dcmmeta.py:1536: DeprecationWarning: get_affine method is deprecated. Please use the ``img.affine`` property instead. * deprecated from version: 2.5.1 * Will raise as of version: 4.0 affine = np.dot(np.diag([-1., -1., 1., 1.]), dcm_wrp.get_affine()) .pybuild/cpython3_3.10_dcmstack/build/test/test_cli.py: 12 warnings .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmstack.py: 47 warnings /<>/.pybuild/cpython3_3.10_dcmstack/build/dcmstack/dcmstack.py:845: DeprecationWarning: get_data() is deprecated in favor of get_fdata(), which has a more predictable return type. To obtain get_data() behavior going forward, use numpy.asanyarray(img.dataobj). * deprecated from version: 3.0 * Will raise as of version: 5.0 self._files_info[file_idx][0].nii_img.get_data()[:, :, 0] .pybuild/cpython3_3.10_dcmstack/build/test/test_cli.py::TestDcmstackCli::test_basic .pybuild/cpython3_3.10_dcmstack/build/test/test_cli.py::TestDcmstackCli::test_embed .pybuild/cpython3_3.10_dcmstack/build/test/test_cli.py::TestNitoolCli::test_basic .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmstack.py::TestToNifti::test_single_vol .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmstack.py::TestToNifti::test_slice_dim_reorient .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmstack.py::TestToNifti::test_two_time_vol .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmstack.py::TestToNifti::test_two_vector_vol .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmstack.py::TestToNifti::test_allow_dummies /usr/lib/python3/dist-packages/nibabel/nifti1.py:1581: UserWarning: Multiple slice orders satisfy: sequential decreasing, alternating decreasing, alternating increasing 2. Choosing the first one warnings.warn( .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_slice .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_time .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_vector .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py::test_split_keep_spatial /<>/.pybuild/cpython3_3.10_dcmstack/build/dcmstack/dcmmeta.py:1438: DeprecationWarning: get_data() is deprecated in favor of get_fdata(), which has a more predictable return type. To obtain get_data() behavior going forward, use numpy.asanyarray(img.dataobj). * deprecated from version: 3.0 * Will raise as of version: 5.0 data = self.nii_img.get_data() .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_slice .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_time .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_vector .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py::test_split_keep_spatial /<>/.pybuild/cpython3_3.10_dcmstack/build/dcmstack/dcmmeta.py:1465: FutureWarning: Using a non-tuple sequence for multidimensional indexing is deprecated; use `arr[tuple(seq)]` instead of `arr[seq]`. In the future this will be interpreted as an array index, `arr[np.array(seq)]`, which will result either in an error or a different result. split_data = data[slices].copy() .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_slice .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_slice .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_slice /<>/.pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py:1005: DeprecationWarning: get_data() is deprecated in favor of get_fdata(), which has a more predictable return type. To obtain get_data() behavior going forward, use numpy.asanyarray(img.dataobj). * deprecated from version: 3.0 * Will raise as of version: 5.0 assert(np.all(nw_split.nii_img.get_data() == .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_time .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_time .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_time .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_time .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_time /<>/.pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py:1014: DeprecationWarning: get_data() is deprecated in favor of get_fdata(), which has a more predictable return type. To obtain get_data() behavior going forward, use numpy.asanyarray(img.dataobj). * deprecated from version: 3.0 * Will raise as of version: 5.0 assert(np.all(nw_split.nii_img.get_data() == .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_vector .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_vector .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_vector .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_vector .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_vector .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_vector .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_vector /<>/.pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py:1023: DeprecationWarning: get_data() is deprecated in favor of get_fdata(), which has a more predictable return type. To obtain get_data() behavior going forward, use numpy.asanyarray(img.dataobj). * deprecated from version: 3.0 * Will raise as of version: 5.0 assert(np.all(nw_split.nii_img.get_data() == .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py::test_from_dicom /<>/.pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py:1048: DeprecationWarning: get_affine method is deprecated. Please use the ``img.affine`` property instead. * deprecated from version: 2.5.1 * Will raise as of version: 4.0 assert(np.allclose(np.dot(np.diag([-1., -1., 1., 1.]), src_dw.get_affine()), .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py: 15 warnings /<>/.pybuild/cpython3_3.10_dcmstack/build/dcmstack/dcmmeta.py:1650: DeprecationWarning: get_data() is deprecated in favor of get_fdata(), which has a more predictable return type. To obtain get_data() behavior going forward, use numpy.asanyarray(img.dataobj). * deprecated from version: 3.0 * Will raise as of version: 5.0 result_dtype = max(input_wrp.nii_img.get_data().dtype .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py: 15 warnings /<>/.pybuild/cpython3_3.10_dcmstack/build/dcmstack/dcmmeta.py:1724: DeprecationWarning: get_data() is deprecated in favor of get_fdata(), which has a more predictable return type. To obtain get_data() behavior going forward, use numpy.asanyarray(img.dataobj). * deprecated from version: 3.0 * Will raise as of version: 5.0 result_data[data_slices] = input_nii.get_data().squeeze() .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py::test_from_2d_slice_to_3d .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py::test_from_3d_time_to_4d .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py::test_from_3d_vector_to_4d .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py::test_merge_inconsistent_hdr .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py::test_merge_with_slc_and_without /<>/.pybuild/cpython3_3.10_dcmstack/build/dcmstack/dcmmeta.py:1724: FutureWarning: Using a non-tuple sequence for multidimensional indexing is deprecated; use `arr[tuple(seq)]` instead of `arr[seq]`. In the future this will be interpreted as an array index, `arr[np.array(seq)]`, which will result either in an error or a different result. result_data[data_slices] = input_nii.get_data().squeeze() .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py::test_from_2d_slice_to_3d /<>/.pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py:1080: DeprecationWarning: get_data() is deprecated in favor of get_fdata(), which has a more predictable return type. To obtain get_data() behavior going forward, use numpy.asanyarray(img.dataobj). * deprecated from version: 3.0 * Will raise as of version: 5.0 merged_data = merged.nii_img.get_data() .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py::test_from_3d_time_to_4d /<>/.pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py:1117: DeprecationWarning: get_data() is deprecated in favor of get_fdata(), which has a more predictable return type. To obtain get_data() behavior going forward, use numpy.asanyarray(img.dataobj). * deprecated from version: 3.0 * Will raise as of version: 5.0 merged_data = merged.nii_img.get_data() .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py::test_from_3d_vector_to_4d /<>/.pybuild/cpython3_3.10_dcmstack/build/test/test_dcmmeta.py:1155: DeprecationWarning: get_data() is deprecated in favor of get_fdata(), which has a more predictable return type. To obtain get_data() behavior going forward, use numpy.asanyarray(img.dataobj). * deprecated from version: 3.0 * Will raise as of version: 5.0 merged_data = merged.nii_img.get_data() .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmstack.py::TestGetShape::test_allow_dummy .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmstack.py::TestGetData::test_allow_dummy .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmstack.py::TestToNifti::test_allow_dummies /<>/.pybuild/cpython3_3.10_dcmstack/build/dcmstack/dcmstack.py:373: DeprecationWarning: get_data() is deprecated in favor of get_fdata(), which has a more predictable return type. To obtain get_data() behavior going forward, use numpy.asanyarray(img.dataobj). * deprecated from version: 3.0 * Will raise as of version: 5.0 data = np.empty_like(reference.nii_img.get_data()) .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmstack.py::TestToNifti::test_allow_dummies /<>/.pybuild/cpython3_3.10_dcmstack/build/test/test_dcmstack.py:659: DeprecationWarning: get_data() is deprecated in favor of get_fdata(), which has a more predictable return type. To obtain get_data() behavior going forward, use numpy.asanyarray(img.dataobj). * deprecated from version: 3.0 * Will raise as of version: 5.0 data = nii.get_data() .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmstack.py::test_fsl_hack .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmstack.py::test_pix_overflow /usr/lib/python3/dist-packages/pydicom/dataset.py:1844: DeprecationWarning: Starting in pydicom 3.0, Dataset.file_meta must be a FileMetaDataset class instance warnings.warn( .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmstack.py::test_fsl_hack .pybuild/cpython3_3.10_dcmstack/build/test/test_dcmstack.py::test_pix_overflow /<>/.pybuild/cpython3_3.10_dcmstack/build/test/test_dcmstack.py:67: DeprecationWarning: tostring() is deprecated. Use tobytes() instead. ds.PixelData = arr.tostring() -- Docs: https://docs.pytest.org/en/stable/warnings.html ====================== 135 passed, 272 warnings in 7.44s ======================= I: pybuild base:237: cd /<>/.pybuild/cpython3_3.9_dcmstack/build; python3.9 -m pytest test ============================= test session starts ============================== platform linux -- Python 3.9.8, pytest-6.2.5, py-1.10.0, pluggy-0.13.0 rootdir: /<> collected 135 items test/test_cli.py ... [ 2%] test/test_dcmmeta.py ................................................... [ 40%] ....................... [ 57%] test/test_dcmstack.py ................................................. [ 93%] test/test_extract.py ......... [100%] =============================== warnings summary =============================== test/test_extract.py:119 /<>/.pybuild/cpython3_3.9_dcmstack/build/test/test_extract.py:119: PytestAssertRewriteWarning: assertion is always true, perhaps remove parentheses? assert(meta_dict['CsaSeries.MrPhoenixProtocol.sEFISPEC.bEFIDataValid'], 1) test/test_extract.py:113 /<>/.pybuild/cpython3_3.9_dcmstack/build/test/test_extract.py:113: PytestAssertRewriteWarning: assertion is always true, perhaps remove parentheses? assert(meta_dict['CsaSeries.MrPhoenixProtocol.sEFISPEC.bEFIDataValid'], 1) .pybuild/cpython3_3.9_dcmstack/build/test/test_cli.py: 12 warnings .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py: 1 warning .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmstack.py: 119 warnings /<>/.pybuild/cpython3_3.9_dcmstack/build/dcmstack/dcmmeta.py:1536: DeprecationWarning: get_affine method is deprecated. Please use the ``img.affine`` property instead. * deprecated from version: 2.5.1 * Will raise as of version: 4.0 affine = np.dot(np.diag([-1., -1., 1., 1.]), dcm_wrp.get_affine()) .pybuild/cpython3_3.9_dcmstack/build/test/test_cli.py: 12 warnings .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmstack.py: 47 warnings /<>/.pybuild/cpython3_3.9_dcmstack/build/dcmstack/dcmstack.py:845: DeprecationWarning: get_data() is deprecated in favor of get_fdata(), which has a more predictable return type. To obtain get_data() behavior going forward, use numpy.asanyarray(img.dataobj). * deprecated from version: 3.0 * Will raise as of version: 5.0 self._files_info[file_idx][0].nii_img.get_data()[:, :, 0] .pybuild/cpython3_3.9_dcmstack/build/test/test_cli.py::TestDcmstackCli::test_basic .pybuild/cpython3_3.9_dcmstack/build/test/test_cli.py::TestDcmstackCli::test_embed .pybuild/cpython3_3.9_dcmstack/build/test/test_cli.py::TestNitoolCli::test_basic .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmstack.py::TestToNifti::test_single_vol .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmstack.py::TestToNifti::test_slice_dim_reorient .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmstack.py::TestToNifti::test_two_time_vol .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmstack.py::TestToNifti::test_two_vector_vol .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmstack.py::TestToNifti::test_allow_dummies /usr/lib/python3/dist-packages/nibabel/nifti1.py:1581: UserWarning: Multiple slice orders satisfy: sequential decreasing, alternating decreasing, alternating increasing 2. Choosing the first one warnings.warn( .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_slice .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_time .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_vector .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py::test_split_keep_spatial /<>/.pybuild/cpython3_3.9_dcmstack/build/dcmstack/dcmmeta.py:1438: DeprecationWarning: get_data() is deprecated in favor of get_fdata(), which has a more predictable return type. To obtain get_data() behavior going forward, use numpy.asanyarray(img.dataobj). * deprecated from version: 3.0 * Will raise as of version: 5.0 data = self.nii_img.get_data() .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_slice .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_time .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_vector .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py::test_split_keep_spatial /<>/.pybuild/cpython3_3.9_dcmstack/build/dcmstack/dcmmeta.py:1465: FutureWarning: Using a non-tuple sequence for multidimensional indexing is deprecated; use `arr[tuple(seq)]` instead of `arr[seq]`. In the future this will be interpreted as an array index, `arr[np.array(seq)]`, which will result either in an error or a different result. split_data = data[slices].copy() .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_slice .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_slice .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_slice /<>/.pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py:1005: DeprecationWarning: get_data() is deprecated in favor of get_fdata(), which has a more predictable return type. To obtain get_data() behavior going forward, use numpy.asanyarray(img.dataobj). * deprecated from version: 3.0 * Will raise as of version: 5.0 assert(np.all(nw_split.nii_img.get_data() == .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_time .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_time .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_time .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_time .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_time /<>/.pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py:1014: DeprecationWarning: get_data() is deprecated in favor of get_fdata(), which has a more predictable return type. To obtain get_data() behavior going forward, use numpy.asanyarray(img.dataobj). * deprecated from version: 3.0 * Will raise as of version: 5.0 assert(np.all(nw_split.nii_img.get_data() == .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_vector .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_vector .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_vector .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_vector .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_vector .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_vector .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py::TestSplit::test_split_vector /<>/.pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py:1023: DeprecationWarning: get_data() is deprecated in favor of get_fdata(), which has a more predictable return type. To obtain get_data() behavior going forward, use numpy.asanyarray(img.dataobj). * deprecated from version: 3.0 * Will raise as of version: 5.0 assert(np.all(nw_split.nii_img.get_data() == .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py::test_from_dicom /<>/.pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py:1048: DeprecationWarning: get_affine method is deprecated. Please use the ``img.affine`` property instead. * deprecated from version: 2.5.1 * Will raise as of version: 4.0 assert(np.allclose(np.dot(np.diag([-1., -1., 1., 1.]), src_dw.get_affine()), .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py: 15 warnings /<>/.pybuild/cpython3_3.9_dcmstack/build/dcmstack/dcmmeta.py:1650: DeprecationWarning: get_data() is deprecated in favor of get_fdata(), which has a more predictable return type. To obtain get_data() behavior going forward, use numpy.asanyarray(img.dataobj). * deprecated from version: 3.0 * Will raise as of version: 5.0 result_dtype = max(input_wrp.nii_img.get_data().dtype .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py: 15 warnings /<>/.pybuild/cpython3_3.9_dcmstack/build/dcmstack/dcmmeta.py:1724: DeprecationWarning: get_data() is deprecated in favor of get_fdata(), which has a more predictable return type. To obtain get_data() behavior going forward, use numpy.asanyarray(img.dataobj). * deprecated from version: 3.0 * Will raise as of version: 5.0 result_data[data_slices] = input_nii.get_data().squeeze() .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py::test_from_2d_slice_to_3d .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py::test_from_3d_time_to_4d .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py::test_from_3d_vector_to_4d .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py::test_merge_inconsistent_hdr .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py::test_merge_with_slc_and_without /<>/.pybuild/cpython3_3.9_dcmstack/build/dcmstack/dcmmeta.py:1724: FutureWarning: Using a non-tuple sequence for multidimensional indexing is deprecated; use `arr[tuple(seq)]` instead of `arr[seq]`. In the future this will be interpreted as an array index, `arr[np.array(seq)]`, which will result either in an error or a different result. result_data[data_slices] = input_nii.get_data().squeeze() .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py::test_from_2d_slice_to_3d /<>/.pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py:1080: DeprecationWarning: get_data() is deprecated in favor of get_fdata(), which has a more predictable return type. To obtain get_data() behavior going forward, use numpy.asanyarray(img.dataobj). * deprecated from version: 3.0 * Will raise as of version: 5.0 merged_data = merged.nii_img.get_data() .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py::test_from_3d_time_to_4d /<>/.pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py:1117: DeprecationWarning: get_data() is deprecated in favor of get_fdata(), which has a more predictable return type. To obtain get_data() behavior going forward, use numpy.asanyarray(img.dataobj). * deprecated from version: 3.0 * Will raise as of version: 5.0 merged_data = merged.nii_img.get_data() .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py::test_from_3d_vector_to_4d /<>/.pybuild/cpython3_3.9_dcmstack/build/test/test_dcmmeta.py:1155: DeprecationWarning: get_data() is deprecated in favor of get_fdata(), which has a more predictable return type. To obtain get_data() behavior going forward, use numpy.asanyarray(img.dataobj). * deprecated from version: 3.0 * Will raise as of version: 5.0 merged_data = merged.nii_img.get_data() .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmstack.py::TestGetShape::test_allow_dummy .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmstack.py::TestGetData::test_allow_dummy .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmstack.py::TestToNifti::test_allow_dummies /<>/.pybuild/cpython3_3.9_dcmstack/build/dcmstack/dcmstack.py:373: DeprecationWarning: get_data() is deprecated in favor of get_fdata(), which has a more predictable return type. To obtain get_data() behavior going forward, use numpy.asanyarray(img.dataobj). * deprecated from version: 3.0 * Will raise as of version: 5.0 data = np.empty_like(reference.nii_img.get_data()) .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmstack.py::TestToNifti::test_allow_dummies /<>/.pybuild/cpython3_3.9_dcmstack/build/test/test_dcmstack.py:659: DeprecationWarning: get_data() is deprecated in favor of get_fdata(), which has a more predictable return type. To obtain get_data() behavior going forward, use numpy.asanyarray(img.dataobj). * deprecated from version: 3.0 * Will raise as of version: 5.0 data = nii.get_data() .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmstack.py::test_fsl_hack .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmstack.py::test_pix_overflow /usr/lib/python3/dist-packages/pydicom/dataset.py:1844: DeprecationWarning: Starting in pydicom 3.0, Dataset.file_meta must be a FileMetaDataset class instance warnings.warn( .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmstack.py::test_fsl_hack .pybuild/cpython3_3.9_dcmstack/build/test/test_dcmstack.py::test_pix_overflow /<>/.pybuild/cpython3_3.9_dcmstack/build/test/test_dcmstack.py:67: DeprecationWarning: tostring() is deprecated. Use tobytes() instead. ds.PixelData = arr.tostring() -- Docs: https://docs.pytest.org/en/stable/warnings.html ====================== 135 passed, 271 warnings in 6.21s ======================= rm -fr -- /tmp/dh-xdg-rundir-7elq8NYc create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild rm -f -- debian/python3-dcmstack.substvars rm -fr -- debian/.debhelper/generated/python3-dcmstack/ debian/python3-dcmstack/ debian/tmp/ dh_auto_install --destdir=debian/python3-dcmstack/ -O--buildsystem=pybuild install -d /<>/debian/python3-dcmstack pybuild --install -i python{version} -p "3.10 3.9" --dest-dir /<>/debian/python3-dcmstack I: pybuild base:237: /usr/bin/python3.10 setup.py install --root /<>/debian/python3-dcmstack running install running build running build_py running install_lib creating /<>/debian/python3-dcmstack/usr creating /<>/debian/python3-dcmstack/usr/lib creating /<>/debian/python3-dcmstack/usr/lib/python3.10 creating /<>/debian/python3-dcmstack/usr/lib/python3.10/dist-packages creating /<>/debian/python3-dcmstack/usr/lib/python3.10/dist-packages/dcmstack creating /<>/debian/python3-dcmstack/usr/lib/python3.10/dist-packages/dcmstack/__pycache__ copying /<>/.pybuild/cpython3_3.10_dcmstack/build/dcmstack/__pycache__/info.cpython-310.pyc -> /<>/debian/python3-dcmstack/usr/lib/python3.10/dist-packages/dcmstack/__pycache__ copying /<>/.pybuild/cpython3_3.10_dcmstack/build/dcmstack/__pycache__/dcmmeta.cpython-310.pyc -> /<>/debian/python3-dcmstack/usr/lib/python3.10/dist-packages/dcmstack/__pycache__ copying /<>/.pybuild/cpython3_3.10_dcmstack/build/dcmstack/__pycache__/utils.cpython-310.pyc -> /<>/debian/python3-dcmstack/usr/lib/python3.10/dist-packages/dcmstack/__pycache__ copying /<>/.pybuild/cpython3_3.10_dcmstack/build/dcmstack/__pycache__/nitool_cli.cpython-310.pyc -> /<>/debian/python3-dcmstack/usr/lib/python3.10/dist-packages/dcmstack/__pycache__ copying /<>/.pybuild/cpython3_3.10_dcmstack/build/dcmstack/__pycache__/extract.cpython-310.pyc -> /<>/debian/python3-dcmstack/usr/lib/python3.10/dist-packages/dcmstack/__pycache__ copying /<>/.pybuild/cpython3_3.10_dcmstack/build/dcmstack/__pycache__/__init__.cpython-310.pyc -> /<>/debian/python3-dcmstack/usr/lib/python3.10/dist-packages/dcmstack/__pycache__ copying /<>/.pybuild/cpython3_3.10_dcmstack/build/dcmstack/__pycache__/dcmstack.cpython-310.pyc -> /<>/debian/python3-dcmstack/usr/lib/python3.10/dist-packages/dcmstack/__pycache__ copying /<>/.pybuild/cpython3_3.10_dcmstack/build/dcmstack/__pycache__/dcmstack_cli.cpython-310.pyc -> /<>/debian/python3-dcmstack/usr/lib/python3.10/dist-packages/dcmstack/__pycache__ copying /<>/.pybuild/cpython3_3.10_dcmstack/build/dcmstack/dcmmeta.py -> /<>/debian/python3-dcmstack/usr/lib/python3.10/dist-packages/dcmstack copying /<>/.pybuild/cpython3_3.10_dcmstack/build/dcmstack/dcmstack.py -> /<>/debian/python3-dcmstack/usr/lib/python3.10/dist-packages/dcmstack copying /<>/.pybuild/cpython3_3.10_dcmstack/build/dcmstack/nitool_cli.py -> /<>/debian/python3-dcmstack/usr/lib/python3.10/dist-packages/dcmstack copying /<>/.pybuild/cpython3_3.10_dcmstack/build/dcmstack/info.py -> /<>/debian/python3-dcmstack/usr/lib/python3.10/dist-packages/dcmstack copying /<>/.pybuild/cpython3_3.10_dcmstack/build/dcmstack/__init__.py -> /<>/debian/python3-dcmstack/usr/lib/python3.10/dist-packages/dcmstack copying /<>/.pybuild/cpython3_3.10_dcmstack/build/dcmstack/utils.py -> /<>/debian/python3-dcmstack/usr/lib/python3.10/dist-packages/dcmstack copying /<>/.pybuild/cpython3_3.10_dcmstack/build/dcmstack/extract.py -> /<>/debian/python3-dcmstack/usr/lib/python3.10/dist-packages/dcmstack copying /<>/.pybuild/cpython3_3.10_dcmstack/build/dcmstack/dcmstack_cli.py -> /<>/debian/python3-dcmstack/usr/lib/python3.10/dist-packages/dcmstack byte-compiling /<>/debian/python3-dcmstack/usr/lib/python3.10/dist-packages/dcmstack/dcmmeta.py to dcmmeta.cpython-310.pyc byte-compiling /<>/debian/python3-dcmstack/usr/lib/python3.10/dist-packages/dcmstack/dcmstack.py to dcmstack.cpython-310.pyc byte-compiling /<>/debian/python3-dcmstack/usr/lib/python3.10/dist-packages/dcmstack/nitool_cli.py to nitool_cli.cpython-310.pyc byte-compiling /<>/debian/python3-dcmstack/usr/lib/python3.10/dist-packages/dcmstack/info.py to info.cpython-310.pyc byte-compiling /<>/debian/python3-dcmstack/usr/lib/python3.10/dist-packages/dcmstack/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-dcmstack/usr/lib/python3.10/dist-packages/dcmstack/utils.py to utils.cpython-310.pyc byte-compiling /<>/debian/python3-dcmstack/usr/lib/python3.10/dist-packages/dcmstack/extract.py to extract.cpython-310.pyc byte-compiling /<>/debian/python3-dcmstack/usr/lib/python3.10/dist-packages/dcmstack/dcmstack_cli.py to dcmstack_cli.cpython-310.pyc running install_egg_info running egg_info creating src/dcmstack.egg-info writing src/dcmstack.egg-info/PKG-INFO writing dependency_links to src/dcmstack.egg-info/dependency_links.txt writing entry points to src/dcmstack.egg-info/entry_points.txt writing requirements to src/dcmstack.egg-info/requires.txt writing top-level names to src/dcmstack.egg-info/top_level.txt writing manifest file 'src/dcmstack.egg-info/SOURCES.txt' reading manifest file 'src/dcmstack.egg-info/SOURCES.txt' adding license file 'COPYING' writing manifest file 'src/dcmstack.egg-info/SOURCES.txt' Copying src/dcmstack.egg-info to /<>/debian/python3-dcmstack/usr/lib/python3.10/dist-packages/dcmstack-0.8.0.egg-info Skipping SOURCES.txt running install_scripts Installing dcmstack script to /<>/debian/python3-dcmstack/usr/bin Installing nitool script to /<>/debian/python3-dcmstack/usr/bin I: pybuild base:237: /usr/bin/python3 setup.py install --root /<>/debian/python3-dcmstack running install running build running build_py running install_lib creating /<>/debian/python3-dcmstack/usr/lib/python3.9 creating /<>/debian/python3-dcmstack/usr/lib/python3.9/dist-packages creating /<>/debian/python3-dcmstack/usr/lib/python3.9/dist-packages/dcmstack creating /<>/debian/python3-dcmstack/usr/lib/python3.9/dist-packages/dcmstack/__pycache__ copying /<>/.pybuild/cpython3_3.9_dcmstack/build/dcmstack/__pycache__/nitool_cli.cpython-39.pyc -> /<>/debian/python3-dcmstack/usr/lib/python3.9/dist-packages/dcmstack/__pycache__ copying /<>/.pybuild/cpython3_3.9_dcmstack/build/dcmstack/__pycache__/utils.cpython-39.pyc -> /<>/debian/python3-dcmstack/usr/lib/python3.9/dist-packages/dcmstack/__pycache__ copying /<>/.pybuild/cpython3_3.9_dcmstack/build/dcmstack/__pycache__/__init__.cpython-39.pyc -> /<>/debian/python3-dcmstack/usr/lib/python3.9/dist-packages/dcmstack/__pycache__ copying /<>/.pybuild/cpython3_3.9_dcmstack/build/dcmstack/__pycache__/info.cpython-39.pyc -> /<>/debian/python3-dcmstack/usr/lib/python3.9/dist-packages/dcmstack/__pycache__ copying /<>/.pybuild/cpython3_3.9_dcmstack/build/dcmstack/__pycache__/dcmmeta.cpython-39.pyc -> /<>/debian/python3-dcmstack/usr/lib/python3.9/dist-packages/dcmstack/__pycache__ copying /<>/.pybuild/cpython3_3.9_dcmstack/build/dcmstack/__pycache__/extract.cpython-39.pyc -> /<>/debian/python3-dcmstack/usr/lib/python3.9/dist-packages/dcmstack/__pycache__ copying /<>/.pybuild/cpython3_3.9_dcmstack/build/dcmstack/__pycache__/dcmstack_cli.cpython-39.pyc -> /<>/debian/python3-dcmstack/usr/lib/python3.9/dist-packages/dcmstack/__pycache__ copying /<>/.pybuild/cpython3_3.9_dcmstack/build/dcmstack/__pycache__/dcmstack.cpython-39.pyc -> /<>/debian/python3-dcmstack/usr/lib/python3.9/dist-packages/dcmstack/__pycache__ copying /<>/.pybuild/cpython3_3.9_dcmstack/build/dcmstack/dcmmeta.py -> /<>/debian/python3-dcmstack/usr/lib/python3.9/dist-packages/dcmstack copying /<>/.pybuild/cpython3_3.9_dcmstack/build/dcmstack/dcmstack.py -> /<>/debian/python3-dcmstack/usr/lib/python3.9/dist-packages/dcmstack copying /<>/.pybuild/cpython3_3.9_dcmstack/build/dcmstack/nitool_cli.py -> /<>/debian/python3-dcmstack/usr/lib/python3.9/dist-packages/dcmstack copying /<>/.pybuild/cpython3_3.9_dcmstack/build/dcmstack/info.py -> /<>/debian/python3-dcmstack/usr/lib/python3.9/dist-packages/dcmstack copying /<>/.pybuild/cpython3_3.9_dcmstack/build/dcmstack/__init__.py -> /<>/debian/python3-dcmstack/usr/lib/python3.9/dist-packages/dcmstack copying /<>/.pybuild/cpython3_3.9_dcmstack/build/dcmstack/utils.py -> /<>/debian/python3-dcmstack/usr/lib/python3.9/dist-packages/dcmstack copying /<>/.pybuild/cpython3_3.9_dcmstack/build/dcmstack/extract.py -> /<>/debian/python3-dcmstack/usr/lib/python3.9/dist-packages/dcmstack copying /<>/.pybuild/cpython3_3.9_dcmstack/build/dcmstack/dcmstack_cli.py -> /<>/debian/python3-dcmstack/usr/lib/python3.9/dist-packages/dcmstack byte-compiling /<>/debian/python3-dcmstack/usr/lib/python3.9/dist-packages/dcmstack/dcmmeta.py to dcmmeta.cpython-39.pyc byte-compiling /<>/debian/python3-dcmstack/usr/lib/python3.9/dist-packages/dcmstack/dcmstack.py to dcmstack.cpython-39.pyc byte-compiling /<>/debian/python3-dcmstack/usr/lib/python3.9/dist-packages/dcmstack/nitool_cli.py to nitool_cli.cpython-39.pyc byte-compiling /<>/debian/python3-dcmstack/usr/lib/python3.9/dist-packages/dcmstack/info.py to info.cpython-39.pyc byte-compiling /<>/debian/python3-dcmstack/usr/lib/python3.9/dist-packages/dcmstack/__init__.py to __init__.cpython-39.pyc byte-compiling /<>/debian/python3-dcmstack/usr/lib/python3.9/dist-packages/dcmstack/utils.py to utils.cpython-39.pyc byte-compiling /<>/debian/python3-dcmstack/usr/lib/python3.9/dist-packages/dcmstack/extract.py to extract.cpython-39.pyc byte-compiling /<>/debian/python3-dcmstack/usr/lib/python3.9/dist-packages/dcmstack/dcmstack_cli.py to dcmstack_cli.cpython-39.pyc running install_egg_info running egg_info writing src/dcmstack.egg-info/PKG-INFO writing dependency_links to src/dcmstack.egg-info/dependency_links.txt writing entry points to src/dcmstack.egg-info/entry_points.txt writing requirements to src/dcmstack.egg-info/requires.txt writing top-level names to src/dcmstack.egg-info/top_level.txt reading manifest file 'src/dcmstack.egg-info/SOURCES.txt' adding license file 'COPYING' writing manifest file 'src/dcmstack.egg-info/SOURCES.txt' Copying src/dcmstack.egg-info to /<>/debian/python3-dcmstack/usr/lib/python3.9/dist-packages/dcmstack-0.8.0.egg-info Skipping SOURCES.txt running install_scripts Installing dcmstack script to /<>/debian/python3-dcmstack/usr/bin Installing nitool script to /<>/debian/python3-dcmstack/usr/bin debian/rules override_dh_installdocs make[1]: Entering directory '/<>' PYTHONPATH=. http_proxy='127.0.0.1:9' python3 -m sphinx -N -bhtml doc/ build/html Running Sphinx v4.2.0 making output directory... done [autosummary] generating autosummary for: CLI_Tutorial.rst, DcmMeta_Extension.rst, Introduction.rst, Python_Tutorial.rst, dcmstack.rst, index.rst, modules.rst building [mo]: targets for 0 po files that are out of date building [html]: targets for 7 source files that are out of date updating environment: [new config] 7 added, 0 changed, 0 removed reading sources... [ 14%] CLI_Tutorial reading sources... [ 28%] DcmMeta_Extension reading sources... [ 42%] Introduction reading sources... [ 57%] Python_Tutorial reading sources... [ 71%] dcmstack reading sources... [ 85%] index reading sources... [100%] modules /<>/src/dcmstack/dcmstack.py:docstring of dcmstack.dcmstack.DicomOrdering:34: WARNING: autosummary: stub file not found 'dcmstack.dcmstack.DicomOrdering.get_ordinate'. Check your autosummary_generate setting. /<>/src/dcmstack/dcmstack.py:docstring of dcmstack.dcmstack.DicomStack:56: WARNING: autosummary: stub file not found 'dcmstack.dcmstack.DicomStack.add_dcm'. Check your autosummary_generate setting. /<>/src/dcmstack/dcmstack.py:docstring of dcmstack.dcmstack.DicomStack:56: WARNING: autosummary: stub file not found 'dcmstack.dcmstack.DicomStack.clear'. Check your autosummary_generate setting. /<>/src/dcmstack/dcmstack.py:docstring of dcmstack.dcmstack.DicomStack:56: WARNING: autosummary: stub file not found 'dcmstack.dcmstack.DicomStack.get_affine'. Check your autosummary_generate setting. /<>/src/dcmstack/dcmstack.py:docstring of dcmstack.dcmstack.DicomStack:56: WARNING: autosummary: stub file not found 'dcmstack.dcmstack.DicomStack.get_data'. Check your autosummary_generate setting. /<>/src/dcmstack/dcmstack.py:docstring of dcmstack.dcmstack.DicomStack:56: WARNING: autosummary: stub file not found 'dcmstack.dcmstack.DicomStack.get_shape'. Check your autosummary_generate setting. /<>/src/dcmstack/dcmstack.py:docstring of dcmstack.dcmstack.DicomStack:56: WARNING: autosummary: stub file not found 'dcmstack.dcmstack.DicomStack.to_nifti'. Check your autosummary_generate setting. /<>/src/dcmstack/dcmstack.py:docstring of dcmstack.dcmstack.DicomStack:56: WARNING: autosummary: stub file not found 'dcmstack.dcmstack.DicomStack.to_nifti_wrapper'. Check your autosummary_generate setting. /<>/src/dcmstack/dcmmeta.py:docstring of dcmstack.dcmmeta.NiftiWrapper:36: WARNING: autosummary: stub file not found 'dcmstack.dcmmeta.NiftiWrapper.from_dicom'. Check your autosummary_generate setting. /<>/src/dcmstack/dcmmeta.py:docstring of dcmstack.dcmmeta.NiftiWrapper:36: WARNING: autosummary: stub file not found 'dcmstack.dcmmeta.NiftiWrapper.from_dicom_wrapper'. Check your autosummary_generate setting. /<>/src/dcmstack/dcmmeta.py:docstring of dcmstack.dcmmeta.NiftiWrapper:36: WARNING: autosummary: stub file not found 'dcmstack.dcmmeta.NiftiWrapper.from_filename'. Check your autosummary_generate setting. /<>/src/dcmstack/dcmmeta.py:docstring of dcmstack.dcmmeta.NiftiWrapper:36: WARNING: autosummary: stub file not found 'dcmstack.dcmmeta.NiftiWrapper.from_sequence'. Check your autosummary_generate setting. /<>/src/dcmstack/dcmmeta.py:docstring of dcmstack.dcmmeta.NiftiWrapper:36: WARNING: autosummary: stub file not found 'dcmstack.dcmmeta.NiftiWrapper.get_meta'. Check your autosummary_generate setting. /<>/src/dcmstack/dcmmeta.py:docstring of dcmstack.dcmmeta.NiftiWrapper:36: WARNING: autosummary: stub file not found 'dcmstack.dcmmeta.NiftiWrapper.meta_valid'. Check your autosummary_generate setting. /<>/src/dcmstack/dcmmeta.py:docstring of dcmstack.dcmmeta.NiftiWrapper:36: WARNING: autosummary: stub file not found 'dcmstack.dcmmeta.NiftiWrapper.remove_extension'. Check your autosummary_generate setting. /<>/src/dcmstack/dcmmeta.py:docstring of dcmstack.dcmmeta.NiftiWrapper:36: WARNING: autosummary: stub file not found 'dcmstack.dcmmeta.NiftiWrapper.replace_extension'. Check your autosummary_generate setting. /<>/src/dcmstack/dcmmeta.py:docstring of dcmstack.dcmmeta.NiftiWrapper:36: WARNING: autosummary: stub file not found 'dcmstack.dcmmeta.NiftiWrapper.split'. Check your autosummary_generate setting. /<>/src/dcmstack/dcmmeta.py:docstring of dcmstack.dcmmeta.NiftiWrapper:36: WARNING: autosummary: stub file not found 'dcmstack.dcmmeta.NiftiWrapper.to_filename'. Check your autosummary_generate setting. /<>/src/dcmstack/extract.py:docstring of dcmstack.extract.MetaExtractor:40: WARNING: autosummary: stub file not found 'dcmstack.extract.MetaExtractor.__call__'. Check your autosummary_generate setting. /<>/src/dcmstack/extract.py:docstring of dcmstack.extract.Translator:35: WARNING: autosummary: stub file not found 'dcmstack.extract.Translator.count'. Check your autosummary_generate setting. /<>/src/dcmstack/extract.py:docstring of dcmstack.extract.Translator:35: WARNING: autosummary: stub file not found 'dcmstack.extract.Translator.index'. Check your autosummary_generate setting. looking for now-outdated files... none found pickling environment... done checking consistency... done preparing documents... done writing output... [ 14%] CLI_Tutorial writing output... [ 28%] DcmMeta_Extension writing output... [ 42%] Introduction writing output... [ 57%] Python_Tutorial writing output... [ 71%] dcmstack writing output... [ 85%] index writing output... [100%] modules generating indices... genindex py-modindex done writing additional pages... search done copying static files... done copying extra files... done dumping search index in English (code: en)... done dumping object inventory... done build succeeded, 21 warnings. The HTML pages are in build/html. dh_installdocs install -d debian/python3-dcmstack/usr/share/doc/python3-dcmstack install -d debian/.debhelper/generated/python3-dcmstack cd './build/html/..' && find 'html' \( -type f -or -type l \) -and ! -empty -print0 | LC_ALL=C sort -z | xargs -0 -I {} cp --reflink=auto --parents -dp {} /<>/debian/python3-dcmstack/usr/share/doc/python3-dcmstack chmod -R u\+rw,go=rX debian/python3-dcmstack/usr/share/doc install -p -m0644 debian/copyright debian/python3-dcmstack/usr/share/doc/python3-dcmstack/copyright make[1]: Leaving directory '/<>' dh_sphinxdoc -O--buildsystem=pybuild ln -sf ../../../../javascript/sphinxdoc/1.0/underscore.js debian/python3-dcmstack/usr/share/doc/python3-dcmstack/html/_static/underscore.js ln -sf ../../../../javascript/sphinxdoc/1.0/searchtools.js debian/python3-dcmstack/usr/share/doc/python3-dcmstack/html/_static/searchtools.js ln -sf ../../../../javascript/sphinxdoc/1.0/doctools.js debian/python3-dcmstack/usr/share/doc/python3-dcmstack/html/_static/doctools.js ln -sf ../../../../javascript/sphinxdoc/1.0/sidebar.js debian/python3-dcmstack/usr/share/doc/python3-dcmstack/html/_static/sidebar.js ln -sf ../../../../javascript/sphinxdoc/1.0/language_data.js debian/python3-dcmstack/usr/share/doc/python3-dcmstack/html/_static/language_data.js ln -sf ../../../../javascript/sphinxdoc/1.0/jquery.js debian/python3-dcmstack/usr/share/doc/python3-dcmstack/html/_static/jquery.js rm -rf debian/python3-dcmstack/usr/share/doc/python3-dcmstack/html/.doctrees rm -f debian/python3-dcmstack/usr/share/doc/python3-dcmstack/html/.buildinfo (grep -a -s -v sphinxdoc:Depends debian/python3-dcmstack.substvars; echo "sphinxdoc:Depends=libjs-sphinxdoc (>= 1.0)") > debian/python3-dcmstack.substvars.new mv debian/python3-dcmstack.substvars.new debian/python3-dcmstack.substvars (grep -a -s -v sphinxdoc:Depends debian/python3-dcmstack.substvars; echo "sphinxdoc:Depends=libjs-sphinxdoc (>= 1.0), libjs-sphinxdoc (>= 2.0)") > debian/python3-dcmstack.substvars.new mv debian/python3-dcmstack.substvars.new debian/python3-dcmstack.substvars (grep -a -s -v sphinxdoc:Depends debian/python3-dcmstack.substvars; echo "sphinxdoc:Depends=libjs-sphinxdoc (>= 1.0), libjs-sphinxdoc (>= 1.8), libjs-sphinxdoc (>= 2.0)") > debian/python3-dcmstack.substvars.new mv debian/python3-dcmstack.substvars.new debian/python3-dcmstack.substvars (grep -a -s -v sphinxdoc:Depends debian/python3-dcmstack.substvars; echo "sphinxdoc:Depends=libjs-sphinxdoc (>= 1.0), libjs-sphinxdoc (>= 1.8), libjs-sphinxdoc (>= 2.0), libjs-sphinxdoc (>= 2.4.3-5~)") > debian/python3-dcmstack.substvars.new mv debian/python3-dcmstack.substvars.new debian/python3-dcmstack.substvars (grep -a -s -v sphinxdoc:Built-Using debian/python3-dcmstack.substvars; echo "sphinxdoc:Built-Using=sphinx (= 4.2.0-5)") > debian/python3-dcmstack.substvars.new mv debian/python3-dcmstack.substvars.new debian/python3-dcmstack.substvars dh_installchangelogs -O--buildsystem=pybuild install -p -m0644 debian/changelog debian/python3-dcmstack/usr/share/doc/python3-dcmstack/changelog.Debian dh_installman -O--buildsystem=pybuild install -d debian/python3-dcmstack/usr/share/man/man1/ install -p -m0644 ./debian/man/dcmstack.1 debian/python3-dcmstack/usr/share/man/man1/dcmstack.1 install -p -m0644 ./debian/man/nitool.1 debian/python3-dcmstack/usr/share/man/man1/nitool.1 man-recode --to-code UTF-8 --suffix .dh-new debian/python3-dcmstack/usr/share/man/man1/dcmstack.1 man-recode --to-code UTF-8 --suffix .dh-new debian/python3-dcmstack/usr/share/man/man1/nitool.1 mv debian/python3-dcmstack/usr/share/man/man1/dcmstack.1.dh-new debian/python3-dcmstack/usr/share/man/man1/dcmstack.1 chmod 0644 -- debian/python3-dcmstack/usr/share/man/man1/dcmstack.1 mv debian/python3-dcmstack/usr/share/man/man1/nitool.1.dh-new debian/python3-dcmstack/usr/share/man/man1/nitool.1 chmod 0644 -- debian/python3-dcmstack/usr/share/man/man1/nitool.1 dh_python3 -O--buildsystem=pybuild D: dh_python3 dh_python3:161: version: 5.20211105 D: dh_python3 dh_python3:162: argv: ['/usr/bin/dh_python3', '-O--buildsystem=pybuild'] D: dh_python3 dh_python3:163: options: {'guess_deps': True, 'skip_private': False, 'verbose': False, 'arch': None, 'package': None, 'no_package': None, 'compile_all': False, 'vrange': None, 'regexpr': None, 'accept_upstream_versions': False, 'depends': None, 'depends_section': None, 'recommends': None, 'recommends_section': None, 'suggests': None, 'suggests_section': None, 'requires': None, 'shebang': None, 'ignore_shebangs': False, 'clean_dbg_pkg': True, 'no_ext_rename': False, 'no_shebang_rewrite': False, 'O': '--buildsystem=pybuild'} D: dh_python3 dh_python3:164: args: [] D: dh_python3 dh_python3:165: supported Python versions: 3.9,3.10 (default=3.9) D: dh_python3 debhelper:157: source=dcmstack, binary packages=['python3-dcmstack'] D: dh_python3 dh_python3:183: processing package python3-dcmstack... D: dh_python3 fs:49: moving files from debian/python3-dcmstack/usr/lib/python3.9/dist-packages to debian/python3-dcmstack/usr/lib/python3/dist-packages/ D: dh_python3 fs:49: moving files from debian/python3-dcmstack/usr/lib/python3.10/dist-packages to debian/python3-dcmstack/usr/lib/python3/dist-packages/ D: dh_python3 fs:265: package python3-dcmstack details = {'requires.txt': {'debian/python3-dcmstack/usr/lib/python3/dist-packages/dcmstack-0.8.0.egg-info/requires.txt'}, 'egg-info': set(), 'dist-info': set(), 'nsp.txt': set(), 'shebangs': {/usr/bin/python3, /usr/bin/python3}, 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': set(), 'ext_no_version': set()} D: dh_python3 depends:118: generating dependencies for package python3-dcmstack D: dh_python3 pydist:142: trying to find dependency for nibabel>=2.1.0 (python=None) D: dh_python3 pydist:142: trying to find dependency for pydicom>=0.9.7 (python=None) D: dh_python3 depends:282: D={'python3-pydicom', 'python3:any', 'python3-nibabel'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild rm -f debian/python3-dcmstack/usr/share/doc/python3-dcmstack/html/_static/sidebar.js ln -s ../../../../javascript/sphinxdoc/1.0/sidebar.js debian/python3-dcmstack/usr/share/doc/python3-dcmstack/html/_static/sidebar.js rm -f debian/python3-dcmstack/usr/share/doc/python3-dcmstack/html/_static/underscore.js ln -s ../../../../javascript/sphinxdoc/1.0/underscore.js debian/python3-dcmstack/usr/share/doc/python3-dcmstack/html/_static/underscore.js rm -f debian/python3-dcmstack/usr/share/doc/python3-dcmstack/html/_static/doctools.js ln -s ../../../../javascript/sphinxdoc/1.0/doctools.js debian/python3-dcmstack/usr/share/doc/python3-dcmstack/html/_static/doctools.js rm -f debian/python3-dcmstack/usr/share/doc/python3-dcmstack/html/_static/language_data.js ln -s ../../../../javascript/sphinxdoc/1.0/language_data.js debian/python3-dcmstack/usr/share/doc/python3-dcmstack/html/_static/language_data.js rm -f debian/python3-dcmstack/usr/share/doc/python3-dcmstack/html/_static/jquery.js ln -s ../../../../javascript/sphinxdoc/1.0/jquery.js debian/python3-dcmstack/usr/share/doc/python3-dcmstack/html/_static/jquery.js rm -f debian/python3-dcmstack/usr/share/doc/python3-dcmstack/html/_static/searchtools.js ln -s ../../../../javascript/sphinxdoc/1.0/searchtools.js debian/python3-dcmstack/usr/share/doc/python3-dcmstack/html/_static/searchtools.js dh_strip_nondeterminism -O--buildsystem=pybuild Using 1636743124 as canonical time Normalizing debian/python3-dcmstack/usr/share/doc/python3-dcmstack/html/_static/file.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-dcmstack/usr/share/doc/python3-dcmstack/html/_static/minus.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-dcmstack/usr/share/doc/python3-dcmstack/html/_static/plus.png using File::StripNondeterminism::handlers::png dh_compress -O--buildsystem=pybuild cd debian/python3-dcmstack chmod a-x usr/share/doc/python3-dcmstack/changelog.Debian usr/share/man/man1/dcmstack.1 usr/share/man/man1/nitool.1 gzip -9nf usr/share/doc/python3-dcmstack/changelog.Debian usr/share/man/man1/dcmstack.1 usr/share/man/man1/nitool.1 cd '/<>' dh_fixperms -O--buildsystem=pybuild find debian/python3-dcmstack ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python3-dcmstack/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-dcmstack/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-dcmstack/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-dcmstack/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-dcmstack -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-dcmstack/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/python3-dcmstack/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild install -d debian/python3-dcmstack/DEBIAN printf '#!/bin/sh\nset -e\n' > debian/python3-dcmstack/DEBIAN/postinst cat debian/python3-dcmstack.postinst.debhelper >> debian/python3-dcmstack/DEBIAN/postinst chmod 0755 -- debian/python3-dcmstack/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python3-dcmstack/DEBIAN/prerm cat debian/python3-dcmstack.prerm.debhelper >> debian/python3-dcmstack/DEBIAN/prerm chmod 0755 -- debian/python3-dcmstack/DEBIAN/prerm dh_gencontrol -O--buildsystem=pybuild echo misc:Depends= >> debian/python3-dcmstack.substvars echo misc:Pre-Depends= >> debian/python3-dcmstack.substvars dpkg-gencontrol -ppython3-dcmstack -ldebian/changelog -Tdebian/python3-dcmstack.substvars -Pdebian/python3-dcmstack dpkg-gencontrol: warning: Provides field of package python3-dcmstack: substitution variable ${python3:Provides} used, but is not defined dpkg-gencontrol: warning: package python3-dcmstack: substitution variable ${sphinxdoc:Built-Using} unused, but is defined chmod 0644 -- debian/python3-dcmstack/DEBIAN/control dh_md5sums -O--buildsystem=pybuild cd debian/python3-dcmstack >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/python3-dcmstack/DEBIAN/md5sums dh_builddeb -O--buildsystem=pybuild dpkg-deb --root-owner-group --build debian/python3-dcmstack .. INFO: pkgstriptranslations version 149 pkgstriptranslations: processing python3-dcmstack (in debian/python3-dcmstack); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/python3-dcmstack/DEBIAN/control, package python3-dcmstack, directory debian/python3-dcmstack pkgstripfiles: Running PNG optimization (using 4 cpus) for package python3-dcmstack ... xargs: warning: options --max-lines and --replace/-I/-i are mutually exclusive, ignoring previous --max-lines value ... pkgstripfiles: PNG optimization (0/0) for package python3-dcmstack took 0 s dpkg-deb: building package 'python3-dcmstack' in '../python3-dcmstack_0.8-3_all.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary -mLaunchpad Build Daemon >../dcmstack_0.8-3_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2021-11-12T23:20:01Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ dcmstack_0.8-3_amd64.changes: ----------------------------- Format: 1.8 Date: Sat, 13 Nov 2021 00:22:04 +0530 Source: dcmstack Binary: python3-dcmstack Built-For-Profiles: noudeb Architecture: all Version: 0.8-3 Distribution: jammy-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Nilesh Patra Description: python3-dcmstack - DICOM to NIfTI conversion - python3 package Changes: dcmstack (0.8-3) unstable; urgency=medium . [ Andreas Tille ] * Team upload. * Standardize repository to Debian Med policy and remove debian/gbp.conf * Move repository to Debian Med team Salsa space * Maintain package in Debian Med team * Fix watch file * Standards-Version: 4.6.0 (routine-update) * debhelper-compat 13 (routine-update) * Secure URI in copyright format (routine-update) * Cleanup d/rules * Do not parse d/changelog (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) * Remove unnecessary 'Testsuite: autopkgtest' header. * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. . [ Nilesh Patra ] * Add patch to move tests from using nose->pytest * Add B-D on pytest instead of nose * Fix autopkgtests * Improve autopkgtests: run in AUTOPKGTEST_TMP instead of source root to ensure they work * Avoid generating manpage during build, rather maintain them as maintainer manuals Checksums-Sha1: 1a2d449b34b216f894fc4f4fdf85b7629ebce8e0 7996 dcmstack_0.8-3_amd64.buildinfo 33959afe66254315e304a1515f399d3219320ae4 77940 python3-dcmstack_0.8-3_all.deb Checksums-Sha256: 871b32592598dfb93305013abb9f49ebf8b90076cedfd51b093c6404a3c9d6f0 7996 dcmstack_0.8-3_amd64.buildinfo 7de9ddf7347f76a709952187388bead34dd3205956adfc718e65b43daf6c4ae1 77940 python3-dcmstack_0.8-3_all.deb Files: 32836f696bea7c7adaddf52c78ee82da 7996 science optional dcmstack_0.8-3_amd64.buildinfo 341b1cc5bc605a67ae2eaf9ddb6073ba 77940 science optional python3-dcmstack_0.8-3_all.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: dcmstack Binary: python3-dcmstack Architecture: all Version: 0.8-3 Checksums-Md5: 341b1cc5bc605a67ae2eaf9ddb6073ba 77940 python3-dcmstack_0.8-3_all.deb Checksums-Sha1: 33959afe66254315e304a1515f399d3219320ae4 77940 python3-dcmstack_0.8-3_all.deb Checksums-Sha256: 7de9ddf7347f76a709952187388bead34dd3205956adfc718e65b43daf6c4ae1 77940 python3-dcmstack_0.8-3_all.deb Build-Origin: Ubuntu Build-Architecture: amd64 Build-Date: Fri, 12 Nov 2021 23:20:00 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs usr-local-has-programs Installed-Build-Depends: autoconf (= 2.71-2), automake (= 1:1.16.5-1ubuntu1), autopoint (= 0.21-4ubuntu3), autotools-dev (= 20180224.1+nmu1), base-files (= 12ubuntu2), base-passwd (= 3.5.52), bash (= 5.1-3ubuntu2), binutils (= 2.37-7ubuntu1), binutils-common (= 2.37-7ubuntu1), binutils-x86-64-linux-gnu (= 2.37-7ubuntu1), bsdextrautils (= 2.37.2-4ubuntu1), bsdutils (= 1:2.37.2-4ubuntu1), build-essential (= 12.9ubuntu2), bzip2 (= 1.0.8-4ubuntu4), ca-certificates (= 20211016), coreutils (= 8.32-4ubuntu3), cpp (= 4:11.2.0-1ubuntu1), cpp-11 (= 11.2.0-10ubuntu1), dash (= 0.5.11+git20210903+057cd650a4ed-3), debconf (= 1.5.79), debhelper (= 13.5.2ubuntu1), debianutils (= 5.5-1), debugedit (= 1:5.0-0ubuntu2), dh-autoreconf (= 20), dh-python (= 5.20211105), dh-strip-nondeterminism (= 1.12.0-2), diffutils (= 1:3.8-0ubuntu1), docutils-common (= 0.17.1+dfsg-2), dpkg (= 1.20.9ubuntu2), dpkg-dev (= 1.20.9ubuntu2), dwz (= 0.14-1build1), file (= 1:5.39-3build1), findutils (= 4.8.0-1ubuntu2), g++ (= 4:11.2.0-1ubuntu1), g++-11 (= 11.2.0-10ubuntu1), gcc (= 4:11.2.0-1ubuntu1), gcc-11 (= 11.2.0-10ubuntu1), gcc-11-base (= 11.2.0-10ubuntu1), gettext (= 0.21-4ubuntu3), gettext-base (= 0.21-4ubuntu3), grep (= 3.7-1), groff-base (= 1.22.4-7), gzip (= 1.10-4ubuntu2), hostname (= 3.23ubuntu1), init-system-helpers (= 1.60build1), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-10ubuntu2), libarchive-zip-perl (= 1.68-1), libasan6 (= 11.2.0-10ubuntu1), libatomic1 (= 11.2.0-10ubuntu1), libattr1 (= 1:2.5.1-1), libaudit-common (= 1:3.0-2ubuntu3), libaudit1 (= 1:3.0-2ubuntu3), libbinutils (= 2.37-7ubuntu1), libblas3 (= 3.9.0-3ubuntu3), libblkid1 (= 2.37.2-4ubuntu1), libbsd0 (= 0.11.3-1ubuntu3), libbz2-1.0 (= 1.0.8-4ubuntu4), libc-bin (= 2.34-0ubuntu3), libc-dev-bin (= 2.34-0ubuntu3), libc6 (= 2.34-0ubuntu3), libc6-dev (= 2.34-0ubuntu3), libcap-ng0 (= 0.7.9-2.2build2), libcap2 (= 1:2.44-1build2), libcc1-0 (= 11.2.0-10ubuntu1), libcom-err2 (= 1.46.4-1ubuntu1), libcrypt-dev (= 1:4.4.26-1), libcrypt1 (= 1:4.4.26-1), libctf-nobfd0 (= 2.37-7ubuntu1), libctf0 (= 2.37-7ubuntu1), libdb5.3 (= 5.3.28+dfsg1-0.8ubuntu2), libdebconfclient0 (= 0.256ubuntu4), libdebhelper-perl (= 13.5.2ubuntu1), libdpkg-perl (= 1.20.9ubuntu2), libdw1 (= 0.185-2), libedit2 (= 3.1-20210910-1), libelf1 (= 0.185-2), libexpat1 (= 2.4.1-3), libffi8 (= 3.4.2-1ubuntu5), libfile-stripnondeterminism-perl (= 1.12.0-2), libgcc-11-dev (= 11.2.0-10ubuntu1), libgcc-s1 (= 11.2.0-10ubuntu1), libgcrypt20 (= 1.9.4-3ubuntu2), libgdbm-compat4 (= 1.22-1), libgdbm6 (= 1.22-1), libgfortran5 (= 11.2.0-10ubuntu1), libgmp10 (= 2:6.2.1+dfsg-1ubuntu3), libgomp1 (= 11.2.0-10ubuntu1), libgpg-error0 (= 1.42-3), libgssapi-krb5-2 (= 1.18.3-7), libicu67 (= 67.1-7ubuntu1), libisl23 (= 0.24-2), libitm1 (= 11.2.0-10ubuntu1), libjs-jquery (= 3.5.1+dfsg+~3.5.5-8), libjs-sphinxdoc (= 4.2.0-5), libjs-underscore (= 1.9.1~dfsg-4), libk5crypto3 (= 1.18.3-7), libkeyutils1 (= 1.6.1-2ubuntu2), libkrb5-3 (= 1.18.3-7), libkrb5support0 (= 1.18.3-7), liblapack3 (= 3.9.0-3ubuntu3), liblbfgsb0 (= 3.0+dfsg.3-9), liblsan0 (= 11.2.0-10ubuntu1), liblz4-1 (= 1.9.3-2build1), liblzma5 (= 5.2.5-2build1), libmagic-mgc (= 1:5.39-3build1), libmagic1 (= 1:5.39-3build1), libmd0 (= 1.0.4-1), libmount1 (= 2.37.2-4ubuntu1), libmpc3 (= 1.2.1-1), libmpdec3 (= 2.5.1-2build1), libmpfr6 (= 4.1.0-3build2), libncursesw6 (= 6.2+20210905-1), libnsl-dev (= 1.3.0-2build1), libnsl2 (= 1.3.0-2build1), libpam-modules (= 1.4.0-10ubuntu1), libpam-modules-bin (= 1.4.0-10ubuntu1), libpam-runtime (= 1.4.0-10ubuntu1), libpam0g (= 1.4.0-10ubuntu1), libpcre2-8-0 (= 10.37-0ubuntu2), libpcre3 (= 2:8.39-13build4), libperl5.32 (= 5.32.1-3ubuntu3), libpipeline1 (= 1.5.4-1), libpython3-stdlib (= 3.9.7-4), libpython3.10-minimal (= 3.10.0-4), libpython3.10-stdlib (= 3.10.0-4), libpython3.9-minimal (= 3.9.8-2), libpython3.9-stdlib (= 3.9.8-2), libquadmath0 (= 11.2.0-10ubuntu1), libreadline8 (= 8.1-2build1), libseccomp2 (= 2.5.2-2ubuntu2), libselinux1 (= 3.1-3build3), libsigsegv2 (= 2.13-1ubuntu2), libsmartcols1 (= 2.37.2-4ubuntu1), libsqlite3-0 (= 3.36.0-2), libssl1.1 (= 1.1.1l-1ubuntu1), libstdc++-11-dev (= 11.2.0-10ubuntu1), libstdc++6 (= 11.2.0-10ubuntu1), libsub-override-perl (= 0.09-2), libsystemd0 (= 248.3-1ubuntu8), libtinfo6 (= 6.2+20210905-1), libtirpc-common (= 1.3.2-2), libtirpc-dev (= 1.3.2-2), libtirpc3 (= 1.3.2-2), libtool (= 2.4.6-15build1), libtsan0 (= 11.2.0-10ubuntu1), libubsan1 (= 11.2.0-10ubuntu1), libuchardet0 (= 0.0.7-1build1), libudev1 (= 248.3-1ubuntu8), libunistring2 (= 0.9.10-6), libuuid1 (= 2.37.2-4ubuntu1), libxml2 (= 2.9.12+dfsg-5), libzstd1 (= 1.4.8+dfsg-3), linux-libc-dev (= 5.13.0-19.19), login (= 1:4.8.1-1ubuntu9), lsb-base (= 11.1.0ubuntu3), lto-disabled-list (= 16), m4 (= 1.4.18-5ubuntu1), mailcap (= 3.70ubuntu1), make (= 4.3-4ubuntu2), man-db (= 2.9.4-2build1), mawk (= 1.3.4.20200120-2build1), media-types (= 4.0.0), mime-support (= 3.66), ncurses-base (= 6.2+20210905-1), ncurses-bin (= 6.2+20210905-1), openssl (= 1.1.1l-1ubuntu1), patch (= 2.7.6-7build1), perl (= 5.32.1-3ubuntu3), perl-base (= 5.32.1-3ubuntu3), perl-modules-5.32 (= 5.32.1-3ubuntu3), po-debconf (= 1.0.21+nmu1), python-babel-localedata (= 2.8.0+dfsg.1-7), python3 (= 3.9.7-4), python3-alabaster (= 0.7.12-1), python3-all (= 3.9.7-4), python3-attr (= 20.3.0-1), python3-babel (= 2.8.0+dfsg.1-7), python3-certifi (= 2020.6.20-1), python3-chardet (= 4.0.0-1), python3-decorator (= 4.4.2-0ubuntu1), python3-dicom (= 2.0.0-2), python3-distutils (= 3.9.8-1), python3-docutils (= 0.17.1+dfsg-2), python3-idna (= 2.10-1), python3-imagesize (= 1.2.0-2), python3-importlib-metadata (= 4.6.4-1), python3-iniconfig (= 1.1.1-1), python3-jinja2 (= 3.0.1-2), python3-lib2to3 (= 3.9.8-1), python3-markupsafe (= 2.0.1-2), python3-minimal (= 3.9.7-4), python3-mock (= 4.0.3-1), python3-more-itertools (= 8.10.0-2), python3-nibabel (= 3.2.1-2), python3-numpy (= 1:1.20.2-1ubuntu1), python3-numpydoc (= 1.1.0-3), python3-packaging (= 21.0-1), python3-pbr (= 5.6.0-0ubuntu1), python3-pkg-resources (= 58.2.0-1), python3-pluggy (= 0.13.0-7.1), python3-py (= 1.10.0-1), python3-pydicom (= 2.0.0-2), python3-pygments (= 2.7.1+dfsg-2.1), python3-pyparsing (= 2.4.7-1), python3-pytest (= 6.2.5-1ubuntu1), python3-requests (= 2.25.1+dfsg-2), python3-roman (= 3.3-1), python3-scipy (= 1.7.1-1ubuntu1), python3-setuptools (= 58.2.0-1), python3-six (= 1.16.0-2), python3-snowballstemmer (= 2.1.0-2), python3-sphinx (= 4.2.0-5), python3-toml (= 0.10.2-1), python3-tz (= 2021.3-1), python3-urllib3 (= 1.26.5-1~exp1), python3-zipp (= 1.0.0-3), python3.10 (= 3.10.0-4), python3.10-minimal (= 3.10.0-4), python3.9 (= 3.9.8-2), python3.9-minimal (= 3.9.8-2), readline-common (= 8.1-2build1), rpcsvc-proto (= 1.4.2-0ubuntu5), sed (= 4.8-1), sensible-utils (= 0.0.17), sgml-base (= 1.30), sphinx-common (= 4.2.0-5), sysvinit-utils (= 2.96-7ubuntu2), tar (= 1.34+dfsg-1build2), tzdata (= 2021e-1ubuntu1), util-linux (= 2.37.2-4ubuntu1), xml-core (= 0.18+nmu1), xz-utils (= 5.2.5-2build1), zlib1g (= 1:1.2.11.dfsg-2ubuntu7) Environment: DEB_BUILD_OPTIONS="parallel=4" DEB_BUILD_PROFILES="noudeb" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1636743124" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ python3-dcmstack_0.8-3_all.deb ------------------------------ new Debian package, version 2.0. size 77940 bytes: control archive=2322 bytes. 806 bytes, 18 lines control 4027 bytes, 46 lines md5sums 257 bytes, 12 lines * postinst #!/bin/sh 406 bytes, 12 lines * prerm #!/bin/sh Package: python3-dcmstack Source: dcmstack Version: 0.8-3 Architecture: all Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 521 Depends: python3-dicom, python3-nibabel, python3-numpy, python3-pydicom, python3:any, libjs-sphinxdoc (>= 2.4.3-5~) Conflicts: python-dcmstack Section: science Priority: optional Homepage: https://github.com/moloney/dcmstack Description: DICOM to NIfTI conversion - python3 package DICOM to NIfTI conversion with the added ability to extract and summarize meta data from the source DICOMs. The meta data can be injected into a NIfTI header extension or written out as a JSON formatted text file. . This package provides the Python3 package. drwxr-xr-x root/root 0 2021-11-12 18:52 ./ drwxr-xr-x root/root 0 2021-11-12 18:52 ./usr/ drwxr-xr-x root/root 0 2021-11-12 18:52 ./usr/bin/ -rwxr-xr-x root/root 963 2021-11-12 18:52 ./usr/bin/dcmstack -rwxr-xr-x root/root 959 2021-11-12 18:52 ./usr/bin/nitool drwxr-xr-x root/root 0 2021-11-12 18:52 ./usr/lib/ drwxr-xr-x root/root 0 2021-11-12 18:52 ./usr/lib/python3/ drwxr-xr-x root/root 0 2021-11-12 18:52 ./usr/lib/python3/dist-packages/ drwxr-xr-x root/root 0 2021-11-12 18:52 ./usr/lib/python3/dist-packages/dcmstack-0.8.0.egg-info/ -rw-r--r-- root/root 727 2021-11-12 18:52 ./usr/lib/python3/dist-packages/dcmstack-0.8.0.egg-info/PKG-INFO -rw-r--r-- root/root 1 2021-11-12 18:52 ./usr/lib/python3/dist-packages/dcmstack-0.8.0.egg-info/dependency_links.txt -rw-r--r-- root/root 91 2021-11-12 18:52 ./usr/lib/python3/dist-packages/dcmstack-0.8.0.egg-info/entry_points.txt -rw-r--r-- root/root 38 2021-11-12 18:52 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./usr/lib/python3/dist-packages/dcmstack/utils.py drwxr-xr-x root/root 0 2021-11-12 18:52 ./usr/share/ drwxr-xr-x root/root 0 2021-11-12 18:52 ./usr/share/doc/ drwxr-xr-x root/root 0 2021-11-12 18:52 ./usr/share/doc/python3-dcmstack/ -rw-r--r-- root/root 1308 2021-11-12 18:52 ./usr/share/doc/python3-dcmstack/changelog.Debian.gz -rw-r--r-- root/root 1430 2021-11-12 14:33 ./usr/share/doc/python3-dcmstack/copyright drwxr-xr-x root/root 0 2021-11-12 18:52 ./usr/share/doc/python3-dcmstack/html/ -rw-r--r-- root/root 16354 2021-11-12 18:52 ./usr/share/doc/python3-dcmstack/html/CLI_Tutorial.html -rw-r--r-- root/root 46452 2021-11-12 18:52 ./usr/share/doc/python3-dcmstack/html/DcmMeta_Extension.html -rw-r--r-- root/root 11575 2021-11-12 18:52 ./usr/share/doc/python3-dcmstack/html/Introduction.html -rw-r--r-- root/root 25825 2021-11-12 18:52 ./usr/share/doc/python3-dcmstack/html/Python_Tutorial.html drwxr-xr-x root/root 0 2021-11-12 18:52 ./usr/share/doc/python3-dcmstack/html/_sources/ 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-rw-r--r-- root/root 1060 2021-11-12 18:52 ./usr/share/doc/python3-dcmstack/html/objects.inv -rw-r--r-- root/root 4395 2021-11-12 18:52 ./usr/share/doc/python3-dcmstack/html/py-modindex.html -rw-r--r-- root/root 3363 2021-11-12 18:52 ./usr/share/doc/python3-dcmstack/html/search.html -rw-r--r-- root/root 17330 2021-11-12 18:52 ./usr/share/doc/python3-dcmstack/html/searchindex.js drwxr-xr-x root/root 0 2021-11-12 18:52 ./usr/share/man/ drwxr-xr-x root/root 0 2021-11-12 18:52 ./usr/share/man/man1/ -rw-r--r-- root/root 1967 2021-11-12 18:52 ./usr/share/man/man1/dcmstack.1.gz -rw-r--r-- root/root 605 2021-11-12 18:52 ./usr/share/man/man1/nitool.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: binary Build-Space: n/a Build-Time: 34 Distribution: jammy-proposed Host Architecture: amd64 Install-Time: 90 Job: dcmstack_0.8-3.dsc Machine Architecture: amd64 Package: dcmstack Package-Time: 126 Source-Version: 0.8-3 Space: n/a Status: successful Version: 0.8-3 -------------------------------------------------------------------------------- Finished at 2021-11-12T23:20:01Z Build needed 00:02:06, no disk space Adding user buildd to group lxd RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=jammy --arch=amd64 PACKAGEBUILD-22405151 Scanning for processes to kill in build PACKAGEBUILD-22405151