https://launchpad.net/ubuntu/+source/delly/1.1.8-1build1/+build/27576347 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-s390x-014 5.4.0-169-generic #187-Ubuntu SMP Thu Nov 23 14:52:16 UTC 2023 s390x Buildd toolchain package versions: launchpad-buildd_235~645~ubuntu20.04.1 python3-lpbuildd_235~645~ubuntu20.04.1 sbuild_0.79.0-1ubuntu1 git-build-recipe_0.3.6 git_1:2.25.1-1ubuntu3.11 dpkg-dev_1.19.7ubuntu3.2 python3-debian_0.1.36ubuntu1.1. Syncing the system clock with the buildd NTP service... 19 Dec 19:35:23 ntpdate[1902]: adjust time server 10.211.37.1 offset 0.014791 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=noble --arch=s390x PACKAGEBUILD-27576347 --image-type chroot /home/buildd/filecache-default/c23f799bb684944311373fdcead5a58221fa6ef7 Creating target for build PACKAGEBUILD-27576347 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=noble --arch=s390x PACKAGEBUILD-27576347 Starting target for build PACKAGEBUILD-27576347 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=noble --arch=s390x PACKAGEBUILD-27576347 'deb http://ftpmaster.internal/ubuntu noble main universe' 'deb http://ftpmaster.internal/ubuntu noble-security main universe' 'deb http://ftpmaster.internal/ubuntu noble-updates main universe' 'deb http://ftpmaster.internal/ubuntu noble-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-27576347 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=noble --arch=s390x PACKAGEBUILD-27576347 Updating target for build PACKAGEBUILD-27576347 Get:1 http://ftpmaster.internal/ubuntu noble InRelease [240 kB] Get:2 http://ftpmaster.internal/ubuntu noble-security InRelease [74.9 kB] Get:3 http://ftpmaster.internal/ubuntu noble-updates InRelease [74.9 kB] Get:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease [102 kB] Get:5 http://ftpmaster.internal/ubuntu noble/main s390x Packages [1337 kB] Get:6 http://ftpmaster.internal/ubuntu noble/main Translation-en [515 kB] Get:7 http://ftpmaster.internal/ubuntu noble/universe s390x Packages [14.6 MB] Get:8 http://ftpmaster.internal/ubuntu noble/universe Translation-en [6031 kB] Get:9 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [90.6 kB] Get:10 http://ftpmaster.internal/ubuntu noble-proposed/main Translation-en [43.5 kB] Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [1100 kB] Get:12 http://ftpmaster.internal/ubuntu noble-proposed/universe Translation-en [393 kB] Fetched 24.6 MB in 17s (1451 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following package was automatically installed and is no longer required: libunistring2 Use 'sudo apt autoremove' to remove it. The following NEW packages will be installed: libunistring5 The following packages will be upgraded: apt apt-utils base-files base-passwd bash bash-completion binutils binutils-common binutils-s390x-linux-gnu bsdextrautils bsdutils coreutils cpp cpp-13 debianutils diffutils dpkg dpkg-dev fakeroot g++ g++-13 gcc gcc-13 gcc-13-base grep init init-system-helpers krb5-locales libapparmor1 libapt-pkg6.0 libargon2-1 libasan8 libatomic1 libaudit-common libaudit1 libbinutils libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcc1-0 libcryptsetup12 libctf-nobfd0 libctf0 libdb5.3 libdebconfclient0 libdpkg-perl libfakeroot libfdisk1 libffi8 libgcc-13-dev libgcc-s1 libgdbm-compat4 libgdbm6 libgnutls30 libgomp1 libgpg-error-l10n libgpg-error0 libgssapi-krb5-2 libidn2-0 libitm1 libk5crypto3 libkmod2 libkrb5-3 libkrb5support0 liblzma5 libmount1 libncursesw6 libnsl-dev libnsl2 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpcre2-8-0 libperl5.36 libpng16-16 libproc2-0 libreadline8 libseccomp2 libselinux1 libsemanage-common libsemanage2 libsepol2 libsframe1 libsmartcols1 libsqlite3-0 libssl3 libstdc++-13-dev libstdc++6 libsystemd-shared libsystemd0 libtinfo6 libtirpc-common libtirpc-dev libtirpc3 libubsan1 libudev1 libuuid1 libxxhash0 libzstd1 linux-libc-dev login lto-disabled-list mawk mount ncurses-base ncurses-bin openssl optipng passwd perl perl-base perl-modules-5.36 pinentry-curses procps readline-common systemd systemd-dev systemd-sysv sysvinit-utils tar ubuntu-keyring util-linux uuid-runtime xz-utils zlib1g 130 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 95.5 MB of archives. After this operation, 7503 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu noble/main s390x libnsl-dev s390x 1.3.0-3 [73.5 kB] Get:2 http://ftpmaster.internal/ubuntu noble/main s390x libc6-dev s390x 2.38-3ubuntu1 [1626 kB] Get:3 http://ftpmaster.internal/ubuntu noble/main s390x libc-dev-bin s390x 2.38-3ubuntu1 [20.0 kB] Get:4 http://ftpmaster.internal/ubuntu noble/main s390x libtirpc-common all 1.3.4+ds-1 [7920 B] Get:5 http://ftpmaster.internal/ubuntu noble/main s390x libtirpc-dev s390x 1.3.4+ds-1 [196 kB] Get:6 http://ftpmaster.internal/ubuntu noble/main s390x libgssapi-krb5-2 s390x 1.20.1-5build1 [146 kB] Get:7 http://ftpmaster.internal/ubuntu noble/main s390x libkrb5-3 s390x 1.20.1-5build1 [354 kB] Get:8 http://ftpmaster.internal/ubuntu noble/main s390x libk5crypto3 s390x 1.20.1-5build1 [89.1 kB] Get:9 http://ftpmaster.internal/ubuntu noble/main s390x libkrb5support0 s390x 1.20.1-5build1 [34.1 kB] Get:10 http://ftpmaster.internal/ubuntu noble/main s390x libssl3 s390x 3.0.10-1ubuntu3 [1625 kB] Get:11 http://ftpmaster.internal/ubuntu noble/main s390x libtirpc3 s390x 1.3.4+ds-1 [84.8 kB] Get:12 http://ftpmaster.internal/ubuntu noble/main s390x libnsl2 s390x 1.3.0-3 [44.4 kB] Get:13 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-libc-dev s390x 6.6.0-14.14 [1576 kB] Get:14 http://ftpmaster.internal/ubuntu noble/main s390x libcc1-0 s390x 13.2.0-9ubuntu1 [50.1 kB] Get:15 http://ftpmaster.internal/ubuntu noble/main s390x libctf0 s390x 2.41.50.20231214-1ubuntu1 [84.0 kB] Get:16 http://ftpmaster.internal/ubuntu noble/main s390x libctf-nobfd0 s390x 2.41.50.20231214-1ubuntu1 [88.1 kB] Get:17 http://ftpmaster.internal/ubuntu noble/main s390x binutils-s390x-linux-gnu s390x 2.41.50.20231214-1ubuntu1 [2387 kB] Get:18 http://ftpmaster.internal/ubuntu noble/main s390x libbinutils s390x 2.41.50.20231214-1ubuntu1 [421 kB] Get:19 http://ftpmaster.internal/ubuntu noble/main s390x binutils-common s390x 2.41.50.20231214-1ubuntu1 [230 kB] Get:20 http://ftpmaster.internal/ubuntu noble/main s390x binutils s390x 2.41.50.20231214-1ubuntu1 [3062 B] Get:21 http://ftpmaster.internal/ubuntu noble/main s390x gcc-13-base s390x 13.2.0-9ubuntu1 [45.2 kB] Get:22 http://ftpmaster.internal/ubuntu noble/main s390x libgcc-s1 s390x 13.2.0-9ubuntu1 [35.9 kB] Get:23 http://ftpmaster.internal/ubuntu noble/main s390x libgomp1 s390x 13.2.0-9ubuntu1 [146 kB] Get:24 http://ftpmaster.internal/ubuntu noble/main s390x libitm1 s390x 13.2.0-9ubuntu1 [31.3 kB] Get:25 http://ftpmaster.internal/ubuntu noble/main s390x libatomic1 s390x 13.2.0-9ubuntu1 [9382 B] Get:26 http://ftpmaster.internal/ubuntu noble/main s390x libasan8 s390x 13.2.0-9ubuntu1 [2852 kB] Get:27 http://ftpmaster.internal/ubuntu noble/main s390x libubsan1 s390x 13.2.0-9ubuntu1 [1112 kB] Get:28 http://ftpmaster.internal/ubuntu noble/main s390x g++-13 s390x 13.2.0-9ubuntu1 [10.2 MB] Get:29 http://ftpmaster.internal/ubuntu noble/main s390x libstdc++-13-dev s390x 13.2.0-9ubuntu1 [2426 kB] Get:30 http://ftpmaster.internal/ubuntu noble/main s390x libgcc-13-dev s390x 13.2.0-9ubuntu1 [1003 kB] Get:31 http://ftpmaster.internal/ubuntu noble/main s390x gcc-13 s390x 13.2.0-9ubuntu1 [17.6 MB] Get:32 http://ftpmaster.internal/ubuntu noble/main s390x cpp-13 s390x 13.2.0-9ubuntu1 [8794 kB] Get:33 http://ftpmaster.internal/ubuntu noble/main s390x libstdc++6 s390x 13.2.0-9ubuntu1 [875 kB] Get:34 http://ftpmaster.internal/ubuntu noble-proposed/main s390x zlib1g s390x 1:1.3.dfsg-3ubuntu1 [75.3 kB] Get:35 http://ftpmaster.internal/ubuntu noble/main s390x libsframe1 s390x 2.41.50.20231214-1ubuntu1 [13.1 kB] Get:36 http://ftpmaster.internal/ubuntu noble/main s390x libzstd1 s390x 1.5.5+dfsg2-2 [336 kB] Get:37 http://ftpmaster.internal/ubuntu noble/main s390x libc6 s390x 2.38-3ubuntu1 [2839 kB] Get:38 http://ftpmaster.internal/ubuntu noble/main s390x base-files s390x 13ubuntu5 [73.6 kB] Get:39 http://ftpmaster.internal/ubuntu noble/main s390x debianutils s390x 5.14 [89.3 kB] Get:40 http://ftpmaster.internal/ubuntu noble/main s390x bash s390x 5.2.21-2ubuntu1 [855 kB] Get:41 http://ftpmaster.internal/ubuntu noble/main s390x bsdutils s390x 1:2.39.2-6ubuntu1 [95.2 kB] Get:42 http://ftpmaster.internal/ubuntu noble/main s390x coreutils s390x 9.4-2ubuntu1 [1501 kB] Get:43 http://ftpmaster.internal/ubuntu noble/main s390x diffutils s390x 1:3.10-1 [187 kB] Get:44 http://ftpmaster.internal/ubuntu noble/main s390x liblzma5 s390x 5.4.5-0.1 [133 kB] Get:45 http://ftpmaster.internal/ubuntu noble/main s390x libapparmor1 s390x 4.0.0~alpha2-0ubuntu7 [49.6 kB] Get:46 http://ftpmaster.internal/ubuntu noble/main s390x libaudit-common all 1:3.1.2-1 [5512 B] Get:47 http://ftpmaster.internal/ubuntu noble/main s390x libcap-ng0 s390x 0.8.3-3 [15.7 kB] Get:48 http://ftpmaster.internal/ubuntu noble/main s390x libaudit1 s390x 1:3.1.2-1 [48.7 kB] Get:49 http://ftpmaster.internal/ubuntu noble/main s390x libblkid1 s390x 2.39.2-6ubuntu1 [126 kB] Get:50 http://ftpmaster.internal/ubuntu noble/main s390x libkmod2 s390x 30+20230601-2ubuntu1 [54.5 kB] Get:51 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-8-0 s390x 10.42-4ubuntu1 [243 kB] Get:52 http://ftpmaster.internal/ubuntu noble/main s390x libselinux1 s390x 3.5-1build2 [83.5 kB] Get:53 http://ftpmaster.internal/ubuntu noble/main s390x libmount1 s390x 2.39.2-6ubuntu1 [137 kB] Get:54 http://ftpmaster.internal/ubuntu noble/main s390x libpam0g s390x 1.5.2-9.1ubuntu1 [66.0 kB] Get:55 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libseccomp2 s390x 2.5.4-2ubuntu1 [52.2 kB] Get:56 http://ftpmaster.internal/ubuntu noble-proposed/main s390x systemd-sysv s390x 255-1ubuntu1 [11.7 kB] Get:57 http://ftpmaster.internal/ubuntu noble-proposed/main s390x systemd-dev all 255-1ubuntu1 [98.5 kB] Get:58 http://ftpmaster.internal/ubuntu noble-proposed/main s390x systemd s390x 255-1ubuntu1 [3581 kB] Get:59 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsystemd-shared s390x 255-1ubuntu1 [2129 kB] Get:60 http://ftpmaster.internal/ubuntu noble/main s390x libargon2-1 s390x 0~20190702+dfsg-4 [53.1 kB] Get:61 http://ftpmaster.internal/ubuntu noble/main s390x libuuid1 s390x 2.39.2-6ubuntu1 [34.4 kB] Get:62 http://ftpmaster.internal/ubuntu noble/main s390x libcryptsetup12 s390x 2:2.6.1-5ubuntu1 [239 kB] Get:63 http://ftpmaster.internal/ubuntu noble/main s390x libfdisk1 s390x 2.39.2-6ubuntu1 [149 kB] Get:64 http://ftpmaster.internal/ubuntu noble/main s390x mount s390x 2.39.2-6ubuntu1 [118 kB] Get:65 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsystemd0 s390x 255-1ubuntu1 [440 kB] Get:66 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libudev1 s390x 255-1ubuntu1 [174 kB] Get:67 http://ftpmaster.internal/ubuntu noble/main s390x libxxhash0 s390x 0.8.2-2 [23.6 kB] Get:68 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libapt-pkg6.0 s390x 2.7.7 [962 kB] Get:69 http://ftpmaster.internal/ubuntu noble/main s390x tar s390x 1.34+dfsg-1.2ubuntu2 [315 kB] Get:70 http://ftpmaster.internal/ubuntu noble/main s390x dpkg s390x 1.22.1ubuntu5 [1391 kB] Get:71 http://ftpmaster.internal/ubuntu noble/main s390x grep s390x 3.11-3 [172 kB] Get:72 http://ftpmaster.internal/ubuntu noble/main s390x login s390x 1:4.13+dfsg1-3ubuntu1 [202 kB] Get:73 http://ftpmaster.internal/ubuntu noble/main s390x ncurses-bin s390x 6.4+20231209-1 [196 kB] Get:74 http://ftpmaster.internal/ubuntu noble/main s390x libperl5.36 s390x 5.36.0-10ubuntu1 [4899 kB] Get:75 http://ftpmaster.internal/ubuntu noble/main s390x perl s390x 5.36.0-10ubuntu1 [235 kB] Get:76 http://ftpmaster.internal/ubuntu noble/main s390x perl-base s390x 5.36.0-10ubuntu1 [1881 kB] Get:77 http://ftpmaster.internal/ubuntu noble/main s390x perl-modules-5.36 all 5.36.0-10ubuntu1 [2984 kB] Get:78 http://ftpmaster.internal/ubuntu noble/main s390x libdb5.3 s390x 5.3.28+dfsg2-4 [752 kB] Get:79 http://ftpmaster.internal/ubuntu noble/main s390x libgdbm6 s390x 1.23-5 [35.5 kB] Get:80 http://ftpmaster.internal/ubuntu noble/main s390x libgdbm-compat4 s390x 1.23-5 [6538 B] Get:81 http://ftpmaster.internal/ubuntu noble/main s390x util-linux s390x 2.39.2-6ubuntu1 [1137 kB] Get:82 http://ftpmaster.internal/ubuntu noble/main s390x libdebconfclient0 s390x 0.271ubuntu1 [11.3 kB] Get:83 http://ftpmaster.internal/ubuntu noble/main s390x base-passwd s390x 3.6.3 [51.1 kB] Get:84 http://ftpmaster.internal/ubuntu noble-proposed/main s390x init-system-helpers all 1.66ubuntu1 [39.4 kB] Get:85 http://ftpmaster.internal/ubuntu noble/main s390x libc-bin s390x 2.38-3ubuntu1 [659 kB] Get:86 http://ftpmaster.internal/ubuntu noble/main s390x ncurses-base all 6.4+20231209-1 [25.2 kB] Get:87 http://ftpmaster.internal/ubuntu noble/main s390x sysvinit-utils s390x 3.08-3ubuntu1 [34.3 kB] Get:88 http://ftpmaster.internal/ubuntu noble-proposed/main s390x apt s390x 2.7.7 [1377 kB] Get:89 http://ftpmaster.internal/ubuntu noble-proposed/main s390x apt-utils s390x 2.7.7 [213 kB] Get:90 http://ftpmaster.internal/ubuntu noble/main s390x ubuntu-keyring all 2023.11.28.1 [11.1 kB] Get:91 http://ftpmaster.internal/ubuntu noble/main s390x libunistring5 s390x 1.1-2 [544 kB] Get:92 http://ftpmaster.internal/ubuntu noble/main s390x libidn2-0 s390x 2.3.4-1build1 [65.1 kB] Get:93 http://ftpmaster.internal/ubuntu noble/main s390x libffi8 s390x 3.4.4-2 [22.6 kB] Get:94 http://ftpmaster.internal/ubuntu noble/main s390x libp11-kit0 s390x 0.25.3-2ubuntu2 [313 kB] Get:95 http://ftpmaster.internal/ubuntu noble/main s390x libgnutls30 s390x 3.8.1-4ubuntu6 [937 kB] Get:96 http://ftpmaster.internal/ubuntu noble/main s390x libpam-modules-bin s390x 1.5.2-9.1ubuntu1 [51.9 kB] Get:97 http://ftpmaster.internal/ubuntu noble/main s390x libpam-modules s390x 1.5.2-9.1ubuntu1 [291 kB] Get:98 http://ftpmaster.internal/ubuntu noble-proposed/main s390x init s390x 1.66ubuntu1 [6188 B] Get:99 http://ftpmaster.internal/ubuntu noble/main s390x libsmartcols1 s390x 2.39.2-6ubuntu1 [66.3 kB] Get:100 http://ftpmaster.internal/ubuntu noble/main s390x uuid-runtime s390x 2.39.2-6ubuntu1 [33.2 kB] Get:101 http://ftpmaster.internal/ubuntu noble/main s390x libgpg-error-l10n all 1.47-3build1 [8024 B] Get:102 http://ftpmaster.internal/ubuntu noble/main s390x libgpg-error0 s390x 1.47-3build1 [75.6 kB] Get:103 http://ftpmaster.internal/ubuntu noble/main s390x libpam-runtime all 1.5.2-9.1ubuntu1 [41.5 kB] Get:104 http://ftpmaster.internal/ubuntu noble/main s390x libsemanage-common all 3.5-1build1 [9982 B] Get:105 http://ftpmaster.internal/ubuntu noble/main s390x libsepol2 s390x 3.5-2 [308 kB] Get:106 http://ftpmaster.internal/ubuntu noble/main s390x libsemanage2 s390x 3.5-1build1 [95.1 kB] Get:107 http://ftpmaster.internal/ubuntu noble/main s390x libncursesw6 s390x 6.4+20231209-1 [158 kB] Get:108 http://ftpmaster.internal/ubuntu noble/main s390x libtinfo6 s390x 6.4+20231209-1 [115 kB] Get:109 http://ftpmaster.internal/ubuntu noble/main s390x passwd s390x 1:4.13+dfsg1-3ubuntu1 [855 kB] Get:110 http://ftpmaster.internal/ubuntu noble/main s390x libproc2-0 s390x 2:4.0.4-2ubuntu1 [58.6 kB] Get:111 http://ftpmaster.internal/ubuntu noble/main s390x mawk s390x 1.3.4.20231126-1 [132 kB] Get:112 http://ftpmaster.internal/ubuntu noble/main s390x procps s390x 2:4.0.4-2ubuntu1 [722 kB] Get:113 http://ftpmaster.internal/ubuntu noble/main s390x krb5-locales all 1.20.1-5build1 [13.7 kB] Get:114 http://ftpmaster.internal/ubuntu noble/main s390x readline-common all 8.2-3 [56.2 kB] Get:115 http://ftpmaster.internal/ubuntu noble/main s390x libreadline8 s390x 8.2-3 [167 kB] Get:116 http://ftpmaster.internal/ubuntu noble/main s390x libsqlite3-0 s390x 3.44.2-1 [727 kB] Get:117 http://ftpmaster.internal/ubuntu noble/main s390x openssl s390x 3.0.10-1ubuntu3 [1189 kB] Get:118 http://ftpmaster.internal/ubuntu noble/main s390x bash-completion all 1:2.11-8 [180 kB] Get:119 http://ftpmaster.internal/ubuntu noble/main s390x bsdextrautils s390x 2.39.2-6ubuntu1 [75.7 kB] Get:120 http://ftpmaster.internal/ubuntu noble/main s390x libpng16-16 s390x 1.6.40-2 [197 kB] Get:121 http://ftpmaster.internal/ubuntu noble/main s390x xz-utils s390x 5.4.5-0.1 [269 kB] Get:122 http://ftpmaster.internal/ubuntu noble/main s390x g++ s390x 4:13.2.0-2ubuntu1 [1118 B] Get:123 http://ftpmaster.internal/ubuntu noble/main s390x gcc s390x 4:13.2.0-2ubuntu1 [5172 B] Get:124 http://ftpmaster.internal/ubuntu noble/main s390x cpp s390x 4:13.2.0-2ubuntu1 [29.0 kB] Get:125 http://ftpmaster.internal/ubuntu noble/main s390x dpkg-dev all 1.22.1ubuntu5 [1147 kB] Get:126 http://ftpmaster.internal/ubuntu noble/main s390x libdpkg-perl all 1.22.1ubuntu5 [286 kB] Get:127 http://ftpmaster.internal/ubuntu noble/main s390x lto-disabled-list all 44 [12.4 kB] Get:128 http://ftpmaster.internal/ubuntu noble/main s390x libfakeroot s390x 1.32.2-1 [31.5 kB] Get:129 http://ftpmaster.internal/ubuntu noble/main s390x fakeroot s390x 1.32.2-1 [67.3 kB] Get:130 http://ftpmaster.internal/ubuntu noble/main s390x optipng s390x 0.7.7-3 [87.0 kB] Get:131 http://ftpmaster.internal/ubuntu noble/main s390x pinentry-curses s390x 1.2.1-3ubuntu1 [37.1 kB] Preconfiguring packages ... Fetched 95.5 MB in 7s (12.9 MB/s) (Reading database ... 13395 files and directories currently installed.) Preparing to unpack .../00-libnsl-dev_1.3.0-3_s390x.deb ... Unpacking libnsl-dev:s390x (1.3.0-3) over (1.3.0-2build2) ... Preparing to unpack .../01-libc6-dev_2.38-3ubuntu1_s390x.deb ... Unpacking libc6-dev:s390x (2.38-3ubuntu1) over (2.38-1ubuntu6) ... Preparing to unpack .../02-libc-dev-bin_2.38-3ubuntu1_s390x.deb ... Unpacking libc-dev-bin (2.38-3ubuntu1) over (2.38-1ubuntu6) ... Preparing to unpack .../03-libtirpc-common_1.3.4+ds-1_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1) over (1.3.3+ds-1) ... Preparing to unpack .../04-libtirpc-dev_1.3.4+ds-1_s390x.deb ... Unpacking libtirpc-dev:s390x (1.3.4+ds-1) over (1.3.3+ds-1) ... Preparing to unpack .../05-libgssapi-krb5-2_1.20.1-5build1_s390x.deb ... Unpacking libgssapi-krb5-2:s390x (1.20.1-5build1) over (1.20.1-3ubuntu1) ... Preparing to unpack .../06-libkrb5-3_1.20.1-5build1_s390x.deb ... 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Setting up libgdbm6:s390x (1.23-5) ... Setting up libctf0:s390x (2.41.50.20231214-1ubuntu1) ... Setting up pinentry-curses (1.2.1-3ubuntu1) ... Setting up binutils-s390x-linux-gnu (2.41.50.20231214-1ubuntu1) ... Setting up libreadline8:s390x (8.2-3) ... Setting up binutils (2.41.50.20231214-1ubuntu1) ... Setting up optipng (0.7.7-3) ... Setting up libgssapi-krb5-2:s390x (1.20.1-5build1) ... Setting up libgdbm-compat4:s390x (1.23-5) ... Setting up libgcc-13-dev:s390x (13.2.0-9ubuntu1) ... Setting up libperl5.36:s390x (5.36.0-10ubuntu1) ... Setting up libtirpc3:s390x (1.3.4+ds-1) ... Setting up perl (5.36.0-10ubuntu1) ... Setting up libtirpc-dev:s390x (1.3.4+ds-1) ... Setting up gcc-13 (13.2.0-9ubuntu1) ... Setting up libdpkg-perl (1.22.1ubuntu5) ... Setting up libnsl2:s390x (1.3.0-3) ... Setting up gcc (4:13.2.0-2ubuntu1) ... Setting up dpkg-dev (1.22.1ubuntu5) ... Setting up libnsl-dev:s390x (1.3.0-3) ... Setting up libc6-dev:s390x (2.38-3ubuntu1) ... Setting up libstdc++-13-dev:s390x (13.2.0-9ubuntu1) ... Setting up g++-13 (13.2.0-9ubuntu1) ... Setting up g++ (4:13.2.0-2ubuntu1) ... Processing triggers for libc-bin (2.38-3ubuntu1) ... Processing triggers for debianutils (5.14) ... RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-27576347 s390x noble-proposed -c chroot:build-PACKAGEBUILD-27576347 --arch=s390x --dist=noble-proposed --nolog delly_1.1.8-1build1.dsc Initiating build PACKAGEBUILD-27576347 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 5.4.0-169-generic #187-Ubuntu SMP Thu Nov 23 14:52:16 UTC 2023 s390x sbuild (Debian sbuild) 0.79.0 (05 February 2020) on bos02-s390x-014.buildd +==============================================================================+ | delly 1.1.8-1build1 (s390x) Tue, 19 Dec 2023 19:36:04 +0000 | +==============================================================================+ Package: delly Version: 1.1.8-1build1 Source Version: 1.1.8-1build1 Distribution: noble-proposed Machine Architecture: s390x Host Architecture: s390x Build Architecture: s390x Build Type: any I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-27576347/chroot-autobuild' with '<>' I: NOTICE: Log filtering will replace 'build/delly-V10kpe/resolver-Uw3w8X' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- delly_1.1.8-1build1.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/delly-V10kpe/delly-1.1.8' with '<>' I: NOTICE: Log filtering will replace 'build/delly-V10kpe' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), libboost-date-time-dev, libboost-program-options-dev, libboost-system-dev, libboost-filesystem-dev, libboost-iostreams-dev, libhts-dev, libbz2-dev, zlib1g-dev, chrpath, debhelper, build-essential, fakeroot Filtered Build-Depends: debhelper-compat (= 13), libboost-date-time-dev, libboost-program-options-dev, libboost-system-dev, libboost-filesystem-dev, libboost-iostreams-dev, libhts-dev, libbz2-dev, zlib1g-dev, chrpath, debhelper, build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [438 B] Get:5 copy:/<>/apt_archive ./ Packages [519 B] Fetched 1914 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: apt-utils bash-completion ca-certificates debconf-i18n krb5-locales libgpg-error-l10n libgpm2 libip4tc2 liblocale-gettext-perl libnss-nis libnss-nisplus libtext-charwidth-perl libtext-iconv-perl libtext-wrapi18n-perl libunistring2 openssl psmisc uuid-runtime Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev chrpath debhelper debugedit dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl libboost-atomic1.83-dev libboost-atomic1.83.0 libboost-date-time-dev libboost-date-time1.83-dev libboost-date-time1.83.0 libboost-filesystem-dev libboost-filesystem1.83-dev libboost-filesystem1.83.0 libboost-iostreams-dev libboost-iostreams1.83-dev libboost-iostreams1.83.0 libboost-program-options-dev libboost-program-options1.83-dev libboost-program-options1.83.0 libboost-regex1.83-dev libboost-regex1.83.0 libboost-serialization1.83-dev libboost-serialization1.83.0 libboost-system-dev libboost-system1.83-dev libboost-system1.83.0 libboost1.83-dev libbrotli1 libbz2-dev libcurl3-gnutls libcurl4-gnutls-dev libdebhelper-perl libdeflate-dev libdeflate0 libdw1 libelf1 libfile-stripnondeterminism-perl libhts-dev libhts3 libhtscodecs2 libicu-dev libicu74 libldap2 liblzma-dev libmagic-mgc libmagic1 libnghttp2-14 libpipeline1 libpsl5 librtmp1 libsasl2-2 libsasl2-modules-db libssh-4 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db po-debconf zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc libasprintf-dev libgettextpo-dev groff libboost1.83-doc libboost-chrono1.83-dev libboost-container1.83-dev libboost-context1.83-dev libboost-contract1.83-dev libboost-coroutine1.83-dev libboost-exception1.83-dev libboost-fiber1.83-dev libboost-graph1.83-dev libboost-graph-parallel1.83-dev libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev libboost-mpi1.83-dev libboost-mpi-python1.83-dev libboost-numpy1.83-dev libboost-python1.83-dev libboost-random1.83-dev libboost-stacktrace1.83-dev libboost-test1.83-dev libboost-thread1.83-dev libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev libboost-nowide1.83-dev libcurl4-doc libgnutls28-dev libidn-dev libkrb5-dev libldap2-dev librtmp-dev libssh2-1-dev pkg-config icu-doc liblzma-doc libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx bzip2-doc libarchive-cpio-perl libldap-common publicsuffix libsasl2-modules libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev chrpath debhelper debugedit dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl libboost-atomic1.83-dev libboost-atomic1.83.0 libboost-date-time-dev libboost-date-time1.83-dev libboost-date-time1.83.0 libboost-filesystem-dev libboost-filesystem1.83-dev libboost-filesystem1.83.0 libboost-iostreams-dev libboost-iostreams1.83-dev libboost-iostreams1.83.0 libboost-program-options-dev libboost-program-options1.83-dev libboost-program-options1.83.0 libboost-regex1.83-dev libboost-regex1.83.0 libboost-serialization1.83-dev libboost-serialization1.83.0 libboost-system-dev libboost-system1.83-dev libboost-system1.83.0 libboost1.83-dev libbrotli1 libbz2-dev libcurl3-gnutls libcurl4-gnutls-dev libdebhelper-perl libdeflate-dev libdeflate0 libdw1 libelf1 libfile-stripnondeterminism-perl libhts-dev libhts3 libhtscodecs2 libicu-dev libicu74 libldap2 liblzma-dev libmagic-mgc libmagic1 libnghttp2-14 libpipeline1 libpsl5 librtmp1 libsasl2-2 libsasl2-modules-db libssh-4 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db po-debconf sbuild-build-depends-main-dummy zlib1g-dev 0 upgraded, 74 newly installed, 0 to remove and 0 not upgraded. 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libnghttp2-14 s390x 1.58.0-1 [76.2 kB] Get:12 http://ftpmaster.internal/ubuntu noble/main s390x libpipeline1 s390x 1.5.7-1 [23.4 kB] Get:13 http://ftpmaster.internal/ubuntu noble/main s390x libpsl5 s390x 0.21.2-1build1 [57.4 kB] Get:14 http://ftpmaster.internal/ubuntu noble/main s390x man-db s390x 2.12.0-1 [1242 kB] Get:15 http://ftpmaster.internal/ubuntu noble/main s390x m4 s390x 1.4.19-4 [255 kB] Get:16 http://ftpmaster.internal/ubuntu noble/main s390x autoconf all 2.71-3 [339 kB] Get:17 http://ftpmaster.internal/ubuntu noble/main s390x autotools-dev all 20220109.1 [44.9 kB] Get:18 http://ftpmaster.internal/ubuntu noble/main s390x automake all 1:1.16.5-1.3 [558 kB] Get:19 http://ftpmaster.internal/ubuntu noble/main s390x autopoint all 0.21-14 [422 kB] Get:20 http://ftpmaster.internal/ubuntu noble/universe s390x chrpath s390x 0.16-2 [13.2 kB] Get:21 http://ftpmaster.internal/ubuntu noble/main s390x libdebhelper-perl all 13.11.8ubuntu1 [85.9 kB] Get:22 http://ftpmaster.internal/ubuntu 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s390x 1.83.0-1ubuntu3 [408 kB] Get:42 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libboost-date-time1.83-dev s390x 1.83.0-1ubuntu3 [239 kB] Get:43 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libboost-date-time-dev s390x 1.83.0.1ubuntu2 [4062 B] Get:44 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libboost-filesystem1.83.0 s390x 1.83.0-1ubuntu3 [286 kB] Get:45 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libboost-system1.83.0 s390x 1.83.0-1ubuntu3 [236 kB] Get:46 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libboost-system1.83-dev s390x 1.83.0-1ubuntu3 [231 kB] Get:47 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libboost-filesystem1.83-dev s390x 1.83.0-1ubuntu3 [305 kB] Get:48 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libboost-filesystem-dev s390x 1.83.0.1ubuntu2 [4096 B] Get:49 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libboost-regex1.83.0 s390x 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1.83.0.1ubuntu2 [4088 B] Get:58 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libboost-system-dev s390x 1.83.0.1ubuntu2 [4206 B] Get:59 http://ftpmaster.internal/ubuntu noble/main s390x libbrotli1 s390x 1.1.0-2 [374 kB] Get:60 http://ftpmaster.internal/ubuntu noble/main s390x libbz2-dev s390x 1.0.8-5build1 [33.8 kB] Get:61 http://ftpmaster.internal/ubuntu noble/main s390x libsasl2-modules-db s390x 2.1.28+dfsg1-4 [20.8 kB] Get:62 http://ftpmaster.internal/ubuntu noble/main s390x libsasl2-2 s390x 2.1.28+dfsg1-4 [58.7 kB] Get:63 http://ftpmaster.internal/ubuntu noble/main s390x libldap2 s390x 2.6.6+dfsg-1~exp1ubuntu1 [199 kB] Get:64 http://ftpmaster.internal/ubuntu noble/main s390x librtmp1 s390x 2.4+20151223.gitfa8646d.1-2build4 [56.4 kB] Get:65 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libssh-4 s390x 0.10.5-3ubuntu2 [187 kB] Get:66 http://ftpmaster.internal/ubuntu noble/main s390x libcurl3-gnutls s390x 8.4.0-2ubuntu1 [348 kB] Get:67 http://ftpmaster.internal/ubuntu noble/main s390x libcurl4-gnutls-dev s390x 8.4.0-2ubuntu1 [457 kB] Get:68 http://ftpmaster.internal/ubuntu noble/main s390x libdeflate0 s390x 1.18-1 [44.9 kB] Get:69 http://ftpmaster.internal/ubuntu noble/main s390x libdeflate-dev s390x 1.18-1 [51.1 kB] Get:70 http://ftpmaster.internal/ubuntu noble/universe s390x libhtscodecs2 s390x 1.6.0-1 [87.2 kB] Get:71 http://ftpmaster.internal/ubuntu noble/universe s390x libhts3 s390x 1.18+ds-1 [463 kB] Get:72 http://ftpmaster.internal/ubuntu noble/main s390x liblzma-dev s390x 5.4.5-0.1 [183 kB] Get:73 http://ftpmaster.internal/ubuntu noble-proposed/main s390x zlib1g-dev s390x 1:1.3.dfsg-3ubuntu1 [905 kB] Get:74 http://ftpmaster.internal/ubuntu noble/universe s390x libhts-dev s390x 1.18+ds-1 [5867 kB] Preconfiguring packages ... 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Setting up libboost-program-options1.83.0:s390x (1.83.0-1ubuntu3) ... Setting up libboost1.83-dev:s390x (1.83.0-1ubuntu3) ... Setting up libpsl5:s390x (0.21.2-1build1) ... Setting up libboost-date-time1.83.0:s390x (1.83.0-1ubuntu3) ... Setting up libmagic-mgc (1:5.45-2) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libboost-regex1.83.0:s390x (1.83.0-1ubuntu3) ... Setting up libdebhelper-perl (13.11.8ubuntu1) ... Setting up libbrotli1:s390x (1.1.0-2) ... Setting up libboost-system1.83.0:s390x (1.83.0-1ubuntu3) ... Setting up libboost-program-options1.83-dev:s390x (1.83.0-1ubuntu3) ... Setting up libnghttp2-14:s390x (1.58.0-1) ... Setting up libmagic1:s390x (1:5.45-2) ... Setting up libdeflate0:s390x (1.18-1) ... Setting up gettext-base (0.21-14) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-2) ... Setting up libboost-filesystem1.83.0:s390x (1.83.0-1ubuntu3) ... Setting up libsasl2-modules-db:s390x (2.1.28+dfsg1-4) ... Setting up libboost-atomic1.83.0:s390x (1.83.0-1ubuntu3) ... Setting up libboost-serialization1.83.0:s390x (1.83.0-1ubuntu3) ... Setting up autotools-dev (20220109.1) ... Setting up libboost-program-options-dev:s390x (1.83.0.1ubuntu2) ... Setting up librtmp1:s390x (2.4+20151223.gitfa8646d.1-2build4) ... Setting up libboost-iostreams1.83.0:s390x (1.83.0-1ubuntu3) ... Setting up autopoint (0.21-14) ... Setting up libsasl2-2:s390x (2.1.28+dfsg1-4) ... Setting up libssh-4:s390x (0.10.5-3ubuntu2) ... Setting up libboost-atomic1.83-dev:s390x (1.83.0-1ubuntu3) ... Setting up autoconf (2.71-3) ... Setting up liblzma-dev:s390x (5.4.5-0.1) ... Setting up libicu74:s390x (74.2-1ubuntu1) ... Setting up zlib1g-dev:s390x (1:1.3.dfsg-3ubuntu1) ... Setting up libuchardet0:s390x (0.0.8-1) ... Setting up libsub-override-perl (0.10-1) ... Setting up libboost-system1.83-dev:s390x (1.83.0-1ubuntu3) ... Setting up libdeflate-dev:s390x (1.18-1) ... Setting up libelf1:s390x (0.190-1) ... Setting up libxml2:s390x (2.9.14+dfsg-1.3build3) ... Setting up libldap2:s390x (2.6.6+dfsg-1~exp1ubuntu1) ... Setting up chrpath (0.16-2) ... Setting up libbz2-dev:s390x (1.0.8-5build1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up libdw1:s390x (0.190-1) ... Setting up gettext (0.21-14) ... Setting up libtool (2.4.7-7) ... Setting up libboost-system-dev:s390x (1.83.0.1ubuntu2) ... Setting up libboost-serialization1.83-dev:s390x (1.83.0-1ubuntu3) ... Setting up libcurl3-gnutls:s390x (8.4.0-2ubuntu1) ... Setting up libboost-filesystem1.83-dev:s390x (1.83.0-1ubuntu3) ... Setting up libcurl4-gnutls-dev:s390x (8.4.0-2ubuntu1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libboost-date-time1.83-dev:s390x (1.83.0-1ubuntu3) ... Setting up icu-devtools (74.2-1ubuntu1) ... Setting up libboost-date-time-dev:s390x (1.83.0.1ubuntu2) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.23.0-3) ... Setting up debugedit (1:5.0-5) ... Setting up libicu-dev:s390x (74.2-1ubuntu1) ... Setting up libboost-filesystem-dev:s390x (1.83.0.1ubuntu2) ... Setting up libhts3:s390x (1.18+ds-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libhts-dev:s390x (1.18+ds-1) ... Setting up man-db (2.12.0-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /usr/lib/systemd/system/man-db.timer. Setting up libboost-regex1.83-dev:s390x (1.83.0-1ubuntu3) ... Setting up libboost-iostreams1.83-dev:s390x (1.83.0-1ubuntu3) ... Setting up debhelper (13.11.8ubuntu1) ... Setting up libboost-iostreams-dev:s390x (1.83.0.1ubuntu2) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.38-3ubuntu1) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (s390x included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.4.0-169-generic #187-Ubuntu SMP Thu Nov 23 14:52:16 UTC 2023 s390x (s390x) Toolchain package versions: binutils_2.41.50.20231214-1ubuntu1 dpkg-dev_1.22.1ubuntu5 g++-13_13.2.0-9ubuntu1 gcc-13_13.2.0-9ubuntu1 libc6-dev_2.38-3ubuntu1 libstdc++-13-dev_13.2.0-9ubuntu1 libstdc++6_13.2.0-9ubuntu1 linux-libc-dev_6.6.0-14.14 Package versions: adduser_3.137ubuntu1 advancecomp_2.5-1 apt_2.7.7 apt-utils_2.7.7 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-14 autotools-dev_20220109.1 base-files_13ubuntu5 base-passwd_3.6.3 bash_5.2.21-2ubuntu1 bash-completion_1:2.11-8 binutils_2.41.50.20231214-1ubuntu1 binutils-common_2.41.50.20231214-1ubuntu1 binutils-s390x-linux-gnu_2.41.50.20231214-1ubuntu1 bsdextrautils_2.39.2-6ubuntu1 bsdutils_1:2.39.2-6ubuntu1 build-essential_12.10ubuntu1 bzip2_1.0.8-5build1 ca-certificates_20230311ubuntu1 chrpath_0.16-2 coreutils_9.4-2ubuntu1 cpp_4:13.2.0-2ubuntu1 cpp-13_13.2.0-9ubuntu1 dash_0.5.12-6ubuntu1 debconf_1.5.82 debconf-i18n_1.5.82 debhelper_13.11.8ubuntu1 debianutils_5.14 debugedit_1:5.0-5 dh-autoreconf_20 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.10-1 dpkg_1.22.1ubuntu5 dpkg-dev_1.22.1ubuntu5 dwz_0.15-1 e2fsprogs_1.47.0-2ubuntu1 fakeroot_1.32.2-1 file_1:5.45-2 findutils_4.9.0-5 g++_4:13.2.0-2ubuntu1 g++-13_13.2.0-9ubuntu1 gcc_4:13.2.0-2ubuntu1 gcc-13_13.2.0-9ubuntu1 gcc-13-base_13.2.0-9ubuntu1 gettext_0.21-14 gettext-base_0.21-14 gpg_2.2.40-1.1ubuntu1 gpg-agent_2.2.40-1.1ubuntu1 gpgconf_2.2.40-1.1ubuntu1 gpgv_2.2.40-1.1ubuntu1 grep_3.11-3 groff-base_1.23.0-3 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libboost-program-options-dev_1.83.0.1ubuntu2 libboost-program-options1.83-dev_1.83.0-1ubuntu3 libboost-program-options1.83.0_1.83.0-1ubuntu3 libboost-regex1.83-dev_1.83.0-1ubuntu3 libboost-regex1.83.0_1.83.0-1ubuntu3 libboost-serialization1.83-dev_1.83.0-1ubuntu3 libboost-serialization1.83.0_1.83.0-1ubuntu3 libboost-system-dev_1.83.0.1ubuntu2 libboost-system1.83-dev_1.83.0-1ubuntu3 libboost-system1.83.0_1.83.0-1ubuntu3 libboost1.83-dev_1.83.0-1ubuntu3 libbrotli1_1.1.0-2 libbz2-1.0_1.0.8-5build1 libbz2-dev_1.0.8-5build1 libc-bin_2.38-3ubuntu1 libc-dev-bin_2.38-3ubuntu1 libc6_2.38-3ubuntu1 libc6-dev_2.38-3ubuntu1 libcap-ng0_0.8.3-3 libcap2_1:2.66-4ubuntu1 libcc1-0_13.2.0-9ubuntu1 libcom-err2_1.47.0-2ubuntu1 libcrypt-dev_1:4.4.36-2 libcrypt1_1:4.4.36-2 libcryptsetup12_2:2.6.1-5ubuntu1 libctf-nobfd0_2.41.50.20231214-1ubuntu1 libctf0_2.41.50.20231214-1ubuntu1 libcurl3-gnutls_8.4.0-2ubuntu1 libcurl4-gnutls-dev_8.4.0-2ubuntu1 libdb5.3_5.3.28+dfsg2-4 libdebconfclient0_0.271ubuntu1 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+------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: delly Binary: delly Architecture: any Version: 1.1.8-1build1 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller Homepage: https://github.com/dellytools/delly Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/delly Vcs-Git: https://salsa.debian.org/med-team/delly.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), libboost-date-time-dev, libboost-program-options-dev, libboost-system-dev, libboost-filesystem-dev, libboost-iostreams-dev, libhts-dev, libbz2-dev, zlib1g-dev, chrpath, debhelper Package-List: delly deb science optional arch=any Checksums-Sha1: cf08c2c461916e0c2ed3e0e156a133ed141ac4db 3743720 delly_1.1.8.orig.tar.xz 5e4b3c274c95802f0c00ab8422ac81910ba0ae35 5312 delly_1.1.8-1build1.debian.tar.xz Checksums-Sha256: 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8Edw8lr/SJpDPXGZVp7ECUjiF+JKdliIhh14ic3bCQar9mSpokBqmzTWId8wAuuZ sER69VLDII9DhaV51SlH3h+SUjhBD6bSi1RRpeW5qS/geknOzILcaSGi7bKrhTWW ACFbLyu6uRlz3iBekjbMCCAWBCTnw0GaSRl2yYkTTmrx/DdnflU= =iSAT -----END PGP SIGNATURE----- gpgv: Signature made Tue Dec 19 15:01:08 2023 UTC gpgv: using RSA key 568BF22A66337CBFC9A6B9B72C83DBC8E9BD0E37 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./delly_1.1.8-1build1.dsc: no acceptable signature found dpkg-source: info: extracting delly in /<> dpkg-source: info: unpacking delly_1.1.8.orig.tar.xz dpkg-source: info: unpacking delly_1.1.8-1build1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying reproducible.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-27576347 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-27576347 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-27576347 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- Command: dpkg-buildpackage -us -uc -mLaunchpad Build Daemon -B -rfakeroot dpkg-buildpackage: info: source package delly dpkg-buildpackage: info: source version 1.1.8-1build1 dpkg-buildpackage: info: source distribution noble dpkg-source --before-build . dpkg-buildpackage: info: host architecture s390x debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean make -j4 distclean make[2]: Entering directory '/<>' if [ -r src/htslib/Makefile ]; then cd src/htslib && make clean; fi rm -f src/delly src/delly.o rm -f src/delly make[2]: Leaving directory '/<>' rm -rf src/dpe src/delly bin/delly make[1]: Leaving directory '/<>' dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build -- BUILT_PROGRAMS="src/delly" PARALLEL=1 make -j4 "INSTALL=install --strip-program=true" BUILT_PROGRAMS=src/delly PARALLEL=1 make[2]: Entering directory '/<>' g++ -g -O2 -fno-omit-frame-pointer -mbackchain -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/delly-1.1.8-1build1 -Wdate-time -D_FORTIFY_SOURCE=3 -std=c++11 -isystem /usr/include/htslib/ -pedantic -W -Wall -Wno-unknown-pragmas -D__STDC_LIMIT_MACROS -fno-strict-aliasing -fpermissive -fopenmp -DOPENMP -O3 -fno-tree-vectorize -DNDEBUG src/delly.cpp src/edlib.cpp -o src/delly -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -L/usr/include/htslib/ -lboost_iostreams -lboost_filesystem -lboost_system -lboost_program_options -lboost_date_time -lhts -lz -llzma -lbz2 -Wl,-rpath,/usr/include/htslib/ In file included from /usr/include/boost/math/special_functions/detail/round_fwd.hpp:11, from /usr/include/boost/math/special_functions/math_fwd.hpp:29, from /usr/include/boost/math/special_functions/pow.hpp:16, from src/delly.h:19, from src/delly.cpp:18: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ In file included from src/util.h:15, from src/delly.h:32: src/tags.h:76:32: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 76 | struct SortSVs : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/ostream:40, from /usr/include/c++/13/iostream:41, from src/delly.cpp:3: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ src/util.h:61:33: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 61 | struct SortCNVs : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from src/delly.h:35: src/coverage.h:51:31: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 51 | struct SortBp : public std::binary_function { | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from src/shortpe.h:36, from src/delly.h:38: src/junction.h:37:40: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 37 | struct SortSRBamRecord : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ src/junction.h:80:37: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 80 | struct SortJunction : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from src/shortpe.h:37: src/cluster.h:42:39: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 42 | struct SortBamRecords : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ src/cluster.h:71:40: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 71 | struct SortEdgeRecords : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from src/delly.cpp:21: src/merge.h:68:34: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 68 | struct SortIScores : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from src/coral.h:17, from src/delly.cpp:23: src/scan.h:33:39: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 33 | struct SortScanWindow : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from src/coral.h:19: src/cnv.h:42:41: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 42 | struct SortSVBreakpoint : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from src/pangenome.h:33, from src/delly.cpp:26: src/gfa.h:43:34: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 43 | struct SortLinks : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from src/pangenome.h:34: src/gaf.h:41:40: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 41 | struct SortAlignRecord : public std::binary_function { | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from src/delly.cpp:27: src/markdup.h:62:37: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 62 | struct SortSVEvents : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from src/delly.cpp:28: src/compvcf.h:65:41: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 65 | struct SortCompSVRecord : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/s390x-linux-gnu/c++/13/bits/c++allocator.h:33, from /usr/include/c++/13/bits/allocator.h:46, from /usr/include/c++/13/string:43: In member function ‘std::__new_allocator::construct(char*)void’, inlined from ‘boost::allocator_construct, char>(std::allocator&, char*)std::enable_if, char>::value, void>::type’ at /usr/include/boost/core/allocator_access.hpp:521:16, inlined from ‘boost::allocator_construct_n, char>(std::allocator&, char*, unsigned long)void’ at /usr/include/boost/core/allocator_access.hpp:737:35, inlined from ‘boost::alloc_construct_n, char>(std::allocator&, char*, unsigned long)void’ at /usr/include/boost/core/alloc_construct.hpp:76:33, inlined from ‘boost::multi_array >::allocate_space()’ at /usr/include/boost/multi_array.hpp:548:29, inlined from ‘boost::multi_array >::multi_array(std::allocator const&) [clone .constprop.0]’ at /usr/include/boost/multi_array.hpp:156:19: /usr/include/c++/13/bits/new_allocator.h:191:11: warning: ‘memset’ offset 0 is out of the bounds [0, 0] [-Warray-bounds=] 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:66, from /usr/include/boost/graph/adjacency_list.hpp:16, from src/delly.h:8: In member function ‘std::vector >::resize(unsigned long, torali::ReadCount const&)’, inlined from ‘torali::runAsm(torali::AsmConfig&)int’ at src/asmode.h:399:26: /usr/include/c++/13/bits/stl_vector.h:1034:25: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 1034 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:72: /usr/include/c++/13/bits/vector.tcc: In function ‘torali::runAsm(torali::AsmConfig&)int’: /usr/include/c++/13/bits/vector.tcc:529:5: note: by argument 4 of type ‘const struct value_type &’ to ‘std::vector >::_M_fill_insert(__gnu_cxx::__normal_iterator > >, unsigned long, torali::ReadCount const&)’ declared here 529 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from src/delly.cpp:24: src/asmode.h:399:39: note: ‘’ declared here 399 | rcMap[file_c].resize(svs.size(), ReadCount()); | ^~~~~~~~~~~ In member function ‘std::vector >::resize(unsigned long, torali::ReadCount const&)’, inlined from ‘torali::annotateCoverage >, std::vector >, std::vector >, std::allocator > > >, std::vector >, std::allocator > > >, std::vector >, std::allocator > > > >(torali::Config&, std::vector >&, std::vector >&, std::vector >, std::allocator > > >&, std::vector >, std::allocator > > >&, std::vector >, std::allocator > > >&)void’ at src/coverage.h:265:30: /usr/include/c++/13/bits/stl_vector.h:1034:25: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 1034 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function ‘torali::annotateCoverage >, std::vector >, std::vector >, std::allocator > > >, std::vector >, std::allocator > > >, std::vector >, std::allocator > > > >(torali::Config&, std::vector >&, std::vector >&, std::vector >, std::allocator > > >&, std::vector >, std::allocator > > >&, std::vector >, std::allocator > > >&)void’: /usr/include/c++/13/bits/vector.tcc:529:5: note: by argument 4 of type ‘const struct value_type &’ to ‘std::vector >::_M_fill_insert(__gnu_cxx::__normal_iterator > >, unsigned long, torali::ReadCount const&)’ declared here 529 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ src/coverage.h:265:43: note: ‘’ declared here 265 | covCount[file_c].resize(svs.size(), TCovPair()); | ^~~~~~~~~~ In member function ‘std::vector >::resize(unsigned long, torali::ReadCount const&)’, inlined from ‘torali::runTegua(torali::TeguaConfig&)int’ at src/tegua.h:166:26: /usr/include/c++/13/bits/stl_vector.h:1034:25: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 1034 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function ‘torali::runTegua(torali::TeguaConfig&)int’: /usr/include/c++/13/bits/vector.tcc:529:5: note: by argument 4 of type ‘const struct value_type &’ to ‘std::vector >::_M_fill_insert(__gnu_cxx::__normal_iterator > >, unsigned long, torali::ReadCount const&)’ declared here 529 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from src/delly.cpp:22: src/tegua.h:166:39: note: ‘’ declared here 166 | rcMap[file_c].resize(svs.size(), ReadCount()); | ^~~~~~~~~~~ In member function ‘std::vector >::resize(unsigned long, torali::ReadCount const&)’, inlined from ‘torali::runGraph(torali::GraphConfig&)int’ at src/pangenome.h:772:26: /usr/include/c++/13/bits/stl_vector.h:1034:25: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 1034 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function ‘torali::runGraph(torali::GraphConfig&)int’: /usr/include/c++/13/bits/vector.tcc:529:5: note: by argument 4 of type ‘const struct value_type &’ to ‘std::vector >::_M_fill_insert(__gnu_cxx::__normal_iterator > >, unsigned long, torali::ReadCount const&)’ declared here 529 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ src/pangenome.h:772:39: note: ‘’ declared here 772 | rcMap[file_c].resize(svs.size(), ReadCount()); | ^~~~~~~~~~~ In member function ‘construct’, inlined from ‘allocator_construct’ at /usr/include/boost/core/allocator_access.hpp:521:16, inlined from ‘allocator_construct_n’ at /usr/include/boost/core/allocator_access.hpp:737:35, inlined from ‘alloc_construct_n’ at /usr/include/boost/core/alloc_construct.hpp:76:33, inlined from ‘allocate_space’ at /usr/include/boost/multi_array.hpp:548:29, inlined from ‘__ct_base .isra’ at /usr/include/boost/multi_array.hpp:156:19: /usr/include/c++/13/bits/new_allocator.h:191:11: warning: ‘__builtin_memset’ writing 1 or more bytes into a region of size 0 overflows the destination [-Wstringop-overflow=] 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^ In member function ‘allocate’, inlined from ‘allocate_space’ at /usr/include/boost/multi_array.hpp:545:33, inlined from ‘__ct_base .isra’ at /usr/include/boost/multi_array.hpp:156:19: /usr/include/c++/13/bits/new_allocator.h:151:55: note: destination object of size 0 allocated by ‘operator new’ 151 | return static_cast<_Tp*>(_GLIBCXX_OPERATOR_NEW(__n * sizeof(_Tp))); | ^ make[2]: Leaving directory '/<>' chrpath -d src/delly make[1]: Leaving directory '/<>' dh_auto_test -a create-stamp debian/debhelper-build-stamp dh_prep -a debian/rules override_dh_auto_install make[1]: Entering directory '/<>' # avoiding redundant compile of delly make[1]: Leaving directory '/<>' dh_install -a dh_installdocs -a dh_installchangelogs -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a 5687c6389372629afbfe33ab2e86df85b48e8821 dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a INFO: pkgstriptranslations version 154 INFO: pkgstriptranslations version 154 pkgstriptranslations: processing delly (in debian/delly); do_strip: , oemstrip: pkgstriptranslations: processing delly-dbgsym (in debian/.debhelper/delly/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/delly/DEBIAN/control, package delly, directory debian/delly pkgstripfiles: Running PNG optimization (using 4 cpus) for package delly ... pkgstripfiles: No PNG files. dpkg-deb: building package 'delly' in '../delly_1.1.8-1build1_s390x.deb'. pkgstripfiles: processing control file: debian/.debhelper/delly/dbgsym-root/DEBIAN/control, package delly-dbgsym, directory debian/.debhelper/delly/dbgsym-root dpkg-deb: building package 'delly-dbgsym' in 'debian/.debhelper/scratch-space/build-delly/delly-dbgsym_1.1.8-1build1_s390x.deb'. Renaming delly-dbgsym_1.1.8-1build1_s390x.deb to delly-dbgsym_1.1.8-1build1_s390x.ddeb dpkg-genbuildinfo --build=any -O../delly_1.1.8-1build1_s390x.buildinfo dpkg-genchanges --build=any -mLaunchpad Build Daemon -O../delly_1.1.8-1build1_s390x.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2023-12-19T19:38:25Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ delly_1.1.8-1build1_s390x.changes: ---------------------------------- Format: 1.8 Date: Tue, 19 Dec 2023 15:48:50 +0100 Source: delly Binary: delly Built-For-Profiles: noudeb Architecture: s390x Version: 1.1.8-1build1 Distribution: noble-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Matthias Klose Description: delly - Structural variant discovery by read analysis Changes: delly (1.1.8-1build1) noble; urgency=medium . * No-change rebuild for boost defaults change. Checksums-Sha1: a978d4007e0b44b2e70f3e72b6f6878f5eca73ea 5125252 delly-dbgsym_1.1.8-1build1_s390x.ddeb 61cd161e1e977f3cbac184c83149b11a79ab54fd 7444 delly_1.1.8-1build1_s390x.buildinfo 8b6d3aacd77985c40b1d4ea3bbc4d31926a79908 463470 delly_1.1.8-1build1_s390x.deb Checksums-Sha256: 1cf24e9f24c6832b03ca055eccc29b96573e1d7b58691dea59b95ee15316558f 5125252 delly-dbgsym_1.1.8-1build1_s390x.ddeb d465295dfe372b92c281ce61c78a0f35f93a4cf67773140f900cc1585ed82639 7444 delly_1.1.8-1build1_s390x.buildinfo 62ab31c91ad21077157334216144f85387ea5eae1c95d9eabe85f63037281b0c 463470 delly_1.1.8-1build1_s390x.deb Files: 1c90c19f98de1d43435ddee99323f83d 5125252 debug optional delly-dbgsym_1.1.8-1build1_s390x.ddeb 0f5c64b1d92e609a5e87baeb9d52d983 7444 science optional delly_1.1.8-1build1_s390x.buildinfo ba6bd30a452c5a8a26853e8fe2d88bac 463470 science optional delly_1.1.8-1build1_s390x.deb /<>/delly_1.1.8-1build1_s390x.changes.new could not be renamed to /<>/delly_1.1.8-1build1_s390x.changes: Illegal seek Distribution field may be wrong!!! +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: delly Binary: delly delly-dbgsym Architecture: s390x Version: 1.1.8-1build1 Checksums-Md5: 1c90c19f98de1d43435ddee99323f83d 5125252 delly-dbgsym_1.1.8-1build1_s390x.ddeb ba6bd30a452c5a8a26853e8fe2d88bac 463470 delly_1.1.8-1build1_s390x.deb Checksums-Sha1: a978d4007e0b44b2e70f3e72b6f6878f5eca73ea 5125252 delly-dbgsym_1.1.8-1build1_s390x.ddeb 8b6d3aacd77985c40b1d4ea3bbc4d31926a79908 463470 delly_1.1.8-1build1_s390x.deb Checksums-Sha256: 1cf24e9f24c6832b03ca055eccc29b96573e1d7b58691dea59b95ee15316558f 5125252 delly-dbgsym_1.1.8-1build1_s390x.ddeb 62ab31c91ad21077157334216144f85387ea5eae1c95d9eabe85f63037281b0c 463470 delly_1.1.8-1build1_s390x.deb Build-Origin: Ubuntu Build-Architecture: s390x Build-Date: Tue, 19 Dec 2023 19:38:24 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs usr-local-has-programs Installed-Build-Depends: autoconf (= 2.71-3), automake (= 1:1.16.5-1.3), autopoint (= 0.21-14), autotools-dev (= 20220109.1), base-files (= 13ubuntu5), base-passwd (= 3.6.3), bash (= 5.2.21-2ubuntu1), binutils (= 2.41.50.20231214-1ubuntu1), binutils-common (= 2.41.50.20231214-1ubuntu1), binutils-s390x-linux-gnu (= 2.41.50.20231214-1ubuntu1), bsdextrautils (= 2.39.2-6ubuntu1), bsdutils (= 1:2.39.2-6ubuntu1), build-essential (= 12.10ubuntu1), bzip2 (= 1.0.8-5build1), chrpath (= 0.16-2), coreutils (= 9.4-2ubuntu1), cpp (= 4:13.2.0-2ubuntu1), cpp-13 (= 13.2.0-9ubuntu1), dash (= 0.5.12-6ubuntu1), debconf (= 1.5.82), debhelper (= 13.11.8ubuntu1), debianutils (= 5.14), debugedit (= 1:5.0-5), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.13.1-1), diffutils (= 1:3.10-1), dpkg (= 1.22.1ubuntu5), dpkg-dev (= 1.22.1ubuntu5), dwz (= 0.15-1), file (= 1:5.45-2), findutils (= 4.9.0-5), g++ (= 4:13.2.0-2ubuntu1), g++-13 (= 13.2.0-9ubuntu1), gcc (= 4:13.2.0-2ubuntu1), gcc-13 (= 13.2.0-9ubuntu1), gcc-13-base (= 13.2.0-9ubuntu1), gettext (= 0.21-14), gettext-base (= 0.21-14), grep (= 3.11-3), groff-base (= 1.23.0-3), gzip (= 1.12-1ubuntu1), hostname (= 3.23+nmu1ubuntu1), icu-devtools (= 74.2-1ubuntu1), init-system-helpers (= 1.66ubuntu1), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.1-3), libarchive-zip-perl (= 1.68-1), libasan8 (= 13.2.0-9ubuntu1), libatomic1 (= 13.2.0-9ubuntu1), libattr1 (= 1:2.5.1-4), libaudit-common (= 1:3.1.2-1), libaudit1 (= 1:3.1.2-1), libbinutils (= 2.41.50.20231214-1ubuntu1), libblkid1 (= 2.39.2-6ubuntu1), libboost-atomic1.83-dev (= 1.83.0-1ubuntu3), libboost-atomic1.83.0 (= 1.83.0-1ubuntu3), libboost-date-time-dev (= 1.83.0.1ubuntu2), libboost-date-time1.83-dev (= 1.83.0-1ubuntu3), libboost-date-time1.83.0 (= 1.83.0-1ubuntu3), libboost-filesystem-dev (= 1.83.0.1ubuntu2), libboost-filesystem1.83-dev (= 1.83.0-1ubuntu3), libboost-filesystem1.83.0 (= 1.83.0-1ubuntu3), libboost-iostreams-dev (= 1.83.0.1ubuntu2), libboost-iostreams1.83-dev (= 1.83.0-1ubuntu3), libboost-iostreams1.83.0 (= 1.83.0-1ubuntu3), libboost-program-options-dev (= 1.83.0.1ubuntu2), libboost-program-options1.83-dev (= 1.83.0-1ubuntu3), libboost-program-options1.83.0 (= 1.83.0-1ubuntu3), libboost-regex1.83-dev (= 1.83.0-1ubuntu3), libboost-regex1.83.0 (= 1.83.0-1ubuntu3), libboost-serialization1.83-dev (= 1.83.0-1ubuntu3), libboost-serialization1.83.0 (= 1.83.0-1ubuntu3), libboost-system-dev (= 1.83.0.1ubuntu2), libboost-system1.83-dev (= 1.83.0-1ubuntu3), libboost-system1.83.0 (= 1.83.0-1ubuntu3), libboost1.83-dev (= 1.83.0-1ubuntu3), libbrotli1 (= 1.1.0-2), libbz2-1.0 (= 1.0.8-5build1), libbz2-dev (= 1.0.8-5build1), libc-bin (= 2.38-3ubuntu1), libc-dev-bin (= 2.38-3ubuntu1), libc6 (= 2.38-3ubuntu1), libc6-dev (= 2.38-3ubuntu1), libcap-ng0 (= 0.8.3-3), libcap2 (= 1:2.66-4ubuntu1), libcc1-0 (= 13.2.0-9ubuntu1), libcom-err2 (= 1.47.0-2ubuntu1), libcrypt-dev (= 1:4.4.36-2), libcrypt1 (= 1:4.4.36-2), libctf-nobfd0 (= 2.41.50.20231214-1ubuntu1), libctf0 (= 2.41.50.20231214-1ubuntu1), libcurl3-gnutls (= 8.4.0-2ubuntu1), libcurl4-gnutls-dev (= 8.4.0-2ubuntu1), libdb5.3 (= 5.3.28+dfsg2-4), libdebconfclient0 (= 0.271ubuntu1), libdebhelper-perl (= 13.11.8ubuntu1), libdeflate-dev (= 1.18-1), libdeflate0 (= 1.18-1), libdpkg-perl (= 1.22.1ubuntu5), libdw1 (= 0.190-1), libelf1 (= 0.190-1), libffi8 (= 3.4.4-2), libfile-stripnondeterminism-perl (= 1.13.1-1), libgcc-13-dev (= 13.2.0-9ubuntu1), libgcc-s1 (= 13.2.0-9ubuntu1), libgcrypt20 (= 1.10.2-3ubuntu1), libgdbm-compat4 (= 1.23-5), libgdbm6 (= 1.23-5), libgmp10 (= 2:6.3.0+dfsg-2ubuntu4), libgnutls30 (= 3.8.1-4ubuntu6), libgomp1 (= 13.2.0-9ubuntu1), libgpg-error0 (= 1.47-3build1), libgssapi-krb5-2 (= 1.20.1-5build1), libhogweed6 (= 3.9.1-2), libhts-dev (= 1.18+ds-1), libhts3 (= 1.18+ds-1), libhtscodecs2 (= 1.6.0-1), libicu-dev (= 74.2-1ubuntu1), libicu74 (= 74.2-1ubuntu1), libidn2-0 (= 2.3.4-1build1), libisl23 (= 0.26-3), libitm1 (= 13.2.0-9ubuntu1), libjansson4 (= 2.14-2), libk5crypto3 (= 1.20.1-5build1), libkeyutils1 (= 1.6.3-2), libkrb5-3 (= 1.20.1-5build1), libkrb5support0 (= 1.20.1-5build1), libldap2 (= 2.6.6+dfsg-1~exp1ubuntu1), liblz4-1 (= 1.9.4-1), liblzma-dev (= 5.4.5-0.1), liblzma5 (= 5.4.5-0.1), libmagic-mgc (= 1:5.45-2), libmagic1 (= 1:5.45-2), libmd0 (= 1.1.0-1), libmount1 (= 2.39.2-6ubuntu1), libmpc3 (= 1.3.1-1), libmpfr6 (= 4.2.1-1), libnettle8 (= 3.9.1-2), libnghttp2-14 (= 1.58.0-1), libnsl-dev (= 1.3.0-3), libnsl2 (= 1.3.0-3), libp11-kit0 (= 0.25.3-2ubuntu2), libpam-modules (= 1.5.2-9.1ubuntu1), libpam-modules-bin (= 1.5.2-9.1ubuntu1), libpam-runtime (= 1.5.2-9.1ubuntu1), libpam0g (= 1.5.2-9.1ubuntu1), libpcre2-8-0 (= 10.42-4ubuntu1), libperl5.36 (= 5.36.0-10ubuntu1), libpipeline1 (= 1.5.7-1), libpsl5 (= 0.21.2-1build1), librtmp1 (= 2.4+20151223.gitfa8646d.1-2build4), libsasl2-2 (= 2.1.28+dfsg1-4), libsasl2-modules-db (= 2.1.28+dfsg1-4), libseccomp2 (= 2.5.4-2ubuntu1), libselinux1 (= 3.5-1build2), libsframe1 (= 2.41.50.20231214-1ubuntu1), libsmartcols1 (= 2.39.2-6ubuntu1), libssh-4 (= 0.10.5-3ubuntu2), libssl3 (= 3.0.10-1ubuntu3), libstdc++-13-dev (= 13.2.0-9ubuntu1), libstdc++6 (= 13.2.0-9ubuntu1), libsub-override-perl (= 0.10-1), libsystemd0 (= 255-1ubuntu1), libtasn1-6 (= 4.19.0-3), libtinfo6 (= 6.4+20231209-1), libtirpc-common (= 1.3.4+ds-1), libtirpc-dev (= 1.3.4+ds-1), libtirpc3 (= 1.3.4+ds-1), libtool (= 2.4.7-7), libubsan1 (= 13.2.0-9ubuntu1), libuchardet0 (= 0.0.8-1), libudev1 (= 255-1ubuntu1), libunistring5 (= 1.1-2), libuuid1 (= 2.39.2-6ubuntu1), libxml2 (= 2.9.14+dfsg-1.3build3), libzstd1 (= 1.5.5+dfsg2-2), linux-libc-dev (= 6.6.0-14.14), login (= 1:4.13+dfsg1-3ubuntu1), lto-disabled-list (= 44), m4 (= 1.4.19-4), make (= 4.3-4.1build1), man-db (= 2.12.0-1), mawk (= 1.3.4.20231126-1), ncurses-base (= 6.4+20231209-1), ncurses-bin (= 6.4+20231209-1), patch (= 2.7.6-7build2), perl (= 5.36.0-10ubuntu1), perl-base (= 5.36.0-10ubuntu1), perl-modules-5.36 (= 5.36.0-10ubuntu1), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.2-0ubuntu6), sed (= 4.9-1), sensible-utils (= 0.0.20), sysvinit-utils (= 3.08-3ubuntu1), tar (= 1.34+dfsg-1.2ubuntu2), util-linux (= 2.39.2-6ubuntu1), xz-utils (= 5.4.5-0.1), zlib1g (= 1:1.3.dfsg-3ubuntu1), zlib1g-dev (= 1:1.3.dfsg-3ubuntu1) Environment: DEB_BUILD_OPTIONS="parallel=4" DEB_BUILD_PROFILES="noudeb" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1702997330" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ delly_1.1.8-1build1_s390x.deb ----------------------------- new Debian package, version 2.0. size 463470 bytes: control archive=884 bytes. 1029 bytes, 17 lines control 312 bytes, 5 lines md5sums Package: delly Version: 1.1.8-1build1 Architecture: s390x Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 1179 Depends: libboost-filesystem1.83.0 (>= 1.83.0), libboost-iostreams1.83.0 (>= 1.83.0), libboost-program-options1.83.0 (>= 1.83.0), libc6 (>= 2.34), libgcc-s1 (>= 3.3.1), libgomp1 (>= 4.9), libhts3 (>= 1.17), libstdc++6 (>= 13.1) Section: science Priority: optional Homepage: https://github.com/dellytools/delly Description: Structural variant discovery by read analysis Delly performs Structural variant discovery by integrated paired-end and split-read analysis. It discovers, genotypes and visualizes deletions, tandem duplications, inversions and translocations at single-nucleotide resolution in short-read massively parallel sequencing data. It uses paired-ends, split-reads and read-depth to sensitively and accurately delineate genomic rearrangements throughout the genome. drwxr-xr-x root/root 0 2023-12-19 14:48 ./ drwxr-xr-x root/root 0 2023-12-19 14:48 ./usr/ drwxr-xr-x root/root 0 2023-12-19 14:48 ./usr/bin/ -rwxr-xr-x root/root 1190024 2023-12-19 14:48 ./usr/bin/delly drwxr-xr-x root/root 0 2023-12-19 14:48 ./usr/share/ drwxr-xr-x root/root 0 2023-12-19 14:48 ./usr/share/doc/ drwxr-xr-x root/root 0 2023-12-19 14:48 ./usr/share/doc/delly/ -rw-r--r-- root/root 1195 2023-12-19 14:48 ./usr/share/doc/delly/changelog.Debian.gz -rw-r--r-- root/root 2645 2023-10-12 14:39 ./usr/share/doc/delly/copyright drwxr-xr-x root/root 0 2023-12-19 14:48 ./usr/share/man/ drwxr-xr-x root/root 0 2023-12-19 14:48 ./usr/share/man/man1/ -rw-r--r-- root/root 291 2023-12-19 14:48 ./usr/share/man/man1/delly.1.gz -rw-r--r-- root/root 336 2023-12-19 14:48 ./usr/share/man/man1/dpe.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: s390x Build Type: any Build-Space: 34596 Build-Time: 116 Distribution: noble-proposed Host Architecture: s390x Install-Time: 25 Job: delly_1.1.8-1build1.dsc Machine Architecture: s390x Package: delly Package-Time: 141 Source-Version: 1.1.8-1build1 Space: 34596 Status: successful Version: 1.1.8-1build1 -------------------------------------------------------------------------------- Finished at 2023-12-19T19:38:25Z Build needed 00:02:21, 34596k disk space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=noble --arch=s390x PACKAGEBUILD-27576347 Scanning for processes to kill in build PACKAGEBUILD-27576347