https://launchpad.net/ubuntu/+source/dipy/1.8.0-2ubuntu1/+build/27766904 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux lcy02-amd64-070 5.4.0-171-generic #189-Ubuntu SMP Fri Jan 5 14:23:02 UTC 2024 x86_64 Buildd toolchain package versions: launchpad-buildd_235~645~ubuntu20.04.1 python3-lpbuildd_235~645~ubuntu20.04.1 sbuild_0.79.0-1ubuntu1 git-build-recipe_0.3.6 git_1:2.25.1-1ubuntu3.11 dpkg-dev_1.19.7ubuntu3.2 python3-debian_0.1.36ubuntu1.1. Syncing the system clock with the buildd NTP service... 12 Feb 20:24:47 ntpdate[1835]: adjust time server 10.131.248.1 offset 0.000099 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=noble --arch=amd64 PACKAGEBUILD-27766904 --image-type chroot /home/buildd/filecache-default/1fe94ca8758119221c8de2550665a1bb335bd6a9 Creating target for build PACKAGEBUILD-27766904 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=noble --arch=amd64 PACKAGEBUILD-27766904 Starting target for build PACKAGEBUILD-27766904 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=noble --arch=amd64 PACKAGEBUILD-27766904 'deb http://ftpmaster.internal/ubuntu noble main universe' 'deb http://ftpmaster.internal/ubuntu noble-security main universe' 'deb http://ftpmaster.internal/ubuntu noble-updates main universe' 'deb http://ftpmaster.internal/ubuntu noble-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-27766904 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=noble --arch=amd64 PACKAGEBUILD-27766904 Updating target for build PACKAGEBUILD-27766904 Get:1 http://ftpmaster.internal/ubuntu noble InRelease [256 kB] Get:2 http://ftpmaster.internal/ubuntu noble-security InRelease [90.7 kB] Get:3 http://ftpmaster.internal/ubuntu noble-updates InRelease [90.7 kB] Get:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease [118 kB] Get:5 http://ftpmaster.internal/ubuntu noble/main amd64 Packages [1430 kB] Get:6 http://ftpmaster.internal/ubuntu noble/main Translation-en [518 kB] Get:7 http://ftpmaster.internal/ubuntu noble/universe amd64 Packages [15.1 MB] Get:8 http://ftpmaster.internal/ubuntu noble/universe Translation-en [6019 kB] Get:9 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 Packages [228 kB] Get:10 http://ftpmaster.internal/ubuntu noble-proposed/main Translation-en [79.3 kB] Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 Packages [1004 kB] Get:12 http://ftpmaster.internal/ubuntu noble-proposed/universe Translation-en [374 kB] Fetched 25.3 MB in 3s (9052 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libperl5.36 libunistring2 perl-modules-5.36 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: cpp-13-x86-64-linux-gnu cpp-x86-64-linux-gnu g++-13-x86-64-linux-gnu g++-x86-64-linux-gnu gcc-13-x86-64-linux-gnu gcc-14-base gcc-x86-64-linux-gnu libperl5.38 libunistring5 perl-modules-5.38 The following packages will be upgraded: apt apt-utils base-files base-passwd bash bash-completion binutils binutils-common binutils-x86-64-linux-gnu bsdextrautils bsdutils ca-certificates coreutils cpp cpp-13 debconf debconf-i18n debianutils diffutils dpkg dpkg-dev fakeroot g++ g++-13 gcc gcc-13 gcc-13-base grep init init-system-helpers krb5-locales libacl1 libapparmor1 libapt-pkg6.0 libargon2-1 libasan8 libatomic1 libattr1 libaudit-common libaudit1 libbinutils libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcc1-0 libcrypt-dev libcrypt1 libcryptsetup12 libctf-nobfd0 libctf0 libdb5.3 libdebconfclient0 libdpkg-perl libfakeroot libfdisk1 libffi8 libgcc-13-dev libgcc-s1 libgcrypt20 libgdbm-compat4 libgdbm6 libgnutls30 libgomp1 libgpg-error-l10n libgpg-error0 libgprofng0 libgssapi-krb5-2 libhwasan0 libidn2-0 libitm1 libk5crypto3 libkmod2 libkrb5-3 libkrb5support0 liblocale-gettext-perl liblsan0 liblzma5 libmd0 libmount1 libncursesw6 libnsl-dev libnsl2 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpcre2-8-0 libperl5.36 libpng16-16 libproc2-0 libquadmath0 libreadline8 libseccomp2 libselinux1 libsemanage-common libsemanage2 libsepol2 libsframe1 libsmartcols1 libsqlite3-0 libssl3 libstdc++-13-dev libstdc++6 libsystemd-shared libsystemd0 libtext-charwidth-perl libtext-iconv-perl libtinfo6 libtirpc-common libtirpc-dev libtirpc3 libtsan2 libubsan1 libudev1 libuuid1 libxxhash0 libzstd1 linux-libc-dev login lto-disabled-list mawk mount ncurses-base ncurses-bin openssl optipng passwd perl perl-base perl-modules-5.36 pinentry-curses procps psmisc readline-common sed systemd systemd-dev systemd-sysv sysvinit-utils tar tzdata ubuntu-keyring util-linux uuid-runtime xz-utils zlib1g 150 upgraded, 10 newly installed, 0 to remove and 0 not upgraded. Need to get 124 MB of archives. After this operation, 77.9 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu noble/main amd64 libnsl-dev amd64 1.3.0-3 [71.2 kB] Get:2 http://ftpmaster.internal/ubuntu noble/main amd64 libcrypt-dev amd64 1:4.4.36-4 [128 kB] Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libc6-dev amd64 2.39-0ubuntu1 [2126 kB] Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libc-dev-bin amd64 2.39-0ubuntu1 [20.4 kB] Get:5 http://ftpmaster.internal/ubuntu noble/main amd64 libtirpc-common all 1.3.4+ds-1build1 [8566 B] Get:6 http://ftpmaster.internal/ubuntu noble/main amd64 libtirpc-dev amd64 1.3.4+ds-1build1 [222 kB] Get:7 http://ftpmaster.internal/ubuntu noble/main amd64 libgssapi-krb5-2 amd64 1.20.1-5build1 [142 kB] Get:8 http://ftpmaster.internal/ubuntu noble/main amd64 libkrb5-3 amd64 1.20.1-5build1 [346 kB] Get:9 http://ftpmaster.internal/ubuntu noble/main amd64 libk5crypto3 amd64 1.20.1-5build1 [81.3 kB] Get:10 http://ftpmaster.internal/ubuntu noble/main amd64 libkrb5support0 amd64 1.20.1-5build1 [33.2 kB] Get:11 http://ftpmaster.internal/ubuntu noble/main amd64 libssl3 amd64 3.0.10-1ubuntu4 [1909 kB] Get:12 http://ftpmaster.internal/ubuntu noble/main amd64 libtirpc3 amd64 1.3.4+ds-1build1 [95.7 kB] Get:13 http://ftpmaster.internal/ubuntu noble/main amd64 libnsl2 amd64 1.3.0-3 [41.3 kB] Get:14 http://ftpmaster.internal/ubuntu noble/main amd64 libcrypt1 amd64 1:4.4.36-4 [95.3 kB] Get:15 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 linux-libc-dev amd64 6.8.0-7.7 [1594 kB] Get:16 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libc6 amd64 2.39-0ubuntu1 [3261 kB] Get:17 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libc-bin amd64 2.39-0ubuntu1 [679 kB] Get:18 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-14-base amd64 14-20240201-3ubuntu1 [46.4 kB] Get:19 http://ftpmaster.internal/ubuntu noble/main amd64 libgcc-s1 amd64 14-20240201-3ubuntu1 [77.5 kB] Get:20 http://ftpmaster.internal/ubuntu noble/main amd64 base-files amd64 13ubuntu6 [84.5 kB] Get:21 http://ftpmaster.internal/ubuntu noble/main amd64 debianutils amd64 5.16 [93.9 kB] Get:22 http://ftpmaster.internal/ubuntu noble/main amd64 bash amd64 5.2.21-2ubuntu1 [795 kB] Get:23 http://ftpmaster.internal/ubuntu noble/main amd64 bsdutils amd64 1:2.39.2-6ubuntu1 [93.9 kB] Get:24 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 coreutils amd64 9.4-2ubuntu3 [1412 kB] Get:25 http://ftpmaster.internal/ubuntu noble/main amd64 diffutils amd64 1:3.10-1 [176 kB] Get:26 http://ftpmaster.internal/ubuntu noble/main amd64 libgpg-error-l10n all 1.47-3build1 [8024 B] Get:27 http://ftpmaster.internal/ubuntu noble/main amd64 libgpg-error0 amd64 1.47-3build1 [70.0 kB] Get:28 http://ftpmaster.internal/ubuntu noble/main amd64 libgcrypt20 amd64 1.10.3-2 [532 kB] Get:29 http://ftpmaster.internal/ubuntu noble/main amd64 liblzma5 amd64 5.4.5-0.3 [141 kB] Get:30 http://ftpmaster.internal/ubuntu noble/main amd64 libstdc++6 amd64 14-20240201-3ubuntu1 [795 kB] Get:31 http://ftpmaster.internal/ubuntu noble/main amd64 libacl1 amd64 2.3.1-4ubuntu1 [18.6 kB] Get:32 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libapparmor1 amd64 4.0.0~alpha4-0ubuntu1 [49.0 kB] Get:33 http://ftpmaster.internal/ubuntu noble/main amd64 libaudit-common all 1:3.1.2-2 [5594 B] Get:34 http://ftpmaster.internal/ubuntu noble/main amd64 libcap-ng0 amd64 0.8.4-1 [16.8 kB] Get:35 http://ftpmaster.internal/ubuntu noble/main amd64 libaudit1 amd64 1:3.1.2-2 [46.7 kB] Get:36 http://ftpmaster.internal/ubuntu noble/main amd64 libblkid1 amd64 2.39.2-6ubuntu1 [122 kB] Get:37 http://ftpmaster.internal/ubuntu noble/main amd64 libzstd1 amd64 1.5.5+dfsg2-2 [297 kB] Get:38 http://ftpmaster.internal/ubuntu noble/main amd64 libkmod2 amd64 30+20230601-2ubuntu1 [51.4 kB] Get:39 http://ftpmaster.internal/ubuntu noble/main amd64 libpcre2-8-0 amd64 10.42-4ubuntu1 [228 kB] Get:40 http://ftpmaster.internal/ubuntu noble/main amd64 libselinux1 amd64 3.5-2build1 [79.2 kB] Get:41 http://ftpmaster.internal/ubuntu noble/main amd64 libmount1 amd64 2.39.2-6ubuntu1 [132 kB] Get:42 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libtext-iconv-perl amd64 1.7-8build1 [13.4 kB] Get:43 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libtext-charwidth-perl amd64 0.04-11build1 [9266 B] Get:44 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 perl-modules-5.38 all 5.38.2-3 [3110 kB] Get:45 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libperl5.38 amd64 5.38.2-3 [4871 kB] Get:46 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 perl amd64 5.38.2-3 [231 kB] Get:47 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 perl-base amd64 5.38.2-3 [1823 kB] Get:48 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 liblocale-gettext-perl amd64 1.07-6build1 [15.5 kB] Get:49 http://ftpmaster.internal/ubuntu noble/main amd64 perl-modules-5.36 all 5.36.0-10ubuntu1 [2984 kB] Get:50 http://ftpmaster.internal/ubuntu noble/main amd64 libperl5.36 amd64 5.36.0-10ubuntu1 [4782 kB] Get:51 http://ftpmaster.internal/ubuntu noble/main amd64 libdb5.3 amd64 5.3.28+dfsg2-4 [736 kB] Get:52 http://ftpmaster.internal/ubuntu noble/main amd64 libgdbm6 amd64 1.23-5 [33.3 kB] Get:53 http://ftpmaster.internal/ubuntu noble/main amd64 libgdbm-compat4 amd64 1.23-5 [6498 B] Get:54 http://ftpmaster.internal/ubuntu noble/main amd64 zlib1g amd64 1:1.3.dfsg-3ubuntu1 [63.3 kB] Get:55 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 debconf-i18n all 1.5.85 [205 kB] Get:56 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 debconf all 1.5.85 [124 kB] Get:57 http://ftpmaster.internal/ubuntu noble/main amd64 libpam0g amd64 1.5.2-9.1ubuntu2 [65.7 kB] Get:58 http://ftpmaster.internal/ubuntu noble/main amd64 libseccomp2 amd64 2.5.5-1ubuntu1 [50.3 kB] Get:59 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 systemd-sysv amd64 255.2-3ubuntu2 [11.9 kB] Get:60 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 systemd-dev all 255.2-3ubuntu2 [101 kB] Get:61 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 systemd amd64 255.2-3ubuntu2 [3466 kB] Get:62 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libsystemd-shared amd64 255.2-3ubuntu2 [2064 kB] Get:63 http://ftpmaster.internal/ubuntu noble/main amd64 libargon2-1 amd64 0~20190702+dfsg-4 [21.4 kB] Get:64 http://ftpmaster.internal/ubuntu noble/main amd64 libuuid1 amd64 2.39.2-6ubuntu1 [34.1 kB] Get:65 http://ftpmaster.internal/ubuntu noble/main amd64 libcryptsetup12 amd64 2:2.6.1-6ubuntu1 [242 kB] Get:66 http://ftpmaster.internal/ubuntu noble/main amd64 libfdisk1 amd64 2.39.2-6ubuntu1 [145 kB] Get:67 http://ftpmaster.internal/ubuntu noble/main amd64 mount amd64 2.39.2-6ubuntu1 [118 kB] Get:68 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libsystemd0 amd64 255.2-3ubuntu2 [426 kB] Get:69 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libudev1 amd64 255.2-3ubuntu2 [172 kB] Get:70 http://ftpmaster.internal/ubuntu noble/main amd64 libxxhash0 amd64 0.8.2-2 [25.5 kB] Get:71 http://ftpmaster.internal/ubuntu noble/main amd64 libapt-pkg6.0 amd64 2.7.10 [980 kB] Get:72 http://ftpmaster.internal/ubuntu noble/main amd64 tar amd64 1.35+dfsg-3 [253 kB] Get:73 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 dpkg amd64 1.22.4ubuntu2 [1284 kB] Get:74 http://ftpmaster.internal/ubuntu noble/main amd64 grep amd64 3.11-4 [176 kB] Get:75 http://ftpmaster.internal/ubuntu noble/main amd64 login amd64 1:4.13+dfsg1-3ubuntu1 [201 kB] Get:76 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 ncurses-bin amd64 6.4+20240113-1 [188 kB] Get:77 http://ftpmaster.internal/ubuntu noble/main amd64 sed amd64 4.9-2 [204 kB] Get:78 http://ftpmaster.internal/ubuntu noble/main amd64 util-linux amd64 2.39.2-6ubuntu1 [1120 kB] Get:79 http://ftpmaster.internal/ubuntu noble/main amd64 libdebconfclient0 amd64 0.271ubuntu1 [11.3 kB] Get:80 http://ftpmaster.internal/ubuntu noble/main amd64 base-passwd amd64 3.6.3 [51.2 kB] Get:81 http://ftpmaster.internal/ubuntu noble/main amd64 init-system-helpers all 1.66ubuntu1 [39.4 kB] Get:82 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 ncurses-base all 6.4+20240113-1 [25.4 kB] Get:83 http://ftpmaster.internal/ubuntu noble/main amd64 sysvinit-utils amd64 3.08-3ubuntu1 [33.7 kB] Get:84 http://ftpmaster.internal/ubuntu noble/main amd64 apt amd64 2.7.10 [1371 kB] Get:85 http://ftpmaster.internal/ubuntu noble/main amd64 apt-utils amd64 2.7.10 [217 kB] Get:86 http://ftpmaster.internal/ubuntu noble/main amd64 ubuntu-keyring all 2023.11.28.1 [11.1 kB] Get:87 http://ftpmaster.internal/ubuntu noble/main amd64 libffi8 amd64 3.4.4-2 [24.4 kB] Get:88 http://ftpmaster.internal/ubuntu noble/main amd64 libp11-kit0 amd64 0.25.3-4ubuntu1 [299 kB] Get:89 http://ftpmaster.internal/ubuntu noble/main amd64 libunistring5 amd64 1.1-2 [537 kB] Get:90 http://ftpmaster.internal/ubuntu noble/main amd64 libidn2-0 amd64 2.3.7-2 [66.0 kB] Get:91 http://ftpmaster.internal/ubuntu noble/main amd64 libgnutls30 amd64 3.8.3-1ubuntu1 [996 kB] Get:92 http://ftpmaster.internal/ubuntu noble/main amd64 libpam-modules-bin amd64 1.5.2-9.1ubuntu2 [48.3 kB] Get:93 http://ftpmaster.internal/ubuntu noble/main amd64 libpam-modules amd64 1.5.2-9.1ubuntu2 [285 kB] Get:94 http://ftpmaster.internal/ubuntu noble/main amd64 init amd64 1.66ubuntu1 [6186 B] Get:95 http://ftpmaster.internal/ubuntu noble/main amd64 libsmartcols1 amd64 2.39.2-6ubuntu1 [63.3 kB] Get:96 http://ftpmaster.internal/ubuntu noble/main amd64 uuid-runtime amd64 2.39.2-6ubuntu1 [32.9 kB] Get:97 http://ftpmaster.internal/ubuntu noble/main amd64 libattr1 amd64 1:2.5.2-1 [11.4 kB] Get:98 http://ftpmaster.internal/ubuntu noble/main amd64 libmd0 amd64 1.1.0-2 [27.1 kB] Get:99 http://ftpmaster.internal/ubuntu noble/main amd64 libpam-runtime all 1.5.2-9.1ubuntu2 [40.6 kB] Get:100 http://ftpmaster.internal/ubuntu noble/main amd64 libsemanage-common all 3.5-1build2 [10.0 kB] Get:101 http://ftpmaster.internal/ubuntu noble/main amd64 libsepol2 amd64 3.5-2 [300 kB] Get:102 http://ftpmaster.internal/ubuntu noble/main amd64 libsemanage2 amd64 3.5-1build2 [92.9 kB] Get:103 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libncursesw6 amd64 6.4+20240113-1 [148 kB] Get:104 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libtinfo6 amd64 6.4+20240113-1 [108 kB] Get:105 http://ftpmaster.internal/ubuntu noble/main amd64 passwd amd64 1:4.13+dfsg1-3ubuntu1 [844 kB] Get:106 http://ftpmaster.internal/ubuntu noble/main amd64 g++-13 amd64 13.2.0-13ubuntu1 [14.0 kB] Get:107 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-13 amd64 13.2.0-13ubuntu1 [473 kB] Get:108 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-13 amd64 13.2.0-13ubuntu1 [1032 B] Get:109 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-13-x86-64-linux-gnu amd64 13.2.0-13ubuntu1 [11.2 MB] Get:110 http://ftpmaster.internal/ubuntu noble/main amd64 libcc1-0 amd64 14-20240201-3ubuntu1 [47.5 kB] Get:111 http://ftpmaster.internal/ubuntu noble/main amd64 libgprofng0 amd64 2.42-2ubuntu1 [851 kB] Get:112 http://ftpmaster.internal/ubuntu noble/main amd64 libctf0 amd64 2.42-2ubuntu1 [94.6 kB] Get:113 http://ftpmaster.internal/ubuntu noble/main amd64 libctf-nobfd0 amd64 2.42-2ubuntu1 [96.8 kB] Get:114 http://ftpmaster.internal/ubuntu noble/main amd64 libsframe1 amd64 2.42-2ubuntu1 [14.5 kB] Get:115 http://ftpmaster.internal/ubuntu noble/main amd64 binutils-x86-64-linux-gnu amd64 2.42-2ubuntu1 [2467 kB] Get:116 http://ftpmaster.internal/ubuntu noble/main amd64 libbinutils amd64 2.42-2ubuntu1 [571 kB] Get:117 http://ftpmaster.internal/ubuntu noble/main amd64 binutils amd64 2.42-2ubuntu1 [18.1 kB] Get:118 http://ftpmaster.internal/ubuntu noble/main amd64 binutils-common amd64 2.42-2ubuntu1 [239 kB] Get:119 http://ftpmaster.internal/ubuntu noble/main amd64 libstdc++-13-dev amd64 13.2.0-13ubuntu1 [2337 kB] Get:120 http://ftpmaster.internal/ubuntu noble/main amd64 libgomp1 amd64 14-20240201-3ubuntu1 [147 kB] Get:121 http://ftpmaster.internal/ubuntu noble/main amd64 libitm1 amd64 14-20240201-3ubuntu1 [29.1 kB] Get:122 http://ftpmaster.internal/ubuntu noble/main amd64 libatomic1 amd64 14-20240201-3ubuntu1 [10.5 kB] Get:123 http://ftpmaster.internal/ubuntu noble/main amd64 libasan8 amd64 14-20240201-3ubuntu1 [3026 kB] Get:124 http://ftpmaster.internal/ubuntu noble/main amd64 liblsan0 amd64 14-20240201-3ubuntu1 [1309 kB] Get:125 http://ftpmaster.internal/ubuntu noble/main amd64 libgcc-13-dev amd64 13.2.0-13ubuntu1 [2687 kB] Get:126 http://ftpmaster.internal/ubuntu noble/main amd64 libtsan2 amd64 14-20240201-3ubuntu1 [2731 kB] Get:127 http://ftpmaster.internal/ubuntu noble/main amd64 libubsan1 amd64 14-20240201-3ubuntu1 [1171 kB] Get:128 http://ftpmaster.internal/ubuntu noble/main amd64 libhwasan0 amd64 14-20240201-3ubuntu1 [1629 kB] Get:129 http://ftpmaster.internal/ubuntu noble/main amd64 libquadmath0 amd64 14-20240201-3ubuntu1 [155 kB] Get:130 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-13-x86-64-linux-gnu amd64 13.2.0-13ubuntu1 [21.8 MB] Get:131 http://ftpmaster.internal/ubuntu noble/main amd64 g++-13-x86-64-linux-gnu amd64 13.2.0-13ubuntu1 [12.5 MB] Get:132 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-13-base amd64 13.2.0-13ubuntu1 [46.6 kB] Get:133 http://ftpmaster.internal/ubuntu noble/main amd64 libproc2-0 amd64 2:4.0.4-2ubuntu1 [59.0 kB] Get:134 http://ftpmaster.internal/ubuntu noble/main amd64 mawk amd64 1.3.4.20240123-1 [127 kB] Get:135 http://ftpmaster.internal/ubuntu noble/main amd64 procps amd64 2:4.0.4-2ubuntu1 [708 kB] Get:136 http://ftpmaster.internal/ubuntu noble/main amd64 openssl amd64 3.0.10-1ubuntu4 [1002 kB] Get:137 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 ca-certificates all 20240203 [159 kB] Get:138 http://ftpmaster.internal/ubuntu noble/main amd64 krb5-locales all 1.20.1-5build1 [13.7 kB] Get:139 http://ftpmaster.internal/ubuntu noble/main amd64 readline-common all 8.2-3 [56.2 kB] Get:140 http://ftpmaster.internal/ubuntu noble/main amd64 libreadline8 amd64 8.2-3 [152 kB] Get:141 http://ftpmaster.internal/ubuntu noble/main amd64 libsqlite3-0 amd64 3.45.1-1 [701 kB] Get:142 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 tzdata all 2024a-1ubuntu1 [273 kB] Get:143 http://ftpmaster.internal/ubuntu noble/main amd64 bash-completion all 1:2.11-8 [180 kB] Get:144 http://ftpmaster.internal/ubuntu noble/main amd64 bsdextrautils amd64 2.39.2-6ubuntu1 [73.5 kB] Get:145 http://ftpmaster.internal/ubuntu noble/main amd64 libpng16-16 amd64 1.6.42-1 [186 kB] Get:146 http://ftpmaster.internal/ubuntu noble/main amd64 psmisc amd64 23.6-2 [178 kB] Get:147 http://ftpmaster.internal/ubuntu noble/main amd64 xz-utils amd64 5.4.5-0.3 [276 kB] Get:148 http://ftpmaster.internal/ubuntu noble/main amd64 g++ amd64 4:13.2.0-7ubuntu1 [1100 B] Get:149 http://ftpmaster.internal/ubuntu noble/main amd64 gcc amd64 4:13.2.0-7ubuntu1 [5018 B] Get:150 http://ftpmaster.internal/ubuntu noble/main amd64 cpp amd64 4:13.2.0-7ubuntu1 [22.4 kB] Get:151 http://ftpmaster.internal/ubuntu noble/main amd64 cpp-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [5326 B] Get:152 http://ftpmaster.internal/ubuntu noble/main amd64 gcc-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [1212 B] Get:153 http://ftpmaster.internal/ubuntu noble/main amd64 g++-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [964 B] Get:154 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 dpkg-dev all 1.22.4ubuntu2 [1078 kB] Get:155 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libdpkg-perl all 1.22.4ubuntu2 [269 kB] Get:156 http://ftpmaster.internal/ubuntu noble/main amd64 lto-disabled-list all 46 [12.3 kB] Get:157 http://ftpmaster.internal/ubuntu noble/main amd64 libfakeroot amd64 1.33-1 [32.4 kB] Get:158 http://ftpmaster.internal/ubuntu noble/main amd64 fakeroot amd64 1.33-1 [67.2 kB] Get:159 http://ftpmaster.internal/ubuntu noble/main amd64 optipng amd64 0.7.8+ds-1 [110 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Current default time zone: 'Etc/UTC' Local time is now: Mon Feb 12 20:25:11 UTC 2024. Universal Time is now: Mon Feb 12 20:25:11 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up fakeroot (1.33-1) ... Setting up perl-modules-5.36 (5.36.0-10ubuntu1) ... Setting up gcc-13-base:amd64 (13.2.0-13ubuntu1) ... Setting up bash-completion (1:2.11-8) ... Setting up xz-utils (5.4.5-0.3) ... Setting up perl-modules-5.38 (5.38.2-3) ... Setting up libquadmath0:amd64 (14-20240201-3ubuntu1) ... Setting up libproc2-0:amd64 (2:4.0.4-2ubuntu1) ... Setting up libpng16-16:amd64 (1.6.42-1) ... Setting up libatomic1:amd64 (14-20240201-3ubuntu1) ... Setting up libncursesw6:amd64 (6.4+20240113-1) ... Setting up libk5crypto3:amd64 (1.20.1-5build1) ... Setting up libubsan1:amd64 (14-20240201-3ubuntu1) ... Setting up uuid-runtime (2.39.2-6ubuntu1) ... Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of restart. 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Setting up cpp-13-x86-64-linux-gnu (13.2.0-13ubuntu1) ... Setting up libreadline8:amd64 (8.2-3) ... Setting up debconf-i18n (1.5.85) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... rehash: warning: skipping ca-certificates.crt,it does not contain exactly one certificate or CRL 14 added, 5 removed; done. Setting up libgprofng0:amd64 (2.42-2ubuntu1) ... Setting up optipng (0.7.8+ds-1) ... Setting up libgssapi-krb5-2:amd64 (1.20.1-5build1) ... Setting up libgdbm-compat4:amd64 (1.23-5) ... Setting up libgcc-13-dev:amd64 (13.2.0-13ubuntu1) ... Setting up libperl5.36:amd64 (5.36.0-10ubuntu1) ... Setting up binutils-x86-64-linux-gnu (2.42-2ubuntu1) ... Setting up cpp-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... Setting up libtirpc3:amd64 (1.3.4+ds-1build1) ... Setting up cpp-13 (13.2.0-13ubuntu1) ... Setting up gcc-13-x86-64-linux-gnu (13.2.0-13ubuntu1) ... Setting up libperl5.38:amd64 (5.38.2-3) ... Setting up binutils (2.42-2ubuntu1) ... Setting up perl (5.38.2-3) ... Setting up libtirpc-dev:amd64 (1.3.4+ds-1build1) ... Setting up gcc-13 (13.2.0-13ubuntu1) ... Setting up libdpkg-perl (1.22.4ubuntu2) ... Setting up cpp (4:13.2.0-7ubuntu1) ... Setting up libnsl2:amd64 (1.3.0-3) ... Setting up gcc-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... Setting up gcc (4:13.2.0-7ubuntu1) ... Setting up dpkg-dev (1.22.4ubuntu2) ... Setting up libnsl-dev:amd64 (1.3.0-3) ... Setting up libc6-dev:amd64 (2.39-0ubuntu1) ... Setting up libstdc++-13-dev:amd64 (13.2.0-13ubuntu1) ... Setting up g++-13-x86-64-linux-gnu (13.2.0-13ubuntu1) ... Setting up g++-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... Setting up g++-13 (13.2.0-13ubuntu1) ... Setting up g++ (4:13.2.0-7ubuntu1) ... Processing triggers for libc-bin (2.39-0ubuntu1) ... Processing triggers for debianutils (5.16) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-27766904 amd64 noble-proposed -c chroot:build-PACKAGEBUILD-27766904 --arch=amd64 --dist=noble-proposed --nolog -A dipy_1.8.0-2ubuntu1.dsc Initiating build PACKAGEBUILD-27766904 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 5.4.0-171-generic #189-Ubuntu SMP Fri Jan 5 14:23:02 UTC 2024 x86_64 sbuild (Debian sbuild) 0.79.0 (05 February 2020) on lcy02-amd64-070.buildd +==============================================================================+ | dipy 1.8.0-2ubuntu1 (amd64) Mon, 12 Feb 2024 20:25:14 +0000 | +==============================================================================+ Package: dipy Version: 1.8.0-2ubuntu1 Source Version: 1.8.0-2ubuntu1 Distribution: noble-proposed Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: binary I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-27766904/chroot-autobuild' with '<>' I: NOTICE: Log filtering will replace 'build/dipy-TO8oHh/resolver-BaR3pa' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- dipy_1.8.0-2ubuntu1.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/dipy-TO8oHh/dipy-1.8.0' with '<>' I: NOTICE: Log filtering will replace 'build/dipy-TO8oHh' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, libgomp1, cython3, python-is-python3, python3-all-dev, python3-setuptools, python3-mesonpy, python3-numpy, python3-scipy, python3-h5py, python3-matplotlib, python3-nibabel, python3-pil.imagetk, python3-pytest, python3-pandas, python3-tables, python3-tk, python3-trx-python, python3-sklearn, python3-tqdm, xvfb, xauth, build-essential, fakeroot, python3-sphinx, python3-numpydoc, python3-skimage, python3-sphinx-design Filtered Build-Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, libgomp1, cython3, python-is-python3, python3-all-dev, python3-setuptools, python3-mesonpy, python3-numpy, python3-scipy, python3-h5py, python3-matplotlib, python3-nibabel, python3-pil.imagetk, python3-pytest, python3-pandas, python3-tables, python3-tk, python3-trx-python, python3-sklearn, python3-tqdm, xvfb, xauth, build-essential, fakeroot, python3-sphinx, python3-numpydoc, python3-skimage, python3-sphinx-design dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [573 B] Get:5 copy:/<>/apt_archive ./ Packages [621 B] Fetched 2157 B in 0s (209 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: apt-utils bash-completion debconf-i18n krb5-locales libgpg-error-l10n libgpm2 libip4tc2 liblocale-gettext-perl libnss-nis libnss-nisplus libperl5.36 libtext-charwidth-perl libtext-iconv-perl libtext-wrapi18n-perl libunistring2 perl-modules-5.36 psmisc uuid-runtime Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev blt cython3 debhelper debugedit dh-autoreconf dh-python dh-strip-nondeterminism docutils-common dwz file fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-lyx gettext gettext-base groff-base intltool-debian libaec0 libarchive-zip-perl libblas3 libblosc1 libblosc2-2 libbrotli1 libbsd0 libcurl4 libdebhelper-perl libdeflate0 libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libdw1 libedit2 libelf1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfontconfig1 libfontenc1 libfreetype6 libfribidi0 libgfortran5 libgl1 libgl1-mesa-dri libglapi-mesa libglib2.0-0 libglvnd0 libglx-mesa0 libglx0 libgraphite2-3 libharfbuzz0b libhdf5-103-1 libhdf5-hl-100 libice6 libicu74 libimagequant0 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui libjs-sphinxdoc libjs-underscore libjson-perl liblapack3 liblbfgsb0 liblcms2-2 libldap2 liblerc4 libllvm17 liblzf1 liblzo2-2 libmagic-mgc libmagic1 libnghttp2-14 libopenjp2-7 libpciaccess0 libpipeline1 libpixman-1-0 libpsl5 libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.11 libpython3.11-dev libpython3.11-minimal libpython3.11-stdlib libpython3.12 libpython3.12-dev libpython3.12-minimal libpython3.12-stdlib libqhull-r8.0 libraqm0 librtmp1 libsasl2-2 libsasl2-modules-db libsensors-config libsensors5 libsharpyuv0 libsm6 libsnappy1v5 libssh-4 libsub-override-perl libsz2 libtcl8.6 libtiff6 libtk8.6 libtool libuchardet0 libunwind8 libvulkan1 libwebp7 libwebpdemux2 libwebpmux3 libx11-6 libx11-data libx11-xcb1 libxau6 libxaw7 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxdmcp6 libxext6 libxfixes3 libxfont2 libxft2 libxkbfile1 libxml2 libxmu6 libxmuu1 libxpm4 libxrandr2 libxrender1 libxshmfence1 libxslt1.1 libxss1 libxt6 libxxf86vm1 m4 man-db media-types meson netbase ninja-build po-debconf pybuild-plugin-pyproject python-babel-localedata python-is-python3 python-matplotlib-data python-tables-data python3 python3-alabaster python3-all python3-all-dev python3-appdirs python3-attr python3-babel python3-brotli python3-build python3-certifi python3-chardet python3-contourpy python3-cpuinfo python3-cycler python3-dateutil python3-decorator python3-deepdiff python3-dev python3-distutils python3-docutils python3-fonttools python3-fs python3-h5py python3-h5py-serial python3-idna python3-imageio python3-imagesize python3-iniconfig python3-installer python3-jinja2 python3-joblib python3-jsonpickle python3-kiwisolver python3-lazy-loader python3-lib2to3 python3-lxml python3-lz4 python3-markupsafe python3-matplotlib python3-mesonpy python3-minimal python3-mpmath python3-networkx python3-nibabel python3-numexpr python3-numpy python3-numpydoc python3-ordered-set python3-packaging python3-pandas python3-pandas-lib python3-pil python3-pil.imagetk python3-pkg-resources python3-pluggy python3-pygments python3-pyparsing python3-pyproject-hooks python3-pyproject-metadata python3-pytest python3-requests python3-roman python3-scipy python3-setuptools python3-setuptools-scm python3-six python3-skimage python3-skimage-lib python3-sklearn python3-sklearn-lib python3-snowballstemmer python3-sphinx python3-sphinx-design python3-sympy python3-tables python3-tables-lib python3-tabulate python3-threadpoolctl python3-tifffile python3-tk python3-toml python3-tqdm python3-trx-python python3-typing-extensions python3-tz python3-ufolib2 python3-urllib3 python3-wheel python3.11 python3.11-dev python3.11-minimal python3.12 python3.12-dev python3.12-minimal sgml-base sphinx-common tk8.6-blt2.5 unicode-data x11-common x11-xkb-utils xauth xkb-data xml-core xserver-common xvfb zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc blt-demo cython-doc dh-make flit gettext-doc libasprintf-dev libgettextpo-dev groff low-memory-monitor libjs-jquery-ui-docs liblcms2-utils pciutils lm-sensors tcl8.6 tk8.6 libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl python3-doc python3-venv python-attr-doc python3-pip python-build-doc python-cycler-doc docutils-doc fonts-linuxlibertine | ttf-linux-libertine texlive-lang-french texlive-latex-base texlive-latex-recommended python-h5py-doc python-imageio-doc python3-astropy python3-gdal ffmpeg python-installer-doc python-jinja2-doc python-jsonpickle-doc python3-simplejson python-lxml-doc cm-super-minimal dvipng fonts-staypuft ghostscript gir1.2-gtk-3.0 inkscape ipython3 librsvg2-common python3-cairocffi python3-gi python3-gi-cairo python3-gobject python3-pyqt5 python3-sip python3-tornado texlive-extra-utils texlive-latex-extra python-mpmath-doc python3-gmpy2 python-networkx-doc python3-pydot python3-pygraphviz python-nibabel-doc gfortran python-pandas-doc python3-statsmodels python-pil-doc python-pygments-doc ttf-bitstream-vera python-pyparsing-doc python3-cryptography python3-openssl python3-socks python-requests-doc python-scipy-doc python-setuptools-doc python-skimage-doc python3-dap python-sklearn-doc python3-stemmer fonts-freefont-otf imagemagick-6.q16 latexmk libjs-mathjax python3-sphinx-rtd-theme sphinx-doc tex-gyre texlive-fonts-recommended texlive-plain-generic texlive-fonts-extra python-sympy-doc python3-netcdf4 python-tables-doc vitables python3-fsspec tix python3-tk-dbg python3.11-venv python3.11-doc binfmt-support python3.12-venv python3.12-doc sgml-base-doc Recommended packages: curl | wget | lynx libarchive-cpio-perl libgl1-amber-dri libglib2.0-data shared-mime-info xdg-user-dirs javascript-common libjson-xs-perl libldap-common publicsuffix libsasl2-modules libltdl-dev mesa-vulkan-drivers | vulkan-icd libmail-sendmail-perl python3-clevercsv libpaper-utils python3-simplejson python3-psutil python3-bs4 python3-cssselect python3-html5lib patchelf python3-yaml python3-pydicom python3-fuse python3-bottleneck python3-odf python3-openpyxl python3-numba python3-olefile python3-dask python3-nose isympy-common python3-dipy xfonts-base The following NEW packages will be installed: autoconf automake autopoint autotools-dev blt cython3 debhelper debugedit dh-autoreconf dh-python dh-strip-nondeterminism docutils-common dwz file fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-lyx gettext gettext-base groff-base intltool-debian libaec0 libarchive-zip-perl libblas3 libblosc1 libblosc2-2 libbrotli1 libbsd0 libcurl4 libdebhelper-perl libdeflate0 libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libdw1 libedit2 libelf1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfontconfig1 libfontenc1 libfreetype6 libfribidi0 libgfortran5 libgl1 libgl1-mesa-dri libglapi-mesa libglib2.0-0 libglvnd0 libglx-mesa0 libglx0 libgraphite2-3 libharfbuzz0b libhdf5-103-1 libhdf5-hl-100 libice6 libicu74 libimagequant0 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui libjs-sphinxdoc libjs-underscore libjson-perl liblapack3 liblbfgsb0 liblcms2-2 libldap2 liblerc4 libllvm17 liblzf1 liblzo2-2 libmagic-mgc libmagic1 libnghttp2-14 libopenjp2-7 libpciaccess0 libpipeline1 libpixman-1-0 libpsl5 libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.11 libpython3.11-dev libpython3.11-minimal libpython3.11-stdlib libpython3.12 libpython3.12-dev libpython3.12-minimal libpython3.12-stdlib libqhull-r8.0 libraqm0 librtmp1 libsasl2-2 libsasl2-modules-db libsensors-config libsensors5 libsharpyuv0 libsm6 libsnappy1v5 libssh-4 libsub-override-perl libsz2 libtcl8.6 libtiff6 libtk8.6 libtool libuchardet0 libunwind8 libvulkan1 libwebp7 libwebpdemux2 libwebpmux3 libx11-6 libx11-data libx11-xcb1 libxau6 libxaw7 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxdmcp6 libxext6 libxfixes3 libxfont2 libxft2 libxkbfile1 libxml2 libxmu6 libxmuu1 libxpm4 libxrandr2 libxrender1 libxshmfence1 libxslt1.1 libxss1 libxt6 libxxf86vm1 m4 man-db media-types meson netbase ninja-build po-debconf pybuild-plugin-pyproject python-babel-localedata python-is-python3 python-matplotlib-data python-tables-data python3 python3-alabaster python3-all python3-all-dev python3-appdirs python3-attr python3-babel python3-brotli python3-build python3-certifi python3-chardet python3-contourpy python3-cpuinfo python3-cycler python3-dateutil python3-decorator python3-deepdiff python3-dev python3-distutils python3-docutils python3-fonttools python3-fs python3-h5py python3-h5py-serial python3-idna python3-imageio python3-imagesize python3-iniconfig python3-installer python3-jinja2 python3-joblib python3-jsonpickle python3-kiwisolver python3-lazy-loader python3-lib2to3 python3-lxml python3-lz4 python3-markupsafe python3-matplotlib python3-mesonpy python3-minimal python3-mpmath python3-networkx python3-nibabel python3-numexpr python3-numpy python3-numpydoc python3-ordered-set python3-packaging python3-pandas python3-pandas-lib python3-pil python3-pil.imagetk python3-pkg-resources python3-pluggy python3-pygments python3-pyparsing python3-pyproject-hooks python3-pyproject-metadata python3-pytest python3-requests python3-roman python3-scipy python3-setuptools python3-setuptools-scm python3-six python3-skimage python3-skimage-lib python3-sklearn python3-sklearn-lib python3-snowballstemmer python3-sphinx python3-sphinx-design python3-sympy python3-tables python3-tables-lib python3-tabulate python3-threadpoolctl python3-tifffile python3-tk python3-toml python3-tqdm python3-trx-python python3-typing-extensions python3-tz python3-ufolib2 python3-urllib3 python3-wheel python3.11 python3.11-dev python3.11-minimal python3.12 python3.12-dev python3.12-minimal sbuild-build-depends-main-dummy sgml-base sphinx-common tk8.6-blt2.5 unicode-data x11-common x11-xkb-utils xauth xkb-data xml-core xserver-common xvfb zlib1g-dev 0 upgraded, 271 newly installed, 0 to remove and 0 not upgraded. Need to get 232 MB of archives. After this operation, 989 MB of additional disk space will be used. 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http://ftpmaster.internal/ubuntu noble/main amd64 libtcl8.6 amd64 8.6.13+dfsg-2 [984 kB] Get:53 http://ftpmaster.internal/ubuntu noble/main amd64 libbrotli1 amd64 1.1.0-2 [332 kB] Get:54 http://ftpmaster.internal/ubuntu noble/main amd64 libfreetype6 amd64 2.13.2+dfsg-1 [397 kB] Get:55 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] Get:56 http://ftpmaster.internal/ubuntu noble/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] Get:57 http://ftpmaster.internal/ubuntu noble/main amd64 fontconfig-config amd64 2.14.2-6ubuntu1 [36.2 kB] Get:58 http://ftpmaster.internal/ubuntu noble/main amd64 libfontconfig1 amd64 2.14.2-6ubuntu1 [136 kB] Get:59 http://ftpmaster.internal/ubuntu noble/main amd64 libxrender1 amd64 1:0.9.10-1.1 [20.0 kB] Get:60 http://ftpmaster.internal/ubuntu noble/main amd64 libxft2 amd64 2.3.6-1 [44.5 kB] Get:61 http://ftpmaster.internal/ubuntu noble/main amd64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] Get:62 http://ftpmaster.internal/ubuntu noble/main amd64 libxss1 amd64 1:1.2.3-1build2 [8476 B] Get:63 http://ftpmaster.internal/ubuntu noble/main amd64 libtk8.6 amd64 8.6.13-2 [776 kB] Get:64 http://ftpmaster.internal/ubuntu noble/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-7 [630 kB] Get:65 http://ftpmaster.internal/ubuntu noble/main amd64 blt amd64 2.5.3+dfsg-7 [4826 B] Get:66 http://ftpmaster.internal/ubuntu noble/universe amd64 cython3 amd64 3.0.8-1ubuntu1 [6766 kB] Get:67 http://ftpmaster.internal/ubuntu noble/main amd64 libdebhelper-perl all 13.13ubuntu1 [88.9 kB] Get:68 http://ftpmaster.internal/ubuntu noble/main amd64 libtool all 2.4.7-7 [166 kB] Get:69 http://ftpmaster.internal/ubuntu noble/main amd64 dh-autoreconf all 20 [16.1 kB] Get:70 http://ftpmaster.internal/ubuntu noble/main amd64 libarchive-zip-perl all 1.68-1 [90.2 kB] Get:71 http://ftpmaster.internal/ubuntu noble/main amd64 libsub-override-perl all 0.10-1 [10.0 kB] Get:72 http://ftpmaster.internal/ubuntu noble/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [18.1 kB] Get:73 http://ftpmaster.internal/ubuntu noble/main amd64 dh-strip-nondeterminism all 1.13.1-1 [5362 B] Get:74 http://ftpmaster.internal/ubuntu noble/main amd64 libdw1 amd64 0.190-1 [260 kB] Get:75 http://ftpmaster.internal/ubuntu noble/main amd64 debugedit amd64 1:5.0-5 [46.1 kB] Get:76 http://ftpmaster.internal/ubuntu noble/main amd64 dwz amd64 0.15-1 [112 kB] Get:77 http://ftpmaster.internal/ubuntu noble/main amd64 gettext amd64 0.21-14ubuntu1 [864 kB] Get:78 http://ftpmaster.internal/ubuntu noble/main amd64 intltool-debian all 0.35.0+20060710.6 [23.2 kB] Get:79 http://ftpmaster.internal/ubuntu noble/main amd64 po-debconf all 1.0.21+nmu1 [233 kB] Get:80 http://ftpmaster.internal/ubuntu noble/main amd64 debhelper all 13.13ubuntu1 [868 kB] Get:81 http://ftpmaster.internal/ubuntu noble/main amd64 python3-lib2to3 all 3.11.5-1 [79.0 kB] Get:82 http://ftpmaster.internal/ubuntu noble/main amd64 python3-distutils all 3.11.5-1 [131 kB] Get:83 http://ftpmaster.internal/ubuntu noble/main amd64 python3-setuptools all 68.1.2-2 [396 kB] Get:84 http://ftpmaster.internal/ubuntu noble/universe amd64 dh-python all 6.20231223 [128 kB] Get:85 http://ftpmaster.internal/ubuntu noble/main amd64 xml-core all 0.19 [20.3 kB] Get:86 http://ftpmaster.internal/ubuntu noble/main amd64 docutils-common all 0.20.1+dfsg-3 [132 kB] Get:87 http://ftpmaster.internal/ubuntu noble/universe amd64 fonts-lyx all 2.4.0~RC1-2 [170 kB] Get:88 http://ftpmaster.internal/ubuntu noble/universe amd64 libaec0 amd64 1.1.2-1 [22.6 kB] Get:89 http://ftpmaster.internal/ubuntu noble/main amd64 libblas3 amd64 3.12.0-2 [238 kB] Get:90 http://ftpmaster.internal/ubuntu noble/main amd64 libsnappy1v5 amd64 1.1.10-1 [28.4 kB] Get:91 http://ftpmaster.internal/ubuntu noble/universe amd64 libblosc1 amd64 1.21.5+ds-1 [36.5 kB] Get:92 http://ftpmaster.internal/ubuntu noble/universe amd64 libblosc2-2 amd64 2.13.1+ds-1ubuntu1 [164 kB] Get:93 http://ftpmaster.internal/ubuntu noble/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-4 [20.1 kB] Get:94 http://ftpmaster.internal/ubuntu noble/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-4 [53.3 kB] Get:95 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libldap2 amd64 2.6.7+dfsg-1~exp1ubuntu1 [195 kB] Get:96 http://ftpmaster.internal/ubuntu noble/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2build4 [58.2 kB] Get:97 http://ftpmaster.internal/ubuntu noble/main amd64 libssh-4 amd64 0.10.6-2 [220 kB] Get:98 http://ftpmaster.internal/ubuntu noble/main amd64 libcurl4 amd64 8.5.0-2ubuntu2 [340 kB] Get:99 http://ftpmaster.internal/ubuntu noble/main amd64 libdeflate0 amd64 1.19-1 [43.7 kB] Get:100 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libdrm-amdgpu1 amd64 2.4.120-1 [20.2 kB] Get:101 http://ftpmaster.internal/ubuntu noble/main amd64 libpciaccess0 amd64 0.17-3 [18.9 kB] Get:102 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libdrm-intel1 amd64 2.4.120-1 [63.8 kB] Get:103 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libdrm-nouveau2 amd64 2.4.120-1 [17.6 kB] Get:104 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libdrm-radeon1 amd64 2.4.120-1 [20.7 kB] Get:105 http://ftpmaster.internal/ubuntu noble/main amd64 libexpat1-dev amd64 2.5.0-2 [137 kB] Get:106 http://ftpmaster.internal/ubuntu noble/main amd64 libfontenc1 amd64 1:1.1.4-1build3 [14.7 kB] Get:107 http://ftpmaster.internal/ubuntu noble/main amd64 libgfortran5 amd64 14-20240201-3ubuntu1 [930 kB] Get:108 http://ftpmaster.internal/ubuntu noble/main amd64 libvulkan1 amd64 1.3.275.0-1 [142 kB] Get:109 http://ftpmaster.internal/ubuntu noble/main amd64 libglapi-mesa amd64 23.3.3-1ubuntu2 [39.9 kB] Get:110 http://ftpmaster.internal/ubuntu noble/main amd64 libllvm17 amd64 1:17.0.6-5build1 [26.2 MB] Get:111 http://ftpmaster.internal/ubuntu noble/main amd64 libsensors-config all 1:3.6.0-8 [5294 B] Get:112 http://ftpmaster.internal/ubuntu noble/main amd64 libsensors5 amd64 1:3.6.0-8 [26.4 kB] Get:113 http://ftpmaster.internal/ubuntu noble/main amd64 libxcb-dri3-0 amd64 1.15-1 [7174 B] Get:114 http://ftpmaster.internal/ubuntu noble/main amd64 libgl1-mesa-dri amd64 23.3.3-1ubuntu2 [8786 kB] Get:115 http://ftpmaster.internal/ubuntu noble/main amd64 libx11-xcb1 amd64 2:1.8.7-1 [7798 B] Get:116 http://ftpmaster.internal/ubuntu noble/main amd64 libxcb-dri2-0 amd64 1.15-1 [7276 B] Get:117 http://ftpmaster.internal/ubuntu noble/main amd64 libxcb-glx0 amd64 1.15-1 [24.6 kB] Get:118 http://ftpmaster.internal/ubuntu noble/main amd64 libxcb-present0 amd64 1.15-1 [5708 B] Get:119 http://ftpmaster.internal/ubuntu noble/main amd64 libxcb-randr0 amd64 1.15-1 [18.1 kB] Get:120 http://ftpmaster.internal/ubuntu noble/main amd64 libxcb-shm0 amd64 1.15-1 [5740 B] Get:121 http://ftpmaster.internal/ubuntu noble/main amd64 libxcb-sync1 amd64 1.15-1 [9358 B] Get:122 http://ftpmaster.internal/ubuntu noble/main amd64 libxcb-xfixes0 amd64 1.15-1 [10.2 kB] Get:123 http://ftpmaster.internal/ubuntu noble/main amd64 libxfixes3 amd64 1:6.0.0-2 [10.9 kB] Get:124 http://ftpmaster.internal/ubuntu noble/main amd64 libxshmfence1 amd64 1.3-1build4 [5394 B] Get:125 http://ftpmaster.internal/ubuntu noble/main amd64 libxxf86vm1 amd64 1:1.1.4-1build3 [10.4 kB] Get:126 http://ftpmaster.internal/ubuntu noble/main amd64 libglx-mesa0 amd64 23.3.3-1ubuntu2 [154 kB] Get:127 http://ftpmaster.internal/ubuntu noble/main amd64 libgraphite2-3 amd64 1.3.14-2 [83.1 kB] Get:128 http://ftpmaster.internal/ubuntu noble/main amd64 libharfbuzz0b amd64 8.3.0-2 [469 kB] Get:129 http://ftpmaster.internal/ubuntu noble/universe amd64 libsz2 amd64 1.1.2-1 [5416 B] Get:130 http://ftpmaster.internal/ubuntu noble/universe amd64 libhdf5-103-1 amd64 1.10.10+repack-3ubuntu1 [1327 kB] Get:131 http://ftpmaster.internal/ubuntu noble/universe amd64 libhdf5-hl-100 amd64 1.10.10+repack-3ubuntu1 [56.2 kB] Get:132 http://ftpmaster.internal/ubuntu noble/main amd64 libice6 amd64 2:1.0.10-1build2 [42.6 kB] Get:133 http://ftpmaster.internal/ubuntu noble/main amd64 libimagequant0 amd64 2.18.0-1 [36.3 kB] Get:134 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg-turbo8 amd64 2.1.5-2ubuntu1 [147 kB] Get:135 http://ftpmaster.internal/ubuntu noble/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] Get:136 http://ftpmaster.internal/ubuntu noble/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] Get:137 http://ftpmaster.internal/ubuntu noble/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] Get:138 http://ftpmaster.internal/ubuntu noble/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] Get:139 http://ftpmaster.internal/ubuntu noble/main amd64 libjs-sphinxdoc all 7.2.6-3 [149 kB] Get:140 http://ftpmaster.internal/ubuntu noble/main amd64 libjson-perl all 4.10000-1 [81.9 kB] Get:141 http://ftpmaster.internal/ubuntu noble/main amd64 liblapack3 amd64 3.12.0-2 [2646 kB] Get:142 http://ftpmaster.internal/ubuntu noble/universe amd64 liblbfgsb0 amd64 3.0+dfsg.4-1 [30.4 kB] Get:143 http://ftpmaster.internal/ubuntu noble/main amd64 liblcms2-2 amd64 2.14-2 [161 kB] Get:144 http://ftpmaster.internal/ubuntu noble/main amd64 liblerc4 amd64 4.0.0+ds-4ubuntu1 [184 kB] Get:145 http://ftpmaster.internal/ubuntu noble/universe amd64 liblzf1 amd64 3.6-4 [7624 B] Get:146 http://ftpmaster.internal/ubuntu noble/main amd64 liblzo2-2 amd64 2.10-2build3 [53.7 kB] Get:147 http://ftpmaster.internal/ubuntu noble/main amd64 libpixman-1-0 amd64 0.42.2-1 [268 kB] Get:148 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libpython3.12 amd64 3.12.2-1 [2359 kB] Get:149 http://ftpmaster.internal/ubuntu noble/main amd64 zlib1g-dev amd64 1:1.3.dfsg-3ubuntu1 [896 kB] Get:150 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libpython3.12-dev amd64 3.12.2-1 [5533 kB] Get:151 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libpython3-dev amd64 3.12.1-0ubuntu1 [9920 B] Get:152 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libpython3.11 amd64 3.11.8-1 [2212 kB] Get:153 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libpython3.11-dev amd64 3.11.8-1 [5164 kB] Get:154 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 libpython3-all-dev amd64 3.12.1-0ubuntu1 [914 B] Get:155 http://ftpmaster.internal/ubuntu noble/universe amd64 libqhull-r8.0 amd64 2020.2-6 [194 kB] Get:156 http://ftpmaster.internal/ubuntu noble/main amd64 libraqm0 amd64 0.10.1-1 [14.6 kB] Get:157 http://ftpmaster.internal/ubuntu noble/main amd64 libsharpyuv0 amd64 1.3.2-0.3 [15.5 kB] Get:158 http://ftpmaster.internal/ubuntu noble/main amd64 libsm6 amd64 2:1.2.3-1build2 [16.7 kB] Get:159 http://ftpmaster.internal/ubuntu noble/main amd64 libjbig0 amd64 2.1-6.1ubuntu1 [29.3 kB] Get:160 http://ftpmaster.internal/ubuntu noble/main amd64 libwebp7 amd64 1.3.2-0.3 [230 kB] Get:161 http://ftpmaster.internal/ubuntu noble/main amd64 libtiff6 amd64 4.5.1+git230720-3ubuntu1 [232 kB] Get:162 http://ftpmaster.internal/ubuntu noble/main amd64 libunwind8 amd64 1.6.2-3 [55.7 kB] Get:163 http://ftpmaster.internal/ubuntu noble/main amd64 libwebpdemux2 amd64 1.3.2-0.3 [12.4 kB] Get:164 http://ftpmaster.internal/ubuntu noble/main amd64 libwebpmux3 amd64 1.3.2-0.3 [25.5 kB] Get:165 http://ftpmaster.internal/ubuntu noble/main amd64 libxt6 amd64 1:1.2.1-1.1 [173 kB] Get:166 http://ftpmaster.internal/ubuntu noble/main amd64 libxmu6 amd64 2:1.1.3-3 [49.6 kB] Get:167 http://ftpmaster.internal/ubuntu noble/main amd64 libxpm4 amd64 1:3.5.17-1 [35.9 kB] Get:168 http://ftpmaster.internal/ubuntu noble/main amd64 libxaw7 amd64 2:1.0.14-1 [191 kB] Get:169 http://ftpmaster.internal/ubuntu noble/main amd64 libxfont2 amd64 1:2.0.6-1 [92.7 kB] Get:170 http://ftpmaster.internal/ubuntu noble/main amd64 libxkbfile1 amd64 1:1.1.0-1build3 [71.8 kB] Get:171 http://ftpmaster.internal/ubuntu noble/main amd64 libxrandr2 amd64 2:1.5.2-2 [20.4 kB] Get:172 http://ftpmaster.internal/ubuntu noble/main amd64 libxslt1.1 amd64 1.1.35-1 [164 kB] Get:173 http://ftpmaster.internal/ubuntu noble/universe amd64 ninja-build amd64 1.11.1-2 [129 kB] Get:174 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 meson all 1.3.1-1 [808 kB] Get:175 http://ftpmaster.internal/ubuntu noble/main amd64 python3-packaging all 23.2-1 [40.6 kB] Get:176 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-pyproject-hooks all 1.0.0-2 [9434 B] Get:177 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-toml all 0.10.2-1 [16.5 kB] Get:178 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-wheel all 0.42.0-1 [53.1 kB] Get:179 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-build all 1.0.3-2 [27.3 kB] Get:180 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-installer all 0.7.0+dfsg1-2 [18.1 kB] Get:181 http://ftpmaster.internal/ubuntu noble/universe amd64 pybuild-plugin-pyproject all 6.20231223 [1762 B] Get:182 http://ftpmaster.internal/ubuntu noble/main amd64 python-babel-localedata all 2.10.3-3build1 [6357 kB] Get:183 http://ftpmaster.internal/ubuntu noble/main amd64 python-is-python3 all 3.11.4-1 [2684 B] Get:184 http://ftpmaster.internal/ubuntu noble/universe amd64 python-matplotlib-data all 3.6.3-1ubuntu3 [2936 kB] Get:185 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 python-tables-data all 3.9.2-1 [56.7 kB] Get:186 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 python3-all amd64 3.12.1-0ubuntu1 [910 B] Get:187 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 python3.12-dev amd64 3.12.2-1 [505 kB] Get:188 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 python3-dev amd64 3.12.1-0ubuntu1 [26.7 kB] Get:189 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 python3.11-dev amd64 3.11.8-1 [508 kB] Get:190 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 python3-all-dev amd64 3.12.1-0ubuntu1 [914 B] Get:191 http://ftpmaster.internal/ubuntu noble/main amd64 python3-appdirs all 1.4.4-4 [10.9 kB] Get:192 http://ftpmaster.internal/ubuntu noble/main amd64 python3-attr all 23.2.0-1 [57.2 kB] Get:193 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 python3-tz all 2023.4-1 [31.3 kB] Get:194 http://ftpmaster.internal/ubuntu noble/main amd64 python3-babel all 2.10.3-3build1 [87.5 kB] Get:195 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-brotli amd64 1.1.0-2 [340 kB] Get:196 http://ftpmaster.internal/ubuntu noble/main amd64 python3-certifi all 2023.11.17-1 [165 kB] Get:197 http://ftpmaster.internal/ubuntu noble/main amd64 python3-chardet all 5.2.0+dfsg-1 [117 kB] Get:198 http://ftpmaster.internal/ubuntu noble/main amd64 python3-numpy amd64 1:1.24.2-2 [7141 kB] Get:199 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-contourpy amd64 1.0.7-1build2 [283 kB] Get:200 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-cpuinfo all 9.0.0-1 [21.2 kB] Get:201 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-cycler all 0.11.0-1 [8156 B] Get:202 http://ftpmaster.internal/ubuntu noble/main amd64 python3-six all 1.16.0-4 [12.4 kB] Get:203 http://ftpmaster.internal/ubuntu noble/main amd64 python3-dateutil all 2.8.2-3 [79.2 kB] Get:204 http://ftpmaster.internal/ubuntu noble/main amd64 python3-decorator all 5.1.1-5 [10.1 kB] Get:205 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-jsonpickle all 3.0.2+dfsg-1 [35.3 kB] Get:206 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-ordered-set all 4.1.0-1 [9778 B] Get:207 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-deepdiff all 6.7.1-1 [62.8 kB] Get:208 http://ftpmaster.internal/ubuntu noble/main amd64 python3-roman all 3.3-3 [9632 B] Get:209 http://ftpmaster.internal/ubuntu noble/main amd64 python3-docutils all 0.20.1+dfsg-3 [393 kB] Get:210 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-scipy amd64 1.10.1-10build1 [19.4 MB] Get:211 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 python3-typing-extensions all 4.9.0-1 [58.7 kB] Get:212 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-ufolib2 all 0.16.0+dfsg1-1 [33.5 kB] Get:213 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-mpmath all 1.2.1-2 [419 kB] Get:214 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-sympy all 1.12-7 [3966 kB] Get:215 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-fs all 2.4.16-3 [91.1 kB] Get:216 http://ftpmaster.internal/ubuntu noble/main amd64 python3-lxml amd64 5.1.0-1 [2179 kB] Get:217 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-lz4 amd64 4.0.2+dfsg-1build2 [27.0 kB] Get:218 http://ftpmaster.internal/ubuntu noble/universe amd64 unicode-data all 15.1.0-1 [8878 kB] Get:219 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-fonttools amd64 4.46.0-1 [1693 kB] Get:220 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 python3-h5py-serial amd64 3.10.0-1ubuntu1 [1510 kB] Get:221 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 python3-h5py all 3.10.0-1ubuntu1 [7970 B] Get:222 http://ftpmaster.internal/ubuntu noble/main amd64 python3-idna all 3.3-2 [45.4 kB] Get:223 http://ftpmaster.internal/ubuntu noble/main amd64 python3-tk amd64 3.11.5-1 [112 kB] Get:224 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-pil.imagetk amd64 10.2.0-1 [9584 B] Get:225 http://ftpmaster.internal/ubuntu noble/main amd64 libopenjp2-7 amd64 2.5.0-2 [174 kB] Get:226 http://ftpmaster.internal/ubuntu noble/main amd64 python3-pil amd64 10.2.0-1 [487 kB] Get:227 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-imageio all 2.33.1-1 [233 kB] Get:228 http://ftpmaster.internal/ubuntu noble/main amd64 python3-imagesize all 1.4.1-1 [6844 B] Get:229 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-iniconfig all 1.1.1-2 [6024 B] Get:230 http://ftpmaster.internal/ubuntu noble-proposed/main amd64 python3-markupsafe amd64 2.1.4-1 [13.5 kB] Get:231 http://ftpmaster.internal/ubuntu noble/main amd64 python3-jinja2 all 3.1.2-1ubuntu1 [107 kB] Get:232 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-joblib all 1.3.2-1 [207 kB] Get:233 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-kiwisolver amd64 1.4.4-1build2 [69.4 kB] Get:234 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-lazy-loader all 0.3-1 [9530 B] Get:235 http://ftpmaster.internal/ubuntu noble/main amd64 python3-pyparsing all 3.1.1-1 [86.2 kB] Get:236 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-matplotlib amd64 3.6.3-1ubuntu3 [7486 kB] Get:237 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-pyproject-metadata all 0.7.1-1 [8466 B] Get:238 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-mesonpy all 0.15.0-1 [89.7 kB] Get:239 http://ftpmaster.internal/ubuntu noble/main amd64 python3-networkx all 2.8.8-1ubuntu1 [1468 kB] Get:240 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-numexpr amd64 2.9.0-1 [92.8 kB] Get:241 http://ftpmaster.internal/ubuntu noble/main amd64 sphinx-common all 7.2.6-3 [741 kB] Get:242 http://ftpmaster.internal/ubuntu noble/main amd64 python3-alabaster all 0.7.12-1 [17.8 kB] Get:243 http://ftpmaster.internal/ubuntu noble/main amd64 python3-urllib3 all 2.0.7-1 [113 kB] Get:244 http://ftpmaster.internal/ubuntu noble/main amd64 python3-requests all 2.31.0+dfsg-1ubuntu1 [50.7 kB] Get:245 http://ftpmaster.internal/ubuntu noble/main amd64 python3-snowballstemmer all 2.2.0-4 [59.7 kB] Get:246 http://ftpmaster.internal/ubuntu noble/main amd64 python3-sphinx all 7.2.6-3 [557 kB] Get:247 http://ftpmaster.internal/ubuntu noble/main amd64 python3-tabulate all 0.8.10-1 [38.2 kB] Get:248 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 python3-numpydoc all 1.6.0-1 [50.4 kB] Get:249 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 python3-pandas-lib amd64 2.1.4+dfsg-4ubuntu1 [8348 kB] Get:250 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 python3-pandas all 2.1.4+dfsg-4ubuntu1 [3042 kB] Get:251 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 python3-pluggy all 1.4.0-1 [20.4 kB] Get:252 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 python3-pytest all 7.4.4-2 [241 kB] Get:253 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-setuptools-scm all 8.0.4-2 [35.8 kB] Get:254 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-skimage-lib amd64 0.22.0-3 [4284 kB] Get:255 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-tifffile all 20240130-1 [174 kB] Get:256 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-skimage all 0.22.0-3 [21.5 MB] Get:257 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-threadpoolctl all 3.1.0-1 [21.3 kB] Get:258 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-sklearn-lib amd64 1.2.1+dfsg-1build2 [5146 kB] Get:259 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-sklearn all 1.2.1+dfsg-1build2 [2118 kB] Get:260 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-sphinx-design all 0.5.0-2 [866 kB] Get:261 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 python3-tables-lib amd64 3.9.2-1 [1136 kB] Get:262 http://ftpmaster.internal/ubuntu noble-proposed/universe amd64 python3-tables all 3.9.2-1 [467 kB] Get:263 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-tqdm all 4.64.1-2 [95.2 kB] Get:264 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-nibabel all 5.2.0-2 [2704 kB] Get:265 http://ftpmaster.internal/ubuntu noble/universe amd64 python3-trx-python all 0.2.9-1 [47.8 kB] Get:266 http://ftpmaster.internal/ubuntu noble/main amd64 x11-xkb-utils amd64 7.7+8 [169 kB] Get:267 http://ftpmaster.internal/ubuntu noble/main amd64 xserver-common all 2:21.1.11-2ubuntu1 [32.6 kB] Get:268 http://ftpmaster.internal/ubuntu noble/main amd64 libglvnd0 amd64 1.7.0-1 [69.5 kB] Get:269 http://ftpmaster.internal/ubuntu noble/main amd64 libglx0 amd64 1.7.0-1 [38.7 kB] Get:270 http://ftpmaster.internal/ubuntu noble/main amd64 libgl1 amd64 1.7.0-1 [103 kB] Get:271 http://ftpmaster.internal/ubuntu noble/universe amd64 xvfb amd64 2:21.1.11-2ubuntu1 [873 kB] Preconfiguring packages ... 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Setting up libsnappy1v5:amd64 (1.1.10-1) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-4) ... Setting up unicode-data (15.1.0-1) ... Setting up libfontenc1:amd64 (1:1.1.4-1build3) ... Setting up autotools-dev (20220109.1) ... Setting up libblas3:amd64 (3.12.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libexpat1-dev:amd64 (2.5.0-2) ... Setting up libfreetype6:amd64 (2.13.2+dfsg-1) ... Setting up libx11-data (2:1.8.7-1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2build4) ... Setting up liblzf1:amd64 (3.6-4) ... Setting up libfribidi0:amd64 (1.0.13-3) ... Setting up libimagequant0:amd64 (2.18.0-1) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libtcl8.6:amd64 (8.6.13+dfsg-2) ... Setting up autopoint (0.21-14ubuntu1) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up libsensors5:amd64 (1:3.6.0-8) ... 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Setting up python-matplotlib-data (3.6.3-1ubuntu3) ... Setting up libwebpmux3:amd64 (1.3.2-0.3) ... Setting up libbsd0:amd64 (0.11.8-1) ... Setting up libdrm-common (2.4.120-1) ... Setting up libelf1:amd64 (0.190-1) ... Setting up libxfont2:amd64 (1:2.0.6-1) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.3build3) ... Setting up python-tables-data (3.9.2-1) ... Setting up libldap2:amd64 (2.6.7+dfsg-1~exp1ubuntu1) ... Setting up libsz2:amd64 (1.1.2-1) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up libjpeg8:amd64 (8c-2ubuntu11) ... Setting up automake (1:1.16.5-1.3ubuntu1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up python3.11-minimal (3.11.8-1) ... Setting up libice6:amd64 (2:1.0.10-1build2) ... Setting up libdw1:amd64 (0.190-1) ... Setting up libxdmcp6:amd64 (1:1.1.3-0ubuntu5) ... Setting up liblapack3:amd64 (3.12.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libxcb1:amd64 (1.15-1) ... Setting up gettext (0.21-14ubuntu1) ... Setting up libxcb-xfixes0:amd64 (1.15-1) ... Setting up libpython3.12-stdlib:amd64 (3.12.2-1) ... Setting up libtool (2.4.7-7) ... Setting up fontconfig-config (2.14.2-6ubuntu1) ... Setting up libxcb-glx0:amd64 (1.15-1) ... Setting up libwebpdemux2:amd64 (1.3.2-0.3) ... Setting up libpython3.11-stdlib:amd64 (3.11.8-1) ... Setting up python3.12 (3.12.2-1) ... Setting up libedit2:amd64 (3.1-20230828-1) ... Setting up libxcb-shm0:amd64 (1.15-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libxcb-present0:amd64 (1.15-1) ... Setting up dh-autoreconf (20) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libxcb-sync1:amd64 (1.15-1) ... 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Setting up libdrm-amdgpu1:amd64 (2.4.120-1) ... Setting up libxcb-dri3-0:amd64 (1.15-1) ... Setting up libx11-xcb1:amd64 (2:1.8.7-1) ... Setting up python3.11 (3.11.8-1) ... Setting up libdrm-nouveau2:amd64 (2.4.120-1) ... Setting up libpython3.11:amd64 (3.11.8-1) ... Setting up libxpm4:amd64 (1:3.5.17-1) ... Setting up libxrender1:amd64 (1:0.9.10-1.1) ... Setting up libdrm-radeon1:amd64 (2.4.120-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libdrm-intel1:amd64 (2.4.120-1) ... Setting up libgl1-mesa-dri:amd64 (23.3.3-1ubuntu2) ... Setting up libxext6:amd64 (2:1.3.4-1build1) ... Setting up python3 (3.12.1-0ubuntu1) ... Setting up libpython3.12-dev:amd64 (3.12.2-1) ... Setting up man-db (2.12.0-3) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /usr/lib/systemd/system/man-db.timer. Setting up python3-markupsafe (2.1.4-1) ... Setting up python3-tz (2023.4-1) ... 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Setting up python3-sympy (1.12-7) ... Setting up python3-attr (23.2.0-1) ... Setting up libxft2:amd64 (2.3.6-1) ... Setting up libxmu6:amd64 (2:1.1.3-3) ... Setting up python3-jsonpickle (3.0.2+dfsg-1) ... Setting up libglx-mesa0:amd64 (23.3.3-1ubuntu2) ... Setting up libpython3-dev:amd64 (3.12.1-0ubuntu1) ... Setting up python3-setuptools (68.1.2-2) ... Setting up libglx0:amd64 (1.7.0-1) ... Setting up python3-joblib (1.3.2-1) ... Setting up python3-pyproject-metadata (0.7.1-1) ... Setting up python3-babel (2.10.3-3build1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-lz4 (4.0.2+dfsg-1build2) ... Setting up python3.11-dev (3.11.8-1) ... Setting up python3-pytest (7.4.4-2) ... Setting up python3-alabaster (0.7.12-1) ... Setting up libtk8.6:amd64 (8.6.13-2) ... Setting up python3-tqdm (4.64.1-2) ... Setting up python3-threadpoolctl (3.1.0-1) ... Setting up python3-tabulate (0.8.10-1) ... Setting up meson (1.3.1-1) ... Setting up python3-all (3.12.1-0ubuntu1) ... Setting up python3-ordered-set (4.1.0-1) ... Setting up debhelper (13.13ubuntu1) ... Setting up libxaw7:amd64 (2:1.0.14-1) ... Setting up python3-networkx (2.8.8-1ubuntu1) ... /usr/lib/python3/dist-packages/networkx/readwrite/tests/test_gml.py:556: SyntaxWarning: invalid octal escape sequence '\420' "graph [edge [ source u'u\4200' target u'u\4200' ] " /usr/lib/python3/dist-packages/networkx/readwrite/tests/test_gml.py:557: SyntaxWarning: invalid octal escape sequence '\420' + "node [ id u'u\4200' label b ] ]" Setting up python3-wheel (0.42.0-1) ... Setting up python3-setuptools-scm (8.0.4-2) ... Setting up python3-fs (2.4.16-3) ... Setting up python3-pygments (2.17.2+dfsg-1) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up libgl1:amd64 (1.7.0-1) ... Setting up libpython3-all-dev:amd64 (3.12.1-0ubuntu1) ... Setting up python3-dev (3.12.1-0ubuntu1) ... 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Setting up python3-sphinx-design (0.5.0-2) ... Setting up python3-numpydoc (1.6.0-1) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.4.0-171-generic #189-Ubuntu SMP Fri Jan 5 14:23:02 UTC 2024 amd64 (x86_64) Toolchain package versions: binutils_2.42-2ubuntu1 dpkg-dev_1.22.4ubuntu2 g++-13_13.2.0-13ubuntu1 gcc-13_13.2.0-13ubuntu1 libc6-dev_2.39-0ubuntu1 libstdc++-13-dev_13.2.0-13ubuntu1 libstdc++6_14-20240201-3ubuntu1 linux-libc-dev_6.8.0-7.7 Package versions: adduser_3.137ubuntu1 advancecomp_2.5-1 apt_2.7.10 apt-utils_2.7.10 autoconf_2.71-3 automake_1:1.16.5-1.3ubuntu1 autopoint_0.21-14ubuntu1 autotools-dev_20220109.1 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python3-contourpy_1.0.7-1build2 python3-cpuinfo_9.0.0-1 python3-cycler_0.11.0-1 python3-dateutil_2.8.2-3 python3-decorator_5.1.1-5 python3-deepdiff_6.7.1-1 python3-dev_3.12.1-0ubuntu1 python3-distutils_3.11.5-1 python3-docutils_0.20.1+dfsg-3 python3-fonttools_4.46.0-1 python3-fs_2.4.16-3 python3-h5py_3.10.0-1ubuntu1 python3-h5py-serial_3.10.0-1ubuntu1 python3-idna_3.3-2 python3-imageio_2.33.1-1 python3-imagesize_1.4.1-1 python3-iniconfig_1.1.1-2 python3-installer_0.7.0+dfsg1-2 python3-jinja2_3.1.2-1ubuntu1 python3-joblib_1.3.2-1 python3-jsonpickle_3.0.2+dfsg-1 python3-kiwisolver_1.4.4-1build2 python3-lazy-loader_0.3-1 python3-lib2to3_3.11.5-1 python3-lxml_5.1.0-1 python3-lz4_4.0.2+dfsg-1build2 python3-markupsafe_2.1.4-1 python3-matplotlib_3.6.3-1ubuntu3 python3-mesonpy_0.15.0-1 python3-minimal_3.12.1-0ubuntu1 python3-mpmath_1.2.1-2 python3-networkx_2.8.8-1ubuntu1 python3-nibabel_5.2.0-2 python3-numexpr_2.9.0-1 python3-numpy_1:1.24.2-2 python3-numpydoc_1.6.0-1 python3-ordered-set_4.1.0-1 python3-packaging_23.2-1 python3-pandas_2.1.4+dfsg-4ubuntu1 python3-pandas-lib_2.1.4+dfsg-4ubuntu1 python3-pil_10.2.0-1 python3-pil.imagetk_10.2.0-1 python3-pkg-resources_68.1.2-2 python3-pluggy_1.4.0-1 python3-pygments_2.17.2+dfsg-1 python3-pyparsing_3.1.1-1 python3-pyproject-hooks_1.0.0-2 python3-pyproject-metadata_0.7.1-1 python3-pytest_7.4.4-2 python3-requests_2.31.0+dfsg-1ubuntu1 python3-roman_3.3-3 python3-scipy_1.10.1-10build1 python3-setuptools_68.1.2-2 python3-setuptools-scm_8.0.4-2 python3-six_1.16.0-4 python3-skimage_0.22.0-3 python3-skimage-lib_0.22.0-3 python3-sklearn_1.2.1+dfsg-1build2 python3-sklearn-lib_1.2.1+dfsg-1build2 python3-snowballstemmer_2.2.0-4 python3-sphinx_7.2.6-3 python3-sphinx-design_0.5.0-2 python3-sympy_1.12-7 python3-tables_3.9.2-1 python3-tables-lib_3.9.2-1 python3-tabulate_0.8.10-1 python3-threadpoolctl_3.1.0-1 python3-tifffile_20240130-1 python3-tk_3.11.5-1 python3-toml_0.10.2-1 python3-tqdm_4.64.1-2 python3-trx-python_0.2.9-1 python3-typing-extensions_4.9.0-1 python3-tz_2023.4-1 python3-ufolib2_0.16.0+dfsg1-1 python3-urllib3_2.0.7-1 python3-wheel_0.42.0-1 python3.11_3.11.8-1 python3.11-dev_3.11.8-1 python3.11-minimal_3.11.8-1 python3.12_3.12.2-1 python3.12-dev_3.12.2-1 python3.12-minimal_3.12.2-1 readline-common_8.2-3 rpcsvc-proto_1.4.2-0ubuntu6 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.20 sgml-base_1.31 sphinx-common_7.2.6-3 systemd_255.2-3ubuntu2 systemd-dev_255.2-3ubuntu2 systemd-sysv_255.2-3ubuntu2 sysvinit-utils_3.08-3ubuntu1 tar_1.35+dfsg-3 tk8.6-blt2.5_2.5.3+dfsg-7 tzdata_2024a-1ubuntu1 ubuntu-keyring_2023.11.28.1 unicode-data_15.1.0-1 usrmerge_35ubuntu1 util-linux_2.39.2-6ubuntu1 uuid-runtime_2.39.2-6ubuntu1 x11-common_1:7.7+23ubuntu2 x11-xkb-utils_7.7+8 xauth_1:1.1.2-1 xkb-data_2.38-2 xml-core_0.19 xserver-common_2:21.1.11-2ubuntu1 xvfb_2:21.1.11-2ubuntu1 xz-utils_5.4.5-0.3 zlib1g_1:1.3.dfsg-3ubuntu1 zlib1g-dev_1:1.3.dfsg-3ubuntu1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: dipy Binary: python3-dipy, python3-dipy-lib, python-dipy-doc Architecture: any all Version: 1.8.0-2ubuntu1 Maintainer: Ubuntu Developers Uploaders: Yaroslav Halchenko , Michael Hanke , Étienne Mollier Homepage: https://dipy.org Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/dipy Vcs-Git: https://salsa.debian.org/med-team/dipy.git Testsuite: autopkgtest, autopkgtest-pkg-python Testsuite-Triggers: python3-all, python3-matplotlib, python3-nibabel, python3-pytest, python3-sklearn, python3-tables, python3-vtk9, xauth, xvfb Build-Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, libgomp1, cython3, python-is-python3, python3-all-dev, python3-setuptools, python3-mesonpy, python3-numpy, python3-scipy, python3-h5py , python3-matplotlib , python3-nibabel , python3-pil.imagetk , python3-pytest , python3-pandas , python3-tables , python3-tk , python3-trx-python , python3-sklearn , python3-tqdm , xvfb , xauth Build-Depends-Indep: python3-sphinx , python3-numpydoc , python3-skimage , python3-sphinx-design Package-List: python-dipy-doc deb doc optional arch=all python3-dipy deb python optional arch=all python3-dipy-lib deb python optional arch=any Checksums-Sha1: 351ad9bb2114742d4a2055a7611fa90eb933eb38 6494323 dipy_1.8.0.orig.tar.gz 1278f7b4966c9f444d9d16f2398d282fcab17613 18712 dipy_1.8.0-2ubuntu1.debian.tar.xz Checksums-Sha256: 06648d858d1c5f5e69859e4298aed837eee123a61d60c2411b7f76724e54f241 6494323 dipy_1.8.0.orig.tar.gz be039508ee80c1fd9492abda98fd9f1eb2ed0e574ce950e31e2fef7dafb83b05 18712 dipy_1.8.0-2ubuntu1.debian.tar.xz Files: 089beabbc3d661a57b6db304d0e8874b 6494323 dipy_1.8.0.orig.tar.gz fa75ef6fc2962b34230bbc947a6867e2 18712 dipy_1.8.0-2ubuntu1.debian.tar.xz Original-Maintainer: Debian Med Packaging Team -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEJeP/LX9Gnb59DU5Qr8/sjmac4cIFAmXKfdkACgkQr8/sjmac 4cIm5Q/+K1T8PXu56TPoehsA5w8n9TvNHRXmsDVAnGeGuKMvGSokdTZRuLwILKtB 79TBTeF4M5U7htMJ3PEpRghx6ZBhFVigWaZyAb0VER5+/EZjdJ1j/9/U2piqESqx n4exl8ddyxBP3wmteRtNYmYr/TR4hcbQvSEz/yu80zGC6ZtF+yZmZ3EEeWenyXsm Jj+eOGkpou6dvPUsPuCo1TIFhRrSDrF1QnkYoPFTcynjluLAyzTXvwfsLGa4wt9h uvyJrF87qCyFjdkm3QrgWluwXD6bBiOS8Uics2724fpnr8Fi5JicoUhmpmktrIQU uTZxA3fI4rYpiiC5aWpQQd610aupG1x60zLEVqQnUn696X2GaZSwl+jRLL5rByCD xRFo4b5rKtI482QkDzf38l1mW4iiEF/KI+xt35TJbRld7xFozkuPl859k5Lq6eeA p8yHFlQkKIshg81MBnybkwHOyvAiMWiVHcj/llXxQG+kYuT81TnX7nDuKZA9Q9r8 BNgC5YkPwKgavAVacZVg5w2gDY3e0Ds5RMHS8Jqn1FqKBGCEN/RspxtPvAc8ExXc 0zNCK06AfWayU8QGv/Mq/z08RDwt88+1rrLc+GTaKa2N1e8NUBY4RIfzJPl0W/Ea WSx6gWoj1xbiZRSA1+Go402cEhRIXr2k1FIUbsZS7xqH8Al0V3Y= =RmYY -----END PGP SIGNATURE----- gpgv: Signature made Mon Feb 12 20:21:45 2024 UTC gpgv: using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./dipy_1.8.0-2ubuntu1.dsc: no acceptable signature found dpkg-source: info: extracting dipy in /<> dpkg-source: info: unpacking dipy_1.8.0.orig.tar.gz dpkg-source: info: unpacking dipy_1.8.0-2ubuntu1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying deb_no_sources_for_docs dpkg-source: info: applying skip-tests-needing-internet.patch dpkg-source: info: applying fix-i386.patch dpkg-source: info: applying skip_wall-clock_test.patch dpkg-source: info: applying no-network.patch dpkg-source: info: applying skip-stringent-test.patch dpkg-source: info: applying skip-streamwarp-test-in-big-endian.patch dpkg-source: info: applying relay_comparison.patch dpkg-source: info: applying sphinx-default.patch dpkg-source: info: applying fix-privacy-breaches.patch dpkg-source: info: applying fix-endianness.patch dpkg-source: info: applying clear-cython.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-27766904 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-27766904 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-27766904 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- Command: dpkg-buildpackage -us -uc -mLaunchpad Build Daemon -b -rfakeroot dpkg-buildpackage: info: source package dipy dpkg-buildpackage: info: source version 1.8.0-2ubuntu1 dpkg-buildpackage: info: source distribution noble dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 dpkg-source: info: using options from dipy-1.8.0/debian/source/options: --extend-diff-ignore=(^|/)dipy/COMMIT_INFO.txt$ debian/rules clean dh clean --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean || true rm -rf .pybuild __pycache__ find dipy -name "*\.c" -delete make[1]: Leaving directory '/<>' dh_autoreconf_clean -O--buildsystem=pybuild debian/rules execute_before_dh_clean make[1]: Entering directory '/<>' rm -rf build doc-stamp /usr/bin/make -C doc clean make[2]: Entering directory '/<>/doc' rm -rf reference/*.rst rm -rf reference_cmd/*.rst rm -rf examples_revamped cd examples_built && find . -not -name "README" -not -name ".gitignore" -exec rm -rfd {} \; || true rm: refusing to remove '.' or '..' directory: skipping '.' rm -rf _build/* rm *-stamp rm: cannot remove '*-stamp': No such file or directory make[2]: [Makefile:32: clean] Error 1 (ignored) make[2]: Leaving directory '/<>/doc' make[1]: Leaving directory '/<>' dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild debian/rules override_dh_auto_build make[1]: Entering directory '/<>' chmod 0644 doc/examples/*.py dh_auto_build I: pybuild plugin_pyproject:129: Building wheel for python3.11 with "build" module I: pybuild base:305: python3.11 -m build --skip-dependency-check --no-isolation --wheel --outdir /<>/.pybuild/cpython3_3.11_dipy --config-setting compile-args=--verbose --config-setting setup-args=--wrap-mode=nodownload --config-setting setup-args=--prefix=/usr --config-setting setup-args=--sysconfdir=/etc --config-setting setup-args=--localstatedir=/var --config-setting setup-args=--libdir=lib/x86_64-linux-gnu * Building wheel... + meson setup /<> /<>/.mesonpy-e9nekpua -Dbuildtype=release -Db_ndebug=if-release -Db_vscrt=md --wrap-mode=nodownload --prefix=/usr --sysconfdir=/etc --localstatedir=/var --libdir=lib/x86_64-linux-gnu --native-file=/<>/.mesonpy-e9nekpua/meson-python-native-file.ini The Meson build system Version: 1.3.1 Source dir: /<> Build dir: /<>/.mesonpy-e9nekpua Build type: native build Project name: dipy Project version: 1.8.0 C compiler for the host machine: cc (gcc 13.2.0 "cc (Ubuntu 13.2.0-13ubuntu1) 13.2.0") C linker for the host machine: cc ld.bfd 2.42 C++ compiler for the host machine: c++ (gcc 13.2.0 "c++ (Ubuntu 13.2.0-13ubuntu1) 13.2.0") C++ linker for the host machine: c++ ld.bfd 2.42 Cython compiler for the host machine: cython (cython 3.0.8) Host machine cpu family: x86_64 Host machine cpu: x86_64 Program python found: YES (/usr/bin/python3.11) Did not find pkg-config by name 'pkg-config' Found pkg-config: NO Run-time dependency python found: YES 3.11 Program cython found: YES (/usr/bin/cython) Library m found: YES Compiler for C supports arguments -Wno-maybe-uninitialized: YES Compiler for C supports arguments -Wno-discarded-qualifiers: YES Compiler for C supports arguments -Wno-empty-body: YES Compiler for C supports arguments -Wno-implicit-function-declaration: YES Compiler for C supports arguments -Wno-parentheses: YES Compiler for C supports arguments -Wno-switch: YES Compiler for C supports arguments -Wno-unused-label: YES Compiler for C supports arguments -Wno-unused-variable: YES Compiler for C++ supports arguments -Wno-cpp: YES Compiler for C++ supports arguments -Wno-deprecated-declarations: YES Compiler for C++ supports arguments -Wno-class-memaccess: YES Compiler for C++ supports arguments -Wno-format-truncation: YES Compiler for C++ supports arguments -Wno-format-extra-args: YES Compiler for C++ supports arguments -Wno-format: NO Compiler for C++ supports arguments -Wno-non-virtual-dtor: YES Compiler for C++ supports arguments -Wno-sign-compare: YES Compiler for C++ supports arguments -Wno-switch: YES Compiler for C++ supports arguments -Wno-terminate: YES Compiler for C++ supports arguments -Wno-unused-but-set-variable: YES Compiler for C++ supports arguments -Wno-unused-function: YES Compiler for C++ supports arguments -Wno-unused-local-typedefs: YES Compiler for C++ supports arguments -Wno-unused-variable: YES Compiler for C++ supports arguments -Wno-int-in-bool-context: YES Run-time dependency OpenMP found: YES 4.5 Checking if "SSE intrinsics" compiles: YES Checking if "compiler supports SSE4.1 intrinsics" : links: NO Checking if "compiler supports AVX intrinsics" : links: NO Checking if "ARM NEON intrinsics" compiles: NO Build targets in project: 44 dipy 1.8.0 User defined options Native files : /<>/.mesonpy-e9nekpua/meson-python-native-file.ini buildtype : release libdir : lib/x86_64-linux-gnu localstatedir: /var prefix : /usr sysconfdir : /etc wrap_mode : nodownload b_ndebug : if-release b_vscrt : md Found ninja-1.11.1 at /usr/bin/ninja Generating targets: 0%| | 0/44 eta ? Writing build.ninja: 0%| | 0/184 eta ? + /usr/bin/ninja --verbose [1/120] /usr/bin/meson --internal copy ../dipy/../src/dpy_math.h dipy/dpy_math.h [2/120] /usr/bin/python3.11 ../dipy/../tools/version_utils.py --source-root .. [3/120] /usr/bin/meson --internal copy ../dipy/../src/safe_openmp.pxd dipy/safe_openmp.pxd [4/120] /usr/bin/meson --internal copy ../dipy/../src/cythonutils.h dipy/cythonutils.h [5/120] /usr/bin/meson --internal copy ../dipy/__init__.py dipy/__init__.py [6/120] /usr/bin/meson --internal copy ../dipy/../src/conditional_omp.h dipy/conditional_omp.h [7/120] /usr/bin/cython -3 --fast-fail --output-file dipy/align/bundlemin.cpython-311-x86_64-linux-gnu.so.p/bundlemin.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/align/bundlemin.pyx [8/120] /usr/bin/cython -3 --fast-fail --output-file dipy/align/transforms.cpython-311-x86_64-linux-gnu.so.p/transforms.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/align/transforms.pyx [9/120] /usr/bin/cython -3 --fast-fail --output-file dipy/align/expectmax.cpython-311-x86_64-linux-gnu.so.p/expectmax.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/align/expectmax.pyx [10/120] /usr/bin/cython -3 --fast-fail --output-file dipy/align/crosscorr.cpython-311-x86_64-linux-gnu.so.p/crosscorr.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/align/crosscorr.pyx performance hint: /<>/dipy/align/crosscorr.pyx:56:5: Exception check on '_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_update_factors' to allow an error code to be returned. performance hint: /<>/dipy/align/crosscorr.pyx:204:35: Exception check after calling '__pyx_fuse_0_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_update_factors' to allow an error code to be returned. performance hint: /<>/dipy/align/crosscorr.pyx:244:39: Exception check after calling '__pyx_fuse_0_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_update_factors' to allow an error code to be returned. performance hint: /<>/dipy/align/crosscorr.pyx:247:43: Exception check after calling '__pyx_fuse_0_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_update_factors' to allow an error code to be returned. performance hint: /<>/dipy/align/crosscorr.pyx:250:47: Exception check after calling '__pyx_fuse_0_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_update_factors' to allow an error code to be returned. performance hint: /<>/dipy/align/crosscorr.pyx:253:43: Exception check after calling '__pyx_fuse_0_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_update_factors' to allow an error code to be returned. performance hint: /<>/dipy/align/crosscorr.pyx:256:39: Exception check after calling '__pyx_fuse_0_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_update_factors' to allow an error code to be returned. performance hint: /<>/dipy/align/crosscorr.pyx:259:43: Exception check after calling '__pyx_fuse_0_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_update_factors' to allow an error code to be returned. performance hint: /<>/dipy/align/crosscorr.pyx:263:39: Exception check after calling '__pyx_fuse_0_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_update_factors' to allow an error code to be returned. performance hint: /<>/dipy/align/crosscorr.pyx:204:35: Exception check after calling '__pyx_fuse_1_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_update_factors' to allow an error code to be returned. performance hint: /<>/dipy/align/crosscorr.pyx:244:39: Exception check after calling '__pyx_fuse_1_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_update_factors' to allow an error code to be returned. performance hint: /<>/dipy/align/crosscorr.pyx:247:43: Exception check after calling '__pyx_fuse_1_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_update_factors' to allow an error code to be returned. performance hint: /<>/dipy/align/crosscorr.pyx:250:47: Exception check after calling '__pyx_fuse_1_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_update_factors' to allow an error code to be returned. performance hint: /<>/dipy/align/crosscorr.pyx:253:43: Exception check after calling '__pyx_fuse_1_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_update_factors' to allow an error code to be returned. performance hint: /<>/dipy/align/crosscorr.pyx:256:39: Exception check after calling '__pyx_fuse_1_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_update_factors' to allow an error code to be returned. performance hint: /<>/dipy/align/crosscorr.pyx:259:43: Exception check after calling '__pyx_fuse_1_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_update_factors' to allow an error code to be returned. performance hint: /<>/dipy/align/crosscorr.pyx:263:39: Exception check after calling '__pyx_fuse_1_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_update_factors' to allow an error code to be returned. [11/120] /usr/bin/cython -3 --fast-fail --output-file dipy/align/parzenhist.cpython-311-x86_64-linux-gnu.so.p/parzenhist.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/align/parzenhist.pyx performance hint: /<>/dipy/align/parzenhist.pyx:923:59: Exception check after calling '_jacobian' will always require the GIL to be acquired. Declare '_jacobian' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/parzenhist.pyx:923:59: Exception check after calling '_jacobian' will always require the GIL to be acquired. Declare '_jacobian' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/parzenhist.pyx:1035:63: Exception check after calling '_jacobian' will always require the GIL to be acquired. Declare '_jacobian' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/parzenhist.pyx:1035:63: Exception check after calling '_jacobian' will always require the GIL to be acquired. Declare '_jacobian' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/parzenhist.pyx:1125:55: Exception check after calling '_jacobian' will always require the GIL to be acquired. Declare '_jacobian' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/parzenhist.pyx:1125:55: Exception check after calling '_jacobian' will always require the GIL to be acquired. Declare '_jacobian' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/parzenhist.pyx:1216:55: Exception check after calling '_jacobian' will always require the GIL to be acquired. Declare '_jacobian' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/parzenhist.pyx:1216:55: Exception check after calling '_jacobian' will always require the GIL to be acquired. Declare '_jacobian' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. [12/120] /usr/bin/cython -3 --fast-fail --output-file dipy/align/sumsqdiff.cpython-311-x86_64-linux-gnu.so.p/sumsqdiff.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/align/sumsqdiff.pyx performance hint: /<>/dipy/align/sumsqdiff.pyx:15:5: Exception check on '_solve_2d_symmetric_positive_definite' will always require the GIL to be acquired. Possible solutions: 1. Declare '_solve_2d_symmetric_positive_definite' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_solve_2d_symmetric_positive_definite' to allow an error code to be returned. performance hint: /<>/dipy/align/sumsqdiff.pyx:274:61: Exception check after calling '_solve_2d_symmetric_positive_definite' will always require the GIL to be acquired. Possible solutions: 1. Declare '_solve_2d_symmetric_positive_definite' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_solve_2d_symmetric_positive_definite' to allow an error code to be returned. performance hint: /<>/dipy/align/sumsqdiff.pyx:274:61: Exception check after calling '_solve_2d_symmetric_positive_definite' will always require the GIL to be acquired. Possible solutions: 1. Declare '_solve_2d_symmetric_positive_definite' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_solve_2d_symmetric_positive_definite' to allow an error code to be returned. [13/120] cc -Idipy/align/bundlemin.cpython-311-x86_64-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/align/bundlemin.cpython-311-x86_64-linux-gnu.so.p/meson-generated_bundlemin.c.o -MF dipy/align/bundlemin.cpython-311-x86_64-linux-gnu.so.p/meson-generated_bundlemin.c.o.d -o dipy/align/bundlemin.cpython-311-x86_64-linux-gnu.so.p/meson-generated_bundlemin.c.o -c dipy/align/bundlemin.cpython-311-x86_64-linux-gnu.so.p/bundlemin.c [14/120] cc -Idipy/align/transforms.cpython-311-x86_64-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/align/transforms.cpython-311-x86_64-linux-gnu.so.p/meson-generated_transforms.c.o -MF dipy/align/transforms.cpython-311-x86_64-linux-gnu.so.p/meson-generated_transforms.c.o.d -o dipy/align/transforms.cpython-311-x86_64-linux-gnu.so.p/meson-generated_transforms.c.o -c dipy/align/transforms.cpython-311-x86_64-linux-gnu.so.p/transforms.c [15/120] cc -o dipy/align/bundlemin.cpython-311-x86_64-linux-gnu.so dipy/align/bundlemin.cpython-311-x86_64-linux-gnu.so.p/meson-generated_bundlemin.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [16/120] cc -o dipy/align/transforms.cpython-311-x86_64-linux-gnu.so dipy/align/transforms.cpython-311-x86_64-linux-gnu.so.p/meson-generated_transforms.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [17/120] /usr/bin/cython -3 --fast-fail --output-file dipy/core/interpolation.cpython-311-x86_64-linux-gnu.so.p/interpolation.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/core/interpolation.pyx performance hint: /<>/dipy/core/interpolation.pyx:117:5: Exception check on 'splitoffset' will always require the GIL to be acquired. Possible solutions: 1. Declare 'splitoffset' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'splitoffset' to allow an error code to be returned. performance hint: /<>/dipy/core/interpolation.pyx:245:5: Exception check on '_trilinear_interpolation_iso' will always require the GIL to be acquired. Possible solutions: 1. Declare '_trilinear_interpolation_iso' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_trilinear_interpolation_iso' to allow an error code to be returned. performance hint: /<>/dipy/core/interpolation.pyx:233:40: Exception check after calling '_trilinear_interpolation_iso' will always require the GIL to be acquired. Possible solutions: 1. Declare '_trilinear_interpolation_iso' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_trilinear_interpolation_iso' to allow an error code to be returned. [18/120] /usr/bin/cython -3 --fast-fail --output-file dipy/align/vector_fields.cpython-311-x86_64-linux-gnu.so.p/vector_fields.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/align/vector_fields.pyx performance hint: /<>/dipy/align/vector_fields.pyx:35:5: Exception check on '_compose_vector_fields_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '_compose_vector_fields_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_compose_vector_fields_2d' to allow an error code to be returned. performance hint: /<>/dipy/align/vector_fields.pyx:234:5: Exception check on '_compose_vector_fields_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '_compose_vector_fields_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_compose_vector_fields_3d' to allow an error code to be returned. performance hint: /<>/dipy/align/vector_fields.pyx:144:53: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:144:53: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:351:57: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:351:57: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:525:47: Exception check after calling '__pyx_fuse_0_compose_vector_fields_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_compose_vector_fields_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_compose_vector_fields_2d' to allow an error code to be returned. performance hint: /<>/dipy/align/vector_fields.pyx:525:47: Exception check after calling '__pyx_fuse_1_compose_vector_fields_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_compose_vector_fields_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_compose_vector_fields_2d' to allow an error code to be returned. performance hint: /<>/dipy/align/vector_fields.pyx:631:47: Exception check after calling '__pyx_fuse_0_compose_vector_fields_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_compose_vector_fields_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_compose_vector_fields_3d' to allow an error code to be returned. performance hint: /<>/dipy/align/vector_fields.pyx:631:47: Exception check after calling '__pyx_fuse_1_compose_vector_fields_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_compose_vector_fields_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_compose_vector_fields_3d' to allow an error code to be returned. performance hint: /<>/dipy/align/vector_fields.pyx:760:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:760:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:886:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:886:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1238:53: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1238:53: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1308:53: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1308:53: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1422:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1452:61: Exception check after calling '__pyx_fuse_0_interpolate_scalar_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1422:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1452:61: Exception check after calling '__pyx_fuse_1_interpolate_scalar_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1519:61: Exception check after calling '__pyx_fuse_0_interpolate_scalar_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1519:61: Exception check after calling '__pyx_fuse_1_interpolate_scalar_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_0_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_0_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_1_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_1_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_2_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_2_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_2_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_2_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_3_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_3_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_3_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_3_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_4_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_4_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_4_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_4_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_5_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_5_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_5_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_5_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_6_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_6_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_6_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_6_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1717:53: Exception check after calling '__pyx_fuse_0_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1717:53: Exception check after calling '__pyx_fuse_1_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1717:53: Exception check after calling '__pyx_fuse_2_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_2_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1717:53: Exception check after calling '__pyx_fuse_3_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_3_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1717:53: Exception check after calling '__pyx_fuse_4_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_4_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1717:53: Exception check after calling '__pyx_fuse_5_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_5_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1717:53: Exception check after calling '__pyx_fuse_6_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_6_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1811:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1834:48: Exception check after calling '__pyx_fuse_0_interpolate_scalar_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1811:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1834:48: Exception check after calling '__pyx_fuse_1_interpolate_scalar_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1894:48: Exception check after calling '__pyx_fuse_0_interpolate_scalar_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1894:48: Exception check after calling '__pyx_fuse_1_interpolate_scalar_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_0_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_0_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_1_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_1_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_2_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_2_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_2_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_2_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_3_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_3_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_3_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_3_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_4_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_4_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_4_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_4_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_5_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_5_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_5_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_5_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_6_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_6_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_6_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_6_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2071:49: Exception check after calling '__pyx_fuse_0_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2071:49: Exception check after calling '__pyx_fuse_1_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2071:49: Exception check after calling '__pyx_fuse_2_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_2_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2071:49: Exception check after calling '__pyx_fuse_3_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_3_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2071:49: Exception check after calling '__pyx_fuse_4_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_4_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2071:49: Exception check after calling '__pyx_fuse_5_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_5_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2071:49: Exception check after calling '__pyx_fuse_6_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_6_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2607:66: Exception check after calling '__pyx_fuse_0_interpolate_scalar_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2623:66: Exception check after calling '__pyx_fuse_0_interpolate_scalar_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2607:66: Exception check after calling '__pyx_fuse_1_interpolate_scalar_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2623:66: Exception check after calling '__pyx_fuse_1_interpolate_scalar_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2693:58: Exception check after calling '__pyx_fuse_0_interpolate_scalar_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2709:58: Exception check after calling '__pyx_fuse_0_interpolate_scalar_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2693:58: Exception check after calling '__pyx_fuse_1_interpolate_scalar_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2709:58: Exception check after calling '__pyx_fuse_1_interpolate_scalar_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2780:62: Exception check after calling '__pyx_fuse_0_interpolate_scalar_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2792:62: Exception check after calling '__pyx_fuse_0_interpolate_scalar_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2780:62: Exception check after calling '__pyx_fuse_1_interpolate_scalar_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2792:62: Exception check after calling '__pyx_fuse_1_interpolate_scalar_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2856:58: Exception check after calling '__pyx_fuse_0_interpolate_scalar_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2868:58: Exception check after calling '__pyx_fuse_0_interpolate_scalar_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2856:58: Exception check after calling '__pyx_fuse_1_interpolate_scalar_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2868:58: Exception check after calling '__pyx_fuse_1_interpolate_scalar_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. [19/120] cc -Idipy/align/expectmax.cpython-311-x86_64-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/align/expectmax.cpython-311-x86_64-linux-gnu.so.p/meson-generated_expectmax.c.o -MF dipy/align/expectmax.cpython-311-x86_64-linux-gnu.so.p/meson-generated_expectmax.c.o.d -o dipy/align/expectmax.cpython-311-x86_64-linux-gnu.so.p/meson-generated_expectmax.c.o -c dipy/align/expectmax.cpython-311-x86_64-linux-gnu.so.p/expectmax.c [20/120] cc -Idipy/align/parzenhist.cpython-311-x86_64-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/align/parzenhist.cpython-311-x86_64-linux-gnu.so.p/meson-generated_parzenhist.c.o -MF dipy/align/parzenhist.cpython-311-x86_64-linux-gnu.so.p/meson-generated_parzenhist.c.o.d -o dipy/align/parzenhist.cpython-311-x86_64-linux-gnu.so.p/meson-generated_parzenhist.c.o -c dipy/align/parzenhist.cpython-311-x86_64-linux-gnu.so.p/parzenhist.c [21/120] cc -Idipy/align/sumsqdiff.cpython-311-x86_64-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/align/sumsqdiff.cpython-311-x86_64-linux-gnu.so.p/meson-generated_sumsqdiff.c.o -MF dipy/align/sumsqdiff.cpython-311-x86_64-linux-gnu.so.p/meson-generated_sumsqdiff.c.o.d -o dipy/align/sumsqdiff.cpython-311-x86_64-linux-gnu.so.p/meson-generated_sumsqdiff.c.o -c dipy/align/sumsqdiff.cpython-311-x86_64-linux-gnu.so.p/sumsqdiff.c [22/120] cc -Idipy/align/crosscorr.cpython-311-x86_64-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/align/crosscorr.cpython-311-x86_64-linux-gnu.so.p/meson-generated_crosscorr.c.o -MF dipy/align/crosscorr.cpython-311-x86_64-linux-gnu.so.p/meson-generated_crosscorr.c.o.d -o dipy/align/crosscorr.cpython-311-x86_64-linux-gnu.so.p/meson-generated_crosscorr.c.o -c dipy/align/crosscorr.cpython-311-x86_64-linux-gnu.so.p/crosscorr.c [23/120] cc -o dipy/align/sumsqdiff.cpython-311-x86_64-linux-gnu.so dipy/align/sumsqdiff.cpython-311-x86_64-linux-gnu.so.p/meson-generated_sumsqdiff.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [24/120] cc -o dipy/align/expectmax.cpython-311-x86_64-linux-gnu.so dipy/align/expectmax.cpython-311-x86_64-linux-gnu.so.p/meson-generated_expectmax.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [25/120] cc -o dipy/align/parzenhist.cpython-311-x86_64-linux-gnu.so dipy/align/parzenhist.cpython-311-x86_64-linux-gnu.so.p/meson-generated_parzenhist.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [26/120] /usr/bin/cython -3 --fast-fail --output-file dipy/denoise/denspeed.cpython-311-x86_64-linux-gnu.so.p/denspeed.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/denoise/denspeed.pyx [27/120] cc -o dipy/align/crosscorr.cpython-311-x86_64-linux-gnu.so dipy/align/crosscorr.cpython-311-x86_64-linux-gnu.so.p/meson-generated_crosscorr.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [28/120] /usr/bin/cython -3 --fast-fail --output-file dipy/denoise/nlmeans_block.cpython-311-x86_64-linux-gnu.so.p/nlmeans_block.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/denoise/nlmeans_block.pyx performance hint: /<>/dipy/denoise/nlmeans_block.pyx:74:5: Exception check on '_average_block' will always require the GIL to be acquired. Possible solutions: 1. Declare '_average_block' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_average_block' to allow an error code to be returned. performance hint: /<>/dipy/denoise/nlmeans_block.pyx:120:5: Exception check on '_value_block' will always require the GIL to be acquired. Possible solutions: 1. Declare '_value_block' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_value_block' to allow an error code to be returned. performance hint: /<>/dipy/denoise/nlmeans_block.pyx:428:38: Exception check after calling '_average_block' will always require the GIL to be acquired. Possible solutions: 1. Declare '_average_block' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_average_block' to allow an error code to be returned. performance hint: /<>/dipy/denoise/nlmeans_block.pyx:430:36: Exception check after calling '_value_block' will always require the GIL to be acquired. Possible solutions: 1. Declare '_value_block' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_value_block' to allow an error code to be returned. performance hint: /<>/dipy/denoise/nlmeans_block.pyx:453:54: Exception check after calling '_average_block' will always require the GIL to be acquired. Possible solutions: 1. Declare '_average_block' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_average_block' to allow an error code to be returned. performance hint: /<>/dipy/denoise/nlmeans_block.pyx:458:40: Exception check after calling '_value_block' will always require the GIL to be acquired. Possible solutions: 1. Declare '_value_block' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_value_block' to allow an error code to be returned. [29/120] /usr/bin/cython -3 --fast-fail --output-file dipy/denoise/enhancement_kernel.cpython-311-x86_64-linux-gnu.so.p/enhancement_kernel.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/denoise/enhancement_kernel.pyx performance hint: /<>/dipy/denoise/enhancement_kernel.pyx:399:5: Exception check on 'euler_angles' will always require the GIL to be acquired. Declare 'euler_angles' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/denoise/enhancement_kernel.pyx:444:5: Exception check on 'R' will always require the GIL to be acquired. Declare 'R' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/denoise/enhancement_kernel.pyx:206:67: Exception check after calling 'k2' will always require the GIL to be acquired. Declare 'k2' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/denoise/enhancement_kernel.pyx:247:30: Exception check after calling 'k2' will always require the GIL to be acquired. Declare 'k2' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. [30/120] /usr/bin/cython -3 --fast-fail --output-file dipy/denoise/pca_noise_estimate.cpython-311-x86_64-linux-gnu.so.p/pca_noise_estimate.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/denoise/pca_noise_estimate.pyx warning: /<>/dipy/denoise/pca_noise_estimate.pyx:95:49: the result of using negative indices inside of code sections marked as 'wraparound=False' is undefined [31/120] cc -Idipy/denoise/denspeed.cpython-311-x86_64-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/denoise/denspeed.cpython-311-x86_64-linux-gnu.so.p/meson-generated_denspeed.c.o -MF dipy/denoise/denspeed.cpython-311-x86_64-linux-gnu.so.p/meson-generated_denspeed.c.o.d -o dipy/denoise/denspeed.cpython-311-x86_64-linux-gnu.so.p/meson-generated_denspeed.c.o -c dipy/denoise/denspeed.cpython-311-x86_64-linux-gnu.so.p/denspeed.c [32/120] cc -Idipy/denoise/pca_noise_estimate.cpython-311-x86_64-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/denoise/pca_noise_estimate.cpython-311-x86_64-linux-gnu.so.p/meson-generated_pca_noise_estimate.c.o -MF dipy/denoise/pca_noise_estimate.cpython-311-x86_64-linux-gnu.so.p/meson-generated_pca_noise_estimate.c.o.d -o dipy/denoise/pca_noise_estimate.cpython-311-x86_64-linux-gnu.so.p/meson-generated_pca_noise_estimate.c.o -c dipy/denoise/pca_noise_estimate.cpython-311-x86_64-linux-gnu.so.p/pca_noise_estimate.c [33/120] cc -o dipy/denoise/denspeed.cpython-311-x86_64-linux-gnu.so dipy/denoise/denspeed.cpython-311-x86_64-linux-gnu.so.p/meson-generated_denspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [34/120] cc -Idipy/denoise/nlmeans_block.cpython-311-x86_64-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/denoise/nlmeans_block.cpython-311-x86_64-linux-gnu.so.p/meson-generated_nlmeans_block.c.o -MF dipy/denoise/nlmeans_block.cpython-311-x86_64-linux-gnu.so.p/meson-generated_nlmeans_block.c.o.d -o dipy/denoise/nlmeans_block.cpython-311-x86_64-linux-gnu.so.p/meson-generated_nlmeans_block.c.o -c dipy/denoise/nlmeans_block.cpython-311-x86_64-linux-gnu.so.p/nlmeans_block.c [35/120] /usr/bin/cython -3 --fast-fail --output-file dipy/denoise/shift_twist_convolution.cpython-311-x86_64-linux-gnu.so.p/shift_twist_convolution.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/denoise/shift_twist_convolution.pyx [36/120] cc -Idipy/denoise/enhancement_kernel.cpython-311-x86_64-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/denoise/enhancement_kernel.cpython-311-x86_64-linux-gnu.so.p/meson-generated_enhancement_kernel.c.o -MF dipy/denoise/enhancement_kernel.cpython-311-x86_64-linux-gnu.so.p/meson-generated_enhancement_kernel.c.o.d -o dipy/denoise/enhancement_kernel.cpython-311-x86_64-linux-gnu.so.p/meson-generated_enhancement_kernel.c.o -c dipy/denoise/enhancement_kernel.cpython-311-x86_64-linux-gnu.so.p/enhancement_kernel.c [37/120] cc -o dipy/denoise/pca_noise_estimate.cpython-311-x86_64-linux-gnu.so dipy/denoise/pca_noise_estimate.cpython-311-x86_64-linux-gnu.so.p/meson-generated_pca_noise_estimate.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [38/120] /usr/bin/cython -3 --fast-fail --output-file dipy/direction/bootstrap_direction_getter.cpython-311-x86_64-linux-gnu.so.p/bootstrap_direction_getter.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/direction/bootstrap_direction_getter.pyx warning: /<>/dipy/direction/bootstrap_direction_getter.pyx:153:20: Use boundscheck(False) for faster access [39/120] cc -o dipy/denoise/nlmeans_block.cpython-311-x86_64-linux-gnu.so dipy/denoise/nlmeans_block.cpython-311-x86_64-linux-gnu.so.p/meson-generated_nlmeans_block.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [40/120] cc -o dipy/denoise/enhancement_kernel.cpython-311-x86_64-linux-gnu.so dipy/denoise/enhancement_kernel.cpython-311-x86_64-linux-gnu.so.p/meson-generated_enhancement_kernel.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [41/120] /usr/bin/cython -3 --fast-fail --output-file dipy/direction/closest_peak_direction_getter.cpython-311-x86_64-linux-gnu.so.p/closest_peak_direction_getter.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/direction/closest_peak_direction_getter.pyx performance hint: /<>/dipy/direction/closest_peak_direction_getter.pyx:108:36: Exception check after calling 'get_pmf_c' will always require the GIL to be acquired. Declare 'get_pmf_c' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. [42/120] cc -Idipy/core/interpolation.cpython-311-x86_64-linux-gnu.so.p -Idipy/core -I../dipy/core -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/core/interpolation.cpython-311-x86_64-linux-gnu.so.p/meson-generated_interpolation.c.o -MF dipy/core/interpolation.cpython-311-x86_64-linux-gnu.so.p/meson-generated_interpolation.c.o.d -o dipy/core/interpolation.cpython-311-x86_64-linux-gnu.so.p/meson-generated_interpolation.c.o -c dipy/core/interpolation.cpython-311-x86_64-linux-gnu.so.p/interpolation.c [43/120] /usr/bin/cython -3 --fast-fail --output-file dipy/direction/pmf.cpython-311-x86_64-linux-gnu.so.p/pmf.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/direction/pmf.pyx performance hint: /<>/dipy/direction/pmf.pyx:57:40: Exception check after calling 'find_closest' will always require the GIL to be acquired. Declare 'find_closest' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/direction/pmf.pyx:58:29: Exception check after calling 'get_pmf_c' will always require the GIL to be acquired. Declare 'get_pmf_c' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/direction/pmf.pyx:83:36: Exception check after calling 'trilinear_interpolate4d_c' will always require the GIL to be acquired. Declare 'trilinear_interpolate4d_c' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/direction/pmf.pyx:84:30: Exception check after calling '_PmfGen__clear_pmf' will always require the GIL to be acquired. Possible solutions: 1. Declare '_PmfGen__clear_pmf' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_PmfGen__clear_pmf' to allow an error code to be returned. performance hint: /<>/dipy/direction/pmf.pyx:95:31: Exception check after calling 'find_closest' will always require the GIL to be acquired. Declare 'find_closest' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/direction/pmf.pyx:97:36: Exception check after calling 'trilinear_interpolate4d_c' will always require the GIL to be acquired. Declare 'trilinear_interpolate4d_c' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/direction/pmf.pyx:100:30: Exception check after calling '_PmfGen__clear_pmf' will always require the GIL to be acquired. Possible solutions: 1. Declare '_PmfGen__clear_pmf' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_PmfGen__clear_pmf' to allow an error code to be returned. performance hint: /<>/dipy/direction/pmf.pyx:132:36: Exception check after calling 'trilinear_interpolate4d_c' will always require the GIL to be acquired. Declare 'trilinear_interpolate4d_c' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/direction/pmf.pyx:133:30: Exception check after calling '_PmfGen__clear_pmf' will always require the GIL to be acquired. Possible solutions: 1. Declare '_PmfGen__clear_pmf' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_PmfGen__clear_pmf' to allow an error code to be returned. [44/120] cc -Idipy/denoise/shift_twist_convolution.cpython-311-x86_64-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/denoise/shift_twist_convolution.cpython-311-x86_64-linux-gnu.so.p/meson-generated_shift_twist_convolution.c.o -MF dipy/denoise/shift_twist_convolution.cpython-311-x86_64-linux-gnu.so.p/meson-generated_shift_twist_convolution.c.o.d -o dipy/denoise/shift_twist_convolution.cpython-311-x86_64-linux-gnu.so.p/meson-generated_shift_twist_convolution.c.o -c dipy/denoise/shift_twist_convolution.cpython-311-x86_64-linux-gnu.so.p/shift_twist_convolution.c [45/120] cc -o dipy/denoise/shift_twist_convolution.cpython-311-x86_64-linux-gnu.so dipy/denoise/shift_twist_convolution.cpython-311-x86_64-linux-gnu.so.p/meson-generated_shift_twist_convolution.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [46/120] cc -o dipy/core/interpolation.cpython-311-x86_64-linux-gnu.so dipy/core/interpolation.cpython-311-x86_64-linux-gnu.so.p/meson-generated_interpolation.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [47/120] /usr/bin/cython -3 --fast-fail --output-file dipy/direction/ptt_direction_getter.cpython-311-x86_64-linux-gnu.so.p/ptt_direction_getter.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/direction/ptt_direction_getter.pyx [48/120] /usr/bin/cython -3 --fast-fail --output-file dipy/direction/probabilistic_direction_getter.cpython-311-x86_64-linux-gnu.so.p/probabilistic_direction_getter.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/direction/probabilistic_direction_getter.pyx performance hint: /<>/dipy/direction/probabilistic_direction_getter.pyx:105:18: Exception check after calling 'cumsum' will always require the GIL to be acquired. Possible solutions: 1. Declare 'cumsum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'cumsum' to allow an error code to be returned. performance hint: /<>/dipy/direction/probabilistic_direction_getter.pyx:184:26: Exception check after calling 'copy_point' will always require the GIL to be acquired. Possible solutions: 1. Declare 'copy_point' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'copy_point' to allow an error code to be returned. performance hint: /<>/dipy/direction/probabilistic_direction_getter.pyx:189:26: Exception check after calling 'copy_point' will always require the GIL to be acquired. Possible solutions: 1. Declare 'copy_point' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'copy_point' to allow an error code to be returned. [49/120] cc -Idipy/direction/bootstrap_direction_getter.cpython-311-x86_64-linux-gnu.so.p -Idipy/direction -I../dipy/direction -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/direction/bootstrap_direction_getter.cpython-311-x86_64-linux-gnu.so.p/meson-generated_bootstrap_direction_getter.c.o -MF dipy/direction/bootstrap_direction_getter.cpython-311-x86_64-linux-gnu.so.p/meson-generated_bootstrap_direction_getter.c.o.d -o dipy/direction/bootstrap_direction_getter.cpython-311-x86_64-linux-gnu.so.p/meson-generated_bootstrap_direction_getter.c.o -c dipy/direction/bootstrap_direction_getter.cpython-311-x86_64-linux-gnu.so.p/bootstrap_direction_getter.c [50/120] cc -Idipy/direction/closest_peak_direction_getter.cpython-311-x86_64-linux-gnu.so.p -Idipy/direction -I../dipy/direction -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/direction/closest_peak_direction_getter.cpython-311-x86_64-linux-gnu.so.p/meson-generated_closest_peak_direction_getter.c.o -MF dipy/direction/closest_peak_direction_getter.cpython-311-x86_64-linux-gnu.so.p/meson-generated_closest_peak_direction_getter.c.o.d -o dipy/direction/closest_peak_direction_getter.cpython-311-x86_64-linux-gnu.so.p/meson-generated_closest_peak_direction_getter.c.o -c dipy/direction/closest_peak_direction_getter.cpython-311-x86_64-linux-gnu.so.p/closest_peak_direction_getter.c [51/120] cc -Idipy/direction/pmf.cpython-311-x86_64-linux-gnu.so.p -Idipy/direction -I../dipy/direction -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/direction/pmf.cpython-311-x86_64-linux-gnu.so.p/meson-generated_pmf.c.o -MF dipy/direction/pmf.cpython-311-x86_64-linux-gnu.so.p/meson-generated_pmf.c.o.d -o dipy/direction/pmf.cpython-311-x86_64-linux-gnu.so.p/meson-generated_pmf.c.o -c dipy/direction/pmf.cpython-311-x86_64-linux-gnu.so.p/pmf.c [52/120] cc -o dipy/direction/closest_peak_direction_getter.cpython-311-x86_64-linux-gnu.so dipy/direction/closest_peak_direction_getter.cpython-311-x86_64-linux-gnu.so.p/meson-generated_closest_peak_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [53/120] cc -o dipy/direction/bootstrap_direction_getter.cpython-311-x86_64-linux-gnu.so dipy/direction/bootstrap_direction_getter.cpython-311-x86_64-linux-gnu.so.p/meson-generated_bootstrap_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [54/120] cc -o dipy/direction/pmf.cpython-311-x86_64-linux-gnu.so dipy/direction/pmf.cpython-311-x86_64-linux-gnu.so.p/meson-generated_pmf.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [55/120] /usr/bin/cython -3 --fast-fail --output-file dipy/reconst/quick_squash.cpython-311-x86_64-linux-gnu.so.p/quick_squash.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/reconst/quick_squash.pyx [56/120] /usr/bin/cython -3 --fast-fail --output-file dipy/reconst/eudx_direction_getter.cpython-311-x86_64-linux-gnu.so.p/eudx_direction_getter.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/reconst/eudx_direction_getter.pyx [57/120] /usr/bin/cython -3 --fast-fail --output-file dipy/reconst/recspeed.cpython-311-x86_64-linux-gnu.so.p/recspeed.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/reconst/recspeed.pyx performance hint: /<>/dipy/reconst/recspeed.pyx:260:5: Exception check on '_cosort' will always require the GIL to be acquired. Possible solutions: 1. Declare '_cosort' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_cosort' to allow an error code to be returned. [58/120] cc -Idipy/direction/probabilistic_direction_getter.cpython-311-x86_64-linux-gnu.so.p -Idipy/direction -I../dipy/direction -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/direction/probabilistic_direction_getter.cpython-311-x86_64-linux-gnu.so.p/meson-generated_probabilistic_direction_getter.c.o -MF dipy/direction/probabilistic_direction_getter.cpython-311-x86_64-linux-gnu.so.p/meson-generated_probabilistic_direction_getter.c.o.d -o dipy/direction/probabilistic_direction_getter.cpython-311-x86_64-linux-gnu.so.p/meson-generated_probabilistic_direction_getter.c.o -c dipy/direction/probabilistic_direction_getter.cpython-311-x86_64-linux-gnu.so.p/probabilistic_direction_getter.c [59/120] cc -Idipy/direction/ptt_direction_getter.cpython-311-x86_64-linux-gnu.so.p -Idipy/direction -I../dipy/direction -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/direction/ptt_direction_getter.cpython-311-x86_64-linux-gnu.so.p/meson-generated_ptt_direction_getter.c.o -MF dipy/direction/ptt_direction_getter.cpython-311-x86_64-linux-gnu.so.p/meson-generated_ptt_direction_getter.c.o.d -o dipy/direction/ptt_direction_getter.cpython-311-x86_64-linux-gnu.so.p/meson-generated_ptt_direction_getter.c.o -c dipy/direction/ptt_direction_getter.cpython-311-x86_64-linux-gnu.so.p/ptt_direction_getter.c [60/120] cc -o dipy/direction/probabilistic_direction_getter.cpython-311-x86_64-linux-gnu.so dipy/direction/probabilistic_direction_getter.cpython-311-x86_64-linux-gnu.so.p/meson-generated_probabilistic_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [61/120] /usr/bin/cython -3 --fast-fail --output-file dipy/reconst/vec_val_sum.cpython-311-x86_64-linux-gnu.so.p/vec_val_sum.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/reconst/vec_val_sum.pyx [62/120] cc -o dipy/direction/ptt_direction_getter.cpython-311-x86_64-linux-gnu.so dipy/direction/ptt_direction_getter.cpython-311-x86_64-linux-gnu.so.p/meson-generated_ptt_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [63/120] cc -Idipy/reconst/quick_squash.cpython-311-x86_64-linux-gnu.so.p -Idipy/reconst -I../dipy/reconst -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/reconst/quick_squash.cpython-311-x86_64-linux-gnu.so.p/meson-generated_quick_squash.c.o -MF dipy/reconst/quick_squash.cpython-311-x86_64-linux-gnu.so.p/meson-generated_quick_squash.c.o.d -o dipy/reconst/quick_squash.cpython-311-x86_64-linux-gnu.so.p/meson-generated_quick_squash.c.o -c dipy/reconst/quick_squash.cpython-311-x86_64-linux-gnu.so.p/quick_squash.c [64/120] /usr/bin/cython -3 --fast-fail --output-file dipy/segment/clustering_algorithms.cpython-311-x86_64-linux-gnu.so.p/clustering_algorithms.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/segment/clustering_algorithms.pyx warning: /<>/dipy/segment/metricspeed.pxd:9:87: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/metricspeed.pxd:10:86: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pxd:7:71: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pxd:8:78: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pxd:62:100: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pxd:63:60: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pxd:72:108: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pxd:73:68: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pxd:74:85: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pxd:89:95: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pxd:90:91: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pxd:91:75: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. [65/120] cc -Idipy/reconst/eudx_direction_getter.cpython-311-x86_64-linux-gnu.so.p -Idipy/reconst -I../dipy/reconst -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/reconst/eudx_direction_getter.cpython-311-x86_64-linux-gnu.so.p/meson-generated_eudx_direction_getter.c.o -MF dipy/reconst/eudx_direction_getter.cpython-311-x86_64-linux-gnu.so.p/meson-generated_eudx_direction_getter.c.o.d -o dipy/reconst/eudx_direction_getter.cpython-311-x86_64-linux-gnu.so.p/meson-generated_eudx_direction_getter.c.o -c dipy/reconst/eudx_direction_getter.cpython-311-x86_64-linux-gnu.so.p/eudx_direction_getter.c [66/120] cc -o dipy/reconst/eudx_direction_getter.cpython-311-x86_64-linux-gnu.so dipy/reconst/eudx_direction_getter.cpython-311-x86_64-linux-gnu.so.p/meson-generated_eudx_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [67/120] cc -o dipy/reconst/quick_squash.cpython-311-x86_64-linux-gnu.so dipy/reconst/quick_squash.cpython-311-x86_64-linux-gnu.so.p/meson-generated_quick_squash.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [68/120] /usr/bin/cython -3 --fast-fail --output-file dipy/segment/clusteringspeed.cpython-311-x86_64-linux-gnu.so.p/clusteringspeed.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/segment/clusteringspeed.pyx warning: /<>/dipy/segment/clusteringspeed.pxd:62:100: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pxd:63:60: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pxd:72:108: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pxd:73:68: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pxd:74:85: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pxd:89:95: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pxd:90:91: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pxd:91:75: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/metricspeed.pxd:9:87: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/metricspeed.pxd:10:86: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pxd:7:71: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pxd:8:78: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pyx:331:100: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pyx:348:60: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pyx:412:108: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pyx:439:85: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pyx:469:68: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pyx:507:95: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pyx:543:91: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pyx:604:75: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. performance hint: /<>/dipy/segment/clusteringspeed.pyx:56:5: Exception check on 'aabb_creation' will always require the GIL to be acquired. Possible solutions: 1. Declare 'aabb_creation' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'aabb_creation' to allow an error code to be returned. performance hint: /<>/dipy/segment/clusteringspeed.pyx:102:37: Exception check after calling 'create_memview_2d' will always require the GIL to be acquired. Declare 'create_memview_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/clusteringspeed.pyx:201:21: Exception check after calling 'aabb_creation' will always require the GIL to be acquired. Possible solutions: 1. Declare 'aabb_creation' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'aabb_creation' to allow an error code to be returned. performance hint: /<>/dipy/segment/clusteringspeed.pyx:209:25: Exception check after calling '_update_node' will always require the GIL to be acquired. Possible solutions: 1. Declare '_update_node' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_update_node' to allow an error code to be returned. performance hint: /<>/dipy/segment/clusteringspeed.pyx:240:48: Exception check after calling '_add_child' will always require the GIL to be acquired. Declare '_add_child' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/clusteringspeed.pyx:244:23: Exception check after calling '_insert_in' will always require the GIL to be acquired. Possible solutions: 1. Declare '_insert_in' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_insert_in' to allow an error code to be returned. performance hint: /<>/dipy/segment/clusteringspeed.pyx:437:25: Exception check after calling 'c_assign' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_assign' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_assign' to allow an error code to be returned. performance hint: /<>/dipy/segment/clusteringspeed.pyx:465:21: Exception check after calling 'aabb_creation' will always require the GIL to be acquired. Possible solutions: 1. Declare 'aabb_creation' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'aabb_creation' to allow an error code to be returned. performance hint: /<>/dipy/segment/clusteringspeed.pyx:485:70: Exception check after calling 'create_memview_2d' will always require the GIL to be acquired. Declare 'create_memview_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/clusteringspeed.pyx:486:79: Exception check after calling 'create_memview_2d' will always require the GIL to be acquired. Declare 'create_memview_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/clusteringspeed.pyx:488:21: Exception check after calling 'aabb_creation' will always require the GIL to be acquired. Possible solutions: 1. Declare 'aabb_creation' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'aabb_creation' to allow an error code to be returned. performance hint: /<>/dipy/segment/clusteringspeed.pyx:530:43: Exception check after calling 'c_size' will always require the GIL to be acquired. Declare 'c_size' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/clusteringspeed.pyx:566:68: Exception check after calling 'c_infer_shape' will always require the GIL to be acquired. Declare 'c_infer_shape' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/clusteringspeed.pyx:569:25: Exception check after calling 'same_shape' will always require the GIL to be acquired. Declare 'same_shape' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/clusteringspeed.pyx:579:37: Exception check after calling 'c_extract' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_extract' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_extract' to allow an error code to be returned. performance hint: /<>/dipy/segment/clusteringspeed.pyx:580:51: Exception check after calling 'find_nearest_cluster' will always require the GIL to be acquired. Declare 'find_nearest_cluster' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/clusteringspeed.pyx:584:41: Exception check after calling 'c_extract' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_extract' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_extract' to allow an error code to be returned. performance hint: /<>/dipy/segment/clusteringspeed.pyx:585:60: Exception check after calling 'find_nearest_cluster' will always require the GIL to be acquired. Declare 'find_nearest_cluster' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/clusteringspeed.pyx:598:77: Exception check after calling 'c_size' will always require the GIL to be acquired. Declare 'c_size' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/clusteringspeed.pyx:601:30: Exception check after calling 'c_assign' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_assign' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_assign' to allow an error code to be returned. [69/120] /usr/bin/cython -3 --fast-fail --output-file dipy/segment/cythonutils.cpython-311-x86_64-linux-gnu.so.p/cythonutils.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/segment/cythonutils.pyx performance hint: /<>/dipy/segment/cythonutils.pyx:14:5: Exception check on 'shape_from_memview' will always require the GIL to be acquired. Declare 'shape_from_memview' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/cythonutils.pyx:143:5: Exception check on 'free_memview_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare 'free_memview_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'free_memview_2d' to allow an error code to be returned. [70/120] cc -Idipy/reconst/vec_val_sum.cpython-311-x86_64-linux-gnu.so.p -Idipy/reconst -I../dipy/reconst -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/reconst/vec_val_sum.cpython-311-x86_64-linux-gnu.so.p/meson-generated_vec_val_sum.c.o -MF dipy/reconst/vec_val_sum.cpython-311-x86_64-linux-gnu.so.p/meson-generated_vec_val_sum.c.o.d -o dipy/reconst/vec_val_sum.cpython-311-x86_64-linux-gnu.so.p/meson-generated_vec_val_sum.c.o -c dipy/reconst/vec_val_sum.cpython-311-x86_64-linux-gnu.so.p/vec_val_sum.c [71/120] cc -Idipy/reconst/recspeed.cpython-311-x86_64-linux-gnu.so.p -Idipy/reconst -I../dipy/reconst -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/reconst/recspeed.cpython-311-x86_64-linux-gnu.so.p/meson-generated_recspeed.c.o -MF dipy/reconst/recspeed.cpython-311-x86_64-linux-gnu.so.p/meson-generated_recspeed.c.o.d -o dipy/reconst/recspeed.cpython-311-x86_64-linux-gnu.so.p/meson-generated_recspeed.c.o -c dipy/reconst/recspeed.cpython-311-x86_64-linux-gnu.so.p/recspeed.c [72/120] cc -Idipy/segment/clustering_algorithms.cpython-311-x86_64-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/segment/clustering_algorithms.cpython-311-x86_64-linux-gnu.so.p/meson-generated_clustering_algorithms.c.o -MF dipy/segment/clustering_algorithms.cpython-311-x86_64-linux-gnu.so.p/meson-generated_clustering_algorithms.c.o.d -o dipy/segment/clustering_algorithms.cpython-311-x86_64-linux-gnu.so.p/meson-generated_clustering_algorithms.c.o -c dipy/segment/clustering_algorithms.cpython-311-x86_64-linux-gnu.so.p/clustering_algorithms.c [73/120] cc -o dipy/reconst/vec_val_sum.cpython-311-x86_64-linux-gnu.so dipy/reconst/vec_val_sum.cpython-311-x86_64-linux-gnu.so.p/meson-generated_vec_val_sum.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [74/120] cc -o dipy/segment/clustering_algorithms.cpython-311-x86_64-linux-gnu.so dipy/segment/clustering_algorithms.cpython-311-x86_64-linux-gnu.so.p/meson-generated_clustering_algorithms.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [75/120] /usr/bin/cython -3 --fast-fail --output-file dipy/segment/featurespeed.cpython-311-x86_64-linux-gnu.so.p/featurespeed.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/segment/featurespeed.pyx warning: /<>/dipy/segment/featurespeed.pxd:7:71: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pxd:8:78: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pyx:39:71: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pyx:52:78: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pyx:177:79: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pyx:180:86: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pyx:207:79: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pyx:212:86: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pyx:228:83: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pyx:236:90: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pyx:263:79: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pyx:271:86: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pyx:293:80: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pyx:301:87: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pyx:318:88: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pyx:326:95: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. performance hint: /<>/dipy/segment/featurespeed.pyx:178:33: Exception check after calling '__pyx_fuse_1shape_from_memview' will always require the GIL to be acquired. Declare '__pyx_fuse_1shape_from_memview' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/featurespeed.pyx:208:45: Exception check after calling '__pyx_fuse_1shape_from_memview' will always require the GIL to be acquired. Declare '__pyx_fuse_1shape_from_memview' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/featurespeed.pyx:213:30: Exception check after calling '__pyx_fuse_0c_set_number_of_points' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0c_set_number_of_points' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0c_set_number_of_points' to allow an error code to be returned. performance hint: /<>/dipy/segment/featurespeed.pyx:229:45: Exception check after calling '__pyx_fuse_1shape_from_memview' will always require the GIL to be acquired. Declare '__pyx_fuse_1shape_from_memview' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/featurespeed.pyx:264:45: Exception check after calling '__pyx_fuse_1shape_from_memview' will always require the GIL to be acquired. Declare '__pyx_fuse_1shape_from_memview' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/featurespeed.pyx:294:45: Exception check after calling '__pyx_fuse_1shape_from_memview' will always require the GIL to be acquired. Declare '__pyx_fuse_1shape_from_memview' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/featurespeed.pyx:302:28: Exception check after calling '__pyx_fuse_0c_length' will always require the GIL to be acquired. Declare '__pyx_fuse_0c_length' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/featurespeed.pyx:319:45: Exception check after calling '__pyx_fuse_1shape_from_memview' will always require the GIL to be acquired. Declare '__pyx_fuse_1shape_from_memview' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. [76/120] cc -o dipy/reconst/recspeed.cpython-311-x86_64-linux-gnu.so dipy/reconst/recspeed.cpython-311-x86_64-linux-gnu.so.p/meson-generated_recspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [77/120] cc -Idipy/segment/cythonutils.cpython-311-x86_64-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/segment/cythonutils.cpython-311-x86_64-linux-gnu.so.p/meson-generated_cythonutils.c.o -MF dipy/segment/cythonutils.cpython-311-x86_64-linux-gnu.so.p/meson-generated_cythonutils.c.o.d -o dipy/segment/cythonutils.cpython-311-x86_64-linux-gnu.so.p/meson-generated_cythonutils.c.o -c dipy/segment/cythonutils.cpython-311-x86_64-linux-gnu.so.p/cythonutils.c [78/120] /usr/bin/cython -3 --fast-fail --output-file dipy/segment/metricspeed.cpython-311-x86_64-linux-gnu.so.p/metricspeed.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/segment/metricspeed.pyx warning: /<>/dipy/segment/metricspeed.pxd:9:87: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/metricspeed.pxd:10:86: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pxd:7:71: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pxd:8:78: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/metricspeed.pyx:48:86: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/metricspeed.pyx:53:87: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/metricspeed.pyx:230:108: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/metricspeed.pyx:246:107: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/metricspeed.pyx:282:112: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/metricspeed.pyx:320:111: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/metricspeed.pyx:341:92: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/metricspeed.pyx:344:93: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. performance hint: /<>/dipy/segment/metricspeed.pyx:247:25: Exception check after calling 'same_shape' will always require the GIL to be acquired. Declare 'same_shape' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/metricspeed.pyx:342:25: Exception check after calling 'same_shape' will always require the GIL to be acquired. Declare 'same_shape' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. [79/120] /usr/bin/cython -3 --fast-fail --output-file dipy/segment/mrf.cpython-311-x86_64-linux-gnu.so.p/mrf.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/segment/mrf.pyx performance hint: /<>/dipy/segment/mrf.pyx:239:5: Exception check on '_initialize_param_uniform' will always require the GIL to be acquired. Possible solutions: 1. Declare '_initialize_param_uniform' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_initialize_param_uniform' to allow an error code to be returned. performance hint: /<>/dipy/segment/mrf.pyx:284:5: Exception check on '_negloglikelihood' will always require the GIL to be acquired. Possible solutions: 1. Declare '_negloglikelihood' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_negloglikelihood' to allow an error code to be returned. performance hint: /<>/dipy/segment/mrf.pyx:338:5: Exception check on '_prob_image' will always require the GIL to be acquired. Possible solutions: 1. Declare '_prob_image' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_prob_image' to allow an error code to be returned. performance hint: /<>/dipy/segment/mrf.pyx:507:5: Exception check on '_initialize_maximum_likelihood' will always require the GIL to be acquired. Possible solutions: 1. Declare '_initialize_maximum_likelihood' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_initialize_maximum_likelihood' to allow an error code to be returned. performance hint: /<>/dipy/segment/mrf.pyx:551:5: Exception check on '_icm_ising' will always require the GIL to be acquired. Possible solutions: 1. Declare '_icm_ising' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_icm_ising' to allow an error code to be returned. performance hint: /<>/dipy/segment/mrf.pyx:633:5: Exception check on '_prob_class_given_neighb' will always require the GIL to be acquired. Possible solutions: 1. Declare '_prob_class_given_neighb' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_prob_class_given_neighb' to allow an error code to be returned. [80/120] cc -o dipy/segment/cythonutils.cpython-311-x86_64-linux-gnu.so dipy/segment/cythonutils.cpython-311-x86_64-linux-gnu.so.p/meson-generated_cythonutils.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [81/120] /usr/bin/cython -3 --fast-fail --output-file dipy/tracking/direction_getter.cpython-311-x86_64-linux-gnu.so.p/direction_getter.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/tracking/direction_getter.pyx performance hint: /<>/dipy/tracking/direction_getter.pyx:32:5: Exception check on '_step_to_boundary' will always require the GIL to be acquired. Possible solutions: 1. Declare '_step_to_boundary' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_step_to_boundary' to allow an error code to be returned. performance hint: /<>/dipy/tracking/direction_getter.pyx:65:5: Exception check on '_fixed_step' will always require the GIL to be acquired. Possible solutions: 1. Declare '_fixed_step' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_fixed_step' to allow an error code to be returned. [82/120] cc -Idipy/segment/clusteringspeed.cpython-311-x86_64-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/segment/clusteringspeed.cpython-311-x86_64-linux-gnu.so.p/meson-generated_clusteringspeed.c.o -MF dipy/segment/clusteringspeed.cpython-311-x86_64-linux-gnu.so.p/meson-generated_clusteringspeed.c.o.d -o dipy/segment/clusteringspeed.cpython-311-x86_64-linux-gnu.so.p/meson-generated_clusteringspeed.c.o -c dipy/segment/clusteringspeed.cpython-311-x86_64-linux-gnu.so.p/clusteringspeed.c [83/120] cc -o dipy/segment/clusteringspeed.cpython-311-x86_64-linux-gnu.so dipy/segment/clusteringspeed.cpython-311-x86_64-linux-gnu.so.p/meson-generated_clusteringspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [84/120] cc -Idipy/segment/mrf.cpython-311-x86_64-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/segment/mrf.cpython-311-x86_64-linux-gnu.so.p/meson-generated_mrf.c.o -MF dipy/segment/mrf.cpython-311-x86_64-linux-gnu.so.p/meson-generated_mrf.c.o.d -o dipy/segment/mrf.cpython-311-x86_64-linux-gnu.so.p/meson-generated_mrf.c.o -c dipy/segment/mrf.cpython-311-x86_64-linux-gnu.so.p/mrf.c [85/120] /usr/bin/cython -3 --fast-fail --output-file dipy/tracking/distances.cpython-311-x86_64-linux-gnu.so.p/distances.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/tracking/distances.pyx performance hint: /<>/dipy/tracking/distances.pyx:137:5: Exception check on 'csub_3vecs' will always require the GIL to be acquired. Possible solutions: 1. Declare 'csub_3vecs' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'csub_3vecs' to allow an error code to be returned. performance hint: /<>/dipy/tracking/distances.pyx:153:5: Exception check on 'cadd_3vecs' will always require the GIL to be acquired. Possible solutions: 1. Declare 'cadd_3vecs' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'cadd_3vecs' to allow an error code to be returned. performance hint: /<>/dipy/tracking/distances.pyx:167:5: Exception check on 'cmul_3vecs' will always require the GIL to be acquired. Possible solutions: 1. Declare 'cmul_3vecs' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'cmul_3vecs' to allow an error code to be returned. performance hint: /<>/dipy/tracking/distances.pyx:179:5: Exception check on 'cmul_3vec' will always require the GIL to be acquired. Possible solutions: 1. Declare 'cmul_3vec' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'cmul_3vec' to allow an error code to be returned. performance hint: /<>/dipy/tracking/distances.pyx:689:5: Exception check on 'min_distances' will always require the GIL to be acquired. Possible solutions: 1. Declare 'min_distances' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'min_distances' to allow an error code to be returned. performance hint: /<>/dipy/tracking/distances.pyx:1445:5: Exception check on 'track_direct_flip_dist' will always require the GIL to be acquired. Possible solutions: 1. Declare 'track_direct_flip_dist' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'track_direct_flip_dist' to allow an error code to be returned. performance hint: /<>/dipy/tracking/distances.pyx:1504:5: Exception check on 'track_direct_flip_3dist' will always require the GIL to be acquired. Possible solutions: 1. Declare 'track_direct_flip_3dist' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'track_direct_flip_3dist' to allow an error code to be returned. performance hint: /<>/dipy/tracking/distances.pyx:661:17: Exception check after calling 'min_distances' will always require the GIL to be acquired. Possible solutions: 1. Declare 'min_distances' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'min_distances' to allow an error code to be returned. performance hint: /<>/dipy/tracking/distances.pyx:1387:14: Exception check after calling 'csub_3vecs' will always require the GIL to be acquired. Possible solutions: 1. Declare 'csub_3vecs' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'csub_3vecs' to allow an error code to be returned. performance hint: /<>/dipy/tracking/distances.pyx:1388:14: Exception check after calling 'csub_3vecs' will always require the GIL to be acquired. Possible solutions: 1. Declare 'csub_3vecs' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'csub_3vecs' to allow an error code to be returned. performance hint: /<>/dipy/tracking/distances.pyx:1389:14: Exception check after calling 'csub_3vecs' will always require the GIL to be acquired. Possible solutions: 1. Declare 'csub_3vecs' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'csub_3vecs' to allow an error code to be returned. performance hint: /<>/dipy/tracking/distances.pyx:1668:38: Exception check after calling 'track_direct_flip_dist' will always require the GIL to be acquired. Possible solutions: 1. Declare 'track_direct_flip_dist' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'track_direct_flip_dist' to allow an error code to be returned. [86/120] cc -Idipy/tracking/direction_getter.cpython-311-x86_64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/tracking/direction_getter.cpython-311-x86_64-linux-gnu.so.p/meson-generated_direction_getter.c.o -MF dipy/tracking/direction_getter.cpython-311-x86_64-linux-gnu.so.p/meson-generated_direction_getter.c.o.d -o dipy/tracking/direction_getter.cpython-311-x86_64-linux-gnu.so.p/meson-generated_direction_getter.c.o -c dipy/tracking/direction_getter.cpython-311-x86_64-linux-gnu.so.p/direction_getter.c [87/120] cc -Idipy/segment/metricspeed.cpython-311-x86_64-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/segment/metricspeed.cpython-311-x86_64-linux-gnu.so.p/meson-generated_metricspeed.c.o -MF dipy/segment/metricspeed.cpython-311-x86_64-linux-gnu.so.p/meson-generated_metricspeed.c.o.d -o dipy/segment/metricspeed.cpython-311-x86_64-linux-gnu.so.p/meson-generated_metricspeed.c.o -c dipy/segment/metricspeed.cpython-311-x86_64-linux-gnu.so.p/metricspeed.c [88/120] cc -Idipy/segment/featurespeed.cpython-311-x86_64-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/segment/featurespeed.cpython-311-x86_64-linux-gnu.so.p/meson-generated_featurespeed.c.o -MF dipy/segment/featurespeed.cpython-311-x86_64-linux-gnu.so.p/meson-generated_featurespeed.c.o.d -o dipy/segment/featurespeed.cpython-311-x86_64-linux-gnu.so.p/meson-generated_featurespeed.c.o -c dipy/segment/featurespeed.cpython-311-x86_64-linux-gnu.so.p/featurespeed.c [89/120] cc -o dipy/tracking/direction_getter.cpython-311-x86_64-linux-gnu.so dipy/tracking/direction_getter.cpython-311-x86_64-linux-gnu.so.p/meson-generated_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [90/120] cc -o dipy/segment/mrf.cpython-311-x86_64-linux-gnu.so dipy/segment/mrf.cpython-311-x86_64-linux-gnu.so.p/meson-generated_mrf.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [91/120] cc -o dipy/segment/metricspeed.cpython-311-x86_64-linux-gnu.so dipy/segment/metricspeed.cpython-311-x86_64-linux-gnu.so.p/meson-generated_metricspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [92/120] /usr/bin/cython -3 --fast-fail --output-file dipy/tracking/fbcmeasures.cpython-311-x86_64-linux-gnu.so.p/fbcmeasures.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/tracking/fbcmeasures.pyx [93/120] /usr/bin/cython -3 --fast-fail --output-file dipy/tracking/localtrack.cpython-311-x86_64-linux-gnu.so.p/localtrack.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/tracking/localtrack.pyx [94/120] /usr/bin/cython -3 --fast-fail --output-file dipy/tracking/propspeed.cpython-311-x86_64-linux-gnu.so.p/propspeed.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/tracking/propspeed.pyx performance hint: /<>/dipy/tracking/propspeed.pyx:186:32: Exception check after calling '_trilinear_interpolation_iso' will always require the GIL to be acquired. Possible solutions: 1. Declare '_trilinear_interpolation_iso' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_trilinear_interpolation_iso' to allow an error code to be returned. performance hint: /<>/dipy/tracking/propspeed.pyx:199:24: Exception check after calling 'offset' will always require the GIL to be acquired. Declare 'offset' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/tracking/propspeed.pyx:251:16: Exception check after calling 'offset' will always require the GIL to be acquired. Declare 'offset' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. [95/120] cc -o dipy/segment/featurespeed.cpython-311-x86_64-linux-gnu.so dipy/segment/featurespeed.cpython-311-x86_64-linux-gnu.so.p/meson-generated_featurespeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [96/120] /usr/bin/cython -3 --fast-fail --output-file dipy/tracking/stopping_criterion.cpython-311-x86_64-linux-gnu.so.p/stopping_criterion.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/tracking/stopping_criterion.pyx [97/120] cc -Idipy/tracking/localtrack.cpython-311-x86_64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/tracking/localtrack.cpython-311-x86_64-linux-gnu.so.p/meson-generated_localtrack.c.o -MF dipy/tracking/localtrack.cpython-311-x86_64-linux-gnu.so.p/meson-generated_localtrack.c.o.d -o dipy/tracking/localtrack.cpython-311-x86_64-linux-gnu.so.p/meson-generated_localtrack.c.o -c dipy/tracking/localtrack.cpython-311-x86_64-linux-gnu.so.p/localtrack.c [98/120] cc -Idipy/tracking/propspeed.cpython-311-x86_64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/tracking/propspeed.cpython-311-x86_64-linux-gnu.so.p/meson-generated_propspeed.c.o -MF dipy/tracking/propspeed.cpython-311-x86_64-linux-gnu.so.p/meson-generated_propspeed.c.o.d -o dipy/tracking/propspeed.cpython-311-x86_64-linux-gnu.so.p/meson-generated_propspeed.c.o -c dipy/tracking/propspeed.cpython-311-x86_64-linux-gnu.so.p/propspeed.c [99/120] cc -Idipy/tracking/distances.cpython-311-x86_64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/tracking/distances.cpython-311-x86_64-linux-gnu.so.p/meson-generated_distances.c.o -MF dipy/tracking/distances.cpython-311-x86_64-linux-gnu.so.p/meson-generated_distances.c.o.d -o dipy/tracking/distances.cpython-311-x86_64-linux-gnu.so.p/meson-generated_distances.c.o -c dipy/tracking/distances.cpython-311-x86_64-linux-gnu.so.p/distances.c [100/120] cc -o dipy/tracking/localtrack.cpython-311-x86_64-linux-gnu.so dipy/tracking/localtrack.cpython-311-x86_64-linux-gnu.so.p/meson-generated_localtrack.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [101/120] cc -Idipy/tracking/fbcmeasures.cpython-311-x86_64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/tracking/fbcmeasures.cpython-311-x86_64-linux-gnu.so.p/meson-generated_fbcmeasures.c.o -MF dipy/tracking/fbcmeasures.cpython-311-x86_64-linux-gnu.so.p/meson-generated_fbcmeasures.c.o.d -o dipy/tracking/fbcmeasures.cpython-311-x86_64-linux-gnu.so.p/meson-generated_fbcmeasures.c.o -c dipy/tracking/fbcmeasures.cpython-311-x86_64-linux-gnu.so.p/fbcmeasures.c [102/120] /usr/bin/cython -3 --fast-fail --output-file dipy/tracking/streamlinespeed.cpython-311-x86_64-linux-gnu.so.p/streamlinespeed.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/tracking/streamlinespeed.pyx performance hint: /<>/dipy/tracking/streamlinespeed.pyx:33:5: Exception check on 'c_arclengths_from_arraysequence' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_arclengths_from_arraysequence' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_arclengths_from_arraysequence' to allow an error code to be returned. performance hint: /<>/dipy/tracking/streamlinespeed.pyx:182:5: Exception check on 'c_arclengths' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_arclengths' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_arclengths' to allow an error code to be returned. performance hint: /<>/dipy/tracking/streamlinespeed.pyx:196:5: Exception check on 'c_set_number_of_points' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_set_number_of_points' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_set_number_of_points' to allow an error code to be returned. performance hint: /<>/dipy/tracking/streamlinespeed.pyx:245:5: Exception check on 'c_set_number_of_points_from_arraysequence' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_set_number_of_points_from_arraysequence' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_set_number_of_points_from_arraysequence' to allow an error code to be returned. performance hint: /<>/dipy/tracking/streamlinespeed.pyx:206:16: Exception check after calling '__pyx_fuse_0c_arclengths' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0c_arclengths' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0c_arclengths' to allow an error code to be returned. performance hint: /<>/dipy/tracking/streamlinespeed.pyx:206:16: Exception check after calling '__pyx_fuse_1c_arclengths' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1c_arclengths' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1c_arclengths' to allow an error code to be returned. performance hint: /<>/dipy/tracking/streamlinespeed.pyx:260:30: Exception check after calling '__pyx_fuse_0c_set_number_of_points' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0c_set_number_of_points' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0c_set_number_of_points' to allow an error code to be returned. performance hint: /<>/dipy/tracking/streamlinespeed.pyx:260:30: Exception check after calling '__pyx_fuse_1c_set_number_of_points' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1c_set_number_of_points' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1c_set_number_of_points' to allow an error code to be returned. [103/120] cc -o dipy/tracking/propspeed.cpython-311-x86_64-linux-gnu.so dipy/tracking/propspeed.cpython-311-x86_64-linux-gnu.so.p/meson-generated_propspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [104/120] cc -Idipy/align/vector_fields.cpython-311-x86_64-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/align/vector_fields.cpython-311-x86_64-linux-gnu.so.p/meson-generated_vector_fields.c.o -MF dipy/align/vector_fields.cpython-311-x86_64-linux-gnu.so.p/meson-generated_vector_fields.c.o.d -o dipy/align/vector_fields.cpython-311-x86_64-linux-gnu.so.p/meson-generated_vector_fields.c.o -c dipy/align/vector_fields.cpython-311-x86_64-linux-gnu.so.p/vector_fields.c [105/120] cc -o dipy/tracking/distances.cpython-311-x86_64-linux-gnu.so dipy/tracking/distances.cpython-311-x86_64-linux-gnu.so.p/meson-generated_distances.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [106/120] /usr/bin/cython -3 --fast-fail --output-file dipy/tracking/vox2track.cpython-311-x86_64-linux-gnu.so.p/vox2track.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/tracking/vox2track.pyx performance hint: /<>/dipy/tracking/vox2track.pyx:171:5: Exception check on 'c_get_closest_edge' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_get_closest_edge' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_get_closest_edge' to allow an error code to be returned. performance hint: /<>/dipy/tracking/vox2track.pyx:275:30: Exception check after calling 'c_get_closest_edge' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_get_closest_edge' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_get_closest_edge' to allow an error code to be returned. performance hint: /<>/dipy/tracking/vox2track.pyx:314:30: Exception check after calling 'c_get_closest_edge' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_get_closest_edge' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_get_closest_edge' to allow an error code to be returned. [107/120] /usr/bin/cython -3 --fast-fail --output-file dipy/utils/fast_numpy.cpython-311-x86_64-linux-gnu.so.p/fast_numpy.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/utils/fast_numpy.pyx performance hint: /<>/dipy/utils/fast_numpy.pyx:17:5: Exception check on 'cumsum' will always require the GIL to be acquired. Possible solutions: 1. Declare 'cumsum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'cumsum' to allow an error code to be returned. performance hint: /<>/dipy/utils/fast_numpy.pyx:26:5: Exception check on 'copy_point' will always require the GIL to be acquired. Possible solutions: 1. Declare 'copy_point' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'copy_point' to allow an error code to be returned. performance hint: /<>/dipy/utils/fast_numpy.pyx:33:5: Exception check on 'scalar_muliplication_point' will always require the GIL to be acquired. Possible solutions: 1. Declare 'scalar_muliplication_point' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'scalar_muliplication_point' to allow an error code to be returned. performance hint: /<>/dipy/utils/fast_numpy.pyx:70:5: Exception check on 'normalize' will always require the GIL to be acquired. Possible solutions: 1. Declare 'normalize' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'normalize' to allow an error code to be returned. performance hint: /<>/dipy/utils/fast_numpy.pyx:89:5: Exception check on 'cross' will always require the GIL to be acquired. Possible solutions: 1. Declare 'cross' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'cross' to allow an error code to be returned. performance hint: /<>/dipy/utils/fast_numpy.pyx:111:5: Exception check on 'random_vector' will always require the GIL to be acquired. Possible solutions: 1. Declare 'random_vector' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'random_vector' to allow an error code to be returned. performance hint: /<>/dipy/utils/fast_numpy.pyx:129:5: Exception check on 'random_perpendicular_vector' will always require the GIL to be acquired. Possible solutions: 1. Declare 'random_perpendicular_vector' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'random_perpendicular_vector' to allow an error code to be returned. performance hint: /<>/dipy/utils/fast_numpy.pyx:151:6: Exception check on 'random_point_within_circle' will always require the GIL to be acquired. Declare 'random_point_within_circle' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/utils/fast_numpy.pyx:188:6: Exception check on 'seed' will always require the GIL to be acquired. Possible solutions: 1. Declare 'seed' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'seed' to allow an error code to be returned. performance hint: /<>/dipy/utils/fast_numpy.pyx:126:13: Exception check after calling 'normalize' will always require the GIL to be acquired. Possible solutions: 1. Declare 'normalize' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'normalize' to allow an error code to be returned. performance hint: /<>/dipy/utils/fast_numpy.pyx:146:17: Exception check after calling 'random_vector' will always require the GIL to be acquired. Possible solutions: 1. Declare 'random_vector' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'random_vector' to allow an error code to be returned. performance hint: /<>/dipy/utils/fast_numpy.pyx:147:9: Exception check after calling 'cross' will always require the GIL to be acquired. Possible solutions: 1. Declare 'cross' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'cross' to allow an error code to be returned. performance hint: /<>/dipy/utils/fast_numpy.pyx:148:13: Exception check after calling 'normalize' will always require the GIL to be acquired. Possible solutions: 1. Declare 'normalize' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'normalize' to allow an error code to be returned. [108/120] cc -o dipy/tracking/fbcmeasures.cpython-311-x86_64-linux-gnu.so dipy/tracking/fbcmeasures.cpython-311-x86_64-linux-gnu.so.p/meson-generated_fbcmeasures.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [109/120] cc -Idipy/tracking/stopping_criterion.cpython-311-x86_64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/tracking/stopping_criterion.cpython-311-x86_64-linux-gnu.so.p/meson-generated_stopping_criterion.c.o -MF dipy/tracking/stopping_criterion.cpython-311-x86_64-linux-gnu.so.p/meson-generated_stopping_criterion.c.o.d -o dipy/tracking/stopping_criterion.cpython-311-x86_64-linux-gnu.so.p/meson-generated_stopping_criterion.c.o -c dipy/tracking/stopping_criterion.cpython-311-x86_64-linux-gnu.so.p/stopping_criterion.c In file included from /usr/include/string.h:548, from /usr/include/python3.11/Python.h:26, from dipy/tracking/stopping_criterion.cpython-311-x86_64-linux-gnu.so.p/stopping_criterion.c:16: In function ‘memcpy’, inlined from ‘__pyx_f_4dipy_8tracking_18stopping_criterion___pyx_unpickle_StoppingCriterion__set_state’ at dipy/tracking/stopping_criterion.cpython-311-x86_64-linux-gnu.so.p/stopping_criterion.c:29845:3: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:29:10: warning: ‘MEM [(char * {ref-all})&__pyx_t_1]’ may be used uninitialized [-Wmaybe-uninitialized] 29 | return __builtin___memcpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 30 | __glibc_objsize0 (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ dipy/tracking/stopping_criterion.cpython-311-x86_64-linux-gnu.so.p/stopping_criterion.c: In function ‘__pyx_f_4dipy_8tracking_18stopping_criterion___pyx_unpickle_StoppingCriterion__set_state’: dipy/tracking/stopping_criterion.cpython-311-x86_64-linux-gnu.so.p/stopping_criterion.c:29819:10: note: ‘MEM [(char * {ref-all})&__pyx_t_1]’ was declared here 29819 | double __pyx_t_1[1]; | ^~~~~~~~~ [110/120] /usr/bin/cython -3 --fast-fail --output-file dipy/utils/omp.cpython-311-x86_64-linux-gnu.so.p/omp.c --include-dir /<>/.mesonpy-e9nekpua/dipy ../dipy/utils/omp.pyx [111/120] cc -Idipy/utils/fast_numpy.cpython-311-x86_64-linux-gnu.so.p -Idipy/utils -I../dipy/utils -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/utils/fast_numpy.cpython-311-x86_64-linux-gnu.so.p/meson-generated_fast_numpy.c.o -MF dipy/utils/fast_numpy.cpython-311-x86_64-linux-gnu.so.p/meson-generated_fast_numpy.c.o.d -o dipy/utils/fast_numpy.cpython-311-x86_64-linux-gnu.so.p/meson-generated_fast_numpy.c.o -c dipy/utils/fast_numpy.cpython-311-x86_64-linux-gnu.so.p/fast_numpy.c [112/120] cc -o dipy/utils/fast_numpy.cpython-311-x86_64-linux-gnu.so dipy/utils/fast_numpy.cpython-311-x86_64-linux-gnu.so.p/meson-generated_fast_numpy.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [113/120] cc -Idipy/utils/omp.cpython-311-x86_64-linux-gnu.so.p -Idipy/utils -I../dipy/utils -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/utils/omp.cpython-311-x86_64-linux-gnu.so.p/meson-generated_omp.c.o -MF dipy/utils/omp.cpython-311-x86_64-linux-gnu.so.p/meson-generated_omp.c.o.d -o dipy/utils/omp.cpython-311-x86_64-linux-gnu.so.p/meson-generated_omp.c.o -c dipy/utils/omp.cpython-311-x86_64-linux-gnu.so.p/omp.c [114/120] cc -o dipy/tracking/stopping_criterion.cpython-311-x86_64-linux-gnu.so dipy/tracking/stopping_criterion.cpython-311-x86_64-linux-gnu.so.p/meson-generated_stopping_criterion.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [115/120] cc -o dipy/utils/omp.cpython-311-x86_64-linux-gnu.so dipy/utils/omp.cpython-311-x86_64-linux-gnu.so.p/meson-generated_omp.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [116/120] cc -Idipy/tracking/streamlinespeed.cpython-311-x86_64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/tracking/streamlinespeed.cpython-311-x86_64-linux-gnu.so.p/meson-generated_streamlinespeed.c.o -MF dipy/tracking/streamlinespeed.cpython-311-x86_64-linux-gnu.so.p/meson-generated_streamlinespeed.c.o.d -o dipy/tracking/streamlinespeed.cpython-311-x86_64-linux-gnu.so.p/meson-generated_streamlinespeed.c.o -c dipy/tracking/streamlinespeed.cpython-311-x86_64-linux-gnu.so.p/streamlinespeed.c [117/120] cc -Idipy/tracking/vox2track.cpython-311-x86_64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/tracking/vox2track.cpython-311-x86_64-linux-gnu.so.p/meson-generated_vox2track.c.o -MF dipy/tracking/vox2track.cpython-311-x86_64-linux-gnu.so.p/meson-generated_vox2track.c.o.d -o dipy/tracking/vox2track.cpython-311-x86_64-linux-gnu.so.p/meson-generated_vox2track.c.o -c dipy/tracking/vox2track.cpython-311-x86_64-linux-gnu.so.p/vox2track.c [118/120] cc -o dipy/tracking/streamlinespeed.cpython-311-x86_64-linux-gnu.so dipy/tracking/streamlinespeed.cpython-311-x86_64-linux-gnu.so.p/meson-generated_streamlinespeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [119/120] cc -o dipy/tracking/vox2track.cpython-311-x86_64-linux-gnu.so dipy/tracking/vox2track.cpython-311-x86_64-linux-gnu.so.p/meson-generated_vox2track.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [120/120] cc -o dipy/align/vector_fields.cpython-311-x86_64-linux-gnu.so dipy/align/vector_fields.cpython-311-x86_64-linux-gnu.so.p/meson-generated_vector_fields.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [1/517] /<>/.mesonpy-e9nekpua/dipy/version.py [2/517] /<>/.mesonpy-e9nekpua/dipy/align/bundlemin.cpython-311-x86_64-linux-gnu.so [3/517] /<>/.mesonpy-e9nekpua/dipy/align/crosscorr.cpython-311-x86_64-linux-gnu.so [4/517] /<>/.mesonpy-e9nekpua/dipy/align/expectmax.cpython-311-x86_64-linux-gnu.so [5/517] /<>/.mesonpy-e9nekpua/dipy/align/parzenhist.cpython-311-x86_64-linux-gnu.so [6/517] /<>/.mesonpy-e9nekpua/dipy/align/sumsqdiff.cpython-311-x86_64-linux-gnu.so [7/517] /<>/.mesonpy-e9nekpua/dipy/align/transforms.cpython-311-x86_64-linux-gnu.so [8/517] /<>/.mesonpy-e9nekpua/dipy/align/vector_fields.cpython-311-x86_64-linux-gnu.so [9/517] /<>/.mesonpy-e9nekpua/dipy/core/interpolation.cpython-311-x86_64-linux-gnu.so [10/517] /<>/.mesonpy-e9nekpua/dipy/denoise/denspeed.cpython-311-x86_64-linux-gnu.so [11/517] /<>/.mesonpy-e9nekpua/dipy/denoise/enhancement_kernel.cpython-311-x86_64-linux-gnu.so [12/517] /<>/.mesonpy-e9nekpua/dipy/denoise/nlmeans_block.cpython-311-x86_64-linux-gnu.so [13/517] /<>/.mesonpy-e9nekpua/dipy/denoise/pca_noise_estimate.cpython-311-x86_64-linux-gnu.so [14/517] /<>/.mesonpy-e9nekpua/dipy/denoise/shift_twist_convolution.cpython-311-x86_64-linux-gnu.so [15/517] /<>/.mesonpy-e9nekpua/dipy/direction/bootstrap_direction_getter.cpython-311-x86_64-linux-gnu.so [16/517] /<>/.mesonpy-e9nekpua/dipy/direction/closest_peak_direction_getter.cpython-311-x86_64-linux-gnu.so [17/517] /<>/.mesonpy-e9nekpua/dipy/direction/pmf.cpython-311-x86_64-linux-gnu.so [18/517] /<>/.mesonpy-e9nekpua/dipy/direction/probabilistic_direction_getter.cpython-311-x86_64-linux-gnu.so [19/517] /<>/.mesonpy-e9nekpua/dipy/direction/ptt_direction_getter.cpython-311-x86_64-linux-gnu.so [20/517] /<>/.mesonpy-e9nekpua/dipy/reconst/eudx_direction_getter.cpython-311-x86_64-linux-gnu.so [21/517] /<>/.mesonpy-e9nekpua/dipy/reconst/quick_squash.cpython-311-x86_64-linux-gnu.so [22/517] /<>/.mesonpy-e9nekpua/dipy/reconst/recspeed.cpython-311-x86_64-linux-gnu.so [23/517] /<>/.mesonpy-e9nekpua/dipy/reconst/vec_val_sum.cpython-311-x86_64-linux-gnu.so [24/517] /<>/.mesonpy-e9nekpua/dipy/segment/clustering_algorithms.cpython-311-x86_64-linux-gnu.so [25/517] /<>/.mesonpy-e9nekpua/dipy/segment/clusteringspeed.cpython-311-x86_64-linux-gnu.so [26/517] /<>/.mesonpy-e9nekpua/dipy/segment/cythonutils.cpython-311-x86_64-linux-gnu.so [27/517] /<>/.mesonpy-e9nekpua/dipy/segment/featurespeed.cpython-311-x86_64-linux-gnu.so [28/517] /<>/.mesonpy-e9nekpua/dipy/segment/metricspeed.cpython-311-x86_64-linux-gnu.so [29/517] /<>/.mesonpy-e9nekpua/dipy/segment/mrf.cpython-311-x86_64-linux-gnu.so [30/517] /<>/.mesonpy-e9nekpua/dipy/tracking/direction_getter.cpython-311-x86_64-linux-gnu.so [31/517] 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/<>/dipy/data/files/small_101D.bvec [156/517] /<>/dipy/data/files/small_101D.nii.gz [157/517] /<>/dipy/data/files/sphere_grad.txt [158/517] /<>/dipy/data/files/t1_coronal_slice.npy [159/517] /<>/dipy/data/files/tdesign45.txt [160/517] /<>/dipy/data/files/test_piesno.nii.gz [161/517] /<>/dipy/data/files/test_ui_text_block.npz [162/517] /<>/dipy/data/files/tracks300.trk [163/517] /<>/dipy/data/tests/__init__.py [164/517] /<>/dipy/data/tests/test_data.py [165/517] /<>/dipy/data/tests/test_fetcher.py [166/517] /<>/dipy/denoise/__init__.py [167/517] /<>/dipy/denoise/adaptive_soft_matching.py [168/517] /<>/dipy/denoise/gibbs.py [169/517] /<>/dipy/denoise/localpca.py [170/517] /<>/dipy/denoise/nlmeans.py [171/517] /<>/dipy/denoise/noise_estimate.py [172/517] /<>/dipy/denoise/non_local_means.py [173/517] /<>/dipy/denoise/patch2self.py [174/517] /<>/dipy/denoise/tests/__init__.py [175/517] /<>/dipy/denoise/tests/test_ascm.py [176/517] /<>/dipy/denoise/tests/test_denoise.py [177/517] 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/<>/dipy/../doc/examples/viz_roi_contour.py [516/517] /<>/dipy/../doc/examples/viz_slice.py [517/517] /<>/dipy/../doc/examples/workflow_creation.py Successfully built dipy-1.8.0-cp311-cp311-linux_x86_64.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.11 with "installer" module I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" module I: pybuild base:305: python3.12 -m build --skip-dependency-check --no-isolation --wheel --outdir /<>/.pybuild/cpython3_3.12_dipy --config-setting compile-args=--verbose --config-setting setup-args=--wrap-mode=nodownload --config-setting setup-args=--prefix=/usr --config-setting setup-args=--sysconfdir=/etc --config-setting setup-args=--localstatedir=/var --config-setting setup-args=--libdir=lib/x86_64-linux-gnu * Building wheel... + meson setup /<> /<>/.mesonpy-pgiu6tei -Dbuildtype=release -Db_ndebug=if-release -Db_vscrt=md --wrap-mode=nodownload --prefix=/usr --sysconfdir=/etc --localstatedir=/var --libdir=lib/x86_64-linux-gnu --native-file=/<>/.mesonpy-pgiu6tei/meson-python-native-file.ini The Meson build system Version: 1.3.1 Source dir: /<> Build dir: /<>/.mesonpy-pgiu6tei Build type: native build Project name: dipy Project version: 1.8.0 C compiler for the host machine: cc (gcc 13.2.0 "cc (Ubuntu 13.2.0-13ubuntu1) 13.2.0") C linker for the host machine: cc ld.bfd 2.42 C++ compiler for the host machine: c++ (gcc 13.2.0 "c++ (Ubuntu 13.2.0-13ubuntu1) 13.2.0") C++ linker for the host machine: c++ ld.bfd 2.42 Cython compiler for the host machine: cython (cython 3.0.8) Host machine cpu family: x86_64 Host machine cpu: x86_64 Program python found: YES (/usr/bin/python3.12) Did not find pkg-config by name 'pkg-config' Found pkg-config: NO Run-time dependency python found: YES 3.12 Program cython found: YES (/usr/bin/cython) Library m found: YES Compiler for C supports arguments -Wno-maybe-uninitialized: YES Compiler for C supports arguments -Wno-discarded-qualifiers: YES Compiler for C supports arguments -Wno-empty-body: YES Compiler for C supports arguments -Wno-implicit-function-declaration: YES Compiler for C supports arguments -Wno-parentheses: YES Compiler for C supports arguments -Wno-switch: YES Compiler for C supports arguments -Wno-unused-label: YES Compiler for C supports arguments -Wno-unused-variable: YES Compiler for C++ supports arguments -Wno-cpp: YES Compiler for C++ supports arguments -Wno-deprecated-declarations: YES Compiler for C++ supports arguments -Wno-class-memaccess: YES Compiler for C++ supports arguments -Wno-format-truncation: YES Compiler for C++ supports arguments -Wno-format-extra-args: YES Compiler for C++ supports arguments -Wno-format: NO Compiler for C++ supports arguments -Wno-non-virtual-dtor: YES Compiler for C++ supports arguments -Wno-sign-compare: YES Compiler for C++ supports arguments -Wno-switch: YES Compiler for C++ supports arguments -Wno-terminate: YES Compiler for C++ supports arguments -Wno-unused-but-set-variable: YES Compiler for C++ supports arguments -Wno-unused-function: YES Compiler for C++ supports arguments -Wno-unused-local-typedefs: YES Compiler for C++ supports arguments -Wno-unused-variable: YES Compiler for C++ supports arguments -Wno-int-in-bool-context: YES Run-time dependency OpenMP found: YES 4.5 Checking if "SSE intrinsics" compiles: YES Checking if "compiler supports SSE4.1 intrinsics" : links: NO Checking if "compiler supports AVX intrinsics" : links: NO Checking if "ARM NEON intrinsics" compiles: NO Build targets in project: 44 dipy 1.8.0 User defined options Native files : /<>/.mesonpy-pgiu6tei/meson-python-native-file.ini buildtype : release libdir : lib/x86_64-linux-gnu localstatedir: /var prefix : /usr sysconfdir : /etc wrap_mode : nodownload b_ndebug : if-release b_vscrt : md Found ninja-1.11.1 at /usr/bin/ninja Generating targets: 0%| | 0/44 eta ? Writing build.ninja: 0%| | 0/184 eta ? + /usr/bin/ninja --verbose [1/120] /usr/bin/meson --internal copy ../dipy/../src/safe_openmp.pxd dipy/safe_openmp.pxd [2/120] /usr/bin/meson --internal copy ../dipy/../src/dpy_math.h dipy/dpy_math.h [3/120] /usr/bin/python3.12 ../dipy/../tools/version_utils.py --source-root .. [4/120] /usr/bin/meson --internal copy ../dipy/../src/conditional_omp.h dipy/conditional_omp.h [5/120] /usr/bin/meson --internal copy ../dipy/__init__.py dipy/__init__.py [6/120] /usr/bin/meson --internal copy ../dipy/../src/cythonutils.h dipy/cythonutils.h [7/120] /usr/bin/cython -3 --fast-fail --output-file dipy/align/bundlemin.cpython-312-x86_64-linux-gnu.so.p/bundlemin.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/align/bundlemin.pyx [8/120] /usr/bin/cython -3 --fast-fail --output-file dipy/align/parzenhist.cpython-312-x86_64-linux-gnu.so.p/parzenhist.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/align/parzenhist.pyx performance hint: /<>/dipy/align/parzenhist.pyx:923:59: Exception check after calling '_jacobian' will always require the GIL to be acquired. Declare '_jacobian' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/parzenhist.pyx:923:59: Exception check after calling '_jacobian' will always require the GIL to be acquired. Declare '_jacobian' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/parzenhist.pyx:1035:63: Exception check after calling '_jacobian' will always require the GIL to be acquired. Declare '_jacobian' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/parzenhist.pyx:1035:63: Exception check after calling '_jacobian' will always require the GIL to be acquired. Declare '_jacobian' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/parzenhist.pyx:1125:55: Exception check after calling '_jacobian' will always require the GIL to be acquired. Declare '_jacobian' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/parzenhist.pyx:1125:55: Exception check after calling '_jacobian' will always require the GIL to be acquired. Declare '_jacobian' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/parzenhist.pyx:1216:55: Exception check after calling '_jacobian' will always require the GIL to be acquired. Declare '_jacobian' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/parzenhist.pyx:1216:55: Exception check after calling '_jacobian' will always require the GIL to be acquired. Declare '_jacobian' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. [9/120] /usr/bin/cython -3 --fast-fail --output-file dipy/align/expectmax.cpython-312-x86_64-linux-gnu.so.p/expectmax.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/align/expectmax.pyx [10/120] /usr/bin/cython -3 --fast-fail --output-file dipy/align/sumsqdiff.cpython-312-x86_64-linux-gnu.so.p/sumsqdiff.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/align/sumsqdiff.pyx performance hint: /<>/dipy/align/sumsqdiff.pyx:15:5: Exception check on '_solve_2d_symmetric_positive_definite' will always require the GIL to be acquired. Possible solutions: 1. Declare '_solve_2d_symmetric_positive_definite' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_solve_2d_symmetric_positive_definite' to allow an error code to be returned. performance hint: /<>/dipy/align/sumsqdiff.pyx:274:61: Exception check after calling '_solve_2d_symmetric_positive_definite' will always require the GIL to be acquired. Possible solutions: 1. Declare '_solve_2d_symmetric_positive_definite' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_solve_2d_symmetric_positive_definite' to allow an error code to be returned. performance hint: /<>/dipy/align/sumsqdiff.pyx:274:61: Exception check after calling '_solve_2d_symmetric_positive_definite' will always require the GIL to be acquired. Possible solutions: 1. Declare '_solve_2d_symmetric_positive_definite' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_solve_2d_symmetric_positive_definite' to allow an error code to be returned. [11/120] /usr/bin/cython -3 --fast-fail --output-file dipy/align/transforms.cpython-312-x86_64-linux-gnu.so.p/transforms.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/align/transforms.pyx [12/120] /usr/bin/cython -3 --fast-fail --output-file dipy/align/crosscorr.cpython-312-x86_64-linux-gnu.so.p/crosscorr.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/align/crosscorr.pyx performance hint: /<>/dipy/align/crosscorr.pyx:56:5: Exception check on '_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_update_factors' to allow an error code to be returned. performance hint: /<>/dipy/align/crosscorr.pyx:204:35: Exception check after calling '__pyx_fuse_0_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_update_factors' to allow an error code to be returned. performance hint: /<>/dipy/align/crosscorr.pyx:244:39: Exception check after calling '__pyx_fuse_0_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_update_factors' to allow an error code to be returned. performance hint: /<>/dipy/align/crosscorr.pyx:247:43: Exception check after calling '__pyx_fuse_0_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_update_factors' to allow an error code to be returned. performance hint: /<>/dipy/align/crosscorr.pyx:250:47: Exception check after calling '__pyx_fuse_0_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_update_factors' to allow an error code to be returned. performance hint: /<>/dipy/align/crosscorr.pyx:253:43: Exception check after calling '__pyx_fuse_0_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_update_factors' to allow an error code to be returned. performance hint: /<>/dipy/align/crosscorr.pyx:256:39: Exception check after calling '__pyx_fuse_0_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_update_factors' to allow an error code to be returned. performance hint: /<>/dipy/align/crosscorr.pyx:259:43: Exception check after calling '__pyx_fuse_0_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_update_factors' to allow an error code to be returned. performance hint: /<>/dipy/align/crosscorr.pyx:263:39: Exception check after calling '__pyx_fuse_0_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_update_factors' to allow an error code to be returned. performance hint: /<>/dipy/align/crosscorr.pyx:204:35: Exception check after calling '__pyx_fuse_1_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_update_factors' to allow an error code to be returned. performance hint: /<>/dipy/align/crosscorr.pyx:244:39: Exception check after calling '__pyx_fuse_1_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_update_factors' to allow an error code to be returned. performance hint: /<>/dipy/align/crosscorr.pyx:247:43: Exception check after calling '__pyx_fuse_1_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_update_factors' to allow an error code to be returned. performance hint: /<>/dipy/align/crosscorr.pyx:250:47: Exception check after calling '__pyx_fuse_1_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_update_factors' to allow an error code to be returned. performance hint: /<>/dipy/align/crosscorr.pyx:253:43: Exception check after calling '__pyx_fuse_1_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_update_factors' to allow an error code to be returned. performance hint: /<>/dipy/align/crosscorr.pyx:256:39: Exception check after calling '__pyx_fuse_1_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_update_factors' to allow an error code to be returned. performance hint: /<>/dipy/align/crosscorr.pyx:259:43: Exception check after calling '__pyx_fuse_1_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_update_factors' to allow an error code to be returned. performance hint: /<>/dipy/align/crosscorr.pyx:263:39: Exception check after calling '__pyx_fuse_1_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_update_factors' to allow an error code to be returned. [13/120] cc -Idipy/align/bundlemin.cpython-312-x86_64-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/align/bundlemin.cpython-312-x86_64-linux-gnu.so.p/meson-generated_bundlemin.c.o -MF dipy/align/bundlemin.cpython-312-x86_64-linux-gnu.so.p/meson-generated_bundlemin.c.o.d -o dipy/align/bundlemin.cpython-312-x86_64-linux-gnu.so.p/meson-generated_bundlemin.c.o -c dipy/align/bundlemin.cpython-312-x86_64-linux-gnu.so.p/bundlemin.c [14/120] cc -o dipy/align/bundlemin.cpython-312-x86_64-linux-gnu.so dipy/align/bundlemin.cpython-312-x86_64-linux-gnu.so.p/meson-generated_bundlemin.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [15/120] cc -Idipy/align/transforms.cpython-312-x86_64-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/align/transforms.cpython-312-x86_64-linux-gnu.so.p/meson-generated_transforms.c.o -MF dipy/align/transforms.cpython-312-x86_64-linux-gnu.so.p/meson-generated_transforms.c.o.d -o dipy/align/transforms.cpython-312-x86_64-linux-gnu.so.p/meson-generated_transforms.c.o -c dipy/align/transforms.cpython-312-x86_64-linux-gnu.so.p/transforms.c [16/120] cc -o dipy/align/transforms.cpython-312-x86_64-linux-gnu.so dipy/align/transforms.cpython-312-x86_64-linux-gnu.so.p/meson-generated_transforms.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [17/120] cc -Idipy/align/parzenhist.cpython-312-x86_64-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/align/parzenhist.cpython-312-x86_64-linux-gnu.so.p/meson-generated_parzenhist.c.o -MF dipy/align/parzenhist.cpython-312-x86_64-linux-gnu.so.p/meson-generated_parzenhist.c.o.d -o dipy/align/parzenhist.cpython-312-x86_64-linux-gnu.so.p/meson-generated_parzenhist.c.o -c dipy/align/parzenhist.cpython-312-x86_64-linux-gnu.so.p/parzenhist.c [18/120] cc -Idipy/align/expectmax.cpython-312-x86_64-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/align/expectmax.cpython-312-x86_64-linux-gnu.so.p/meson-generated_expectmax.c.o -MF dipy/align/expectmax.cpython-312-x86_64-linux-gnu.so.p/meson-generated_expectmax.c.o.d -o dipy/align/expectmax.cpython-312-x86_64-linux-gnu.so.p/meson-generated_expectmax.c.o -c dipy/align/expectmax.cpython-312-x86_64-linux-gnu.so.p/expectmax.c [19/120] /usr/bin/cython -3 --fast-fail --output-file dipy/core/interpolation.cpython-312-x86_64-linux-gnu.so.p/interpolation.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/core/interpolation.pyx performance hint: /<>/dipy/core/interpolation.pyx:117:5: Exception check on 'splitoffset' will always require the GIL to be acquired. Possible solutions: 1. Declare 'splitoffset' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'splitoffset' to allow an error code to be returned. performance hint: /<>/dipy/core/interpolation.pyx:245:5: Exception check on '_trilinear_interpolation_iso' will always require the GIL to be acquired. Possible solutions: 1. Declare '_trilinear_interpolation_iso' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_trilinear_interpolation_iso' to allow an error code to be returned. performance hint: /<>/dipy/core/interpolation.pyx:233:40: Exception check after calling '_trilinear_interpolation_iso' will always require the GIL to be acquired. Possible solutions: 1. Declare '_trilinear_interpolation_iso' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_trilinear_interpolation_iso' to allow an error code to be returned. [20/120] /usr/bin/cython -3 --fast-fail --output-file dipy/align/vector_fields.cpython-312-x86_64-linux-gnu.so.p/vector_fields.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/align/vector_fields.pyx performance hint: /<>/dipy/align/vector_fields.pyx:35:5: Exception check on '_compose_vector_fields_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '_compose_vector_fields_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_compose_vector_fields_2d' to allow an error code to be returned. performance hint: /<>/dipy/align/vector_fields.pyx:234:5: Exception check on '_compose_vector_fields_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '_compose_vector_fields_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_compose_vector_fields_3d' to allow an error code to be returned. performance hint: /<>/dipy/align/vector_fields.pyx:144:53: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:144:53: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:351:57: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:351:57: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:525:47: Exception check after calling '__pyx_fuse_0_compose_vector_fields_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_compose_vector_fields_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_compose_vector_fields_2d' to allow an error code to be returned. performance hint: /<>/dipy/align/vector_fields.pyx:525:47: Exception check after calling '__pyx_fuse_1_compose_vector_fields_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_compose_vector_fields_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_compose_vector_fields_2d' to allow an error code to be returned. performance hint: /<>/dipy/align/vector_fields.pyx:631:47: Exception check after calling '__pyx_fuse_0_compose_vector_fields_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_compose_vector_fields_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_compose_vector_fields_3d' to allow an error code to be returned. performance hint: /<>/dipy/align/vector_fields.pyx:631:47: Exception check after calling '__pyx_fuse_1_compose_vector_fields_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_compose_vector_fields_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_compose_vector_fields_3d' to allow an error code to be returned. performance hint: /<>/dipy/align/vector_fields.pyx:760:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:760:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:886:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:886:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1238:53: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1238:53: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1308:53: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1308:53: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1422:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1452:61: Exception check after calling '__pyx_fuse_0_interpolate_scalar_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1422:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1452:61: Exception check after calling '__pyx_fuse_1_interpolate_scalar_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1519:61: Exception check after calling '__pyx_fuse_0_interpolate_scalar_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1519:61: Exception check after calling '__pyx_fuse_1_interpolate_scalar_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_0_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_0_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_1_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_1_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_2_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_2_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_2_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_2_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_3_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_3_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_3_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_3_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_4_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_4_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_4_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_4_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_5_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_5_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_5_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_5_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_6_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_6_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_6_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_6_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1717:53: Exception check after calling '__pyx_fuse_0_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1717:53: Exception check after calling '__pyx_fuse_1_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1717:53: Exception check after calling '__pyx_fuse_2_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_2_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1717:53: Exception check after calling '__pyx_fuse_3_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_3_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1717:53: Exception check after calling '__pyx_fuse_4_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_4_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1717:53: Exception check after calling '__pyx_fuse_5_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_5_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1717:53: Exception check after calling '__pyx_fuse_6_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_6_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1811:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1834:48: Exception check after calling '__pyx_fuse_0_interpolate_scalar_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1811:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1834:48: Exception check after calling '__pyx_fuse_1_interpolate_scalar_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1894:48: Exception check after calling '__pyx_fuse_0_interpolate_scalar_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1894:48: Exception check after calling '__pyx_fuse_1_interpolate_scalar_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_0_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_0_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_1_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_1_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_2_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_2_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_2_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_2_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_3_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_3_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_3_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_3_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_4_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_4_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_4_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_4_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_5_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_5_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_5_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_5_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_6_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_6_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_6_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_6_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2071:49: Exception check after calling '__pyx_fuse_0_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2071:49: Exception check after calling '__pyx_fuse_1_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2071:49: Exception check after calling '__pyx_fuse_2_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_2_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2071:49: Exception check after calling '__pyx_fuse_3_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_3_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2071:49: Exception check after calling '__pyx_fuse_4_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_4_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2071:49: Exception check after calling '__pyx_fuse_5_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_5_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2071:49: Exception check after calling '__pyx_fuse_6_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_6_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2607:66: Exception check after calling '__pyx_fuse_0_interpolate_scalar_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2623:66: Exception check after calling '__pyx_fuse_0_interpolate_scalar_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2607:66: Exception check after calling '__pyx_fuse_1_interpolate_scalar_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2623:66: Exception check after calling '__pyx_fuse_1_interpolate_scalar_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2693:58: Exception check after calling '__pyx_fuse_0_interpolate_scalar_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2709:58: Exception check after calling '__pyx_fuse_0_interpolate_scalar_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2693:58: Exception check after calling '__pyx_fuse_1_interpolate_scalar_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2709:58: Exception check after calling '__pyx_fuse_1_interpolate_scalar_3d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2780:62: Exception check after calling '__pyx_fuse_0_interpolate_scalar_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2792:62: Exception check after calling '__pyx_fuse_0_interpolate_scalar_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2780:62: Exception check after calling '__pyx_fuse_1_interpolate_scalar_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2792:62: Exception check after calling '__pyx_fuse_1_interpolate_scalar_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2856:58: Exception check after calling '__pyx_fuse_0_interpolate_scalar_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2868:58: Exception check after calling '__pyx_fuse_0_interpolate_scalar_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_0_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2856:58: Exception check after calling '__pyx_fuse_1_interpolate_scalar_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/align/vector_fields.pyx:2868:58: Exception check after calling '__pyx_fuse_1_interpolate_scalar_2d' will always require the GIL to be acquired. Declare '__pyx_fuse_1_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. [21/120] cc -Idipy/align/sumsqdiff.cpython-312-x86_64-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/align/sumsqdiff.cpython-312-x86_64-linux-gnu.so.p/meson-generated_sumsqdiff.c.o -MF dipy/align/sumsqdiff.cpython-312-x86_64-linux-gnu.so.p/meson-generated_sumsqdiff.c.o.d -o dipy/align/sumsqdiff.cpython-312-x86_64-linux-gnu.so.p/meson-generated_sumsqdiff.c.o -c dipy/align/sumsqdiff.cpython-312-x86_64-linux-gnu.so.p/sumsqdiff.c [22/120] cc -o dipy/align/parzenhist.cpython-312-x86_64-linux-gnu.so dipy/align/parzenhist.cpython-312-x86_64-linux-gnu.so.p/meson-generated_parzenhist.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [23/120] cc -Idipy/align/crosscorr.cpython-312-x86_64-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/align/crosscorr.cpython-312-x86_64-linux-gnu.so.p/meson-generated_crosscorr.c.o -MF dipy/align/crosscorr.cpython-312-x86_64-linux-gnu.so.p/meson-generated_crosscorr.c.o.d -o dipy/align/crosscorr.cpython-312-x86_64-linux-gnu.so.p/meson-generated_crosscorr.c.o -c dipy/align/crosscorr.cpython-312-x86_64-linux-gnu.so.p/crosscorr.c [24/120] cc -o dipy/align/expectmax.cpython-312-x86_64-linux-gnu.so dipy/align/expectmax.cpython-312-x86_64-linux-gnu.so.p/meson-generated_expectmax.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [25/120] /usr/bin/cython -3 --fast-fail --output-file dipy/denoise/denspeed.cpython-312-x86_64-linux-gnu.so.p/denspeed.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/denoise/denspeed.pyx [26/120] /usr/bin/cython -3 --fast-fail --output-file dipy/denoise/enhancement_kernel.cpython-312-x86_64-linux-gnu.so.p/enhancement_kernel.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/denoise/enhancement_kernel.pyx performance hint: /<>/dipy/denoise/enhancement_kernel.pyx:399:5: Exception check on 'euler_angles' will always require the GIL to be acquired. Declare 'euler_angles' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/denoise/enhancement_kernel.pyx:444:5: Exception check on 'R' will always require the GIL to be acquired. Declare 'R' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/denoise/enhancement_kernel.pyx:206:67: Exception check after calling 'k2' will always require the GIL to be acquired. Declare 'k2' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/denoise/enhancement_kernel.pyx:247:30: Exception check after calling 'k2' will always require the GIL to be acquired. Declare 'k2' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. [27/120] cc -o dipy/align/sumsqdiff.cpython-312-x86_64-linux-gnu.so dipy/align/sumsqdiff.cpython-312-x86_64-linux-gnu.so.p/meson-generated_sumsqdiff.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [28/120] cc -o dipy/align/crosscorr.cpython-312-x86_64-linux-gnu.so dipy/align/crosscorr.cpython-312-x86_64-linux-gnu.so.p/meson-generated_crosscorr.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [29/120] /usr/bin/cython -3 --fast-fail --output-file dipy/denoise/nlmeans_block.cpython-312-x86_64-linux-gnu.so.p/nlmeans_block.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/denoise/nlmeans_block.pyx performance hint: /<>/dipy/denoise/nlmeans_block.pyx:74:5: Exception check on '_average_block' will always require the GIL to be acquired. Possible solutions: 1. Declare '_average_block' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_average_block' to allow an error code to be returned. performance hint: /<>/dipy/denoise/nlmeans_block.pyx:120:5: Exception check on '_value_block' will always require the GIL to be acquired. Possible solutions: 1. Declare '_value_block' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_value_block' to allow an error code to be returned. performance hint: /<>/dipy/denoise/nlmeans_block.pyx:428:38: Exception check after calling '_average_block' will always require the GIL to be acquired. Possible solutions: 1. Declare '_average_block' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_average_block' to allow an error code to be returned. performance hint: /<>/dipy/denoise/nlmeans_block.pyx:430:36: Exception check after calling '_value_block' will always require the GIL to be acquired. Possible solutions: 1. Declare '_value_block' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_value_block' to allow an error code to be returned. performance hint: /<>/dipy/denoise/nlmeans_block.pyx:453:54: Exception check after calling '_average_block' will always require the GIL to be acquired. Possible solutions: 1. Declare '_average_block' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_average_block' to allow an error code to be returned. performance hint: /<>/dipy/denoise/nlmeans_block.pyx:458:40: Exception check after calling '_value_block' will always require the GIL to be acquired. Possible solutions: 1. Declare '_value_block' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_value_block' to allow an error code to be returned. [30/120] /usr/bin/cython -3 --fast-fail --output-file dipy/denoise/pca_noise_estimate.cpython-312-x86_64-linux-gnu.so.p/pca_noise_estimate.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/denoise/pca_noise_estimate.pyx warning: /<>/dipy/denoise/pca_noise_estimate.pyx:95:49: the result of using negative indices inside of code sections marked as 'wraparound=False' is undefined [31/120] cc -Idipy/denoise/denspeed.cpython-312-x86_64-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/denoise/denspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_denspeed.c.o -MF dipy/denoise/denspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_denspeed.c.o.d -o dipy/denoise/denspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_denspeed.c.o -c dipy/denoise/denspeed.cpython-312-x86_64-linux-gnu.so.p/denspeed.c [32/120] cc -o dipy/denoise/denspeed.cpython-312-x86_64-linux-gnu.so dipy/denoise/denspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_denspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [33/120] cc -Idipy/denoise/enhancement_kernel.cpython-312-x86_64-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/denoise/enhancement_kernel.cpython-312-x86_64-linux-gnu.so.p/meson-generated_enhancement_kernel.c.o -MF dipy/denoise/enhancement_kernel.cpython-312-x86_64-linux-gnu.so.p/meson-generated_enhancement_kernel.c.o.d -o dipy/denoise/enhancement_kernel.cpython-312-x86_64-linux-gnu.so.p/meson-generated_enhancement_kernel.c.o -c dipy/denoise/enhancement_kernel.cpython-312-x86_64-linux-gnu.so.p/enhancement_kernel.c [34/120] /usr/bin/cython -3 --fast-fail --output-file dipy/denoise/shift_twist_convolution.cpython-312-x86_64-linux-gnu.so.p/shift_twist_convolution.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/denoise/shift_twist_convolution.pyx [35/120] cc -Idipy/denoise/nlmeans_block.cpython-312-x86_64-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/denoise/nlmeans_block.cpython-312-x86_64-linux-gnu.so.p/meson-generated_nlmeans_block.c.o -MF dipy/denoise/nlmeans_block.cpython-312-x86_64-linux-gnu.so.p/meson-generated_nlmeans_block.c.o.d -o dipy/denoise/nlmeans_block.cpython-312-x86_64-linux-gnu.so.p/meson-generated_nlmeans_block.c.o -c dipy/denoise/nlmeans_block.cpython-312-x86_64-linux-gnu.so.p/nlmeans_block.c [36/120] cc -o dipy/denoise/enhancement_kernel.cpython-312-x86_64-linux-gnu.so dipy/denoise/enhancement_kernel.cpython-312-x86_64-linux-gnu.so.p/meson-generated_enhancement_kernel.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [37/120] cc -o dipy/denoise/nlmeans_block.cpython-312-x86_64-linux-gnu.so dipy/denoise/nlmeans_block.cpython-312-x86_64-linux-gnu.so.p/meson-generated_nlmeans_block.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [38/120] cc -Idipy/denoise/pca_noise_estimate.cpython-312-x86_64-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/denoise/pca_noise_estimate.cpython-312-x86_64-linux-gnu.so.p/meson-generated_pca_noise_estimate.c.o -MF dipy/denoise/pca_noise_estimate.cpython-312-x86_64-linux-gnu.so.p/meson-generated_pca_noise_estimate.c.o.d -o dipy/denoise/pca_noise_estimate.cpython-312-x86_64-linux-gnu.so.p/meson-generated_pca_noise_estimate.c.o -c dipy/denoise/pca_noise_estimate.cpython-312-x86_64-linux-gnu.so.p/pca_noise_estimate.c [39/120] /usr/bin/cython -3 --fast-fail --output-file dipy/direction/bootstrap_direction_getter.cpython-312-x86_64-linux-gnu.so.p/bootstrap_direction_getter.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/direction/bootstrap_direction_getter.pyx warning: /<>/dipy/direction/bootstrap_direction_getter.pyx:153:20: Use boundscheck(False) for faster access [40/120] /usr/bin/cython -3 --fast-fail --output-file dipy/direction/closest_peak_direction_getter.cpython-312-x86_64-linux-gnu.so.p/closest_peak_direction_getter.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/direction/closest_peak_direction_getter.pyx performance hint: /<>/dipy/direction/closest_peak_direction_getter.pyx:108:36: Exception check after calling 'get_pmf_c' will always require the GIL to be acquired. Declare 'get_pmf_c' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. [41/120] cc -o dipy/denoise/pca_noise_estimate.cpython-312-x86_64-linux-gnu.so dipy/denoise/pca_noise_estimate.cpython-312-x86_64-linux-gnu.so.p/meson-generated_pca_noise_estimate.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [42/120] cc -Idipy/denoise/shift_twist_convolution.cpython-312-x86_64-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/denoise/shift_twist_convolution.cpython-312-x86_64-linux-gnu.so.p/meson-generated_shift_twist_convolution.c.o -MF dipy/denoise/shift_twist_convolution.cpython-312-x86_64-linux-gnu.so.p/meson-generated_shift_twist_convolution.c.o.d -o dipy/denoise/shift_twist_convolution.cpython-312-x86_64-linux-gnu.so.p/meson-generated_shift_twist_convolution.c.o -c dipy/denoise/shift_twist_convolution.cpython-312-x86_64-linux-gnu.so.p/shift_twist_convolution.c [43/120] /usr/bin/cython -3 --fast-fail --output-file dipy/direction/pmf.cpython-312-x86_64-linux-gnu.so.p/pmf.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/direction/pmf.pyx performance hint: /<>/dipy/direction/pmf.pyx:57:40: Exception check after calling 'find_closest' will always require the GIL to be acquired. Declare 'find_closest' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/direction/pmf.pyx:58:29: Exception check after calling 'get_pmf_c' will always require the GIL to be acquired. Declare 'get_pmf_c' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/direction/pmf.pyx:83:36: Exception check after calling 'trilinear_interpolate4d_c' will always require the GIL to be acquired. Declare 'trilinear_interpolate4d_c' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/direction/pmf.pyx:84:30: Exception check after calling '_PmfGen__clear_pmf' will always require the GIL to be acquired. Possible solutions: 1. Declare '_PmfGen__clear_pmf' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_PmfGen__clear_pmf' to allow an error code to be returned. performance hint: /<>/dipy/direction/pmf.pyx:95:31: Exception check after calling 'find_closest' will always require the GIL to be acquired. Declare 'find_closest' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/direction/pmf.pyx:97:36: Exception check after calling 'trilinear_interpolate4d_c' will always require the GIL to be acquired. Declare 'trilinear_interpolate4d_c' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/direction/pmf.pyx:100:30: Exception check after calling '_PmfGen__clear_pmf' will always require the GIL to be acquired. Possible solutions: 1. Declare '_PmfGen__clear_pmf' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_PmfGen__clear_pmf' to allow an error code to be returned. performance hint: /<>/dipy/direction/pmf.pyx:132:36: Exception check after calling 'trilinear_interpolate4d_c' will always require the GIL to be acquired. Declare 'trilinear_interpolate4d_c' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/direction/pmf.pyx:133:30: Exception check after calling '_PmfGen__clear_pmf' will always require the GIL to be acquired. Possible solutions: 1. Declare '_PmfGen__clear_pmf' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_PmfGen__clear_pmf' to allow an error code to be returned. [44/120] cc -Idipy/core/interpolation.cpython-312-x86_64-linux-gnu.so.p -Idipy/core -I../dipy/core -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/core/interpolation.cpython-312-x86_64-linux-gnu.so.p/meson-generated_interpolation.c.o -MF dipy/core/interpolation.cpython-312-x86_64-linux-gnu.so.p/meson-generated_interpolation.c.o.d -o dipy/core/interpolation.cpython-312-x86_64-linux-gnu.so.p/meson-generated_interpolation.c.o -c dipy/core/interpolation.cpython-312-x86_64-linux-gnu.so.p/interpolation.c [45/120] cc -o dipy/denoise/shift_twist_convolution.cpython-312-x86_64-linux-gnu.so dipy/denoise/shift_twist_convolution.cpython-312-x86_64-linux-gnu.so.p/meson-generated_shift_twist_convolution.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [46/120] /usr/bin/cython -3 --fast-fail --output-file dipy/direction/probabilistic_direction_getter.cpython-312-x86_64-linux-gnu.so.p/probabilistic_direction_getter.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/direction/probabilistic_direction_getter.pyx performance hint: /<>/dipy/direction/probabilistic_direction_getter.pyx:105:18: Exception check after calling 'cumsum' will always require the GIL to be acquired. Possible solutions: 1. Declare 'cumsum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'cumsum' to allow an error code to be returned. performance hint: /<>/dipy/direction/probabilistic_direction_getter.pyx:184:26: Exception check after calling 'copy_point' will always require the GIL to be acquired. Possible solutions: 1. Declare 'copy_point' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'copy_point' to allow an error code to be returned. performance hint: /<>/dipy/direction/probabilistic_direction_getter.pyx:189:26: Exception check after calling 'copy_point' will always require the GIL to be acquired. Possible solutions: 1. Declare 'copy_point' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'copy_point' to allow an error code to be returned. [47/120] cc -Idipy/direction/bootstrap_direction_getter.cpython-312-x86_64-linux-gnu.so.p -Idipy/direction -I../dipy/direction -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/direction/bootstrap_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_bootstrap_direction_getter.c.o -MF dipy/direction/bootstrap_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_bootstrap_direction_getter.c.o.d -o dipy/direction/bootstrap_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_bootstrap_direction_getter.c.o -c dipy/direction/bootstrap_direction_getter.cpython-312-x86_64-linux-gnu.so.p/bootstrap_direction_getter.c [48/120] cc -o dipy/core/interpolation.cpython-312-x86_64-linux-gnu.so dipy/core/interpolation.cpython-312-x86_64-linux-gnu.so.p/meson-generated_interpolation.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [49/120] cc -Idipy/direction/closest_peak_direction_getter.cpython-312-x86_64-linux-gnu.so.p -Idipy/direction -I../dipy/direction -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/direction/closest_peak_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_closest_peak_direction_getter.c.o -MF dipy/direction/closest_peak_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_closest_peak_direction_getter.c.o.d -o dipy/direction/closest_peak_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_closest_peak_direction_getter.c.o -c dipy/direction/closest_peak_direction_getter.cpython-312-x86_64-linux-gnu.so.p/closest_peak_direction_getter.c [50/120] /usr/bin/cython -3 --fast-fail --output-file dipy/direction/ptt_direction_getter.cpython-312-x86_64-linux-gnu.so.p/ptt_direction_getter.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/direction/ptt_direction_getter.pyx [51/120] cc -o dipy/direction/bootstrap_direction_getter.cpython-312-x86_64-linux-gnu.so dipy/direction/bootstrap_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_bootstrap_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [52/120] cc -o dipy/direction/closest_peak_direction_getter.cpython-312-x86_64-linux-gnu.so dipy/direction/closest_peak_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_closest_peak_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [53/120] cc -Idipy/direction/pmf.cpython-312-x86_64-linux-gnu.so.p -Idipy/direction -I../dipy/direction -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/direction/pmf.cpython-312-x86_64-linux-gnu.so.p/meson-generated_pmf.c.o -MF dipy/direction/pmf.cpython-312-x86_64-linux-gnu.so.p/meson-generated_pmf.c.o.d -o dipy/direction/pmf.cpython-312-x86_64-linux-gnu.so.p/meson-generated_pmf.c.o -c dipy/direction/pmf.cpython-312-x86_64-linux-gnu.so.p/pmf.c [54/120] /usr/bin/cython -3 --fast-fail --output-file dipy/reconst/eudx_direction_getter.cpython-312-x86_64-linux-gnu.so.p/eudx_direction_getter.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/reconst/eudx_direction_getter.pyx [55/120] /usr/bin/cython -3 --fast-fail --output-file dipy/reconst/quick_squash.cpython-312-x86_64-linux-gnu.so.p/quick_squash.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/reconst/quick_squash.pyx [56/120] cc -Idipy/direction/probabilistic_direction_getter.cpython-312-x86_64-linux-gnu.so.p -Idipy/direction -I../dipy/direction -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/direction/probabilistic_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_probabilistic_direction_getter.c.o -MF dipy/direction/probabilistic_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_probabilistic_direction_getter.c.o.d -o dipy/direction/probabilistic_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_probabilistic_direction_getter.c.o -c dipy/direction/probabilistic_direction_getter.cpython-312-x86_64-linux-gnu.so.p/probabilistic_direction_getter.c [57/120] cc -o dipy/direction/pmf.cpython-312-x86_64-linux-gnu.so dipy/direction/pmf.cpython-312-x86_64-linux-gnu.so.p/meson-generated_pmf.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [58/120] /usr/bin/cython -3 --fast-fail --output-file dipy/reconst/recspeed.cpython-312-x86_64-linux-gnu.so.p/recspeed.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/reconst/recspeed.pyx performance hint: /<>/dipy/reconst/recspeed.pyx:260:5: Exception check on '_cosort' will always require the GIL to be acquired. Possible solutions: 1. Declare '_cosort' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_cosort' to allow an error code to be returned. [59/120] cc -o dipy/direction/probabilistic_direction_getter.cpython-312-x86_64-linux-gnu.so dipy/direction/probabilistic_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_probabilistic_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [60/120] /usr/bin/cython -3 --fast-fail --output-file dipy/reconst/vec_val_sum.cpython-312-x86_64-linux-gnu.so.p/vec_val_sum.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/reconst/vec_val_sum.pyx [61/120] cc -Idipy/reconst/eudx_direction_getter.cpython-312-x86_64-linux-gnu.so.p -Idipy/reconst -I../dipy/reconst -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/reconst/eudx_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_eudx_direction_getter.c.o -MF dipy/reconst/eudx_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_eudx_direction_getter.c.o.d -o dipy/reconst/eudx_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_eudx_direction_getter.c.o -c dipy/reconst/eudx_direction_getter.cpython-312-x86_64-linux-gnu.so.p/eudx_direction_getter.c [62/120] cc -Idipy/direction/ptt_direction_getter.cpython-312-x86_64-linux-gnu.so.p -Idipy/direction -I../dipy/direction -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/direction/ptt_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_ptt_direction_getter.c.o -MF dipy/direction/ptt_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_ptt_direction_getter.c.o.d -o dipy/direction/ptt_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_ptt_direction_getter.c.o -c dipy/direction/ptt_direction_getter.cpython-312-x86_64-linux-gnu.so.p/ptt_direction_getter.c [63/120] cc -Idipy/reconst/quick_squash.cpython-312-x86_64-linux-gnu.so.p -Idipy/reconst -I../dipy/reconst -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/reconst/quick_squash.cpython-312-x86_64-linux-gnu.so.p/meson-generated_quick_squash.c.o -MF dipy/reconst/quick_squash.cpython-312-x86_64-linux-gnu.so.p/meson-generated_quick_squash.c.o.d -o dipy/reconst/quick_squash.cpython-312-x86_64-linux-gnu.so.p/meson-generated_quick_squash.c.o -c dipy/reconst/quick_squash.cpython-312-x86_64-linux-gnu.so.p/quick_squash.c [64/120] cc -o dipy/reconst/eudx_direction_getter.cpython-312-x86_64-linux-gnu.so dipy/reconst/eudx_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_eudx_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [65/120] cc -o dipy/direction/ptt_direction_getter.cpython-312-x86_64-linux-gnu.so dipy/direction/ptt_direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_ptt_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [66/120] cc -o dipy/reconst/quick_squash.cpython-312-x86_64-linux-gnu.so dipy/reconst/quick_squash.cpython-312-x86_64-linux-gnu.so.p/meson-generated_quick_squash.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [67/120] /usr/bin/cython -3 --fast-fail --output-file dipy/segment/clustering_algorithms.cpython-312-x86_64-linux-gnu.so.p/clustering_algorithms.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/segment/clustering_algorithms.pyx warning: /<>/dipy/segment/metricspeed.pxd:9:87: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/metricspeed.pxd:10:86: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pxd:7:71: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pxd:8:78: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pxd:62:100: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pxd:63:60: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pxd:72:108: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pxd:73:68: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pxd:74:85: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pxd:89:95: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pxd:90:91: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pxd:91:75: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. [68/120] /usr/bin/cython -3 --fast-fail --output-file dipy/segment/clusteringspeed.cpython-312-x86_64-linux-gnu.so.p/clusteringspeed.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/segment/clusteringspeed.pyx warning: /<>/dipy/segment/clusteringspeed.pxd:62:100: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pxd:63:60: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pxd:72:108: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pxd:73:68: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pxd:74:85: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pxd:89:95: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pxd:90:91: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pxd:91:75: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/metricspeed.pxd:9:87: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/metricspeed.pxd:10:86: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pxd:7:71: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pxd:8:78: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pyx:331:100: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pyx:348:60: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pyx:412:108: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pyx:439:85: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pyx:469:68: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pyx:507:95: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pyx:543:91: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/clusteringspeed.pyx:604:75: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. performance hint: /<>/dipy/segment/clusteringspeed.pyx:56:5: Exception check on 'aabb_creation' will always require the GIL to be acquired. Possible solutions: 1. Declare 'aabb_creation' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'aabb_creation' to allow an error code to be returned. performance hint: /<>/dipy/segment/clusteringspeed.pyx:102:37: Exception check after calling 'create_memview_2d' will always require the GIL to be acquired. Declare 'create_memview_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/clusteringspeed.pyx:201:21: Exception check after calling 'aabb_creation' will always require the GIL to be acquired. Possible solutions: 1. Declare 'aabb_creation' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'aabb_creation' to allow an error code to be returned. performance hint: /<>/dipy/segment/clusteringspeed.pyx:209:25: Exception check after calling '_update_node' will always require the GIL to be acquired. Possible solutions: 1. Declare '_update_node' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_update_node' to allow an error code to be returned. performance hint: /<>/dipy/segment/clusteringspeed.pyx:240:48: Exception check after calling '_add_child' will always require the GIL to be acquired. Declare '_add_child' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/clusteringspeed.pyx:244:23: Exception check after calling '_insert_in' will always require the GIL to be acquired. Possible solutions: 1. Declare '_insert_in' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_insert_in' to allow an error code to be returned. performance hint: /<>/dipy/segment/clusteringspeed.pyx:437:25: Exception check after calling 'c_assign' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_assign' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_assign' to allow an error code to be returned. performance hint: /<>/dipy/segment/clusteringspeed.pyx:465:21: Exception check after calling 'aabb_creation' will always require the GIL to be acquired. Possible solutions: 1. Declare 'aabb_creation' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'aabb_creation' to allow an error code to be returned. performance hint: /<>/dipy/segment/clusteringspeed.pyx:485:70: Exception check after calling 'create_memview_2d' will always require the GIL to be acquired. Declare 'create_memview_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/clusteringspeed.pyx:486:79: Exception check after calling 'create_memview_2d' will always require the GIL to be acquired. Declare 'create_memview_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/clusteringspeed.pyx:488:21: Exception check after calling 'aabb_creation' will always require the GIL to be acquired. Possible solutions: 1. Declare 'aabb_creation' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'aabb_creation' to allow an error code to be returned. performance hint: /<>/dipy/segment/clusteringspeed.pyx:530:43: Exception check after calling 'c_size' will always require the GIL to be acquired. Declare 'c_size' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/clusteringspeed.pyx:566:68: Exception check after calling 'c_infer_shape' will always require the GIL to be acquired. Declare 'c_infer_shape' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/clusteringspeed.pyx:569:25: Exception check after calling 'same_shape' will always require the GIL to be acquired. Declare 'same_shape' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/clusteringspeed.pyx:579:37: Exception check after calling 'c_extract' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_extract' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_extract' to allow an error code to be returned. performance hint: /<>/dipy/segment/clusteringspeed.pyx:580:51: Exception check after calling 'find_nearest_cluster' will always require the GIL to be acquired. Declare 'find_nearest_cluster' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/clusteringspeed.pyx:584:41: Exception check after calling 'c_extract' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_extract' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_extract' to allow an error code to be returned. performance hint: /<>/dipy/segment/clusteringspeed.pyx:585:60: Exception check after calling 'find_nearest_cluster' will always require the GIL to be acquired. Declare 'find_nearest_cluster' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/clusteringspeed.pyx:598:77: Exception check after calling 'c_size' will always require the GIL to be acquired. Declare 'c_size' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/clusteringspeed.pyx:601:30: Exception check after calling 'c_assign' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_assign' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_assign' to allow an error code to be returned. [69/120] cc -Idipy/reconst/vec_val_sum.cpython-312-x86_64-linux-gnu.so.p -Idipy/reconst -I../dipy/reconst -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/reconst/vec_val_sum.cpython-312-x86_64-linux-gnu.so.p/meson-generated_vec_val_sum.c.o -MF dipy/reconst/vec_val_sum.cpython-312-x86_64-linux-gnu.so.p/meson-generated_vec_val_sum.c.o.d -o dipy/reconst/vec_val_sum.cpython-312-x86_64-linux-gnu.so.p/meson-generated_vec_val_sum.c.o -c dipy/reconst/vec_val_sum.cpython-312-x86_64-linux-gnu.so.p/vec_val_sum.c [70/120] /usr/bin/cython -3 --fast-fail --output-file dipy/segment/cythonutils.cpython-312-x86_64-linux-gnu.so.p/cythonutils.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/segment/cythonutils.pyx performance hint: /<>/dipy/segment/cythonutils.pyx:14:5: Exception check on 'shape_from_memview' will always require the GIL to be acquired. Declare 'shape_from_memview' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/cythonutils.pyx:143:5: Exception check on 'free_memview_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare 'free_memview_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'free_memview_2d' to allow an error code to be returned. [71/120] cc -o dipy/reconst/vec_val_sum.cpython-312-x86_64-linux-gnu.so dipy/reconst/vec_val_sum.cpython-312-x86_64-linux-gnu.so.p/meson-generated_vec_val_sum.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [72/120] /usr/bin/cython -3 --fast-fail --output-file dipy/segment/featurespeed.cpython-312-x86_64-linux-gnu.so.p/featurespeed.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/segment/featurespeed.pyx warning: /<>/dipy/segment/featurespeed.pxd:7:71: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pxd:8:78: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pyx:39:71: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pyx:52:78: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pyx:177:79: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pyx:180:86: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pyx:207:79: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pyx:212:86: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pyx:228:83: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pyx:236:90: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pyx:263:79: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pyx:271:86: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pyx:293:80: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pyx:301:87: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pyx:318:88: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pyx:326:95: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. performance hint: /<>/dipy/segment/featurespeed.pyx:178:33: Exception check after calling '__pyx_fuse_1shape_from_memview' will always require the GIL to be acquired. Declare '__pyx_fuse_1shape_from_memview' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/featurespeed.pyx:208:45: Exception check after calling '__pyx_fuse_1shape_from_memview' will always require the GIL to be acquired. Declare '__pyx_fuse_1shape_from_memview' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/featurespeed.pyx:213:30: Exception check after calling '__pyx_fuse_0c_set_number_of_points' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0c_set_number_of_points' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0c_set_number_of_points' to allow an error code to be returned. performance hint: /<>/dipy/segment/featurespeed.pyx:229:45: Exception check after calling '__pyx_fuse_1shape_from_memview' will always require the GIL to be acquired. Declare '__pyx_fuse_1shape_from_memview' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/featurespeed.pyx:264:45: Exception check after calling '__pyx_fuse_1shape_from_memview' will always require the GIL to be acquired. Declare '__pyx_fuse_1shape_from_memview' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/featurespeed.pyx:294:45: Exception check after calling '__pyx_fuse_1shape_from_memview' will always require the GIL to be acquired. Declare '__pyx_fuse_1shape_from_memview' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/featurespeed.pyx:302:28: Exception check after calling '__pyx_fuse_0c_length' will always require the GIL to be acquired. Declare '__pyx_fuse_0c_length' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/featurespeed.pyx:319:45: Exception check after calling '__pyx_fuse_1shape_from_memview' will always require the GIL to be acquired. Declare '__pyx_fuse_1shape_from_memview' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. [73/120] cc -Idipy/reconst/recspeed.cpython-312-x86_64-linux-gnu.so.p -Idipy/reconst -I../dipy/reconst -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/reconst/recspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_recspeed.c.o -MF dipy/reconst/recspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_recspeed.c.o.d -o dipy/reconst/recspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_recspeed.c.o -c dipy/reconst/recspeed.cpython-312-x86_64-linux-gnu.so.p/recspeed.c [74/120] cc -Idipy/segment/cythonutils.cpython-312-x86_64-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/segment/cythonutils.cpython-312-x86_64-linux-gnu.so.p/meson-generated_cythonutils.c.o -MF dipy/segment/cythonutils.cpython-312-x86_64-linux-gnu.so.p/meson-generated_cythonutils.c.o.d -o dipy/segment/cythonutils.cpython-312-x86_64-linux-gnu.so.p/meson-generated_cythonutils.c.o -c dipy/segment/cythonutils.cpython-312-x86_64-linux-gnu.so.p/cythonutils.c [75/120] cc -Idipy/segment/clustering_algorithms.cpython-312-x86_64-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/segment/clustering_algorithms.cpython-312-x86_64-linux-gnu.so.p/meson-generated_clustering_algorithms.c.o -MF dipy/segment/clustering_algorithms.cpython-312-x86_64-linux-gnu.so.p/meson-generated_clustering_algorithms.c.o.d -o dipy/segment/clustering_algorithms.cpython-312-x86_64-linux-gnu.so.p/meson-generated_clustering_algorithms.c.o -c dipy/segment/clustering_algorithms.cpython-312-x86_64-linux-gnu.so.p/clustering_algorithms.c [76/120] cc -Idipy/segment/clusteringspeed.cpython-312-x86_64-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/segment/clusteringspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_clusteringspeed.c.o -MF dipy/segment/clusteringspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_clusteringspeed.c.o.d -o dipy/segment/clusteringspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_clusteringspeed.c.o -c dipy/segment/clusteringspeed.cpython-312-x86_64-linux-gnu.so.p/clusteringspeed.c [77/120] cc -o dipy/segment/cythonutils.cpython-312-x86_64-linux-gnu.so dipy/segment/cythonutils.cpython-312-x86_64-linux-gnu.so.p/meson-generated_cythonutils.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [78/120] cc -o dipy/reconst/recspeed.cpython-312-x86_64-linux-gnu.so dipy/reconst/recspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_recspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [79/120] cc -o dipy/segment/clustering_algorithms.cpython-312-x86_64-linux-gnu.so dipy/segment/clustering_algorithms.cpython-312-x86_64-linux-gnu.so.p/meson-generated_clustering_algorithms.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [80/120] /usr/bin/cython -3 --fast-fail --output-file dipy/segment/metricspeed.cpython-312-x86_64-linux-gnu.so.p/metricspeed.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/segment/metricspeed.pyx warning: /<>/dipy/segment/metricspeed.pxd:9:87: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/metricspeed.pxd:10:86: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pxd:7:71: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/featurespeed.pxd:8:78: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/metricspeed.pyx:48:86: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/metricspeed.pyx:53:87: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/metricspeed.pyx:230:108: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/metricspeed.pyx:246:107: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/metricspeed.pyx:282:112: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/metricspeed.pyx:320:111: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/metricspeed.pyx:341:92: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /<>/dipy/segment/metricspeed.pyx:344:93: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. performance hint: /<>/dipy/segment/metricspeed.pyx:247:25: Exception check after calling 'same_shape' will always require the GIL to be acquired. Declare 'same_shape' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/segment/metricspeed.pyx:342:25: Exception check after calling 'same_shape' will always require the GIL to be acquired. Declare 'same_shape' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. [81/120] /usr/bin/cython -3 --fast-fail --output-file dipy/segment/mrf.cpython-312-x86_64-linux-gnu.so.p/mrf.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/segment/mrf.pyx performance hint: /<>/dipy/segment/mrf.pyx:239:5: Exception check on '_initialize_param_uniform' will always require the GIL to be acquired. Possible solutions: 1. Declare '_initialize_param_uniform' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_initialize_param_uniform' to allow an error code to be returned. performance hint: /<>/dipy/segment/mrf.pyx:284:5: Exception check on '_negloglikelihood' will always require the GIL to be acquired. Possible solutions: 1. Declare '_negloglikelihood' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_negloglikelihood' to allow an error code to be returned. performance hint: /<>/dipy/segment/mrf.pyx:338:5: Exception check on '_prob_image' will always require the GIL to be acquired. Possible solutions: 1. Declare '_prob_image' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_prob_image' to allow an error code to be returned. performance hint: /<>/dipy/segment/mrf.pyx:507:5: Exception check on '_initialize_maximum_likelihood' will always require the GIL to be acquired. Possible solutions: 1. Declare '_initialize_maximum_likelihood' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_initialize_maximum_likelihood' to allow an error code to be returned. performance hint: /<>/dipy/segment/mrf.pyx:551:5: Exception check on '_icm_ising' will always require the GIL to be acquired. Possible solutions: 1. Declare '_icm_ising' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_icm_ising' to allow an error code to be returned. performance hint: /<>/dipy/segment/mrf.pyx:633:5: Exception check on '_prob_class_given_neighb' will always require the GIL to be acquired. Possible solutions: 1. Declare '_prob_class_given_neighb' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_prob_class_given_neighb' to allow an error code to be returned. [82/120] /usr/bin/cython -3 --fast-fail --output-file dipy/tracking/direction_getter.cpython-312-x86_64-linux-gnu.so.p/direction_getter.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/tracking/direction_getter.pyx performance hint: /<>/dipy/tracking/direction_getter.pyx:32:5: Exception check on '_step_to_boundary' will always require the GIL to be acquired. Possible solutions: 1. Declare '_step_to_boundary' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_step_to_boundary' to allow an error code to be returned. performance hint: /<>/dipy/tracking/direction_getter.pyx:65:5: Exception check on '_fixed_step' will always require the GIL to be acquired. Possible solutions: 1. Declare '_fixed_step' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_fixed_step' to allow an error code to be returned. [83/120] cc -o dipy/segment/clusteringspeed.cpython-312-x86_64-linux-gnu.so dipy/segment/clusteringspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_clusteringspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [84/120] /usr/bin/cython -3 --fast-fail --output-file dipy/tracking/distances.cpython-312-x86_64-linux-gnu.so.p/distances.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/tracking/distances.pyx performance hint: /<>/dipy/tracking/distances.pyx:137:5: Exception check on 'csub_3vecs' will always require the GIL to be acquired. Possible solutions: 1. Declare 'csub_3vecs' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'csub_3vecs' to allow an error code to be returned. performance hint: /<>/dipy/tracking/distances.pyx:153:5: Exception check on 'cadd_3vecs' will always require the GIL to be acquired. Possible solutions: 1. Declare 'cadd_3vecs' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'cadd_3vecs' to allow an error code to be returned. performance hint: /<>/dipy/tracking/distances.pyx:167:5: Exception check on 'cmul_3vecs' will always require the GIL to be acquired. Possible solutions: 1. Declare 'cmul_3vecs' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'cmul_3vecs' to allow an error code to be returned. performance hint: /<>/dipy/tracking/distances.pyx:179:5: Exception check on 'cmul_3vec' will always require the GIL to be acquired. Possible solutions: 1. Declare 'cmul_3vec' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'cmul_3vec' to allow an error code to be returned. performance hint: /<>/dipy/tracking/distances.pyx:689:5: Exception check on 'min_distances' will always require the GIL to be acquired. Possible solutions: 1. Declare 'min_distances' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'min_distances' to allow an error code to be returned. performance hint: /<>/dipy/tracking/distances.pyx:1445:5: Exception check on 'track_direct_flip_dist' will always require the GIL to be acquired. Possible solutions: 1. Declare 'track_direct_flip_dist' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'track_direct_flip_dist' to allow an error code to be returned. performance hint: /<>/dipy/tracking/distances.pyx:1504:5: Exception check on 'track_direct_flip_3dist' will always require the GIL to be acquired. Possible solutions: 1. Declare 'track_direct_flip_3dist' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'track_direct_flip_3dist' to allow an error code to be returned. performance hint: /<>/dipy/tracking/distances.pyx:661:17: Exception check after calling 'min_distances' will always require the GIL to be acquired. Possible solutions: 1. Declare 'min_distances' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'min_distances' to allow an error code to be returned. performance hint: /<>/dipy/tracking/distances.pyx:1387:14: Exception check after calling 'csub_3vecs' will always require the GIL to be acquired. Possible solutions: 1. Declare 'csub_3vecs' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'csub_3vecs' to allow an error code to be returned. performance hint: /<>/dipy/tracking/distances.pyx:1388:14: Exception check after calling 'csub_3vecs' will always require the GIL to be acquired. Possible solutions: 1. Declare 'csub_3vecs' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'csub_3vecs' to allow an error code to be returned. performance hint: /<>/dipy/tracking/distances.pyx:1389:14: Exception check after calling 'csub_3vecs' will always require the GIL to be acquired. Possible solutions: 1. Declare 'csub_3vecs' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'csub_3vecs' to allow an error code to be returned. performance hint: /<>/dipy/tracking/distances.pyx:1668:38: Exception check after calling 'track_direct_flip_dist' will always require the GIL to be acquired. Possible solutions: 1. Declare 'track_direct_flip_dist' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'track_direct_flip_dist' to allow an error code to be returned. [85/120] cc -Idipy/segment/featurespeed.cpython-312-x86_64-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/segment/featurespeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_featurespeed.c.o -MF dipy/segment/featurespeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_featurespeed.c.o.d -o dipy/segment/featurespeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_featurespeed.c.o -c dipy/segment/featurespeed.cpython-312-x86_64-linux-gnu.so.p/featurespeed.c [86/120] cc -o dipy/segment/featurespeed.cpython-312-x86_64-linux-gnu.so dipy/segment/featurespeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_featurespeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [87/120] /usr/bin/cython -3 --fast-fail --output-file dipy/tracking/fbcmeasures.cpython-312-x86_64-linux-gnu.so.p/fbcmeasures.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/tracking/fbcmeasures.pyx [88/120] cc -Idipy/tracking/direction_getter.cpython-312-x86_64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/tracking/direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_direction_getter.c.o -MF dipy/tracking/direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_direction_getter.c.o.d -o dipy/tracking/direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_direction_getter.c.o -c dipy/tracking/direction_getter.cpython-312-x86_64-linux-gnu.so.p/direction_getter.c [89/120] cc -Idipy/segment/mrf.cpython-312-x86_64-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/segment/mrf.cpython-312-x86_64-linux-gnu.so.p/meson-generated_mrf.c.o -MF dipy/segment/mrf.cpython-312-x86_64-linux-gnu.so.p/meson-generated_mrf.c.o.d -o dipy/segment/mrf.cpython-312-x86_64-linux-gnu.so.p/meson-generated_mrf.c.o -c dipy/segment/mrf.cpython-312-x86_64-linux-gnu.so.p/mrf.c [90/120] cc -Idipy/segment/metricspeed.cpython-312-x86_64-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/segment/metricspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_metricspeed.c.o -MF dipy/segment/metricspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_metricspeed.c.o.d -o dipy/segment/metricspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_metricspeed.c.o -c dipy/segment/metricspeed.cpython-312-x86_64-linux-gnu.so.p/metricspeed.c [91/120] cc -o dipy/tracking/direction_getter.cpython-312-x86_64-linux-gnu.so dipy/tracking/direction_getter.cpython-312-x86_64-linux-gnu.so.p/meson-generated_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [92/120] /usr/bin/cython -3 --fast-fail --output-file dipy/tracking/localtrack.cpython-312-x86_64-linux-gnu.so.p/localtrack.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/tracking/localtrack.pyx [93/120] cc -o dipy/segment/mrf.cpython-312-x86_64-linux-gnu.so dipy/segment/mrf.cpython-312-x86_64-linux-gnu.so.p/meson-generated_mrf.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [94/120] cc -o dipy/segment/metricspeed.cpython-312-x86_64-linux-gnu.so dipy/segment/metricspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_metricspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [95/120] /usr/bin/cython -3 --fast-fail --output-file dipy/tracking/propspeed.cpython-312-x86_64-linux-gnu.so.p/propspeed.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/tracking/propspeed.pyx performance hint: /<>/dipy/tracking/propspeed.pyx:186:32: Exception check after calling '_trilinear_interpolation_iso' will always require the GIL to be acquired. Possible solutions: 1. Declare '_trilinear_interpolation_iso' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_trilinear_interpolation_iso' to allow an error code to be returned. performance hint: /<>/dipy/tracking/propspeed.pyx:199:24: Exception check after calling 'offset' will always require the GIL to be acquired. Declare 'offset' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/tracking/propspeed.pyx:251:16: Exception check after calling 'offset' will always require the GIL to be acquired. Declare 'offset' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. [96/120] /usr/bin/cython -3 --fast-fail --output-file dipy/tracking/stopping_criterion.cpython-312-x86_64-linux-gnu.so.p/stopping_criterion.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/tracking/stopping_criterion.pyx [97/120] cc -Idipy/tracking/distances.cpython-312-x86_64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/tracking/distances.cpython-312-x86_64-linux-gnu.so.p/meson-generated_distances.c.o -MF dipy/tracking/distances.cpython-312-x86_64-linux-gnu.so.p/meson-generated_distances.c.o.d -o dipy/tracking/distances.cpython-312-x86_64-linux-gnu.so.p/meson-generated_distances.c.o -c dipy/tracking/distances.cpython-312-x86_64-linux-gnu.so.p/distances.c [98/120] cc -Idipy/tracking/fbcmeasures.cpython-312-x86_64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/tracking/fbcmeasures.cpython-312-x86_64-linux-gnu.so.p/meson-generated_fbcmeasures.c.o -MF dipy/tracking/fbcmeasures.cpython-312-x86_64-linux-gnu.so.p/meson-generated_fbcmeasures.c.o.d -o dipy/tracking/fbcmeasures.cpython-312-x86_64-linux-gnu.so.p/meson-generated_fbcmeasures.c.o -c dipy/tracking/fbcmeasures.cpython-312-x86_64-linux-gnu.so.p/fbcmeasures.c [99/120] cc -o dipy/tracking/distances.cpython-312-x86_64-linux-gnu.so dipy/tracking/distances.cpython-312-x86_64-linux-gnu.so.p/meson-generated_distances.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [100/120] cc -Idipy/tracking/propspeed.cpython-312-x86_64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/tracking/propspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_propspeed.c.o -MF dipy/tracking/propspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_propspeed.c.o.d -o dipy/tracking/propspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_propspeed.c.o -c dipy/tracking/propspeed.cpython-312-x86_64-linux-gnu.so.p/propspeed.c [101/120] cc -Idipy/tracking/localtrack.cpython-312-x86_64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/tracking/localtrack.cpython-312-x86_64-linux-gnu.so.p/meson-generated_localtrack.c.o -MF dipy/tracking/localtrack.cpython-312-x86_64-linux-gnu.so.p/meson-generated_localtrack.c.o.d -o dipy/tracking/localtrack.cpython-312-x86_64-linux-gnu.so.p/meson-generated_localtrack.c.o -c dipy/tracking/localtrack.cpython-312-x86_64-linux-gnu.so.p/localtrack.c [102/120] /usr/bin/cython -3 --fast-fail --output-file dipy/tracking/streamlinespeed.cpython-312-x86_64-linux-gnu.so.p/streamlinespeed.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/tracking/streamlinespeed.pyx performance hint: /<>/dipy/tracking/streamlinespeed.pyx:33:5: Exception check on 'c_arclengths_from_arraysequence' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_arclengths_from_arraysequence' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_arclengths_from_arraysequence' to allow an error code to be returned. performance hint: /<>/dipy/tracking/streamlinespeed.pyx:182:5: Exception check on 'c_arclengths' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_arclengths' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_arclengths' to allow an error code to be returned. performance hint: /<>/dipy/tracking/streamlinespeed.pyx:196:5: Exception check on 'c_set_number_of_points' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_set_number_of_points' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_set_number_of_points' to allow an error code to be returned. performance hint: /<>/dipy/tracking/streamlinespeed.pyx:245:5: Exception check on 'c_set_number_of_points_from_arraysequence' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_set_number_of_points_from_arraysequence' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_set_number_of_points_from_arraysequence' to allow an error code to be returned. performance hint: /<>/dipy/tracking/streamlinespeed.pyx:206:16: Exception check after calling '__pyx_fuse_0c_arclengths' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0c_arclengths' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0c_arclengths' to allow an error code to be returned. performance hint: /<>/dipy/tracking/streamlinespeed.pyx:206:16: Exception check after calling '__pyx_fuse_1c_arclengths' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1c_arclengths' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1c_arclengths' to allow an error code to be returned. performance hint: /<>/dipy/tracking/streamlinespeed.pyx:260:30: Exception check after calling '__pyx_fuse_0c_set_number_of_points' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0c_set_number_of_points' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0c_set_number_of_points' to allow an error code to be returned. performance hint: /<>/dipy/tracking/streamlinespeed.pyx:260:30: Exception check after calling '__pyx_fuse_1c_set_number_of_points' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1c_set_number_of_points' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1c_set_number_of_points' to allow an error code to be returned. [103/120] cc -o dipy/tracking/fbcmeasures.cpython-312-x86_64-linux-gnu.so dipy/tracking/fbcmeasures.cpython-312-x86_64-linux-gnu.so.p/meson-generated_fbcmeasures.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [104/120] cc -o dipy/tracking/propspeed.cpython-312-x86_64-linux-gnu.so dipy/tracking/propspeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_propspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [105/120] cc -o dipy/tracking/localtrack.cpython-312-x86_64-linux-gnu.so dipy/tracking/localtrack.cpython-312-x86_64-linux-gnu.so.p/meson-generated_localtrack.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [106/120] /usr/bin/cython -3 --fast-fail --output-file dipy/tracking/vox2track.cpython-312-x86_64-linux-gnu.so.p/vox2track.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/tracking/vox2track.pyx performance hint: /<>/dipy/tracking/vox2track.pyx:171:5: Exception check on 'c_get_closest_edge' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_get_closest_edge' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_get_closest_edge' to allow an error code to be returned. performance hint: /<>/dipy/tracking/vox2track.pyx:275:30: Exception check after calling 'c_get_closest_edge' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_get_closest_edge' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_get_closest_edge' to allow an error code to be returned. performance hint: /<>/dipy/tracking/vox2track.pyx:314:30: Exception check after calling 'c_get_closest_edge' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_get_closest_edge' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_get_closest_edge' to allow an error code to be returned. [107/120] /usr/bin/cython -3 --fast-fail --output-file dipy/utils/omp.cpython-312-x86_64-linux-gnu.so.p/omp.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/utils/omp.pyx [108/120] /usr/bin/cython -3 --fast-fail --output-file dipy/utils/fast_numpy.cpython-312-x86_64-linux-gnu.so.p/fast_numpy.c --include-dir /<>/.mesonpy-pgiu6tei/dipy ../dipy/utils/fast_numpy.pyx performance hint: /<>/dipy/utils/fast_numpy.pyx:17:5: Exception check on 'cumsum' will always require the GIL to be acquired. Possible solutions: 1. Declare 'cumsum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'cumsum' to allow an error code to be returned. performance hint: /<>/dipy/utils/fast_numpy.pyx:26:5: Exception check on 'copy_point' will always require the GIL to be acquired. Possible solutions: 1. Declare 'copy_point' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'copy_point' to allow an error code to be returned. performance hint: /<>/dipy/utils/fast_numpy.pyx:33:5: Exception check on 'scalar_muliplication_point' will always require the GIL to be acquired. Possible solutions: 1. Declare 'scalar_muliplication_point' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'scalar_muliplication_point' to allow an error code to be returned. performance hint: /<>/dipy/utils/fast_numpy.pyx:70:5: Exception check on 'normalize' will always require the GIL to be acquired. Possible solutions: 1. Declare 'normalize' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'normalize' to allow an error code to be returned. performance hint: /<>/dipy/utils/fast_numpy.pyx:89:5: Exception check on 'cross' will always require the GIL to be acquired. Possible solutions: 1. Declare 'cross' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'cross' to allow an error code to be returned. performance hint: /<>/dipy/utils/fast_numpy.pyx:111:5: Exception check on 'random_vector' will always require the GIL to be acquired. Possible solutions: 1. Declare 'random_vector' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'random_vector' to allow an error code to be returned. performance hint: /<>/dipy/utils/fast_numpy.pyx:129:5: Exception check on 'random_perpendicular_vector' will always require the GIL to be acquired. Possible solutions: 1. Declare 'random_perpendicular_vector' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'random_perpendicular_vector' to allow an error code to be returned. performance hint: /<>/dipy/utils/fast_numpy.pyx:151:6: Exception check on 'random_point_within_circle' will always require the GIL to be acquired. Declare 'random_point_within_circle' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /<>/dipy/utils/fast_numpy.pyx:188:6: Exception check on 'seed' will always require the GIL to be acquired. Possible solutions: 1. Declare 'seed' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'seed' to allow an error code to be returned. performance hint: /<>/dipy/utils/fast_numpy.pyx:126:13: Exception check after calling 'normalize' will always require the GIL to be acquired. Possible solutions: 1. Declare 'normalize' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'normalize' to allow an error code to be returned. performance hint: /<>/dipy/utils/fast_numpy.pyx:146:17: Exception check after calling 'random_vector' will always require the GIL to be acquired. Possible solutions: 1. Declare 'random_vector' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'random_vector' to allow an error code to be returned. performance hint: /<>/dipy/utils/fast_numpy.pyx:147:9: Exception check after calling 'cross' will always require the GIL to be acquired. Possible solutions: 1. Declare 'cross' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'cross' to allow an error code to be returned. performance hint: /<>/dipy/utils/fast_numpy.pyx:148:13: Exception check after calling 'normalize' will always require the GIL to be acquired. Possible solutions: 1. Declare 'normalize' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'normalize' to allow an error code to be returned. [109/120] cc -Idipy/utils/fast_numpy.cpython-312-x86_64-linux-gnu.so.p -Idipy/utils -I../dipy/utils -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/utils/fast_numpy.cpython-312-x86_64-linux-gnu.so.p/meson-generated_fast_numpy.c.o -MF dipy/utils/fast_numpy.cpython-312-x86_64-linux-gnu.so.p/meson-generated_fast_numpy.c.o.d -o dipy/utils/fast_numpy.cpython-312-x86_64-linux-gnu.so.p/meson-generated_fast_numpy.c.o -c dipy/utils/fast_numpy.cpython-312-x86_64-linux-gnu.so.p/fast_numpy.c [110/120] cc -Idipy/tracking/stopping_criterion.cpython-312-x86_64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/tracking/stopping_criterion.cpython-312-x86_64-linux-gnu.so.p/meson-generated_stopping_criterion.c.o -MF dipy/tracking/stopping_criterion.cpython-312-x86_64-linux-gnu.so.p/meson-generated_stopping_criterion.c.o.d -o dipy/tracking/stopping_criterion.cpython-312-x86_64-linux-gnu.so.p/meson-generated_stopping_criterion.c.o -c dipy/tracking/stopping_criterion.cpython-312-x86_64-linux-gnu.so.p/stopping_criterion.c In file included from /usr/include/string.h:548, from /usr/include/python3.12/Python.h:26, from dipy/tracking/stopping_criterion.cpython-312-x86_64-linux-gnu.so.p/stopping_criterion.c:16: In function ‘memcpy’, inlined from ‘__pyx_f_4dipy_8tracking_18stopping_criterion___pyx_unpickle_StoppingCriterion__set_state’ at dipy/tracking/stopping_criterion.cpython-312-x86_64-linux-gnu.so.p/stopping_criterion.c:29845:3: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:29:10: warning: ‘MEM [(char * {ref-all})&__pyx_t_1]’ may be used uninitialized [-Wmaybe-uninitialized] 29 | return __builtin___memcpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 30 | __glibc_objsize0 (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ dipy/tracking/stopping_criterion.cpython-312-x86_64-linux-gnu.so.p/stopping_criterion.c: In function ‘__pyx_f_4dipy_8tracking_18stopping_criterion___pyx_unpickle_StoppingCriterion__set_state’: dipy/tracking/stopping_criterion.cpython-312-x86_64-linux-gnu.so.p/stopping_criterion.c:29819:10: note: ‘MEM [(char * {ref-all})&__pyx_t_1]’ was declared here 29819 | double __pyx_t_1[1]; | ^~~~~~~~~ [111/120] cc -Idipy/utils/omp.cpython-312-x86_64-linux-gnu.so.p -Idipy/utils -I../dipy/utils -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/utils/omp.cpython-312-x86_64-linux-gnu.so.p/meson-generated_omp.c.o -MF dipy/utils/omp.cpython-312-x86_64-linux-gnu.so.p/meson-generated_omp.c.o.d -o dipy/utils/omp.cpython-312-x86_64-linux-gnu.so.p/meson-generated_omp.c.o -c dipy/utils/omp.cpython-312-x86_64-linux-gnu.so.p/omp.c [112/120] cc -o dipy/utils/fast_numpy.cpython-312-x86_64-linux-gnu.so dipy/utils/fast_numpy.cpython-312-x86_64-linux-gnu.so.p/meson-generated_fast_numpy.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [113/120] cc -o dipy/utils/omp.cpython-312-x86_64-linux-gnu.so dipy/utils/omp.cpython-312-x86_64-linux-gnu.so.p/meson-generated_omp.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [114/120] cc -o dipy/tracking/stopping_criterion.cpython-312-x86_64-linux-gnu.so dipy/tracking/stopping_criterion.cpython-312-x86_64-linux-gnu.so.p/meson-generated_stopping_criterion.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [115/120] cc -Idipy/align/vector_fields.cpython-312-x86_64-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/align/vector_fields.cpython-312-x86_64-linux-gnu.so.p/meson-generated_vector_fields.c.o -MF dipy/align/vector_fields.cpython-312-x86_64-linux-gnu.so.p/meson-generated_vector_fields.c.o.d -o dipy/align/vector_fields.cpython-312-x86_64-linux-gnu.so.p/meson-generated_vector_fields.c.o -c dipy/align/vector_fields.cpython-312-x86_64-linux-gnu.so.p/vector_fields.c [116/120] cc -Idipy/tracking/streamlinespeed.cpython-312-x86_64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/tracking/streamlinespeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_streamlinespeed.c.o -MF dipy/tracking/streamlinespeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_streamlinespeed.c.o.d -o dipy/tracking/streamlinespeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_streamlinespeed.c.o -c dipy/tracking/streamlinespeed.cpython-312-x86_64-linux-gnu.so.p/streamlinespeed.c [117/120] cc -Idipy/tracking/vox2track.cpython-312-x86_64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -fopenmp -Wno-cpp -mfpmath=sse -msse -msse2 -MD -MQ dipy/tracking/vox2track.cpython-312-x86_64-linux-gnu.so.p/meson-generated_vox2track.c.o -MF dipy/tracking/vox2track.cpython-312-x86_64-linux-gnu.so.p/meson-generated_vox2track.c.o.d -o dipy/tracking/vox2track.cpython-312-x86_64-linux-gnu.so.p/meson-generated_vox2track.c.o -c dipy/tracking/vox2track.cpython-312-x86_64-linux-gnu.so.p/vox2track.c [118/120] cc -o dipy/tracking/streamlinespeed.cpython-312-x86_64-linux-gnu.so dipy/tracking/streamlinespeed.cpython-312-x86_64-linux-gnu.so.p/meson-generated_streamlinespeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [119/120] cc -o dipy/tracking/vox2track.cpython-312-x86_64-linux-gnu.so dipy/tracking/vox2track.cpython-312-x86_64-linux-gnu.so.p/meson-generated_vox2track.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [120/120] cc -o dipy/align/vector_fields.cpython-312-x86_64-linux-gnu.so dipy/align/vector_fields.cpython-312-x86_64-linux-gnu.so.p/meson-generated_vector_fields.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fdebug-prefix-map=/<>=/usr/src/dipy-1.8.0-2ubuntu1 -Wdate-time -D_FORTIFY_SOURCE=3 -fopenmp [1/517] /<>/.mesonpy-pgiu6tei/dipy/version.py [2/517] /<>/.mesonpy-pgiu6tei/dipy/align/bundlemin.cpython-312-x86_64-linux-gnu.so [3/517] /<>/.mesonpy-pgiu6tei/dipy/align/crosscorr.cpython-312-x86_64-linux-gnu.so [4/517] /<>/.mesonpy-pgiu6tei/dipy/align/expectmax.cpython-312-x86_64-linux-gnu.so [5/517] /<>/.mesonpy-pgiu6tei/dipy/align/parzenhist.cpython-312-x86_64-linux-gnu.so [6/517] /<>/.mesonpy-pgiu6tei/dipy/align/sumsqdiff.cpython-312-x86_64-linux-gnu.so [7/517] 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/<>/dipy/../doc/examples/tracking_probabilistic.py [509/517] /<>/dipy/../doc/examples/tracking_ptt.py [510/517] /<>/dipy/../doc/examples/tracking_rumba.py [511/517] /<>/dipy/../doc/examples/tracking_sfm.py [512/517] /<>/dipy/../doc/examples/tracking_stopping_criterion.py [513/517] /<>/dipy/../doc/examples/viz_advanced.py [514/517] /<>/dipy/../doc/examples/viz_bundles.py [515/517] /<>/dipy/../doc/examples/viz_roi_contour.py [516/517] /<>/dipy/../doc/examples/viz_slice.py [517/517] /<>/dipy/../doc/examples/workflow_creation.py Successfully built dipy-1.8.0-cp312-cp312-linux_x86_64.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.12 with "installer" module find -name func_coef.nii.gz -print -exec chmod 0644 '{}' ';' ./.pybuild/cpython3_3.12_dipy/build/dipy/data/files/func_coef.nii.gz ./.pybuild/cpython3_3.11_dipy/build/dipy/data/files/func_coef.nii.gz ./dipy/data/files/func_coef.nii.gz make[1]: Leaving directory '/<>' debian/rules override_dh_auto_test make[1]: Entering directory '/<>' # Do not test just after build, lets install and then test make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install -O--buildsystem=pybuild I: pybuild plugin_pyproject:178: Copying package built for python3.11 to destdir I: pybuild plugin_pyproject:178: Copying package built for python3.12 to destdir debian/rules execute_after_dh_auto_install make[1]: Entering directory '/<>' py3versions: no X-Python3-Version in control file, using supported versions # Prune duplicate LICENSE file find debian/ -name LICENSE -delete # Only now lets build docs cd doc/ \ && PYTHONPATH=/<>/.pybuild/cpython3_3.12_dipy/build \ /usr/bin/make html SPHINXOPTS="-D today=\"February 12, 2024\"" make[2]: Entering directory '/<>/doc' tools/build_modref_templates.py dipy reference /<>/.pybuild/cpython3_3.12_dipy/build/dipy/viz/__init__.py:22: UserWarning: You do not have FURY installed. Therefore, 3D visualization functions will not work for you. Please install or upgrade FURY using pip install -U furyFor detailed installation instructions visit: https://fury.gl/ warnings.warn( WARNING:root:This model requires Tensorflow. Please install these packages using pip. If using mac, please refer to this link for installation. https://github.com/apple/tensorflow_macos WARNING:root:This model requires Tensorflow. Please install these packages using pip. If using mac, please refer to this link for installation. https://github.com/apple/tensorflow_macos WARNING:root:This model requires Tensorflow and Tensorflow -addons. Please install these packages using pip. If using mac, please refer to this link for installation. https://github.com/apple/tensorflow_macos /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:19: SyntaxWarning: invalid escape sequence '\m' """Convert symmetric 3 x 3 matrices into 6 x 1 vectors. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:57: SyntaxWarning: invalid escape sequence '\m' """Convert 6 x 1 vectors into symmetric 3 x 3 matrices. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:91: SyntaxWarning: invalid escape sequence '\m' """Convert symmetric 6 x 6 matrices into 21 x 1 vectors. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:137: SyntaxWarning: invalid escape sequence '\m' """Convert 21 x 1 vectors into symmetric 6 x 6 matrices. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:187: SyntaxWarning: invalid escape sequence '\m' """Convert a 1 x 6 vector into a symmetric 3 x 3 matrix. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:222: SyntaxWarning: invalid escape sequence '\m' """Convert 1 x 21 vector into a symmetric 6 x 6 matrix. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:280: SyntaxWarning: invalid escape sequence '\m' """Calculate covariance of a diffusion tensor distribution (DTD). /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:323: SyntaxWarning: invalid escape sequence '\e' """Generate signals using the covariance tensor signal representation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:395: SyntaxWarning: invalid escape sequence '\m' """Calculate the design matrix from the b-tensors. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:761: SyntaxWarning: invalid escape sequence '\l' """Mean diffusivity. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:783: SyntaxWarning: invalid escape sequence '\m' """Variance of microscopic mean diffusivities. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:805: SyntaxWarning: invalid escape sequence '\m' """Shear variance. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:827: SyntaxWarning: invalid escape sequence '\m' """Total isotropic variance. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:863: SyntaxWarning: invalid escape sequence '\l' """Average of microscopic diffusion tensors' outer products with /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:886: SyntaxWarning: invalid escape sequence '\m' """Normalized variance of mean diffusivities. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:909: SyntaxWarning: invalid escape sequence '\m' """Normalized microscopic anisotropy. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:934: SyntaxWarning: invalid escape sequence '\m' """Microscopic fractional anisotropy. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:953: SyntaxWarning: invalid escape sequence '\l' """Normalized macroscopic anisotropy. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:979: SyntaxWarning: invalid escape sequence '\s' """Fractional anisotropy. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:998: SyntaxWarning: invalid escape sequence '\m' """Microscopic orientation coherence. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:1036: SyntaxWarning: invalid escape sequence '\m' """Bulk kurtosis. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:1061: SyntaxWarning: invalid escape sequence '\m' """Shear kurtosis. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:1086: SyntaxWarning: invalid escape sequence '\m' """Microscopic kurtosis. :19: SyntaxWarning: invalid escape sequence '\m' :57: SyntaxWarning: invalid escape sequence '\m' :91: SyntaxWarning: invalid escape sequence '\m' :137: SyntaxWarning: invalid escape sequence '\m' :187: SyntaxWarning: invalid escape sequence '\m' :222: SyntaxWarning: invalid escape sequence '\m' :280: SyntaxWarning: invalid escape sequence '\m' :323: SyntaxWarning: invalid escape sequence '\e' :395: SyntaxWarning: invalid escape sequence '\m' :761: SyntaxWarning: invalid escape sequence '\l' :783: SyntaxWarning: invalid escape sequence '\m' :805: SyntaxWarning: invalid escape sequence '\m' :827: SyntaxWarning: invalid escape sequence '\m' :863: SyntaxWarning: invalid escape sequence '\l' :886: SyntaxWarning: invalid escape sequence '\m' :909: SyntaxWarning: invalid escape sequence '\m' :934: SyntaxWarning: invalid escape sequence '\m' :953: SyntaxWarning: invalid escape sequence '\l' :979: SyntaxWarning: invalid escape sequence '\s' :998: SyntaxWarning: invalid escape sequence '\m' :1036: SyntaxWarning: invalid escape sequence '\m' :1061: SyntaxWarning: invalid escape sequence '\m' :1086: SyntaxWarning: invalid escape sequence '\m' /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/docstring_parser.py:308: SyntaxWarning: invalid escape sequence '\w' if re.compile('^([\w., ]+=)?\s*[\w\.]+\(.*\)$').match(summary_str): /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/docstring_parser.py:352: SyntaxWarning: invalid escape sequence '\*' return [self['Signature'].replace('*', '\*')] + [''] :308: SyntaxWarning: invalid escape sequence '\w' :352: SyntaxWarning: invalid escape sequence '\*' Generating docs for dipy: -> dipy Generating docs for dipy.align: -> dipy.align -> dipy.align._public /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/_public.py 718 -> dipy.align.cpd -> dipy.align.imaffine -> dipy.align.imwarp -> dipy.align.metrics -> dipy.align.reslice -> dipy.align.scalespace -> dipy.align.streamlinear -> dipy.align.streamwarp Generating docs for dipy.boots: -> dipy.boots WARNING: Empty - dipy.boots Generating docs for dipy.core: -> dipy.core WARNING: Empty - dipy.core -> dipy.core.geometry -> dipy.core.gradients -> dipy.core.graph -> dipy.core.histeq -> dipy.core.ndindex -> dipy.core.onetime -> dipy.core.optimize -> dipy.core.profile -> dipy.core.rng -> dipy.core.sphere -> dipy.core.sphere_stats -> dipy.core.subdivide_octahedron -> dipy.core.wavelet Generating docs for dipy.data: -> dipy.data -> dipy.data.fetcher Generating docs for dipy.denoise: -> dipy.denoise WARNING: Empty - dipy.denoise -> dipy.denoise.adaptive_soft_matching -> dipy.denoise.gibbs -> dipy.denoise.localpca -> dipy.denoise.nlmeans -> dipy.denoise.noise_estimate -> dipy.denoise.non_local_means -> dipy.denoise.patch2self Generating docs for dipy.direction: -> dipy.direction WARNING: Empty - dipy.direction -> dipy.direction.peaks Generating docs for dipy.io: -> dipy.io WARNING: Empty - dipy.io -> dipy.io.bvectxt -> dipy.io.dpy -> dipy.io.gradients -> dipy.io.image -> dipy.io.peaks -> dipy.io.pickles -> dipy.io.stateful_tractogram -> dipy.io.streamline -> dipy.io.utils -> dipy.io.vtk Generating docs for dipy.nn: -> dipy.nn WARNING: Empty - dipy.nn -> dipy.nn.cnn_1d_denoising -> dipy.nn.evac -> dipy.nn.histo_resdnn -> dipy.nn.model -> dipy.nn.synb0 -> dipy.nn.utils Generating docs for dipy.reconst: -> dipy.reconst WARNING: Empty - dipy.reconst -> dipy.reconst.base -> dipy.reconst.cache -> dipy.reconst.cross_validation -> dipy.reconst.csdeconv -> dipy.reconst.cti -> dipy.reconst.dki -> dipy.reconst.dki_micro -> dipy.reconst.dsi -> dipy.reconst.dti -> dipy.reconst.forecast -> dipy.reconst.fwdti -> dipy.reconst.gqi -> dipy.reconst.ivim -> dipy.reconst.mapmri -> dipy.reconst.mcsd -> dipy.reconst.msdki -> dipy.reconst.multi_voxel -> dipy.reconst.odf -> dipy.reconst.qtdmri -> dipy.reconst.qti -> dipy.reconst.rumba -> dipy.reconst.sfm -> dipy.reconst.shm -> dipy.reconst.shore -> dipy.reconst.utils Generating docs for dipy.segment: -> dipy.segment WARNING: Empty - dipy.segment -> dipy.segment.bundles -> dipy.segment.clustering -> dipy.segment.fss -> dipy.segment.mask -> dipy.segment.metric -> dipy.segment.threshold -> dipy.segment.tissue Generating docs for dipy.sims: -> dipy.sims WARNING: Empty - dipy.sims -> dipy.sims.phantom -> dipy.sims.voxel Generating docs for dipy.stats: -> dipy.stats WARNING: Empty - dipy.stats -> dipy.stats.analysis Generating docs for dipy.tracking: -> dipy.tracking WARNING: Empty - dipy.tracking -> dipy.tracking._utils WARNING: Empty - dipy.tracking._utils -> dipy.tracking.learning -> dipy.tracking.life -> dipy.tracking.local_tracking -> dipy.tracking.mesh -> dipy.tracking.metrics -> dipy.tracking.streamline -> dipy.tracking.utils Generating docs for dipy.version: -> dipy.version WARNING: Empty - dipy.version Generating docs for dipy.viz: -> dipy.viz WARNING: Empty - dipy.viz -> dipy.viz.gmem -> dipy.viz.horizon WARNING: Empty - dipy.viz.horizon -> dipy.viz.horizon.app -> dipy.viz.horizon.tab WARNING: Empty - dipy.viz.horizon.tab -> dipy.viz.horizon.tab.base -> dipy.viz.horizon.tab.cluster -> dipy.viz.horizon.tab.peak -> dipy.viz.horizon.tab.roi -> dipy.viz.horizon.tab.slice -> dipy.viz.horizon.util -> dipy.viz.horizon.visualizer WARNING: Empty - dipy.viz.horizon.visualizer -> dipy.viz.horizon.visualizer.cluster -> dipy.viz.horizon.visualizer.slice -> dipy.viz.panel -> dipy.viz.plotting -> dipy.viz.projections -> dipy.viz.regtools -> dipy.viz.streamline Generating docs for dipy.workflows: -> dipy.workflows WARNING: Empty - dipy.workflows -> dipy.workflows.align -> dipy.workflows.base -> dipy.workflows.cli -> dipy.workflows.combined_workflow -> dipy.workflows.denoise -> dipy.workflows.docstring_parser -> dipy.workflows.flow_runner -> dipy.workflows.io -> dipy.workflows.mask -> dipy.workflows.multi_io -> dipy.workflows.nn -> dipy.workflows.reconst -> dipy.workflows.segment -> dipy.workflows.stats -> dipy.workflows.tracking -> dipy.workflows.viz -> dipy.workflows.workflow 17 files written tools/docgen_cmd.py dipy reference_cmd /<>/.pybuild/cpython3_3.12_dipy/build/dipy/viz/__init__.py:22: UserWarning: You do not have FURY installed. Therefore, 3D visualization functions will not work for you. Please install or upgrade FURY using pip install -U furyFor detailed installation instructions visit: https://fury.gl/ warnings.warn( WARNING:root:This model requires Tensorflow. Please install these packages using pip. If using mac, please refer to this link for installation. https://github.com/apple/tensorflow_macos Generating docs for: dipy_align_affine (ImageRegistrationFlow) Done Generating docs for: dipy_align_syn (SynRegistrationFlow) Done Generating docs for: dipy_apply_transform (ApplyTransformFlow) Done Generating docs for: dipy_buan_lmm (LinearMixedModelsFlow) Done Generating docs for: dipy_buan_shapes (BundleShapeAnalysis) Done Generating docs for: dipy_buan_profiles (BundleAnalysisTractometryFlow) Done Generating docs for: dipy_bundlewarp (BundleWarpFlow) Done Generating docs for: dipy_correct_motion (MotionCorrectionFlow) Done Generating docs for: dipy_denoise_nlmeans (NLMeansFlow) Done Generating docs for: dipy_denoise_lpca (LPCAFlow) Done Generating docs for: dipy_denoise_mppca (MPPCAFlow) Done Generating docs for: dipy_denoise_patch2self (Patch2SelfFlow) Done Generating docs for: dipy_evac_plus (EVACPlusFlow) Done Generating docs for: dipy_fetch (FetchFlow) Done Generating docs for: dipy_fit_csa (ReconstCSAFlow) Done Generating docs for: dipy_fit_csd (ReconstCSDFlow) Done Generating docs for: dipy_fit_dki (ReconstDkiFlow) Done Generating docs for: dipy_fit_dti (ReconstDtiFlow) Done Generating docs for: dipy_fit_ivim (ReconstIvimFlow) Done Generating docs for: dipy_fit_mapmri (ReconstMAPMRIFlow) Done Generating docs for: dipy_mask (MaskFlow) Done Generating docs for: dipy_gibbs_ringing (GibbsRingingFlow) Done Generating docs for: dipy_horizon (HorizonFlow) Done Generating docs for: dipy_info (IoInfoFlow) Done Generating docs for: dipy_labelsbundles (LabelsBundlesFlow) Done Generating docs for: dipy_median_otsu (MedianOtsuFlow) Done Generating docs for: dipy_recobundles (RecoBundlesFlow) Done Generating docs for: dipy_reslice (ResliceFlow) Done Generating docs for: dipy_snr_in_cc (SNRinCCFlow) Done Generating docs for: dipy_split (SplitFlow) Done Generating docs for: dipy_track (LocalFiberTrackingPAMFlow) Done Generating docs for: dipy_track_pft (PFTrackingPAMFlow) Done Generating docs for: dipy_slr (SlrWithQbxFlow) Done Generating index.rst Done Build API docs...done. # Standard html build after examples have been prepared sphinx-build -b html -d _build/doctrees -D today="February 12, 2024" . _build/html Running Sphinx v7.2.6 Initializing Examples folder revamp plugin... Initializing GitHub plugin making output directory... done [autosummary] generating autosummary for: api_changes.rst, cite.rst, devel/benchmarking.rst, devel/coding_style_guideline.rst, devel/commit_codes.rst, devel/gitwash/configure_git.rst, devel/gitwash/development_workflow.rst, devel/gitwash/dot2_dot3.rst, devel/gitwash/following_latest.rst, devel/gitwash/forking_hell.rst, ..., theory/sh_basis.rst, theory/spherical.rst, user_guide/data.rst, user_guide/dataset_list.rst, user_guide/dependencies.rst, user_guide/getting_started.rst, user_guide/index.rst, user_guide/installation.rst, user_guide/introduction.rst, user_guide/mission.rst WARNING:root:This model requires Tensorflow. Please install these packages using pip. If using mac, please refer to this link for installation. https://github.com/apple/tensorflow_macos WARNING:root:This model requires Tensorflow. Please install these packages using pip. If using mac, please refer to this link for installation. https://github.com/apple/tensorflow_macos WARNING:root:This model requires Tensorflow and Tensorflow -addons. Please install these packages using pip. If using mac, please refer to this link for installation. https://github.com/apple/tensorflow_macos /<>/.pybuild/cpython3_3.12_dipy/build/dipy/viz/__init__.py:22: UserWarning: You do not have FURY installed. Therefore, 3D visualization functions will not work for you. Please install or upgrade FURY using pip install -U furyFor detailed installation instructions visit: https://fury.gl/ warnings.warn( building [mo]: targets for 0 po files that are out of date writing output... building [html]: targets for 133 source files that are out of date updating environment: [new config] 133 added, 0 changed, 0 removed reading sources... [ 1%] api_changes reading sources... [ 2%] cite reading sources... [ 2%] devel/benchmarking reading sources... 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[ 41%] reference/dipy.reconst :19: SyntaxWarning: invalid escape sequence '\m' :57: SyntaxWarning: invalid escape sequence '\m' :91: SyntaxWarning: invalid escape sequence '\m' :137: SyntaxWarning: invalid escape sequence '\m' :187: SyntaxWarning: invalid escape sequence '\m' :222: SyntaxWarning: invalid escape sequence '\m' :280: SyntaxWarning: invalid escape sequence '\m' :323: SyntaxWarning: invalid escape sequence '\e' :395: SyntaxWarning: invalid escape sequence '\m' :761: SyntaxWarning: invalid escape sequence '\l' :783: SyntaxWarning: invalid escape sequence '\m' :805: SyntaxWarning: invalid escape sequence '\m' :827: SyntaxWarning: invalid escape sequence '\m' :863: SyntaxWarning: invalid escape sequence '\l' :886: SyntaxWarning: invalid escape sequence '\m' :909: SyntaxWarning: invalid escape sequence '\m' :934: SyntaxWarning: invalid escape sequence '\m' :953: SyntaxWarning: invalid escape sequence '\l' :979: SyntaxWarning: invalid escape sequence '\s' :998: SyntaxWarning: invalid escape sequence '\m' :1036: SyntaxWarning: invalid escape sequence '\m' :1061: SyntaxWarning: invalid escape sequence '\m' :1086: SyntaxWarning: invalid escape sequence '\m' :2: SyntaxWarning: invalid escape sequence '\m' :2: SyntaxWarning: invalid escape sequence '\m' :2: SyntaxWarning: invalid escape sequence '\m' :2: SyntaxWarning: invalid escape sequence '\m' :2: SyntaxWarning: invalid escape sequence '\m' :2: SyntaxWarning: invalid escape sequence '\m' :2: SyntaxWarning: invalid escape sequence '\m' :2: SyntaxWarning: invalid escape sequence '\e' :2: SyntaxWarning: invalid escape sequence '\m' :4: SyntaxWarning: invalid escape sequence '\m' :4: SyntaxWarning: invalid escape sequence '\l' :4: SyntaxWarning: invalid escape sequence '\m' :4: SyntaxWarning: invalid escape sequence '\m' :4: SyntaxWarning: invalid escape sequence '\s' :4: SyntaxWarning: invalid escape sequence '\m' :4: SyntaxWarning: invalid escape sequence '\m' :4: SyntaxWarning: invalid escape sequence '\m' :4: SyntaxWarning: invalid escape sequence '\l' :4: SyntaxWarning: invalid escape sequence '\l' :4: SyntaxWarning: invalid escape sequence '\m' :4: SyntaxWarning: invalid escape sequence '\m' :4: SyntaxWarning: invalid escape sequence '\m' :4: SyntaxWarning: invalid escape sequence '\m' :2: SyntaxWarning: invalid escape sequence '\m' :2: SyntaxWarning: invalid escape sequence '\m' :2: SyntaxWarning: invalid escape sequence '\m' :2: SyntaxWarning: invalid escape sequence '\m' :2: SyntaxWarning: invalid escape sequence '\m' :2: SyntaxWarning: invalid escape sequence '\m' :2: SyntaxWarning: invalid escape sequence '\m' :2: SyntaxWarning: invalid escape sequence '\e' :2: SyntaxWarning: invalid escape sequence '\m' reading sources... [ 41%] reference/dipy.segment reading sources... [ 42%] reference/dipy.sims reading sources... [ 43%] reference/dipy.stats reading sources... [ 44%] reference/dipy.tracking reading sources... [ 44%] reference/dipy.version reading sources... [ 45%] reference/dipy.viz reading sources... [ 46%] reference/dipy.workflows :308: SyntaxWarning: invalid escape sequence '\w' :352: SyntaxWarning: invalid escape sequence '\*' reading sources... [ 47%] reference/index reading sources... [ 47%] reference_cmd/dipy_align_affine reading sources... [ 48%] reference_cmd/dipy_align_syn reading sources... [ 49%] reference_cmd/dipy_apply_transform reading sources... [ 50%] reference_cmd/dipy_buan_lmm reading sources... [ 50%] reference_cmd/dipy_buan_profiles reading sources... [ 51%] reference_cmd/dipy_buan_shapes reading sources... [ 52%] reference_cmd/dipy_bundlewarp reading sources... [ 53%] reference_cmd/dipy_correct_motion reading sources... [ 53%] reference_cmd/dipy_denoise_lpca reading sources... [ 54%] reference_cmd/dipy_denoise_mppca reading sources... [ 55%] reference_cmd/dipy_denoise_nlmeans reading sources... [ 56%] reference_cmd/dipy_denoise_patch2self reading sources... [ 56%] reference_cmd/dipy_evac_plus reading sources... [ 57%] reference_cmd/dipy_fetch reading sources... [ 58%] reference_cmd/dipy_fit_csa reading sources... [ 59%] reference_cmd/dipy_fit_csd reading sources... [ 59%] reference_cmd/dipy_fit_dki reading sources... [ 60%] reference_cmd/dipy_fit_dti reading sources... [ 61%] reference_cmd/dipy_fit_ivim reading sources... [ 62%] reference_cmd/dipy_fit_mapmri reading sources... [ 62%] reference_cmd/dipy_gibbs_ringing reading sources... [ 63%] reference_cmd/dipy_horizon reading sources... [ 64%] reference_cmd/dipy_info reading sources... [ 65%] reference_cmd/dipy_labelsbundles reading sources... [ 65%] reference_cmd/dipy_mask reading sources... [ 66%] reference_cmd/dipy_median_otsu reading sources... [ 67%] reference_cmd/dipy_recobundles reading sources... [ 68%] reference_cmd/dipy_reslice reading sources... [ 68%] reference_cmd/dipy_slr reading sources... [ 69%] reference_cmd/dipy_snr_in_cc reading sources... [ 70%] reference_cmd/dipy_split reading sources... [ 71%] reference_cmd/dipy_track reading sources... [ 71%] reference_cmd/dipy_track_pft reading sources... [ 72%] reference_cmd/index reading sources... [ 73%] release_notes/release0.10 reading sources... [ 74%] release_notes/release0.11 reading sources... [ 74%] release_notes/release0.12 reading sources... [ 75%] release_notes/release0.13 reading sources... [ 76%] release_notes/release0.14 reading sources... [ 77%] release_notes/release0.15 reading sources... [ 77%] release_notes/release0.16 reading sources... [ 78%] release_notes/release0.6 reading sources... [ 79%] release_notes/release0.7 reading sources... [ 80%] release_notes/release0.8 reading sources... [ 80%] release_notes/release0.9 reading sources... [ 81%] release_notes/release1.0 reading sources... [ 82%] release_notes/release1.1 reading sources... [ 83%] release_notes/release1.2 reading sources... [ 83%] release_notes/release1.3 reading sources... [ 84%] release_notes/release1.4 reading sources... [ 85%] release_notes/release1.4.1 reading sources... [ 86%] release_notes/release1.5 reading sources... [ 86%] release_notes/release1.6 reading sources... [ 87%] release_notes/release1.7 reading sources... [ 88%] release_notes/release1.8 reading sources... [ 89%] stateoftheart reading sources... [ 89%] subscribe reading sources... [ 90%] theory/b_and_q reading sources... [ 91%] theory/bmatrix reading sources... [ 92%] theory/gqi reading sources... [ 92%] theory/index reading sources... [ 93%] theory/sh_basis reading sources... [ 94%] theory/spherical reading sources... [ 95%] user_guide/data reading sources... [ 95%] user_guide/dataset_list reading sources... [ 96%] user_guide/dependencies reading sources... [ 97%] user_guide/getting_started reading sources... [ 98%] user_guide/index reading sources... [ 98%] user_guide/installation reading sources... [ 99%] user_guide/introduction reading sources... [100%] user_guide/mission /<>/doc/api_changes.rst:16: ERROR: Unexpected indentation. /<>/doc/api_changes.rst:19: WARNING: Block quote ends without a blank line; unexpected unindent. ../benchmarks/README.rst:18: WARNING: Title underline too short. Getting Started 🏃‍♂️ ------------------ ../benchmarks/README.rst:18: WARNING: Title underline too short. Getting Started 🏃‍♂️ ------------------ /<>/doc/devel/benchmarking.rst:: ERROR: Anonymous hyperlink mismatch: 1 references but 0 targets. See "backrefs" attribute for IDs. links_names.inc:81: WARNING: Duplicate explicit target name: "cython". /<>/doc/devel/index.rst:6: WARNING: toctree contains reference to nonexisting document 'devel/installing_from_source' /<>/doc/devel/make_release.rst:123: ERROR: Unexpected indentation. /<>/doc/gimbal_lock.rst:27: WARNING: image file not readable: images/spitfire_0.png /<>/doc/gimbal_lock.rst:32: WARNING: image file not readable: images/spitfire_x.png /<>/doc/gimbal_lock.rst:37: WARNING: image file not readable: images/spitfire_y.png /<>/doc/gimbal_lock.rst:42: WARNING: image file not readable: images/spitfire_hoped.png /<>/doc/index.rst:156: WARNING: toctree contains reference to nonexisting document 'examples_built/index' /<>/doc/interfaces/buan_flow.rst:290: WARNING: duplicate citation Garyfallidis14, other instance in /<>/doc/interfaces/basic_flow.rst /<>/doc/interfaces/bundle_segmentation_flow.rst:118: WARNING: duplicate citation Yeh18, other instance in /<>/doc/interfaces/buan_flow.rst /<>/doc/interfaces/bundle_segmentation_flow.rst:128: WARNING: duplicate citation Garyfallidis14, other instance in /<>/doc/interfaces/buan_flow.rst /<>/doc/interfaces/bundlewarp_registration_flow.rst:52: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/doc/interfaces/bundlewarp_registration_flow.rst:113: WARNING: duplicate citation Garyfallidis14, other instance in /<>/doc/interfaces/bundle_segmentation_flow.rst /<>/doc/interfaces/denoise_flow.rst:62: ERROR: Error in "image" directive: no content permitted. image:: https://github.com/dipy/dipy_data/blob/master/stanford_hardi_original.png?raw=true :align: middle /<>/doc/interfaces/denoise_flow.rst:62: WARNING: Substitution definition "image1" empty or invalid. .. |image1| image:: https://github.com/dipy/dipy_data/blob/master/stanford_hardi_original.png?raw=true :align: middle /<>/doc/interfaces/denoise_flow.rst:65: ERROR: Error in "image" directive: no content permitted. image:: https://github.com/dipy/dipy_data/blob/master/stanford_hardi_denoise_LPCA.png?raw=true :align: middle /<>/doc/interfaces/denoise_flow.rst:65: WARNING: Substitution definition "image2" empty or invalid. .. |image2| image:: https://github.com/dipy/dipy_data/blob/master/stanford_hardi_denoise_LPCA.png?raw=true :align: middle /<>/doc/interfaces/denoise_flow.rst:142: WARNING: Literal block expected; none found. /<>/doc/interfaces/denoise_flow.rst:72: ERROR: Undefined substitution referenced: "image1". /<>/doc/interfaces/denoise_flow.rst:72: ERROR: Undefined substitution referenced: "image2". /<>/doc/interfaces/registration_flow.rst:106: WARNING: Inline emphasis start-string without end-string. /<>/doc/interfaces/registration_flow.rst:163: WARNING: duplicate citation Garyfallidis15, other instance in /<>/doc/interfaces/bundle_segmentation_flow.rst /<>/doc/interfaces/tracking_flow.rst:204: WARNING: duplicate citation Garyfallidis12, other instance in /<>/doc/interfaces/basic_flow.rst /<>/doc/recipes.rst:31: WARNING: Inline emphasis start-string without end-string. /<>/doc/recipes.rst:41: WARNING: Inline emphasis start-string without end-string. /<>/doc/reconstruction_models_list.rst:: ERROR: Anonymous hyperlink mismatch: 1 references but 0 targets. See "backrefs" attribute for IDs. /<>/doc/reference/dipy.align.rst:39::1: WARNING: Inline strong start-string without end-string. /<>/doc/reference/dipy.align.rst:73::1: WARNING: Inline strong start-string without end-string. WARNING: Failed to get a function signature for dipy.align.VerbosityLevels: is not a callable object /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/_public.py:docstring of dipy.align._public.write_mapping:7: ERROR: Unexpected indentation. WARNING: Failed to get a function signature for dipy.align._public._METHOD_DICT: {'center_of_mass': (functools.partial(, pipeline=['center_of_mass']), None), 'translation': (functools.partial(, pipeline=['translation']), ), 'rigid_isoscaling': (functools.partial(, pipeline=['rigid_isoscaling']), ), 'rigid_scaling': (functools.partial(, pipeline=['rigid_scaling']), ), 'rigid': (functools.partial(, pipeline=['rigid']), ), 'affine': (functools.partial(, pipeline=['affine']), )} is not a callable object /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/_public.py:docstring of dipy.align._public._METHOD_DICT:3: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/_public.py:docstring of dipy.align._public._METHOD_DICT:4: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/_public.py:docstring of dipy.align._public._METHOD_DICT:7: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/_public.py:docstring of dipy.align._public._METHOD_DICT:8: WARNING: Inline strong start-string without end-string. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/imaffine.py:docstring of dipy.align.imaffine.AffineMap.transform:37: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/imaffine.py:docstring of dipy.align.imaffine.AffineMap.transform_inverse:37: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/imaffine.py:docstring of dipy.align.imaffine.AffineRegistration.optimize:38: WARNING: Definition list ends without a blank line; unexpected unindent. WARNING: Failed to get a function signature for dipy.align.imaffine._transform_method: {(2, 'nearest'): , (3, 'nearest'): , (2, 'linear'): , (3, 'linear'): } is not a callable object /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/imaffine.py:docstring of dipy.align.imaffine._transform_method:3: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/imaffine.py:docstring of dipy.align.imaffine._transform_method:4: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/imaffine.py:docstring of dipy.align.imaffine._transform_method:7: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/imaffine.py:docstring of dipy.align.imaffine._transform_method:8: WARNING: Inline strong start-string without end-string. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/imwarp.py:docstring of dipy.align.imwarp.SymmetricDiffeomorphicRegistration.update:29: WARNING: Definition list ends without a blank line; unexpected unindent. WARNING: Failed to get a function signature for dipy.align.imwarp.RegistrationStages: is not a callable object WARNING: Failed to get a function signature for dipy.align.imwarp.logger: is not a callable object /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/metrics.py:docstring of dipy.align.metrics.v_cycle_3d:9: ERROR: Unexpected indentation. WARNING: Failed to get a function signature for dipy.align.scalespace.logger: is not a callable object /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineLinearRegistration.__init__:50: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineLinearRegistration.__init__:51: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineLinearRegistration.__init__:79: WARNING: Duplicate explicit target name: "garyfallidis14". WARNING: Failed to get a function signature for dipy.align.streamlinear.logger: is not a callable object /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.progressive_slr:18: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.progressive_slr:20: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.progressive_slr:37: WARNING: Duplicate explicit target name: "garyfallidis15". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.slr_with_qbx:62: WARNING: Duplicate explicit target name: "garyfallidis15". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.slr_with_qbx:63: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.slr_with_qbx:66: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.slr_with_qbx:67: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.slr_with_qbx:67: WARNING: Duplicate explicit target name: "garyfallidis17". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.slr_with_qbx:68: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.groupwise_slr:43: WARNING: Duplicate explicit target name: "garyfallidis15". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.groupwise_slr:44: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.groupwise_slr:47: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.groupwise_slr:48: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.groupwise_slr:48: WARNING: Duplicate explicit target name: "garyfallidis17". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.groupwise_slr:49: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamwarp.py:docstring of dipy.align.streamwarp.bundlewarp_vector_filed:19: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineDistanceMetric.__init__:9: ERROR: Undefined substitution referenced: "num_threads + 1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineDistanceMetric.__init__:9: ERROR: Undefined substitution referenced: "num_threads + 1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineDistanceMetric.__init__:9: ERROR: Undefined substitution referenced: "num_threads + 1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineDistanceMetric.__init__:9: ERROR: Undefined substitution referenced: "num_threads + 1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineDistanceMetric.__init__:9: ERROR: Undefined substitution referenced: "num_threads + 1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineDistanceMetric.__init__:9: ERROR: Undefined substitution referenced: "num_threads + 1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineLinearRegistration.__init__:66: ERROR: Undefined substitution referenced: "num_threads + 1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.bundle_min_distance_fast:32: ERROR: Undefined substitution referenced: "num_threads + 1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.progressive_slr:28: ERROR: Undefined substitution referenced: "num_threads + 1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.slr_with_qbx:47: ERROR: Undefined substitution referenced: "num_threads + 1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.BundleMinDistanceMetric:12: WARNING: duplicate citation Garyfallidis14, other instance in /<>/doc/interfaces/bundlewarp_registration_flow.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineLinearRegistration.__init__:75: WARNING: duplicate citation Garyfallidis15, other instance in /<>/doc/interfaces/registration_flow.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineLinearRegistration.__init__:79: WARNING: duplicate citation Garyfallidis14, other instance in /<>/doc/reference/dipy.align.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineLinearRegistration.__init__:82: WARNING: duplicate citation Garyfallidis17, other instance in /<>/doc/interfaces/bundle_segmentation_flow.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.progressive_slr:37: WARNING: duplicate citation Garyfallidis15, other instance in /<>/doc/reference/dipy.align.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.slr_with_qbx:62: WARNING: duplicate citation Garyfallidis15, other instance in /<>/doc/reference/dipy.align.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.slr_with_qbx:67: WARNING: duplicate citation Garyfallidis17, other instance in /<>/doc/reference/dipy.align.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.groupwise_slr:43: WARNING: duplicate citation Garyfallidis15, other instance in /<>/doc/reference/dipy.align.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.groupwise_slr:48: WARNING: duplicate citation Garyfallidis17, other instance in /<>/doc/reference/dipy.align.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/align/streamwarp.py:docstring of dipy.align.streamwarp.bundlewarp:49: WARNING: duplicate citation Chandio2023, other instance in /<>/doc/interfaces/bundlewarp_registration_flow.rst /<>/doc/reference/dipy.core.rst:42::1: WARNING: Inline strong start-string without end-string. WARNING: Failed to get a function signature for dipy.core.geometry._TUPLE2AXES: {(0, 0, 0, 0): 'sxyz', (0, 0, 1, 0): 'sxyx', (0, 1, 0, 0): 'sxzy', (0, 1, 1, 0): 'sxzx', (1, 0, 0, 0): 'syzx', (1, 0, 1, 0): 'syzy', (1, 1, 0, 0): 'syxz', (1, 1, 1, 0): 'syxy', (2, 0, 0, 0): 'szxy', (2, 0, 1, 0): 'szxz', (2, 1, 0, 0): 'szyx', (2, 1, 1, 0): 'szyz', (0, 0, 0, 1): 'rzyx', (0, 0, 1, 1): 'rxyx', (0, 1, 0, 1): 'ryzx', (0, 1, 1, 1): 'rxzx', (1, 0, 0, 1): 'rxzy', (1, 0, 1, 1): 'ryzy', (1, 1, 0, 1): 'rzxy', (1, 1, 1, 1): 'ryxy', (2, 0, 0, 1): 'ryxz', (2, 0, 1, 1): 'rzxz', (2, 1, 0, 1): 'rxyz', (2, 1, 1, 1): 'rzyz'} is not a callable object /<>/.pybuild/cpython3_3.12_dipy/build/dipy/core/geometry.py:docstring of dipy.core.geometry._TUPLE2AXES:3: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/core/geometry.py:docstring of dipy.core.geometry._TUPLE2AXES:4: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/core/geometry.py:docstring of dipy.core.geometry._TUPLE2AXES:7: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/core/geometry.py:docstring of dipy.core.geometry._TUPLE2AXES:8: WARNING: Inline strong start-string without end-string. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/core/geometry.py:docstring of dipy.core.geometry.perpendicular_directions:32: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/core/geometry.py:docstring of dipy.core.geometry.perpendicular_directions:34: WARNING: Bullet list ends without a blank line; unexpected unindent. WARNING: Failed to get a function signature for dipy.core.gradients.logger: is not a callable object /<>/.pybuild/cpython3_3.12_dipy/build/dipy/core/gradients.py:docstring of dipy.core.gradients.gradient_table_from_bvals_bvecs:41: WARNING: Inline strong start-string without end-string. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/core/gradients.py:docstring of dipy.core.gradients.reorient_bvecs:19: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/core/gradients.py:docstring of dipy.core.gradients.params_to_btens:23: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/core/gradients.py:docstring of dipy.core.gradients.params_to_btens:24: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/core/optimize.py:docstring of dipy.core.optimize.Optimizer.__init__:61: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/core/optimize.py:docstring of dipy.core.optimize.Optimizer.__init__:69: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/core/optimize.py:docstring of dipy.core.optimize.Optimizer.__init__:84: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/core/optimize.py:docstring of dipy.core.optimize.Optimizer.__init__:88: WARNING: Block quote ends without a blank line; unexpected unindent. WARNING: Failed to get a function signature for dipy.core.sphere.octahedron_vertices: array([[ 1., 0., 0.], [-1., 0., 0.], [ 0., 1., 0.], [ 0., -1., 0.], [ 0., 0., 1.], [ 0., 0., -1.]]) is not a callable object /<>/.pybuild/cpython3_3.12_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.octahedron_vertices:84: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.octahedron_vertices:85: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.octahedron_vertices:87: ERROR: Unexpected indentation. WARNING: Failed to get a function signature for dipy.core.sphere.octahedron_faces: array([[0, 4, 2], [1, 5, 3], [4, 2, 1], [5, 3, 0], [1, 4, 3], [0, 5, 2], [0, 4, 3], [1, 5, 2]], dtype=uint16) is not a callable object /<>/.pybuild/cpython3_3.12_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.octahedron_faces:84: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.octahedron_faces:85: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.octahedron_faces:87: ERROR: Unexpected indentation. WARNING: Failed to get a function signature for dipy.core.sphere.icosahedron_vertices: array([[ 0.85065081, 0.52573111, 0. ], [-0.85065081, 0.52573111, 0. ], [ 0.85065081, -0.52573111, 0. ], [-0.85065081, -0.52573111, 0. ], [ 0.52573111, 0. , 0.85065081], [ 0.52573111, 0. , -0.85065081], [-0.52573111, 0. , 0.85065081], [-0.52573111, 0. , -0.85065081], [ 0. , 0.85065081, 0.52573111], [ 0. , -0.85065081, 0.52573111], [ 0. , 0.85065081, -0.52573111], [ 0. , -0.85065081, -0.52573111]]) is not a callable object /<>/.pybuild/cpython3_3.12_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.icosahedron_vertices:84: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.icosahedron_vertices:85: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.icosahedron_vertices:87: ERROR: Unexpected indentation. WARNING: Failed to get a function signature for dipy.core.sphere.icosahedron_faces: array([[ 8, 4, 0], [ 2, 5, 0], [ 2, 5, 11], [ 9, 2, 11], [ 2, 4, 0], [ 9, 2, 4], [10, 8, 1], [10, 8, 0], [10, 5, 0], [ 6, 3, 1], [ 9, 6, 3], [ 6, 8, 1], [ 6, 8, 4], [ 9, 6, 4], [ 7, 10, 1], [ 7, 10, 5], [ 7, 3, 1], [ 7, 3, 11], [ 9, 3, 11], [ 7, 5, 11]], dtype=uint16) is not a callable object /<>/.pybuild/cpython3_3.12_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.icosahedron_faces:84: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.icosahedron_faces:85: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.icosahedron_faces:87: ERROR: Unexpected indentation. WARNING: Failed to get a function signature for dipy.core.sphere.unit_octahedron: is not a callable object WARNING: Failed to get a function signature for dipy.core.sphere.unit_icosahedron: is not a callable object WARNING: Failed to get a function signature for dipy.core.sphere.hemi_icosahedron: is not a callable object /<>/.pybuild/cpython3_3.12_dipy/build/dipy/core/optimize.py:docstring of dipy.core.optimize.PositiveDefiniteLeastSquares.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.data.rst:107::1: WARNING: Inline interpreted text or phrase reference start-string without end-string. WARNING: Failed to get a function signature for dipy.data.DATA_DIR: '/<>/.pybuild/cpython3_3.12_dipy/build/dipy/data/files' is not a callable object WARNING: Failed to get a function signature for dipy.data.default_sphere: is not a callable object WARNING: Failed to get a function signature for dipy.data.small_sphere: is not a callable object /<>/.pybuild/cpython3_3.12_dipy/build/dipy/data/fetcher.py:docstring of dipy.data.fetcher.fetch_data:15: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/data/fetcher.py:docstring of dipy.data.fetcher._make_fetcher..fetcher:10: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/data/fetcher.py:docstring of dipy.data.fetcher.read_qtdMRI_test_retest_2subjects:1: WARNING: Inline interpreted text or phrase reference start-string without end-string. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/data/fetcher.py:docstring of dipy.data.fetcher.read_mni_template:34: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/data/fetcher.py:docstring of dipy.data.fetcher.read_mni_template:39: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/data/fetcher.py:docstring of dipy.data.fetcher.fetch_hcp:42: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/data/fetcher.py:docstring of dipy.data.fetcher.fetch_hbn:20: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/data/fetcher.py:docstring of dipy.data.fetcher.fetch_hbn:24: WARNING: Duplicate explicit target name: "2". /<>/doc/reference/dipy.data.rst:28::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.data.rst:107::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/data/__init__.py:docstring of dipy.data.load_sdp_constraints:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/data/fetcher.py:docstring of dipy.data.fetcher.fetch_hcp:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/adaptive_soft_matching.py:docstring of dipy.denoise.adaptive_soft_matching.adaptive_soft_matching:10: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/adaptive_soft_matching.py:docstring of dipy.denoise.adaptive_soft_matching.adaptive_soft_matching:12: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/gibbs.py:docstring of dipy.denoise.gibbs.gibbs_removal:38: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/gibbs.py:docstring of dipy.denoise.gibbs.gibbs_removal:40: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.dimensionality_problem_message:5: CRITICAL: Unexpected section title. Parameters ---------- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.dimensionality_problem_message:12: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.dimensionality_problem_message:14: CRITICAL: Unexpected section title. Returns ------- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.genpca:56: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.localpca:63: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.localpca:67: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.mppca:40: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.mppca:44: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/nlmeans.py:docstring of dipy.denoise.nlmeans.nlmeans:7: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/nlmeans.py:docstring of dipy.denoise.nlmeans.nlmeans:9: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/nlmeans.py:docstring of dipy.denoise.nlmeans.nlmeans:10: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/noise_estimate.py:docstring of dipy.denoise.noise_estimate.piesno:56: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/noise_estimate.py:docstring of dipy.denoise.noise_estimate.piesno:57: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/noise_estimate.py:docstring of dipy.denoise.noise_estimate.piesno:61: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/noise_estimate.py:docstring of dipy.denoise.noise_estimate.piesno:62: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/noise_estimate.py:docstring of dipy.denoise.noise_estimate.estimate_sigma:38: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/noise_estimate.py:docstring of dipy.denoise.noise_estimate.estimate_sigma:39: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/noise_estimate.py:docstring of dipy.denoise.noise_estimate.estimate_sigma:42: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/noise_estimate.py:docstring of dipy.denoise.noise_estimate.estimate_sigma:43: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/non_local_means.py:docstring of dipy.denoise.non_local_means.non_local_means:8: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/non_local_means.py:docstring of dipy.denoise.non_local_means.non_local_means:10: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/non_local_means.py:docstring of dipy.denoise.non_local_means.non_local_means:11: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/non_local_means.py:docstring of dipy.denoise.non_local_means.non_local_means:32: WARNING: Duplicate explicit target name: "coupe11". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/nlmeans.py:docstring of dipy.denoise.nlmeans.nlmeans:18: ERROR: Undefined substitution referenced: "num_threads + 1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/adaptive_soft_matching.py:docstring of dipy.denoise.adaptive_soft_matching.adaptive_soft_matching:30: WARNING: duplicate citation Coupe11, other instance in /<>/doc/interfaces/denoise_flow.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/non_local_means.py:docstring of dipy.denoise.non_local_means.non_local_means:27: WARNING: duplicate citation Coupe08, other instance in /<>/doc/interfaces/denoise_flow.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/non_local_means.py:docstring of dipy.denoise.non_local_means.non_local_means:32: WARNING: duplicate citation Coupe11, other instance in /<>/doc/reference/dipy.denoise.rst /<>/doc/reference/dipy.denoise.rst:50::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.denoise.rst:50::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.genpca:10: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.localpca:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.localpca:9: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.localpca:39: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.localpca:39: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.localpca:44: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.localpca:47: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.mppca:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.mppca:22: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/noise_estimate.py:docstring of dipy.denoise.noise_estimate.estimate_sigma:26: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/denoise/noise_estimate.py:docstring of dipy.denoise.noise_estimate.estimate_sigma:26: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/io/dpy.py:docstring of dipy.io.dpy.Dpy.__init__:7: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/io/dpy.py:docstring of dipy.io.dpy.Dpy.__init__:9: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/io/stateful_tractogram.py:docstring of dipy.io.stateful_tractogram.StatefulTractogram.from_sft:18: WARNING: Definition list ends without a blank line; unexpected unindent. WARNING: Failed to get a function signature for dipy.io.stateful_tractogram.logger: is not a callable object /<>/.pybuild/cpython3_3.12_dipy/build/dipy/io/streamline.py:docstring of dipy.io.streamline.load_generator:8: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/io/streamline.py:docstring of dipy.io.streamline.save_generator:8: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/io/utils.py:docstring of dipy.io.utils.nifti1_symmat:8: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/io/utils.py:docstring of dipy.io.utils.is_reference_info_valid:6: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/io/utils.py:docstring of dipy.io.utils.is_reference_info_valid:11: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/io/utils.py:docstring of dipy.io.utils.get_reference_info:8: WARNING: Definition list ends without a blank line; unexpected unindent. WARNING: Failed to get a function signature for dipy.nn.evac.logger: is not a callable object /<>/.pybuild/cpython3_3.12_dipy/build/dipy/nn/histo_resdnn.py:docstring of dipy.nn.histo_resdnn.HistoResDNN.__init__:28: WARNING: Duplicate explicit target name: "1". WARNING: Failed to get a function signature for dipy.nn.histo_resdnn.logger: is not a callable object /<>/.pybuild/cpython3_3.12_dipy/build/dipy/nn/synb0.py:docstring of dipy.nn.synb0.EncoderBlock:1: WARNING: duplicate object description of dipy.nn.synb0.EncoderBlock, other instance in reference/dipy.nn, use :no-index: for one of them /<>/.pybuild/cpython3_3.12_dipy/build/dipy/nn/synb0.py:docstring of dipy.nn.synb0.EncoderBlock.__init__:1: WARNING: duplicate object description of dipy.nn.synb0.EncoderBlock.__init__, other instance in reference/dipy.nn, use :no-index: for one of them /<>/.pybuild/cpython3_3.12_dipy/build/dipy/nn/synb0.py:docstring of dipy.nn.synb0.EncoderBlock.call:1: WARNING: duplicate object description of dipy.nn.synb0.EncoderBlock.call, other instance in reference/dipy.nn, use :no-index: for one of them /<>/.pybuild/cpython3_3.12_dipy/build/dipy/nn/synb0.py:docstring of dipy.nn.synb0.DecoderBlock:1: WARNING: duplicate object description of dipy.nn.synb0.DecoderBlock, other instance in reference/dipy.nn, use :no-index: for one of them /<>/.pybuild/cpython3_3.12_dipy/build/dipy/nn/synb0.py:docstring of dipy.nn.synb0.DecoderBlock.__init__:1: WARNING: duplicate object description of dipy.nn.synb0.DecoderBlock.__init__, other instance in reference/dipy.nn, use :no-index: for one of them /<>/.pybuild/cpython3_3.12_dipy/build/dipy/nn/synb0.py:docstring of dipy.nn.synb0.DecoderBlock.call:1: WARNING: duplicate object description of dipy.nn.synb0.DecoderBlock.call, other instance in reference/dipy.nn, use :no-index: for one of them /<>/.pybuild/cpython3_3.12_dipy/build/dipy/nn/synb0.py:docstring of dipy.nn.synb0.Synb0.__init__:18: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/nn/synb0.py:docstring of dipy.nn.synb0.Synb0.__init__:22: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/nn/synb0.py:docstring of dipy.nn.synb0.Synb0.predict:29: WARNING: Definition list ends without a blank line; unexpected unindent. WARNING: Failed to get a function signature for dipy.nn.synb0.logger: is not a callable object /<>/.pybuild/cpython3_3.12_dipy/build/dipy/nn/synb0.py:docstring of dipy.nn.synb0.normalize:7: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/nn/synb0.py:docstring of dipy.nn.synb0.normalize:11: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/nn/synb0.py:docstring of dipy.nn.synb0.unnormalize:7: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/nn/synb0.py:docstring of dipy.nn.synb0.unnormalize:8: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/nn/synb0.py:docstring of dipy.nn.synb0.UNet3D:1: WARNING: duplicate object description of dipy.nn.synb0.UNet3D, other instance in reference/dipy.nn, use :no-index: for one of them /<>/.pybuild/cpython3_3.12_dipy/build/dipy/nn/utils.py:docstring of dipy.nn.utils.normalize:7: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/nn/utils.py:docstring of dipy.nn.utils.normalize:11: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/nn/utils.py:docstring of dipy.nn.utils.unnormalize:7: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/nn/utils.py:docstring of dipy.nn.utils.unnormalize:8: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/doc/reference/dipy.reconst.rst:70::1: WARNING: Inline emphasis start-string without end-string. /<>/doc/reference/dipy.reconst.rst:136::1: WARNING: Inline interpreted text or phrase reference start-string without end-string. /<>/doc/reference/dipy.reconst.rst:543::1: WARNING: Inline substitution_reference start-string without end-string. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/cross_validation.py:docstring of dipy.reconst.cross_validation.coeff_of_determination:5: CRITICAL: Unexpected section title. Parameters ---------- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/cross_validation.py:docstring of dipy.reconst.cross_validation.coeff_of_determination:14: CRITICAL: Unexpected section title. Returns ------- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/cross_validation.py:docstring of dipy.reconst.cross_validation.coeff_of_determination:19: CRITICAL: Unexpected section title. Notes ----- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/cross_validation.py:docstring of dipy.reconst.cross_validation.coeff_of_determination:27: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/cross_validation.py:docstring of dipy.reconst.cross_validation.kfold_xval:39: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:19: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:24: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:44: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:48: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:51: WARNING: Duplicate explicit target name: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:53: WARNING: Duplicate explicit target name: "4". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSDTModel.__init__:20: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSDTModel.__init__:22: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSDTModel.__init__:30: WARNING: Inline emphasis start-string without end-string. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSDTModel.__init__:35: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.auto_response:12: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.auto_response:13: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.response_from_mask:13: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.response_from_mask:14: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.response_from_mask:45: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.response_from_mask:46: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.estimate_response:8: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_deconv:1: WARNING: Inline emphasis start-string without end-string. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.mask_for_response_ssst:8: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.mask_for_response_ssst:9: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.mask_for_response_ssst:34: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.mask_for_response_ssst:35: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.response_from_mask_ssst:8: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.response_from_mask_ssst:9: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.response_from_mask_ssst:40: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.response_from_mask_ssst:41: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.auto_response_ssst:8: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.auto_response_ssst:9: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.recursive_response:7: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.recursive_response:8: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.recursive_response:53: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.CorrelationTensorModel.__init__:9: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.CorrelationTensorModel.__init__:11: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.CorrelationTensorModel.predict:10: WARNING: Enumerated list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.CorrelationTensorModel.predict:14: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.CorrelationTensorFit.__init__:10: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.CorrelationTensorFit.predict:11: WARNING: Enumerated list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.multi_gaussian_k_from_c:8: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.split_cti_params:15: WARNING: Enumerated list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.cti_prediction:8: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.cti_prediction:9: WARNING: Enumerated list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.cti_prediction:13: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.ls_fit_cti:26: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisModel.__init__:11: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisModel.__init__:12: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisModel.__init__:14: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisModel.__init__:16: WARNING: Inline emphasis start-string without end-string. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisModel.__init__:16: WARNING: Inline strong start-string without end-string. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisModel.__init__:17: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisModel.__init__:23: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisModel.__init__:26: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisModel.predict:9: WARNING: Literal block expected; none found. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisModel.predict:10: WARNING: Enumerated list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.__init__:10: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.__init__:13: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.ak:48: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.ak:51: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.ak:54: WARNING: Duplicate explicit target name: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.mkt:39: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.mkt:43: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.rk:67: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.rk:70: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.rk:73: WARNING: Duplicate explicit target name: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.carlson_rf:33: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.directional_diffusion:24: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.directional_diffusion_variance:34: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.directional_kurtosis:41: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.directional_kurtosis:45: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.radial_kurtosis:8: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.radial_kurtosis:12: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.radial_kurtosis:71: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.radial_kurtosis:74: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.radial_kurtosis:77: WARNING: Duplicate explicit target name: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.axial_kurtosis:8: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.axial_kurtosis:12: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.axial_kurtosis:55: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.axial_kurtosis:58: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.axial_kurtosis:61: WARNING: Duplicate explicit target name: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.kurtosis_maximum:8: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.kurtosis_maximum:12: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.mean_kurtosis_tensor:8: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.mean_kurtosis_tensor:12: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.mean_kurtosis_tensor:21: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.mean_kurtosis_tensor:45: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.mean_kurtosis_tensor:49: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.dki_prediction:4: CRITICAL: Unexpected section title. Parameters ---------- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.dki_prediction:8: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.dki_prediction:12: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.dki_prediction:19: CRITICAL: Unexpected section title. Returns ------- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.dki_prediction:26: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.ls_fit_dki:26: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.cls_fit_dki:33: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.cls_fit_dki:40: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.split_dki_param:10: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructureModel.__init__:11: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructureModel.__init__:12: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructureModel.__init__:14: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructureModel.__init__:17: WARNING: Inline emphasis start-string without end-string. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructureModel.__init__:17: WARNING: Inline strong start-string without end-string. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructureModel.__init__:24: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructureModel.predict:10: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructureModel.predict:29: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.__init__:11: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.__init__:27: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.awf:11: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.axonal_diffusivity:6: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.hindered_ad:10: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.hindered_evals:10: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.hindered_rd:10: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.restricted_evals:10: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.tortuosity:12: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.axonal_water_fraction:8: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.axonal_water_fraction:32: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.diffusion_components:9: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.diffusion_components:40: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.dkimicro_prediction:1: WARNING: Inline interpreted text or phrase reference start-string without end-string. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumFit.rtop_pdf:19: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumFit.rtop_pdf:20: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumFit.rtop_pdf:22: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumFit.rtop_pdf:25: WARNING: Duplicate explicit target name: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumFit.rtop_pdf:26: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.create_qspace:7: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.create_qtable:7: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.hanning_filter:12: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.LR_deconv:16: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorModel.__init__:21: WARNING: Inline emphasis start-string without end-string. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorModel.__init__:21: WARNING: Inline strong start-string without end-string. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorModel.__init__:48: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorModel.__init__:51: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorModel.__init__:54: WARNING: Duplicate explicit target name: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.adc:5: CRITICAL: Unexpected section title. Parameters ---------- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.adc:9: CRITICAL: Unexpected section title. Returns ------- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.adc:15: CRITICAL: Unexpected section title. Notes ----- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.adc:21: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.linearity:17: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.planarity:17: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.sphericity:16: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.isotropic:23: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.linearity:25: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.planarity:26: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.sphericity:25: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.wls_fit_tensor:55: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.ols_fit_tensor:42: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.restore_fit_tensor:39: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.restore_fit_tensor:40: WARNING: Explicit markup ends without a blank line; unexpected unindent. WARNING: Failed to get a function signature for dipy.reconst.dti._lt_indices: array([[0, 1, 3], [1, 2, 4], [3, 4, 5]]) is not a callable object /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_indices:84: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_indices:85: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_indices:87: ERROR: Unexpected indentation. WARNING: Failed to get a function signature for dipy.reconst.dti._lt_rows: array([0, 1, 1, 2, 2, 2]) is not a callable object /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_rows:84: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_rows:85: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_rows:87: ERROR: Unexpected indentation. WARNING: Failed to get a function signature for dipy.reconst.dti._lt_cols: array([0, 0, 1, 0, 1, 2]) is not a callable object /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_cols:84: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_cols:85: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_cols:87: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.quantize_evecs:7: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/forecast.py:docstring of dipy.reconst.forecast.ForecastModel:13: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/forecast.py:docstring of dipy.reconst.forecast.ForecastModel:17: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/forecast.py:docstring of dipy.reconst.forecast.ForecastModel:21: WARNING: Duplicate explicit target name: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.FreeWaterTensorModel.__init__:7: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.FreeWaterTensorModel.__init__:15: WARNING: Inline emphasis start-string without end-string. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.FreeWaterTensorModel.__init__:15: WARNING: Inline strong start-string without end-string. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.FreeWaterTensorModel.__init__:16: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.FreeWaterTensorModel.__init__:22: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.FreeWaterTensorFit.__init__:12: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.FreeWaterTensorFit.__init__:19: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.lower_triangular_to_cholesky:17: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.cholesky_to_lower_triangular:17: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/gqi.py:docstring of dipy.reconst.gqi.GeneralizedQSamplingModel.__init__:21: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/gqi.py:docstring of dipy.reconst.gqi.GeneralizedQSamplingModel.__init__:23: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/gqi.py:docstring of dipy.reconst.gqi.GeneralizedQSamplingModel.__init__:24: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/ivim.py:docstring of dipy.reconst.ivim.IvimModelTRR.__init__:16: WARNING: Literal block expected; none found. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/ivim.py:docstring of dipy.reconst.ivim.IvimModelTRR.__init__:78: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/ivim.py:docstring of dipy.reconst.ivim.IvimModelTRR.__init__:81: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/ivim.py:docstring of dipy.reconst.ivim.IvimModelVP.__init__:17: WARNING: Literal block expected; none found. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/ivim.py:docstring of dipy.reconst.ivim.IvimModelVP.__init__:31: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/ivim.py:docstring of dipy.reconst.ivim.IvimModelVP.__init__:34: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/ivim.py:docstring of dipy.reconst.ivim.IvimModelVP.__init__:37: WARNING: Duplicate explicit target name: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/ivim.py:docstring of dipy.reconst.ivim.IvimModelVP.ivim_mix_cost_one:30: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/ivim.py:docstring of dipy.reconst.ivim.IvimModelVP.ivim_mix_cost_one:34: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel:16: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel:20: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel:24: WARNING: Duplicate explicit target name: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel:28: WARNING: Duplicate explicit target name: "4". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:94: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:98: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:103: WARNING: Duplicate explicit target name: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:107: WARNING: Duplicate explicit target name: "4". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:111: WARNING: Duplicate explicit target name: "5". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:115: WARNING: Duplicate explicit target name: "6". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.msd:8: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.msd:9: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.msd:11: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.msd:12: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng:8: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng:9: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng:12: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng:13: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_parallel:8: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_parallel:9: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_parallel:12: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_parallel:13: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_perpendicular:8: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_perpendicular:9: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_perpendicular:12: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_perpendicular:13: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.norm_of_laplacian_signal:10: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.norm_of_laplacian_signal:11: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.odf:13: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.odf:14: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.odf_sh:9: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.odf_sh:10: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.odf_sh:13: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.odf_sh:14: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.qiv:8: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.qiv:9: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.qiv:13: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.qiv:14: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtap:7: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtap:8: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtap:11: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtap:12: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtop:7: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtop:8: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtop:11: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtop:12: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtpp:7: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtpp:8: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtpp:11: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtpp:12: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.isotropic_scale_factor:15: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.isotropic_scale_factor:16: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_index_matrix:15: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_index_matrix:16: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.b_mat:15: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.b_mat:16: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.b_mat_isotropic:15: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.b_mat_isotropic:16: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_phi_1d:14: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_phi_1d:15: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_phi_matrix:14: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_phi_matrix:15: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_psi_1d:14: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_psi_1d:15: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_psi_matrix:14: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_psi_matrix:15: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_odf_matrix:17: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_odf_matrix:18: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_phi_matrix:15: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_phi_matrix:16: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_radial_signal_basis:16: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_radial_signal_basis:17: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_psi_matrix:15: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_psi_matrix:16: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_radial_pdf_basis:16: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_radial_pdf_basis:17: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_matrix:23: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_matrix:24: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_matrix:27: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_matrix:28: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_sh_matrix:23: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_sh_matrix:24: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_sh_matrix:27: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_sh_matrix:28: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_laplacian_reg_matrix:18: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_laplacian_reg_matrix:19: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_laplacian_reg_matrix_from_index_matrix:18: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_laplacian_reg_matrix_from_index_matrix:19: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_index_matrix:15: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_index_matrix:16: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.map_laplace_u:15: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.map_laplace_u:16: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.map_laplace_t:15: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.map_laplace_t:16: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.map_laplace_s:15: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.map_laplace_s:16: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_STU_reg_matrices:16: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_STU_reg_matrices:17: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_laplacian_reg_matrix:22: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_laplacian_reg_matrix:23: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.generalized_crossvalidation:23: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.MultiShellDeconvModel.__init__:19: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.MultiShellDeconvModel.__init__:30: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.MultiShellDeconvModel.__init__:44: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.MultiShellDeconvModel.__init__:47: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.MultiShellDeconvModel.__init__:51: WARNING: Duplicate explicit target name: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.multi_tissue_basis:8: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.multi_shell_fiber_response:20: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.mask_for_response_msmt:8: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.mask_for_response_msmt:9: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.response_from_mask_msmt:8: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.response_from_mask_msmt:9: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.auto_response_msmt:8: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.auto_response_msmt:9: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.msd:11: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.msk:11: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2di:16: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2di:20: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2f:16: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2f:20: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2uFA:17: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2uFA:21: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.msk_from_awf:20: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.awf_from_msk:24: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.awf_from_msk:28: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.wls_fit_msdki:33: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.msd:14: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.msd:19: WARNING: Duplicate explicit target name: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.norm_of_laplacian_signal:14: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.odf:17: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.odf:20: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.odf_sh:17: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.odf_sh:23: WARNING: Duplicate explicit target name: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.qiv:15: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.qiv:22: WARNING: Duplicate explicit target name: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.qtdmri_to_mapmri_coef:15: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtap:14: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtap:20: WARNING: Duplicate explicit target name: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtop:14: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtop:20: WARNING: Duplicate explicit target name: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtpp:14: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtpp:20: WARNING: Duplicate explicit target name: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.qtdmri_to_mapmri_matrix:20: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.qtdmri_isotropic_to_mapmri_matrix:20: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.qtdmri_laplacian_reg_matrix:8: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.qtdmri_isotropic_laplacian_reg_matrix:8: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.part23_reg_matrix_q:6: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.part23_iso_reg_matrix_q:6: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.part4_reg_matrix_q:6: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.part4_iso_reg_matrix_q:6: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.part1_reg_matrix_tau:6: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.part23_reg_matrix_tau:6: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.part4_reg_matrix_tau:6: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.generalized_crossvalidation:5: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.GCV_cost_function:5: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.qtdmri_number_of_coefficients:6: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiModel.__init__:15: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiModel.__init__:21: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiModel.__init__:24: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_c:4: CRITICAL: Unexpected section title. Returns ------- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_c:8: CRITICAL: Unexpected section title. Notes ----- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_c:14: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_m:4: CRITICAL: Unexpected section title. Returns ------- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_m:8: CRITICAL: Unexpected section title. Notes ----- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_m:14: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_m:17: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_m:18: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_m:20: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_m:22: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_md:4: CRITICAL: Unexpected section title. Returns ------- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_md:8: CRITICAL: Unexpected section title. Notes ----- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_md:14: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_mu:4: CRITICAL: Unexpected section title. Returns ------- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_mu:8: CRITICAL: Unexpected section title. Notes ----- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_mu:14: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_mu:19: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_bulk:4: CRITICAL: Unexpected section title. Returns ------- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_bulk:8: CRITICAL: Unexpected section title. Notes ----- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_bulk:14: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_bulk:16: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_bulk:18: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_mu:4: CRITICAL: Unexpected section title. Returns ------- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_mu:8: CRITICAL: Unexpected section title. Notes ----- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_mu:14: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_mu:19: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_mu:20: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_shear:4: CRITICAL: Unexpected section title. Returns ------- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_shear:8: CRITICAL: Unexpected section title. Notes ----- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_shear:14: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_shear:16: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_shear:17: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_shear:19: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.md:4: CRITICAL: Unexpected section title. Returns ------- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.md:8: CRITICAL: Unexpected section title. Notes ----- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.md:14: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.mean_d_sq:5: CRITICAL: Unexpected section title. Returns ------- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.mean_d_sq:9: CRITICAL: Unexpected section title. Notes ----- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.mean_d_sq:18: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.dtd_covariance:4: CRITICAL: Unexpected section title. Parameters ---------- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.dtd_covariance:10: CRITICAL: Unexpected section title. Returns ------- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.dtd_covariance:15: CRITICAL: Unexpected section title. Notes ----- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.dtd_covariance:22: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.dtd_covariance:24: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.dtd_covariance:28: CRITICAL: Unexpected section title. References ---------- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.dtd_covariance:29: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.qti_signal:4: CRITICAL: Unexpected section title. Parameters ---------- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.qti_signal:16: CRITICAL: Unexpected section title. Returns ------- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.qti_signal:21: CRITICAL: Unexpected section title. Notes ----- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.qti_signal:27: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.qti_signal:29: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.design_matrix:4: CRITICAL: Unexpected section title. Parameters ---------- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.design_matrix:9: CRITICAL: Unexpected section title. Returns ------- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.design_matrix:14: CRITICAL: Unexpected section title. Notes ----- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.design_matrix:20: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.design_matrix:22: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.design_matrix:25: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.design_matrix:26: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.RumbaSDModel.__init__:23: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.RumbaSDModel.__init__:27: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.RumbaSDModel.__init__:68: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.RumbaSDModel.__init__:77: WARNING: Duplicate explicit target name: "2". WARNING: Failed to get a function signature for dipy.reconst.rumba.logger: is not a callable object /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.generate_kernel:11: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.generate_kernel:13: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.IsotropicFit.__init__:7: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.IsotropicFit.__init__:9: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.IsotropicFit.__init__:7: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.IsotropicFit.__init__:9: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.SparseFascicleModel.__init__:48: WARNING: Duplicate explicit target name: "rokem2014". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.SparseFascicleModel.fit:25: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.SparseFascicleModel.fit:27: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.SparseFascicleModel.fit:36: WARNING: Bullet list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.sfm_design_matrix:56: WARNING: Duplicate explicit target name: "rokem2015". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.sfm_design_matrix:61: WARNING: Duplicate explicit target name: "rokem2014". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.CsaOdfModel:5: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.OpdtModel:6: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.OpdtModel:9: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.QballModel:5: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sh_to_rh:33: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.bootstrap_data_array:12: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.bootstrap_data_array:14: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.bootstrap_data_array:17: WARNING: Duplicate explicit target name: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sf_to_sh:35: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sf_to_sh:38: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sf_to_sh:42: WARNING: Duplicate explicit target name: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sh_to_sf:33: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sh_to_sf:36: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sh_to_sf:40: WARNING: Duplicate explicit target name: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sh_to_sf_matrix:39: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sh_to_sf_matrix:42: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sh_to_sf_matrix:46: WARNING: Duplicate explicit target name: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.anisotropic_power:1: WARNING: Inline substitution_reference start-string without end-string. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.convert_sh_from_legacy:24: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.convert_sh_from_legacy:27: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.convert_sh_from_legacy:31: WARNING: Duplicate explicit target name: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.convert_sh_to_legacy:24: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.convert_sh_to_legacy:27: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.convert_sh_to_legacy:31: WARNING: Duplicate explicit target name: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.ShoreFit.rtop_pdf:6: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.ShoreFit.rtop_pdf:7: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.ShoreFit.rtop_signal:6: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.ShoreFit.rtop_signal:7: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.shore_matrix_pdf:14: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.shore_matrix_pdf:15: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.shore_matrix_odf:14: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.shore_matrix_odf:15: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/utils.py:docstring of dipy.reconst.utils.dki_design_matrix:13: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel:40: WARNING: Footnote [7] is not referenced. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel:43: WARNING: Footnote [8] is not referenced. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel:47: WARNING: Footnote [9] is not referenced. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.gen_dirac:20: ERROR: Undefined substitution referenced: "m". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sh_descoteaux_from_index:1: ERROR: Undefined substitution referenced: "m". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sh_descoteaux:1: ERROR: Undefined substitution referenced: "m". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.SparseFascicleModel.__init__:48: WARNING: duplicate citation Rokem2014, other instance in /<>/doc/reference/dipy.reconst.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.sfm_design_matrix:56: WARNING: duplicate citation Rokem2015, other instance in /<>/doc/reference/dipy.reconst.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.sfm_design_matrix:61: WARNING: duplicate citation Rokem2014, other instance in /<>/doc/reference/dipy.reconst.rst /<>/doc/reference/dipy.reconst.rst:70::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:70::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:70::1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/doc/reference/dipy.reconst.rst:70::1: ERROR: Unknown target name: "lambda". /<>/doc/reference/dipy.reconst.rst:70::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:70::1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/doc/reference/dipy.reconst.rst:70::1: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /<>/doc/reference/dipy.reconst.rst:70::1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:136::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:136::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:136::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:203::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:203::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:203::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:203::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:203::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:203::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:203::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:203::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:203::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:240::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:364::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:364::1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/doc/reference/dipy.reconst.rst:364::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:481::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:543::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:543::1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/doc/reference/dipy.reconst.rst:543::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:543::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:543::1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/doc/reference/dipy.reconst.rst:543::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:543::1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/doc/reference/dipy.reconst.rst:543::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:543::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:563::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:563::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:563::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.reconst.rst:563::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:3: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:3: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:9: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:19: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:30: ERROR: Unknown target name: "lambda". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:30: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:33: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSDTModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSDTModel.__init__:3: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSDTModel.__init__:27: ERROR: Unknown target name: "lambda". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.forward_sdt_deconv_mat:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.csdeconv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_deconv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_deconv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_deconv:1: ERROR: Unknown target name: "lambda". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_deconv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_deconv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_deconv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_sh_to_sharp:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_sh_to_sharp:1: ERROR: Duplicate target name, cannot be used as a unique reference: "4". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_sh_to_sharp:1: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_sh_to_sharp:1: ERROR: Unknown target name: "lambda". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_sh_to_sharp:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_sh_to_sharp:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_sh_to_sharp:1: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.mask_for_response_ssst:24: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.ak:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.ak:6: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.ak:27: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.ak:27: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.ak:30: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.kfa:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.kfa:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.kfa:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.mk:1: ERROR: Duplicate target name, cannot be used as a unique reference: "4". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.mk:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.mk:1: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.mkt:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.mkt:6: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.mkt:22: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.rk:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.rk:6: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.rk:27: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.rk:27: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.rk:38: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.directional_diffusion:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.directional_diffusion_variance:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.directional_diffusion_variance:13: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.directional_kurtosis:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.directional_kurtosis:20: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.apparent_kurtosis_coef:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.apparent_kurtosis_coef:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.apparent_kurtosis_coef:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.mean_kurtosis:1: ERROR: Duplicate target name, cannot be used as a unique reference: "4". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.mean_kurtosis:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.mean_kurtosis:1: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.radial_kurtosis:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.radial_kurtosis:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.radial_kurtosis:13: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.radial_kurtosis:32: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.radial_kurtosis:32: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.radial_kurtosis:43: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.axial_kurtosis:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.axial_kurtosis:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.axial_kurtosis:13: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.axial_kurtosis:34: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.axial_kurtosis:34: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.axial_kurtosis:37: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.mean_kurtosis_tensor:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.mean_kurtosis_tensor:13: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.mean_kurtosis_tensor:28: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.kurtosis_fractional_anisotropy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.kurtosis_fractional_anisotropy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.kurtosis_fractional_anisotropy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.ls_fit_dki:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.cls_fit_dki:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructureModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructureModel.predict:23: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.__init__:21: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.awf:6: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.axonal_diffusivity:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.hindered_ad:5: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.hindered_evals:5: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.hindered_rd:5: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.restricted_evals:5: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.tortuosity:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.tortuosity:7: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.axonal_water_fraction:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.diffusion_components:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.diffusion_components:34: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.dkimicro_prediction:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumFit.msd_discrete:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumFit.rtop_pdf:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumFit.rtop_pdf:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumFit.rtop_pdf:1: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumDeconvModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.LR_deconv:12: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorModel.__init__:17: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.linearity:4: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.odf:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.odf:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.planarity:4: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.sphericity:4: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.geodesic_anisotropy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.geodesic_anisotropy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.geodesic_anisotropy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.geodesic_anisotropy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.geodesic_anisotropy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.geodesic_anisotropy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.geodesic_anisotropy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.geodesic_anisotropy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.isotropic:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.isotropic:16: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.deviatoric:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.deviatoric:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.mode:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.mode:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.linearity:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.planarity:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.sphericity:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.wls_fit_tensor:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.ols_fit_tensor:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.restore_fit_tensor:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.restore_fit_tensor:15: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/forecast.py:docstring of dipy.reconst.forecast.ForecastModel:7: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/forecast.py:docstring of dipy.reconst.forecast.ForecastModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.FreeWaterTensorModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.FreeWaterTensorModel.__init__:9: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.FreeWaterTensorModel.__init__:12: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.fwdti_prediction:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.wls_fit_tensor:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.lower_triangular_to_cholesky:12: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.cholesky_to_lower_triangular:6: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/gqi.py:docstring of dipy.reconst.gqi.GeneralizedQSamplingModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/gqi.py:docstring of dipy.reconst.gqi.GeneralizedQSamplingModel.__init__:6: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/gqi.py:docstring of dipy.reconst.gqi.GeneralizedQSamplingModel.__init__:6: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/gqi.py:docstring of dipy.reconst.gqi.GeneralizedQSamplingModel.__init__:28: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/gqi.py:docstring of dipy.reconst.gqi.GeneralizedQSamplingModel.__init__:28: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/ivim.py:docstring of dipy.reconst.ivim.IvimModelVP.ivim_mix_cost_one:3: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/ivim.py:docstring of dipy.reconst.ivim.IvimModelVP.ivim_mix_cost_one:3: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel:3: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel:3: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel:3: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:4: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:8: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:8: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:17: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:17: ERROR: Duplicate target name, cannot be used as a unique reference: "4". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:17: ERROR: Duplicate target name, cannot be used as a unique reference: "5". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:21: ERROR: Duplicate target name, cannot be used as a unique reference: "5". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:21: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:50: ERROR: Duplicate target name, cannot be used as a unique reference: "6". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.msd:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.msd:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_parallel:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_parallel:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_perpendicular:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_perpendicular:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.norm_of_laplacian_signal:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.odf:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.odf_sh:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.odf_sh:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.qiv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.qiv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtap:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtap:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtop:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtop:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtpp:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtpp:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_index_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.b_mat:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.b_mat_isotropic:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_phi_1d:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_phi_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_psi_1d:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_psi_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_odf_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_phi_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_radial_signal_basis:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_psi_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_radial_pdf_basis:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_sh_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_sh_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_sh_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_laplacian_reg_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_laplacian_reg_matrix_from_index_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_index_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.map_laplace_u:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.map_laplace_t:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.map_laplace_s:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_STU_reg_matrices:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_laplacian_reg_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.generalized_crossvalidation_array:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.generalized_crossvalidation:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.MultiShellDeconvModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.MultiShellDeconvModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.MultiShellDeconvModel.__init__:6: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.MultiShellDeconvModel.__init__:11: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2di:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2di:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2di:12: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2f:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2f:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2f:11: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2uFA:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2uFA:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2uFA:13: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.msk_from_awf:16: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.awf_from_msk:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.awf_from_msk:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.awf_from_msk:19: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.wls_fit_msdki:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/odf.py:docstring of dipy.reconst.odf.gfa:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriModel:1: ERROR: Unknown target name: "n". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.msd:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.msd:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.norm_of_laplacian_signal:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.odf:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.odf_sh:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.odf_sh:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.qiv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.qiv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.qtdmri_to_mapmri_coef:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtap:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtap:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtop:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtop:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtpp:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtpp:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/doc/reference/dipy.reconst.rst:1964: ERROR: Duplicate target name, cannot be used as a unique reference: "qtdmri_signal_matrix". /<>/doc/reference/dipy.reconst.rst:1979: ERROR: Duplicate target name, cannot be used as a unique reference: "qtdmri_isotropic_signal_matrix". /<>/doc/reference/dipy.reconst.rst:1989: ERROR: Duplicate target name, cannot be used as a unique reference: "qtdmri_eap_matrix". /<>/doc/reference/dipy.reconst.rst:1994: ERROR: Duplicate target name, cannot be used as a unique reference: "qtdmri_isotropic_eap_matrix". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiModel.__init__:14: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_c:14: ERROR: Unknown target name: "c". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_c:14: ERROR: Unknown target name: "c". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.dtd_covariance:16: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.RumbaSDModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.RumbaSDModel.__init__:13: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.rumba_deconv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.rumba_deconv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.rumba_deconv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.mbessel_ratio:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.rumba_deconv_global:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.rumba_deconv_global:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.rumba_deconv_global:1: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sh_tournier_from_index:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sh_tournier_from_index:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sh_descoteaux_from_index:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sh_tournier:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sh_tournier:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sh_descoteaux:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sym_sh_mrtrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sym_sh_mrtrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sym_sh_mrtrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sym_sh_basis:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sf_to_sh:15: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sh_to_sf:15: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sh_to_sf_matrix:14: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.convert_sh_from_legacy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.convert_sh_from_legacy:11: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.convert_sh_to_legacy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.convert_sh_to_legacy:11: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.ShoreModel:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.ShoreModel:1: ERROR: Duplicate target name, cannot be used as a unique reference: "5". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.ShoreModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.ShoreFit.msd:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.ShoreFit.msd:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.ShoreFit.rtop_pdf:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.ShoreFit.rtop_signal:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.shore_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.shore_matrix_pdf:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.shore_matrix_odf:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.evaluate_results:9: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.recognize:23: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.recognize:25: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.recognize:55: WARNING: Inline literal start-string without end-string. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.recognize:56: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.recognize:57: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.recognize:79: WARNING: Duplicate explicit target name: "garyfallidis17". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.refine:25: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.refine:27: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.refine:57: WARNING: Inline literal start-string without end-string. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.refine:58: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.refine:59: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.refine:81: WARNING: Duplicate explicit target name: "garyfallidis17". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.refine:86: WARNING: Explicit markup ends without a blank line; unexpected unindent. WARNING: Failed to get a function signature for dipy.segment.bundles.logger: is not a callable object /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.ba_analysis:24: WARNING: Duplicate explicit target name: "garyfallidis12". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.cluster_bundle:23: WARNING: Duplicate explicit target name: "garyfallidis12". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.bundle_shape_similarity:10: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.bundle_shape_similarity:12: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.bundle_shape_similarity:13: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.bundle_shape_similarity:26: WARNING: Duplicate explicit target name: "chandio2020". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.bundle_shape_similarity:27: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.bundle_shape_similarity:32: WARNING: Duplicate explicit target name: "garyfallidis12". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/clustering.py:docstring of dipy.segment.clustering.Cluster.assign:5: WARNING: Inline emphasis start-string without end-string. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/clustering.py:docstring of dipy.segment.clustering.ClusterMap.add_cluster:5: WARNING: Inline emphasis start-string without end-string. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/clustering.py:docstring of dipy.segment.clustering.ClusterMap.remove_cluster:5: WARNING: Inline emphasis start-string without end-string. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/clustering.py:docstring of dipy.segment.clustering.QuickBundlesX:17: WARNING: Duplicate explicit target name: "garyfallidis12". WARNING: Failed to get a function signature for dipy.segment.clustering.logger: is not a callable object /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/clustering.py:docstring of dipy.segment.clustering.qbx_and_merge:13: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/clustering.py:docstring of dipy.segment.clustering.qbx_and_merge:14: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/clustering.py:docstring of dipy.segment.clustering.qbx_and_merge:31: WARNING: Duplicate explicit target name: "garyfallidis12". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/clustering.py:docstring of dipy.segment.clustering.qbx_and_merge:35: WARNING: Duplicate explicit target name: "garyfallidis16". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/fss.py:docstring of dipy.segment.fss.FastStreamlineSearch.radius_search:30: WARNING: Duplicate explicit target name: "stonge2022". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/mask.py:docstring of dipy.segment.mask.median_otsu:57: WARNING: Inline literal start-string without end-string. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/metric.py:docstring of dipy.segment.metric.mdf:20: WARNING: Duplicate explicit target name: "garyfallidis12". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.recognize:18: ERROR: Undefined substitution referenced: "num_threads + 1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.__init__:38: WARNING: duplicate citation Garyfallidis17, other instance in /<>/doc/reference/dipy.align.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.recognize:79: WARNING: duplicate citation Garyfallidis17, other instance in /<>/doc/reference/dipy.segment.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.refine:81: WARNING: duplicate citation Garyfallidis17, other instance in /<>/doc/reference/dipy.segment.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.bundle_adjacency:22: WARNING: duplicate citation Garyfallidis12, other instance in /<>/doc/interfaces/tracking_flow.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.ba_analysis:24: WARNING: duplicate citation Garyfallidis12, other instance in /<>/doc/reference/dipy.segment.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.cluster_bundle:23: WARNING: duplicate citation Garyfallidis12, other instance in /<>/doc/reference/dipy.segment.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.bundle_shape_similarity:26: WARNING: duplicate citation Chandio2020, other instance in /<>/doc/reference/dipy.segment.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.bundle_shape_similarity:32: WARNING: duplicate citation Garyfallidis12, other instance in /<>/doc/reference/dipy.segment.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/clustering.py:docstring of dipy.segment.clustering.QuickBundlesX:17: WARNING: duplicate citation Garyfallidis12, other instance in /<>/doc/reference/dipy.segment.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/clustering.py:docstring of dipy.segment.clustering.qbx_and_merge:31: WARNING: duplicate citation Garyfallidis12, other instance in /<>/doc/reference/dipy.segment.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/clustering.py:docstring of dipy.segment.clustering.qbx_and_merge:35: WARNING: duplicate citation Garyfallidis16, other instance in /<>/doc/reference/dipy.segment.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/fss.py:docstring of dipy.segment.fss.FastStreamlineSearch.radius_search:30: WARNING: duplicate citation StOnge2022, other instance in /<>/doc/reference/dipy.segment.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/segment/metric.py:docstring of dipy.segment.metric.mdf:20: WARNING: duplicate citation Garyfallidis12, other instance in /<>/doc/reference/dipy.segment.rst WARNING: Failed to get a function signature for dipy.sims.voxel.diffusion_evals: array([0.0015, 0.0004, 0.0004]) is not a callable object /<>/.pybuild/cpython3_3.12_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.diffusion_evals:84: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.diffusion_evals:85: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.diffusion_evals:87: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.add_noise:33: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.add_noise:35: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.sticks_and_ball:30: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.callaghan_perpendicular:19: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.cylinders_and_ball_soderman:37: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.cylinders_and_ball_soderman:40: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.single_tensor:31: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.single_tensor:34: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.multi_tensor_dki:8: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.multi_tensor_dki:9: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.multi_tensor_dki:55: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.kurtosis_element:37: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.dki_signal:29: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.single_tensor_odf:22: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.single_tensor_rtop:18: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.multi_tensor_rtop:20: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.single_tensor_pdf:25: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.multi_tensor_pdf:25: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.single_tensor_msd:18: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.multi_tensor_msd:20: WARNING: Duplicate explicit target name: "1". /<>/doc/reference/dipy.sims.rst:54::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference/dipy.sims.rst:54::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/sims/phantom.py:docstring of dipy.sims.phantom.add_noise:27: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/sims/phantom.py:docstring of dipy.sims.phantom.add_noise:27: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.add_noise:27: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.add_noise:27: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.callaghan_perpendicular:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.cylinders_and_ball_soderman:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.cylinders_and_ball_soderman:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.kurtosis_element:33: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/stats/analysis.py:docstring of dipy.stats.analysis.assignment_map:22: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/stats/analysis.py:docstring of dipy.stats.analysis.assignment_map:21: WARNING: duplicate citation Chandio2020, other instance in /<>/doc/reference/dipy.segment.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/tracking/utils.py:docstring of dipy.tracking.utils.transform_tracking_output:13: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/viz/horizon/app.py:docstring of dipy.viz.horizon.app.horizon:69: WARNING: Duplicate explicit target name: "horizon_ismrm19". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/viz/horizon/tab/base.py:docstring of dipy.viz.horizon.tab.base.HorizonTab.register_elements:5: WARNING: Inline emphasis start-string without end-string. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/viz/panel.py:docstring of dipy.viz.panel.slicer_panel:10: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/viz/panel.py:docstring of dipy.viz.panel.slicer_panel:14: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/viz/regtools.py:docstring of dipy.viz.regtools.overlay_images:30: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/viz/regtools.py:docstring of dipy.viz.regtools.plot_2d_diffeomorphic_map:48: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/viz/regtools.py:docstring of dipy.viz.regtools.plot_slices:19: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/viz/regtools.py:docstring of dipy.viz.regtools.overlay_slices:32: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/viz/horizon/app.py:docstring of dipy.viz.horizon.app.horizon:69: WARNING: duplicate citation Horizon_ISMRM19, other instance in /<>/doc/reference/dipy.viz.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/docstring_parser.py:docstring of dipy.workflows.docstring_parser:17: WARNING: Inline literal start-string without end-string. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:11: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:12: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:30: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:32: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:33: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:54: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:58: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:61: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.ImageRegistrationFlow.run:29: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.ApplyTransformFlow.run:11: WARNING: Inline emphasis start-string without end-string. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.NLMeansFlow.run:29: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.LPCAFlow.run:53: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.LPCAFlow.run:58: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.LPCAFlow.run:63: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.MPPCAFlow.run:30: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.MPPCAFlow.run:31: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.MPPCAFlow.run:35: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.MPPCAFlow.run:36: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.GibbsRingingFlow.run:26: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.GibbsRingingFlow.run:27: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.GibbsRingingFlow.run:30: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.GibbsRingingFlow.run:31: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/docstring_parser.py:docstring of dipy.workflows.docstring_parser.Reader.__init__:2: CRITICAL: Unexpected section title. Parameters ---------- /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/docstring_parser.py:docstring of dipy.workflows.docstring_parser.Reader.__init__:5: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/io.py:docstring of dipy.workflows.io.SplitFlow.run:7: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/io.py:docstring of dipy.workflows.io.SplitFlow.run:9: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/io.py:docstring of dipy.workflows.io.SplitFlow.run:10: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/nn.py:docstring of dipy.workflows.nn.EVACPlusFlow.run:20: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstDtiFlow.run:77: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstDtiFlow.run:81: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstDtiFlow.run:85: WARNING: Duplicate explicit target name: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstCSDFlow.run:66: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstCSAFlow.run:53: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstDkiFlow.run:66: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstDkiFlow.run:70: WARNING: Duplicate explicit target name: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstDkiFlow.run:75: WARNING: Duplicate explicit target name: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstRUMBAFlow.run:106: WARNING: Duplicate explicit target name: "1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/segment.py:docstring of dipy.workflows.segment.RecoBundlesFlow.run:54: WARNING: Duplicate explicit target name: "garyfallidis17". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/segment.py:docstring of dipy.workflows.segment.RecoBundlesFlow.run:59: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/segment.py:docstring of dipy.workflows.segment.LabelsBundlesFlow.run:16: WARNING: Duplicate explicit target name: "garyfallidis17". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.BundleAnalysisTractometryFlow.run:25: WARNING: Duplicate explicit target name: "chandio2020". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.BundleAnalysisTractometryFlow.run:26: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.LinearMixedModelsFlow.save_lmm_plot:11: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.LinearMixedModelsFlow.save_lmm_plot:13: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.LinearMixedModelsFlow.save_lmm_plot:14: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.BundleShapeAnalysis.run:24: WARNING: Duplicate explicit target name: "chandio2020". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.BundleShapeAnalysis.run:25: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.buan_bundle_profiles:29: WARNING: Duplicate explicit target name: "chandio2020". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.buan_bundle_profiles:30: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/viz.py:docstring of dipy.workflows.viz.HorizonFlow.run:10: ERROR: Unexpected indentation. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/viz.py:docstring of dipy.workflows.viz.HorizonFlow.run:11: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstDtiFlow.run:88: WARNING: Footnote [4] is not referenced. /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:17: ERROR: Undefined substitution referenced: "num_threads + 1". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:53: WARNING: duplicate citation Garyfallidis15, other instance in /<>/doc/reference/dipy.align.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:57: WARNING: duplicate citation Garyfallidis14, other instance in /<>/doc/reference/dipy.align.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:60: WARNING: duplicate citation Garyfallidis17, other instance in /<>/doc/reference/dipy.segment.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.BundleWarpFlow.run:47: WARNING: duplicate citation Chandio2023, other instance in /<>/doc/reference/dipy.align.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.NLMeansFlow.run:28: WARNING: duplicate citation Descoteaux08, other instance in /<>/doc/reference/dipy.denoise.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstIvimFlow.run:44: WARNING: duplicate citation Stejskal65, other instance in /<>/doc/interfaces/reconstruction_flow.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstIvimFlow.run:50: WARNING: duplicate citation LeBihan84, other instance in /<>/doc/interfaces/reconstruction_flow.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/segment.py:docstring of dipy.workflows.segment.RecoBundlesFlow.run:54: WARNING: duplicate citation Garyfallidis17, other instance in /<>/doc/reference/dipy.workflows.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/segment.py:docstring of dipy.workflows.segment.RecoBundlesFlow.run:58: WARNING: duplicate citation Chandio2020, other instance in /<>/doc/reference/dipy.stats.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/segment.py:docstring of dipy.workflows.segment.LabelsBundlesFlow.run:16: WARNING: duplicate citation Garyfallidis17, other instance in /<>/doc/reference/dipy.workflows.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.BundleAnalysisTractometryFlow.run:25: WARNING: duplicate citation Chandio2020, other instance in /<>/doc/reference/dipy.workflows.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.BundleShapeAnalysis.run:24: WARNING: duplicate citation Chandio2020, other instance in /<>/doc/reference/dipy.workflows.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.buan_bundle_profiles:29: WARNING: duplicate citation Chandio2020, other instance in /<>/doc/reference/dipy.workflows.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/viz.py:docstring of dipy.workflows.viz.HorizonFlow.run:71: WARNING: duplicate citation Horizon_ISMRM19, other instance in /<>/doc/reference/dipy.viz.rst /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.LPCAFlow.run:15: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.LPCAFlow.run:41: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.MPPCAFlow.run:19: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /<>/doc/reference/dipy.workflows.rst:587: ERROR: Duplicate target name, cannot be used as a unique reference: "io_iterator". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstDkiFlow.run:27: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /<>/.pybuild/cpython3_3.12_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstRUMBAFlow.run:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /<>/doc/reference_cmd/dipy_align_affine.rst:30: WARNING: Option list ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_align_affine.rst:32: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_align_affine.rst:34: ERROR: Unexpected indentation. /<>/doc/reference_cmd/dipy_align_affine.rst:35: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_align_syn.rst:32: WARNING: Option list ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_align_syn.rst:34: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_apply_transform.rst:17: WARNING: Inline emphasis start-string without end-string. /<>/doc/reference_cmd/dipy_buan_profiles.rst:38: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_buan_profiles.rst:37: WARNING: duplicate citation Chandio2020, other instance in /<>/doc/reference/dipy.workflows.rst /<>/doc/reference_cmd/dipy_buan_shapes.rst:25: WARNING: Option list ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_buan_shapes.rst:27: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_buan_shapes.rst:40: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_buan_shapes.rst:39: WARNING: duplicate citation Chandio2020, other instance in /<>/doc/reference_cmd/dipy_buan_profiles.rst /<>/doc/reference_cmd/dipy_bundlewarp.rst:57: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_bundlewarp.rst:56: WARNING: duplicate citation Chandio2023, other instance in /<>/doc/reference/dipy.workflows.rst /<>/doc/reference_cmd/dipy_denoise_lpca.rst:48: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_denoise_lpca.rst:45: WARNING: Footnote [1] is not referenced. /<>/doc/reference_cmd/dipy_denoise_mppca.rst:24: WARNING: Option list ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_denoise_mppca.rst:26: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_denoise_mppca.rst:43: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_denoise_mppca.rst:41: WARNING: Footnote [1] is not referenced. /<>/doc/reference_cmd/dipy_denoise_nlmeans.rst:43: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_denoise_nlmeans.rst:42: WARNING: duplicate citation Descoteaux08, other instance in /<>/doc/reference/dipy.workflows.rst /<>/doc/reference_cmd/dipy_denoise_patch2self.rst:32: WARNING: Option list ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_denoise_patch2self.rst:34: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_denoise_patch2self.rst:50: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_denoise_patch2self.rst:49: WARNING: duplicate citation Fadnavis20, other instance in /<>/doc/reference/dipy.workflows.rst /<>/doc/reference_cmd/dipy_evac_plus.rst:38: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_evac_plus.rst:37: WARNING: duplicate citation Park2022, other instance in /<>/doc/reference/dipy.workflows.rst /<>/doc/reference_cmd/dipy_fit_csa.rst:58: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_fit_csa.rst:57: WARNING: Footnote [1] is not referenced. /<>/doc/reference_cmd/dipy_fit_csd.rst:35: WARNING: Option list ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_fit_csd.rst:37: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_fit_csd.rst:39: WARNING: Option list ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_fit_csd.rst:43: ERROR: Unexpected indentation. /<>/doc/reference_cmd/dipy_fit_csd.rst:44: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_fit_csd.rst:66: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_fit_csd.rst:65: WARNING: Footnote [1] is not referenced. /<>/doc/reference_cmd/dipy_fit_dki.rst:34: WARNING: Option list ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_fit_dki.rst:64: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_fit_dki.rst:61: WARNING: Footnote [1] is not referenced. /<>/doc/reference_cmd/dipy_fit_dki.rst:62: WARNING: Footnote [2] is not referenced. /<>/doc/reference_cmd/dipy_fit_dti.rst:35: WARNING: Option list ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_fit_dti.rst:37: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_fit_dti.rst:64: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_fit_dti.rst:59: WARNING: Footnote [1] is not referenced. /<>/doc/reference_cmd/dipy_fit_dti.rst:60: WARNING: Footnote [2] is not referenced. /<>/doc/reference_cmd/dipy_fit_dti.rst:61: WARNING: Footnote [3] is not referenced. /<>/doc/reference_cmd/dipy_fit_dti.rst:62: WARNING: Footnote [4] is not referenced. /<>/doc/reference_cmd/dipy_fit_ivim.rst:32: WARNING: Option list ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_fit_ivim.rst:53: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_fit_ivim.rst:51: WARNING: duplicate citation Stejskal65, other instance in /<>/doc/reference/dipy.workflows.rst /<>/doc/reference_cmd/dipy_fit_ivim.rst:52: WARNING: duplicate citation LeBihan84, other instance in /<>/doc/reference/dipy.workflows.rst /<>/doc/reference_cmd/dipy_fit_mapmri.rst:39: WARNING: Option list ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_fit_mapmri.rst:41: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_gibbs_ringing.rst:40: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_gibbs_ringing.rst:38: WARNING: Footnote [1] is not referenced. /<>/doc/reference_cmd/dipy_gibbs_ringing.rst:39: WARNING: Footnote [2] is not referenced. /<>/doc/reference_cmd/dipy_horizon.rst:35: WARNING: Option list ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_horizon.rst:37: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_horizon.rst:45: WARNING: Option list ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_horizon.rst:47: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_horizon.rst:51: WARNING: Option list ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_horizon.rst:53: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_horizon.rst:54: WARNING: Option list ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_horizon.rst:70: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_horizon.rst:69: WARNING: duplicate citation Horizon_ISMRM19, other instance in /<>/doc/reference/dipy.workflows.rst /<>/doc/reference_cmd/dipy_labelsbundles.rst:36: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_labelsbundles.rst:35: WARNING: duplicate citation Garyfallidis17, other instance in /<>/doc/reference/dipy.workflows.rst /<>/doc/reference_cmd/dipy_median_otsu.rst:31: WARNING: Option list ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_recobundles.rst:70: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_recobundles.rst:68: WARNING: duplicate citation Garyfallidis17, other instance in /<>/doc/reference_cmd/dipy_labelsbundles.rst /<>/doc/reference_cmd/dipy_recobundles.rst:69: WARNING: duplicate citation Chandio2020, other instance in /<>/doc/reference_cmd/dipy_buan_shapes.rst /<>/doc/reference_cmd/dipy_slr.rst:33: WARNING: Option list ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_slr.rst:61: WARNING: Explicit markup ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_slr.rst:33: ERROR: Undefined substitution referenced: "num_threads + 1". /<>/doc/reference_cmd/dipy_slr.rst:58: WARNING: duplicate citation Garyfallidis15, other instance in /<>/doc/reference/dipy.workflows.rst /<>/doc/reference_cmd/dipy_slr.rst:59: WARNING: duplicate citation Garyfallidis14, other instance in /<>/doc/reference/dipy.workflows.rst /<>/doc/reference_cmd/dipy_slr.rst:60: WARNING: duplicate citation Garyfallidis17, other instance in /<>/doc/reference_cmd/dipy_recobundles.rst /<>/doc/reference_cmd/dipy_snr_in_cc.rst:27: WARNING: Option list ends without a blank line; unexpected unindent. /<>/doc/reference_cmd/dipy_split.rst:22: WARNING: Option list ends without a blank line; unexpected unindent. /<>/doc/release_notes/release1.4.1.rst:46: WARNING: Inline emphasis start-string without end-string. /<>/doc/release_notes/release1.4.1.rst:81: WARNING: Inline emphasis start-string without end-string. /<>/doc/release_notes/release1.4.1.rst:82: WARNING: Inline emphasis start-string without end-string. looking for now-outdated files... none found pickling environment... done checking consistency... /<>/doc/devel/gitwash/dot2_dot3.rst: WARNING: document isn't included in any toctree /<>/doc/devel/installation_from_source.rst: WARNING: document isn't included in any toctree /<>/doc/developers.rst: WARNING: document isn't included in any toctree /<>/doc/gimbal_lock.rst: WARNING: document isn't included in any toctree /<>/doc/recipes.rst: WARNING: document isn't included in any toctree /<>/doc/reconstruction_models_list.rst: WARNING: document isn't included in any toctree /<>/doc/subscribe.rst: WARNING: document isn't included in any toctree /<>/doc/theory/b_and_q.rst: WARNING: document isn't included in any toctree /<>/doc/theory/bmatrix.rst: WARNING: document isn't included in any toctree /<>/doc/theory/gqi.rst: WARNING: document isn't included in any toctree /<>/doc/reference_cmd/dipy_denoise_nlmeans.rst:42: WARNING: Citation [Descoteaux08] is not referenced. /<>/doc/reference_cmd/dipy_recobundles.rst:69: WARNING: Citation [Chandio2020] is not referenced. /<>/doc/reference/dipy.segment.rst:35: WARNING: Citation [Garyfallidis16] is not referenced. /<>/doc/reference_cmd/dipy_horizon.rst:69: WARNING: Citation [Horizon_ISMRM19] is not referenced. /<>/doc/reference_cmd/dipy_denoise_patch2self.rst:49: WARNING: Citation [Fadnavis20] is not referenced. /<>/doc/reference_cmd/dipy_evac_plus.rst:37: WARNING: Citation [Park2022] is not referenced. done preparing documents... 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[100%] user_guide/mission /<>/doc/devel/toolchain.rst:39: WARNING: undefined label: 'https://scientific-python.org/specs' /<>/doc/index.rst:31: WARNING: 'any' reference target not found: examples_built/index /<>/doc/index.rst:37: WARNING: more than one target found for 'any' cross-reference 'recipes': could be :doc:`` or :std:ref:`` /<>/doc/index.rst:75: WARNING: more than one target found for 'any' cross-reference 'stateoftheart': could be :doc:`` or :std:ref:`` /<>/doc/interfaces/bundlewarp_registration_flow.rst:32: WARNING: citation not found: Chandio23 /<>/doc/interfaces/denoise_flow.rst:104: WARNING: Could not obtain image size. :scale: option is ignored. /<>/doc/interfaces/denoise_flow.rst:107: WARNING: Could not obtain image size. :scale: option is ignored. /<>/doc/interfaces/denoise_flow.rst:150: WARNING: Could not obtain image size. :scale: option is ignored. /<>/doc/interfaces/denoise_flow.rst:153: WARNING: Could not obtain image size. :scale: option is ignored. /<>/doc/old_highlights.rst:267: WARNING: undefined label: 'examples' /<>/doc/old_highlights.rst:270: WARNING: undefined label: 'examples' /<>/doc/old_news.rst:36: WARNING: undefined label: 'examples' /<>/doc/recipes.rst:15: WARNING: undefined label: 'sphx_glr_examples_built_file_formats_streamline_formats.py' /<>/doc/reconstruction_models_list.rst:11: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_dti.py' /<>/doc/reconstruction_models_list.rst:17: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_restore_dti.py' /<>/doc/reconstruction_models_list.rst:23: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_fwdti.py' /<>/doc/reconstruction_models_list.rst:29: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_dki.py' /<>/doc/reconstruction_models_list.rst:35: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_dki.py' /<>/doc/reconstruction_models_list.rst:41: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_dki_micro.py' /<>/doc/reconstruction_models_list.rst:47: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_msdki.py' /<>/doc/reconstruction_models_list.rst:53: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_csa.py' /<>/doc/reconstruction_models_list.rst:65: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_ivim.py' /<>/doc/reconstruction_models_list.rst:71: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_ivim.py' /<>/doc/reconstruction_models_list.rst:83: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_dsi.py' /<>/doc/reconstruction_models_list.rst:89: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_dsid.py' /<>/doc/reconstruction_models_list.rst:95: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_gqi.py' /<>/doc/reconstruction_models_list.rst:101: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_sfm.py' /<>/doc/reconstruction_models_list.rst:107: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_csa.py' /<>/doc/reconstruction_models_list.rst:113: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_shore.py' /<>/doc/reconstruction_models_list.rst:119: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_mapmri.py' /<>/doc/reconstruction_models_list.rst:125: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_mapmri.py' /<>/doc/reconstruction_models_list.rst:137: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_csd.py' /<>/doc/reconstruction_models_list.rst:143: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_mcsd.py' /<>/doc/reconstruction_models_list.rst:149: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_forecast.py' /<>/doc/reconstruction_models_list.rst:155: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_rumba.py' /<>/doc/reconstruction_models_list.rst:161: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_qti.py' /<>/doc/reconstruction_models_list.rst:167: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_qtiplus.py' /<>/doc/reconstruction_models_list.rst:179: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_qtdmri.py' /<>/doc/reconstruction_models_list.rst:191: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_msdki.py' /<>/doc/reconstruction_models_list.rst:197: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_cti.py' /<>/.pybuild/cpython3_3.12_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.octahedron_vertices:85: WARNING: term not in glossary: 'generic type' /<>/.pybuild/cpython3_3.12_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.octahedron_faces:85: WARNING: term not in glossary: 'generic type' /<>/.pybuild/cpython3_3.12_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.icosahedron_vertices:85: WARNING: term not in glossary: 'generic type' /<>/.pybuild/cpython3_3.12_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.icosahedron_faces:85: WARNING: term not in glossary: 'generic type' /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_indices:85: WARNING: term not in glossary: 'generic type' /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_rows:85: WARNING: term not in glossary: 'generic type' /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_cols:85: WARNING: term not in glossary: 'generic type' /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.nls_iter:1: WARNING: citation not found: Chang2005 /<>/.pybuild/cpython3_3.12_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.nls_fit_tensor:1: WARNING: citation not found: Chang2005 /<>/.pybuild/cpython3_3.12_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.diffusion_evals:85: WARNING: term not in glossary: 'generic type' /<>/doc/stateoftheart.rst:7: WARNING: undefined label: 'examples' /<>/doc/stateoftheart.rst:24: WARNING: undefined label: 'examples' /<>/doc/user_guide/getting_started.rst:41: WARNING: undefined label: 'examples' /<>/doc/user_guide/introduction.rst:11: WARNING: undefined label: 'examples' generating indices... genindex py-modindex done writing additional pages... search done copying images... [ 17%] devel/gitwash/branch_dropdown.png copying images... [ 33%] devel/gitwash/collaborators.png copying images... [ 50%] devel/gitwash/forking_button.png copying images... [ 67%] theory/spherical_coordinates.png copying images... [ 83%] _static/colorfa.png copying images... [100%] _static/pretty_tracks.png dumping search index in English (code: en)... done dumping object inventory... done build succeeded, 1390 warnings. The HTML pages are in _build/html. Build finished. The HTML pages are in _build/html. make[2]: Leaving directory '/<>/doc' # objects inventory is of no use for the package rm doc/_build/html/objects.inv # references to cloudflare and github are privacy breaches sed 's@https://cdnjs\.cloudflare\.com/ajax/libs/mathjax/[^/]\+/@file:///usr/share/javascript/mathjax/unpacked/@' \ -i doc/_build/html/*.html \ doc/_build/html/interfaces/*.html \ doc/_build/html/theory/*.html sed 's@https://cdn\.jsdelivr\.net/npm/mathjax[@]3/es5/tex-mml-chtml\.js@file:///usr/share/nodejs/mathjax-full/es5/tex-mml-chtml.js@' \ -i doc/_build/html/*.html \ doc/_build/html/interfaces/*.html \ doc/_build/html/reference/*.html \ doc/_build/html/theory/*.html # FIXME: references to github are for images part of dipy_data, which # is not available in debian; these may need packaging to solve the # privacy breach here. # Run tests later on # cd build to prevent use of local/not-built source tree set -ex \ ; for PYTHON in 3.11 3.12 \ ; do PYPKG="/<>/debian/python3-dipy/usr/lib/python$PYTHON/dist-packages" \ ; export PYTHONPATH="$PYPKG" \ ; echo "I: Running Dipy unittests using $PYTHON" \ ; cd "$PYPKG" \ ; PATH=/<>/debian/python3-dipy/usr/bin:$PATH \ xvfb-run -a -s "-screen 0 1280x1024x24 -noreset" \ python$PYTHON -m pytest -v -k 'not dipy/align/tests/test_streamwarp.py and not dipy/denoise/tests/test_lpca.py and not dipy/reconst/tests/test_sfm.py and not dipy/workflows/tests/test_reconst_csa_csd.py and not dipy/workflows/tests/test_reconst_rumba.py' dipy \ ; rm .pytest_cache -rf \ ; done + PYPKG=/<>/debian/python3-dipy/usr/lib/python3.11/dist-packages + export PYTHONPATH=/<>/debian/python3-dipy/usr/lib/python3.11/dist-packages + echo I: Running Dipy unittests using 3.11 I: Running Dipy unittests using 3.11 + cd /<>/debian/python3-dipy/usr/lib/python3.11/dist-packages + PATH=/<>/debian/python3-dipy/usr/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games xvfb-run -a -s -screen 0 1280x1024x24 -noreset python3.11 -m pytest -v -k not dipy/align/tests/test_streamwarp.py and not dipy/denoise/tests/test_lpca.py and not dipy/reconst/tests/test_sfm.py and not dipy/workflows/tests/test_reconst_csa_csd.py and not dipy/workflows/tests/test_reconst_rumba.py dipy ============================= test session starts ============================== platform linux -- Python 3.11.8, pytest-7.4.4, pluggy-1.4.0 -- /usr/bin/python3.11 cachedir: .pytest_cache rootdir: /<> configfile: pyproject.toml collecting ... collected 973 items dipy/align/tests/test_api.py::test_syn_registration SKIPPED (test ne...) 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[ 61%] dipy/reconst/tests/test_qtdmri.py::test_visualise_gradient_table_G_Delta_rainbow PASSED [ 61%] dipy/reconst/tests/test_qti.py::test_from_3x3_to_6x1 PASSED [ 61%] dipy/reconst/tests/test_qti.py::test_from_6x1_to_3x3 PASSED [ 61%] dipy/reconst/tests/test_qti.py::test_from_6x6_to_21x1 PASSED [ 61%] dipy/reconst/tests/test_qti.py::test_from_21x1_to_6x6 PASSED [ 62%] dipy/reconst/tests/test_qti.py::test_cvxpy_1x6_to_3x3 PASSED [ 62%] dipy/reconst/tests/test_qti.py::test_cvxpy_1x21_to_6x6 PASSED [ 62%] dipy/reconst/tests/test_qti.py::test_helper_tensors PASSED [ 62%] dipy/reconst/tests/test_qti.py::test_dtd_covariance PASSED [ 62%] dipy/reconst/tests/test_qti.py::test_qti_signal PASSED [ 62%] dipy/reconst/tests/test_qti.py::test_design_matrix PASSED [ 62%] dipy/reconst/tests/test_qti.py::test_ls_sdp_fits PASSED [ 62%] dipy/reconst/tests/test_qti.py::test_qti_model PASSED [ 62%] dipy/reconst/tests/test_qti.py::test_qti_fit PASSED [ 63%] 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[ 99%] dipy/workflows/tests/test_workflow.py::test_force_overwrite PASSED [ 99%] dipy/workflows/tests/test_workflow.py::test_get_sub_runs PASSED [ 99%] dipy/workflows/tests/test_workflow.py::test_run PASSED [ 99%] dipy/workflows/tests/test_workflow.py::test_missing_file PASSED [100%] =============================== warnings summary =============================== dipy/reconst/qti.py:19 /<>/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:19: DeprecationWarning: invalid escape sequence '\m' """Convert symmetric 3 x 3 matrices into 6 x 1 vectors. dipy/reconst/qti.py:57 /<>/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:57: DeprecationWarning: invalid escape sequence '\m' """Convert 6 x 1 vectors into symmetric 3 x 3 matrices. dipy/reconst/qti.py:91 /<>/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:91: DeprecationWarning: invalid escape sequence '\m' """Convert symmetric 6 x 6 matrices into 21 x 1 vectors. dipy/reconst/qti.py:137 /<>/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:137: DeprecationWarning: invalid escape sequence '\m' """Convert 21 x 1 vectors into symmetric 6 x 6 matrices. dipy/reconst/qti.py:187 /<>/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:187: DeprecationWarning: invalid escape sequence '\m' """Convert a 1 x 6 vector into a symmetric 3 x 3 matrix. dipy/reconst/qti.py:222 /<>/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:222: DeprecationWarning: invalid escape sequence '\m' """Convert 1 x 21 vector into a symmetric 6 x 6 matrix. dipy/reconst/qti.py:280 /<>/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:280: DeprecationWarning: invalid escape sequence '\m' """Calculate covariance of a diffusion tensor distribution (DTD). dipy/reconst/qti.py:323 /<>/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:323: DeprecationWarning: invalid escape sequence '\e' """Generate signals using the covariance tensor signal representation. dipy/reconst/qti.py:395 /<>/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:395: DeprecationWarning: invalid escape sequence '\m' """Calculate the design matrix from the b-tensors. dipy/reconst/qti.py:761 /<>/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:761: DeprecationWarning: invalid escape sequence '\l' """Mean diffusivity. dipy/reconst/qti.py:783 /<>/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:783: DeprecationWarning: invalid escape sequence '\m' """Variance of microscopic mean diffusivities. dipy/reconst/qti.py:805 /<>/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:805: DeprecationWarning: invalid escape sequence '\m' """Shear variance. dipy/reconst/qti.py:827 /<>/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:827: DeprecationWarning: invalid escape sequence '\m' """Total isotropic variance. dipy/reconst/qti.py:863 /<>/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:863: DeprecationWarning: invalid escape sequence '\l' """Average of microscopic diffusion tensors' outer products with dipy/reconst/qti.py:886 /<>/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:886: DeprecationWarning: invalid escape sequence '\m' """Normalized variance of mean diffusivities. dipy/reconst/qti.py:909 /<>/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:909: DeprecationWarning: invalid escape sequence '\m' """Normalized microscopic anisotropy. dipy/reconst/qti.py:934 /<>/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:934: DeprecationWarning: invalid escape sequence '\m' """Microscopic fractional anisotropy. dipy/reconst/qti.py:953 /<>/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:953: DeprecationWarning: invalid escape sequence '\l' """Normalized macroscopic anisotropy. dipy/reconst/qti.py:979 /<>/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:979: DeprecationWarning: invalid escape sequence '\s' """Fractional anisotropy. dipy/reconst/qti.py:998 /<>/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:998: DeprecationWarning: invalid escape sequence '\m' """Microscopic orientation coherence. dipy/reconst/qti.py:1036 /<>/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:1036: DeprecationWarning: invalid escape sequence '\m' """Bulk kurtosis. dipy/reconst/qti.py:1061 /<>/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:1061: DeprecationWarning: invalid escape sequence '\m' """Shear kurtosis. dipy/reconst/qti.py:1086 /<>/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:1086: DeprecationWarning: invalid escape sequence '\m' """Microscopic kurtosis. -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ========== 810 passed, 163 skipped, 23 warnings in 1307.49s (0:21:47) ========== + rm .pytest_cache -rf + PYPKG=/<>/debian/python3-dipy/usr/lib/python3.12/dist-packages + export PYTHONPATH=/<>/debian/python3-dipy/usr/lib/python3.12/dist-packages + echo I: Running Dipy unittests using 3.12 I: Running Dipy unittests using 3.12 + cd /<>/debian/python3-dipy/usr/lib/python3.12/dist-packages + PATH=/<>/debian/python3-dipy/usr/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games xvfb-run -a -s -screen 0 1280x1024x24 -noreset python3.12 -m pytest -v -k not dipy/align/tests/test_streamwarp.py and not dipy/denoise/tests/test_lpca.py and not dipy/reconst/tests/test_sfm.py and not dipy/workflows/tests/test_reconst_csa_csd.py and not dipy/workflows/tests/test_reconst_rumba.py dipy ============================= test session starts ============================== platform linux -- Python 3.12.2, pytest-7.4.4, pluggy-1.4.0 -- /usr/bin/python3.12 cachedir: .pytest_cache rootdir: /<> configfile: pyproject.toml collecting ... collected 973 items dipy/align/tests/test_api.py::test_syn_registration SKIPPED (test ne...) 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[ 93%] dipy/workflows/tests/test_align.py::test_reslice PASSED [ 93%] dipy/workflows/tests/test_align.py::test_slr_flow PASSED [ 93%] dipy/workflows/tests/test_align.py::test_image_registration PASSED [ 93%] dipy/workflows/tests/test_align.py::test_apply_transform_error PASSED [ 93%] dipy/workflows/tests/test_align.py::test_apply_affine_transform PASSED [ 93%] dipy/workflows/tests/test_align.py::test_motion_correction PASSED [ 93%] dipy/workflows/tests/test_align.py::test_syn_registration_flow PASSED [ 93%] dipy/workflows/tests/test_align.py::test_bundlewarp_flow PASSED [ 93%] dipy/workflows/tests/test_denoise.py::test_nlmeans_flow PASSED [ 93%] dipy/workflows/tests/test_denoise.py::test_patch2self_flow PASSED [ 94%] dipy/workflows/tests/test_denoise.py::test_lpca_flow PASSED [ 94%] dipy/workflows/tests/test_denoise.py::test_mppca_flow PASSED [ 94%] dipy/workflows/tests/test_denoise.py::test_gibbs_flow PASSED [ 94%] dipy/workflows/tests/test_docstring_parser.py::test_signature PASSED [ 94%] dipy/workflows/tests/test_docstring_parser.py::test_summary PASSED [ 94%] dipy/workflows/tests/test_docstring_parser.py::test_extended_summary PASSED [ 94%] dipy/workflows/tests/test_docstring_parser.py::test_parameters PASSED [ 94%] dipy/workflows/tests/test_docstring_parser.py::test_other_parameters PASSED [ 94%] dipy/workflows/tests/test_docstring_parser.py::test_returns PASSED [ 94%] dipy/workflows/tests/test_docstring_parser.py::test_notes PASSED [ 95%] dipy/workflows/tests/test_docstring_parser.py::test_references PASSED [ 95%] dipy/workflows/tests/test_docstring_parser.py::test_examples PASSED [ 95%] dipy/workflows/tests/test_docstring_parser.py::test_index PASSED [ 95%] dipy/workflows/tests/test_docstring_parser.py::test_str PASSED [ 95%] dipy/workflows/tests/test_docstring_parser.py::test_parameters_without_extended_description PASSED [ 95%] dipy/workflows/tests/test_docstring_parser.py::test_raises PASSED [ 95%] dipy/workflows/tests/test_docstring_parser.py::test_warns PASSED [ 95%] dipy/workflows/tests/test_docstring_parser.py::test_see_also PASSED [ 95%] dipy/workflows/tests/test_docstring_parser.py::test_empty_first_line PASSED [ 95%] dipy/workflows/tests/test_docstring_parser.py::test_duplicate_signature PASSED [ 96%] dipy/workflows/tests/test_iap.py::test_none_or_dtype PASSED [ 96%] dipy/workflows/tests/test_iap.py::test_variable_type PASSED [ 96%] dipy/workflows/tests/test_iap.py::test_iap PASSED [ 96%] dipy/workflows/tests/test_iap.py::test_optional_str PASSED [ 96%] dipy/workflows/tests/test_iap.py::test_iap_epilog_and_description PASSED [ 96%] dipy/workflows/tests/test_iap.py::test_flow_runner PASSED [ 96%] dipy/workflows/tests/test_io.py::test_io_info PASSED [ 96%] dipy/workflows/tests/test_io.py::test_io_fetch SKIPPED (test needs i...) [ 96%] dipy/workflows/tests/test_io.py::test_io_fetch_fetcher_datanames PASSED [ 97%] dipy/workflows/tests/test_io.py::test_split_flow PASSED [ 97%] dipy/workflows/tests/test_masking.py::test_mask PASSED [ 97%] dipy/workflows/tests/test_nn.py::test_evac_plus_flow SKIPPED (Requir...) [ 97%] dipy/workflows/tests/test_reconst_csa_csd.py::test_reconst_csa PASSED [ 97%] dipy/workflows/tests/test_reconst_csa_csd.py::test_reconst_csd PASSED [ 97%] dipy/workflows/tests/test_reconst_dki.py::test_reconst_dki PASSED [ 97%] dipy/workflows/tests/test_reconst_dti.py::test_reconst_dti_wls PASSED [ 97%] dipy/workflows/tests/test_reconst_dti.py::test_reconst_dti_nlls PASSED [ 97%] dipy/workflows/tests/test_reconst_dti.py::test_reconst_dti_alt_tensor PASSED [ 97%] dipy/workflows/tests/test_reconst_ivim.py::test_reconst_ivim PASSED [ 98%] dipy/workflows/tests/test_reconst_mapmri.py::test_reconst_mmri_laplacian PASSED [ 98%] dipy/workflows/tests/test_reconst_mapmri.py::test_reconst_mmri_none PASSED [ 98%] dipy/workflows/tests/test_reconst_mapmri.py::test_reconst_mmri_both SKIPPED [ 98%] dipy/workflows/tests/test_reconst_mapmri.py::test_reconst_mmri_positivity SKIPPED [ 98%] dipy/workflows/tests/test_reconst_rumba.py::test_reconst_rumba PASSED [ 98%] dipy/workflows/tests/test_segment.py::test_median_otsu_flow PASSED [ 98%] dipy/workflows/tests/test_segment.py::test_recobundles_flow PASSED [ 98%] dipy/workflows/tests/test_stats.py::test_stats PASSED [ 98%] dipy/workflows/tests/test_stats.py::test_buan_bundle_profiles SKIPPED [ 98%] dipy/workflows/tests/test_stats.py::test_bundle_analysis_tractometry_flow SKIPPED [ 99%] dipy/workflows/tests/test_stats.py::test_linear_mixed_models_flow SKIPPED [ 99%] dipy/workflows/tests/test_stats.py::test_bundle_shape_analysis_flow SKIPPED [ 99%] dipy/workflows/tests/test_tracking.py::test_particle_filtering_tracking_workflows PASSED [ 99%] dipy/workflows/tests/test_tracking.py::test_local_fiber_tracking_workflow PASSED [ 99%] dipy/workflows/tests/test_viz.py::test_horizon_flow SKIPPED (Require...) [ 99%] dipy/workflows/tests/test_workflow.py::test_force_overwrite PASSED [ 99%] dipy/workflows/tests/test_workflow.py::test_get_sub_runs PASSED [ 99%] dipy/workflows/tests/test_workflow.py::test_run PASSED [ 99%] dipy/workflows/tests/test_workflow.py::test_missing_file PASSED [100%] =============================== warnings summary =============================== ../../../../../../../../../usr/lib/python3/dist-packages/dateutil/tz/tz.py:37 /usr/lib/python3/dist-packages/dateutil/tz/tz.py:37: DeprecationWarning: datetime.datetime.utcfromtimestamp() is deprecated and scheduled for removal in a future version. Use timezone-aware objects to represent datetimes in UTC: datetime.datetime.fromtimestamp(timestamp, datetime.UTC). EPOCH = datetime.datetime.utcfromtimestamp(0) dipy/reconst/qti.py:19 /<>/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:19: SyntaxWarning: invalid escape sequence '\m' """Convert symmetric 3 x 3 matrices into 6 x 1 vectors. dipy/reconst/qti.py:57 /<>/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:57: SyntaxWarning: invalid escape sequence '\m' """Convert 6 x 1 vectors into symmetric 3 x 3 matrices. dipy/reconst/qti.py:91 /<>/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:91: SyntaxWarning: invalid escape sequence '\m' """Convert symmetric 6 x 6 matrices into 21 x 1 vectors. dipy/reconst/qti.py:137 /<>/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:137: SyntaxWarning: invalid escape sequence '\m' """Convert 21 x 1 vectors into symmetric 6 x 6 matrices. dipy/reconst/qti.py:187 /<>/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:187: SyntaxWarning: invalid escape sequence '\m' """Convert a 1 x 6 vector into a symmetric 3 x 3 matrix. dipy/reconst/qti.py:222 /<>/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:222: SyntaxWarning: invalid escape sequence '\m' """Convert 1 x 21 vector into a symmetric 6 x 6 matrix. dipy/reconst/qti.py:280 /<>/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:280: SyntaxWarning: invalid escape sequence '\m' """Calculate covariance of a diffusion tensor distribution (DTD). dipy/reconst/qti.py:323 /<>/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:323: SyntaxWarning: invalid escape sequence '\e' """Generate signals using the covariance tensor signal representation. dipy/reconst/qti.py:395 /<>/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:395: SyntaxWarning: invalid escape sequence '\m' """Calculate the design matrix from the b-tensors. dipy/reconst/qti.py:761 /<>/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:761: SyntaxWarning: invalid escape sequence '\l' """Mean diffusivity. dipy/reconst/qti.py:783 /<>/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:783: SyntaxWarning: invalid escape sequence '\m' """Variance of microscopic mean diffusivities. dipy/reconst/qti.py:805 /<>/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:805: SyntaxWarning: invalid escape sequence '\m' """Shear variance. dipy/reconst/qti.py:827 /<>/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:827: SyntaxWarning: invalid escape sequence '\m' """Total isotropic variance. dipy/reconst/qti.py:863 /<>/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:863: SyntaxWarning: invalid escape sequence '\l' """Average of microscopic diffusion tensors' outer products with dipy/reconst/qti.py:886 /<>/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:886: SyntaxWarning: invalid escape sequence '\m' """Normalized variance of mean diffusivities. dipy/reconst/qti.py:909 /<>/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:909: SyntaxWarning: invalid escape sequence '\m' """Normalized microscopic anisotropy. dipy/reconst/qti.py:934 /<>/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:934: SyntaxWarning: invalid escape sequence '\m' """Microscopic fractional anisotropy. dipy/reconst/qti.py:953 /<>/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:953: SyntaxWarning: invalid escape sequence '\l' """Normalized macroscopic anisotropy. dipy/reconst/qti.py:979 /<>/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:979: SyntaxWarning: invalid escape sequence '\s' """Fractional anisotropy. dipy/reconst/qti.py:998 /<>/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:998: SyntaxWarning: invalid escape sequence '\m' """Microscopic orientation coherence. dipy/reconst/qti.py:1036 /<>/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:1036: SyntaxWarning: invalid escape sequence '\m' """Bulk kurtosis. dipy/reconst/qti.py:1061 /<>/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:1061: SyntaxWarning: invalid escape sequence '\m' """Shear kurtosis. dipy/reconst/qti.py:1086 /<>/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:1086: SyntaxWarning: invalid escape sequence '\m' """Microscopic kurtosis. debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/align/tests/test_reslice.py: 8 warnings debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/denoise/tests/test_gibbs.py: 19 warnings debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/direction/tests/test_peaks.py: 22 warnings debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/tests/test_sfm.py: 16 warnings debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/utils/tests/test_parallel.py: 8 warnings debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/workflows/tests/test_denoise.py: 1 warning debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/workflows/tests/test_reconst_csa_csd.py: 12 warnings debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/workflows/tests/test_reconst_rumba.py: 4 warnings /usr/lib/python3.12/multiprocessing/popen_fork.py:66: DeprecationWarning: This process (pid=28894) is multi-threaded, use of fork() may lead to deadlocks in the child. self.pid = os.fork() debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/tests/test_sfm.py::test_sfm /usr/lib/python3/dist-packages/joblib/externals/loky/backend/fork_exec.py:38: DeprecationWarning: This process (pid=28894) is multi-threaded, use of fork() may lead to deadlocks in the child. pid = os.fork() -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ========= 810 passed, 163 skipped, 115 warnings in 1351.73s (0:22:31) ========== + rm .pytest_cache -rf # Cleanup files landing unnecessarily in the python3 modules directory. rm -fv debian/python3-dipy/usr/lib/python3*/dist-packages/*.nii.gz removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dirs.nii.gz' removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/gfa.nii.gz' removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/inc_static.nii.gz' removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/indices.nii.gz' removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/shm.nii.gz' removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/values.nii.gz' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dirs.nii.gz' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/gfa.nii.gz' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/inc_static.nii.gz' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/indices.nii.gz' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/shm.nii.gz' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/values.nii.gz' rm -fv debian/python3-dipy/usr/lib/python3*/dist-packages/*.trk removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/moved.trk' removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/moved_centroids.trk' removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/moving_centroids.trk' removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/recognized_orig.trk' removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/static_centroids.trk' removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/tractogram.trk' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/moved.trk' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/moved_centroids.trk' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/moving_centroids.trk' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/recognized_orig.trk' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/static_centroids.trk' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/tractogram.trk' rm -fv debian/python3-dipy/usr/lib/python3*/dist-packages/affine.txt removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/affine.txt' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/affine.txt' # Cleanup files landing in non-standard path rm -rfv debian/python3-dipy/usr/doc removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_rumba.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/cluster_confidence.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/denoise_mppca.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/viz_roi_contour.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/denoise_gibbs.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_cti.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/bundlewarp_registration.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_bootstrap_peaks.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tissue_classification.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_csa_parallel.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_mcsd.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/bundle_group_registration.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/bundle_shape_similarity.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/viz_advanced.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_dki_micro.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/fast_streamline_search.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/viz_slice.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/streamline_length.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_sh.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/fiber_to_bundle_coherence.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_qti.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_ivim.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/affine_registration_3d.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/motion_correction.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/streamline_tools.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/workflow_creation.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/bundle_assignment_maps.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/bundle_extraction.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_stopping_criterion.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/segment_clustering_features.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_fwdti.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/quick_start.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/segment_extending_clustering_framework.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_shore_metrics.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/denoise_patch2self.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/histology_resdnn.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/segment_clustering_metrics.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/combined_workflow_creation.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/linear_fascicle_evaluation.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/path_length_map.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/syn_registration_2d.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/segment_quickbundles.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/kfold_xval.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_forecast.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/affine_registration_masks.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reslice_datasets.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_introduction_eudx.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/denoise_ascm.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_ptt.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_csd.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_dti.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_gqi.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/bundle_registration.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_msdki.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/snr_in_cc.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_pft.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/simulate_multi_tensor.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_dsi.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/viz_bundles.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_qtiplus.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_mapmri.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/denoise_localpca.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_dsid.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/register_binary_fuzzy.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/afq_tract_profiles.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_rumba.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/simulate_dki.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_sfm.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_csd_parallel.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/brain_extraction_dwi.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/contextual_enhancement.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/syn_registration_3d.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_qtdmri.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/restore_dti.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/gradients_spheres.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_dsi_metrics.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_shore.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_deterministic.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_sfm.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/streamline_registration.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_probabilistic.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/piesno.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/denoise_nlmeans.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/surface_seed.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_dki.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/streamline_formats.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_csa.py' removed directory 'debian/python3-dipy/usr/doc/dipy/examples' removed directory 'debian/python3-dipy/usr/doc/dipy' removed directory 'debian/python3-dipy/usr/doc' make[1]: Leaving directory '/<>' dh_install -O--buildsystem=pybuild dh_installdocs -O--buildsystem=pybuild dh_installdocs: warning: Cannot auto-detect main package for python-dipy-doc. If the default is wrong, please use --doc-main-package dh_installchangelogs -O--buildsystem=pybuild debian/rules override_dh_python3 make[1]: Entering directory '/<>' set -e \ ; test -d debian/python3-dipy/usr/lib || exit 0 \ ; for lib in $(find debian/python3-dipy/usr/lib -name "*.so") \ ; do sdir=$(dirname $lib) \ ; tdir=debian/python3-dipy-lib/${sdir#*python3-dipy/} \ ; mkdir -p "${tdir}" \ ; mv -v "${lib}" "${tdir}" \ ; done renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/core/interpolation.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/core/interpolation.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/direction/closest_peak_direction_getter.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/direction/closest_peak_direction_getter.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/direction/ptt_direction_getter.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/direction/ptt_direction_getter.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/direction/probabilistic_direction_getter.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/direction/probabilistic_direction_getter.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/direction/pmf.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/direction/pmf.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/direction/bootstrap_direction_getter.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/direction/bootstrap_direction_getter.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/eudx_direction_getter.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/reconst/eudx_direction_getter.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/quick_squash.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/reconst/quick_squash.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/vec_val_sum.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/reconst/vec_val_sum.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/recspeed.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/reconst/recspeed.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/segment/metricspeed.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/segment/metricspeed.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/segment/clustering_algorithms.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/segment/clustering_algorithms.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/segment/featurespeed.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/segment/featurespeed.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/segment/mrf.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/segment/mrf.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/segment/clusteringspeed.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/segment/clusteringspeed.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/segment/cythonutils.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/segment/cythonutils.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/tracking/propspeed.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/tracking/propspeed.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/tracking/streamlinespeed.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/tracking/streamlinespeed.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/tracking/fbcmeasures.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/tracking/fbcmeasures.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/tracking/stopping_criterion.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/tracking/stopping_criterion.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/tracking/direction_getter.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/tracking/direction_getter.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/tracking/vox2track.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/tracking/vox2track.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/tracking/localtrack.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/tracking/localtrack.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/tracking/distances.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/tracking/distances.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/utils/omp.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/utils/omp.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/utils/fast_numpy.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/utils/fast_numpy.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/denoise/shift_twist_convolution.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/denoise/shift_twist_convolution.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/denoise/pca_noise_estimate.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/denoise/pca_noise_estimate.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/denoise/enhancement_kernel.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/denoise/enhancement_kernel.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/denoise/denspeed.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/denoise/denspeed.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/denoise/nlmeans_block.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/denoise/nlmeans_block.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/align/expectmax.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/align/expectmax.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/align/crosscorr.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/align/crosscorr.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/align/vector_fields.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/align/vector_fields.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/align/parzenhist.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/align/parzenhist.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/align/transforms.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/align/transforms.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/align/sumsqdiff.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/align/sumsqdiff.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/align/bundlemin.cpython-311-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/align/bundlemin.cpython-311-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/core/interpolation.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/core/interpolation.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/direction/pmf.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/direction/pmf.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/direction/bootstrap_direction_getter.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/direction/bootstrap_direction_getter.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/direction/closest_peak_direction_getter.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/direction/closest_peak_direction_getter.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/direction/probabilistic_direction_getter.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/direction/probabilistic_direction_getter.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/direction/ptt_direction_getter.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/direction/ptt_direction_getter.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/recspeed.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/reconst/recspeed.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/eudx_direction_getter.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/reconst/eudx_direction_getter.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/vec_val_sum.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/reconst/vec_val_sum.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/quick_squash.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/reconst/quick_squash.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/segment/cythonutils.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/segment/cythonutils.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/segment/clustering_algorithms.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/segment/clustering_algorithms.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/segment/featurespeed.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/segment/featurespeed.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/segment/mrf.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/segment/mrf.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/segment/metricspeed.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/segment/metricspeed.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/segment/clusteringspeed.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/segment/clusteringspeed.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/tracking/distances.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/tracking/distances.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/tracking/propspeed.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/tracking/propspeed.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/tracking/streamlinespeed.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/tracking/streamlinespeed.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/tracking/localtrack.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/tracking/localtrack.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/tracking/stopping_criterion.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/tracking/stopping_criterion.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/tracking/direction_getter.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/tracking/direction_getter.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/tracking/vox2track.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/tracking/vox2track.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/tracking/fbcmeasures.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/tracking/fbcmeasures.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/utils/fast_numpy.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/utils/fast_numpy.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/utils/omp.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/utils/omp.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/denoise/shift_twist_convolution.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/denoise/shift_twist_convolution.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/denoise/denspeed.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/denoise/denspeed.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/denoise/nlmeans_block.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/denoise/nlmeans_block.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/denoise/enhancement_kernel.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/denoise/enhancement_kernel.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/denoise/pca_noise_estimate.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/denoise/pca_noise_estimate.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/align/bundlemin.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/align/bundlemin.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/align/expectmax.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/align/expectmax.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/align/crosscorr.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/align/crosscorr.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/align/sumsqdiff.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/align/sumsqdiff.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/align/parzenhist.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/align/parzenhist.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/align/vector_fields.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/align/vector_fields.cpython-312-x86_64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/align/transforms.cpython-312-x86_64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/align/transforms.cpython-312-x86_64-linux-gnu.so' dh_numpy3 -ppython3-dipy-lib dh_python3 I: dh_python3 pydist:325: Ignoring complex environment marker: tomli; python_version < "3.11" and extra == "doc" make[1]: Leaving directory '/<>' dh_installsystemduser -O--buildsystem=pybuild dh_lintian -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild debian/rules execute_before_dh_link-indep make[1]: Entering directory '/<>' rm -fv debian/python-dipy-doc/usr/share/doc/python-dipy-doc/html/_static/doctools.js removed 'debian/python-dipy-doc/usr/share/doc/python-dipy-doc/html/_static/doctools.js' rm -fv debian/python-dipy-doc/usr/share/doc/python-dipy-doc/html/_static/language_data.js removed 'debian/python-dipy-doc/usr/share/doc/python-dipy-doc/html/_static/language_data.js' rm -fv debian/python-dipy-doc/usr/share/doc/python-dipy-doc/html/_static/searchtools.js removed 'debian/python-dipy-doc/usr/share/doc/python-dipy-doc/html/_static/searchtools.js' make[1]: Leaving directory '/<>' dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild debian/rules override_dh_compress make[1]: Entering directory '/<>' dh_compress -X.py -X.html -X.css -X.jpg -X.txt -X.js -X.json -X.rtc \ -X.par -X.bin -Xobjects.inv make[1]: Leaving directory '/<>' dh_fixperms -O--buildsystem=pybuild debian/rules execute_after_dh_fixperms-arch make[1]: Entering directory '/<>' # Fix a couple of executables neither elf nor scripts. find debian/python3-dipy/usr/lib/python3*/dist-packages/ \ -name '*.py' \ -exec chmod -x '{}' '+' make[1]: Leaving directory '/<>' dh_missing -O--buildsystem=pybuild debian/rules override_dh_dwz make[1]: Entering directory '/<>' dh_dwz || true make[1]: Leaving directory '/<>' dh_strip -a -O--buildsystem=pybuild debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/core/interpolation.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 265d1e427355e7c21e2a7591615c0bf0ed348814 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/core/interpolation.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 b9056245c50593479f3011a6cb9f9f18b690c901 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/direction/pmf.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 9ed1de4a6f544926cb08f5b9c95141b385a1b9c2 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/direction/bootstrap_direction_getter.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 c67712659cc1f868cee65913af22223f2191f4d0 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/direction/closest_peak_direction_getter.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 1832f14efcb86b970bd041f270176c0003963ae9 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/direction/ptt_direction_getter.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 524a9a742104abb8ba594b651c1267ffe4bb4b15 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/direction/probabilistic_direction_getter.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 476dbfa4427e6faa84697d36730c58e77e12a04f debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/direction/closest_peak_direction_getter.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 ef2401e177089fc3d678cca69fea8647b2f39136 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/direction/pmf.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 c114e37881d40c65a404a5f6a35d81544a743f55 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/direction/probabilistic_direction_getter.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 56078765f1be31c280a19f6346e49f46d22ba63d debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/direction/ptt_direction_getter.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 e5716f7976901a472ffa744fe51611441b3d4ee8 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/direction/bootstrap_direction_getter.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 1f62feccb7ef2f17f17ff1c5eb5e6eee3aaedda3 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/reconst/recspeed.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 66914fe28260894265f9959c0d4ea24241f6b20d debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/reconst/eudx_direction_getter.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 0c853e65c6a61a7a7c042100e5d5aa4f3a7d9166 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/reconst/vec_val_sum.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 56b506d4d30e42c9f7d3adabdb820c2c7164a337 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/reconst/eudx_direction_getter.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 9a3fdbfcf7187c14c37124d3fb93b6097306f6a7 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/reconst/quick_squash.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 8056ffaa2909cb23bee93e8ab96486227f85b626 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/reconst/vec_val_sum.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 a4fad6b23d653a702bf923daac593e7296d55c18 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/reconst/recspeed.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 e88b8fa2986785d4649bd6c91ccce86346024ff9 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/reconst/quick_squash.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 0fbec4e4d3ed34591651dbaa56465e303e22458e debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/segment/metricspeed.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 1ade51f9cf38329ff1dca72ab6fc7def7b57bfee debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/segment/cythonutils.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 8c4d6a0311e23823974abd1ecf85d61c8164be31 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/segment/clustering_algorithms.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 e633bb68ba25dde4cb04a0731faaa5b35a4d40e5 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/segment/featurespeed.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 8cc732093f3b6618ece247e64349d2135352bf9c debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/segment/clustering_algorithms.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 076d2acd3844c851193ffbd2625d98f334b98615 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/segment/featurespeed.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 a9623817890285fbb996c1b889a5af2a3cc66908 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/segment/mrf.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 1af774c327ee16042f15caefe4cfb313215c03ff debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/segment/metricspeed.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 30c4e32787a08776f2e7a31bd0b90ebb6fae6784 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/segment/clusteringspeed.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 04282a7b2fa3ec66fb0fc3a91dcf62333d30ed06 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/segment/mrf.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 e7565a6f231898cf972dede7dbf23cdee8f4de6f debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/segment/clusteringspeed.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 c1d5f30b1739b43c38f043f3bc0dcde0e4f02099 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/segment/cythonutils.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 69e20a5913b9befc24c6f2fa0948e9f5acbe7230 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/tracking/distances.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 9622c35cebea1b65a5d12c9bf2502408f2520cbb debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/tracking/propspeed.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 5f328523cb22325384a665ad1b96b546742faf0f debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/tracking/propspeed.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 cec6408cf53a62a8859c8f41970730c280234666 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/tracking/streamlinespeed.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 6f7d22a208d401fde23c029c2612be5f3c0e989f debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/tracking/localtrack.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 ea47085ea71763510d1c30023dac38e1689a366a debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/tracking/stopping_criterion.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 face15c70be57e81d2929da326fc3a8ced2984d6 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/tracking/streamlinespeed.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 542563b29b7e2e9418a8e1a489a4a16cba4eefcc debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/tracking/fbcmeasures.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 ec9fef71d411a63f4329a3019fa9115e541b3b54 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/tracking/stopping_criterion.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 b444a5b1855f5a3ea1d0722f901e428e2bec26ef debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/tracking/direction_getter.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 08af2075ef29c6dcfcc35d428d12df78a6903d81 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/tracking/direction_getter.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 80e51e826849227f4d3dcc26260fcbc873ba2794 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/tracking/vox2track.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 f4e0edb56cc58cd80380bc27ac2692f8492a382e debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/tracking/localtrack.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 8aca9a7664434955c1077b657f0a54dbf6d35747 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/tracking/vox2track.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 4d173f30bd332256c94f350b3f2091361f62f5d3 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/tracking/fbcmeasures.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 75837f24d6c6dac5ed7b709d9a707256354b5426 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/tracking/distances.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 999890de29d7d94ce9dac160ccdb975a67e393b5 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/utils/omp.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 d41d4ac2789cfddd390ed600307d846a32cbe03f debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/utils/fast_numpy.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 3d2038863ff69485625cc44846d6dd0771510ac0 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/utils/omp.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 55080fbdf50d78e6c1f8b7dde1f98c5489e4885c debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/utils/fast_numpy.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 c7e3c5cb0ea526973c38447b61406a4cfd83ad8c debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/denoise/shift_twist_convolution.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 3687415e792204b65ff179c867ec4bb3bda6d5a9 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/denoise/shift_twist_convolution.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 8f43d2f107eb530b20874143a8d8393007d33507 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/denoise/denspeed.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 3836abd759aca21edfefbad5f4f06ad7ec8193da debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/denoise/pca_noise_estimate.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 a535f5e1ed3ce03546706825f1598d6ee319479b debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/denoise/nlmeans_block.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 cab2027da6ef783fc53273b06bd3e699051b7605 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/denoise/enhancement_kernel.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 7f0426ceb6943460e7f0cbf5637d5f62919bab56 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/denoise/enhancement_kernel.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f21 36962cd7abcde9fa3d22d85c98383a35ea515b57 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/denoise/denspeed.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 fdfebad15413e30eebd9b21c88304e9aa2769a0f debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/denoise/nlmeans_block.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 cc3a0e4c0ccb986c82a1e1419e09755a4fe8b0c4 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/denoise/pca_noise_estimate.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 605521ef382a4ffb7290de031e2464c63de4a4b1 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/align/expectmax.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 54dc784e221366a1299a0ca934967dbd73f03f87 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/align/bundlemin.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 9fe8d8fb3d65a03f648e77f2ece9ba4c5ea57894 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/align/expectmax.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 66a9e096e2891e58119a1e6d436a3aaa33f88e75 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/align/crosscorr.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 efb2882885ab063cafc3a6a6f99dac09397e2913 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/align/sumsqdiff.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 45c35f8455bff5e823b4a87d5064f8b65d72feab debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/align/crosscorr.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 4bf3b477f5d5d4362989c6570e44eecf87bb2f7b debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/align/parzenhist.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 b25afd73568d383d88dade04ec0f6646b7f95e90 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/align/vector_fields.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 ed2bad5a403604881cce9675573d9a461a126b6d debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/align/vector_fields.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 b58a1b60a0321ea8d7a9a18022f6b71434a3a146 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/align/parzenhist.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 d5f348643282f3a5defecf2232eaada628e26b84 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/align/transforms.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 a473479c1b500167061e5d184a04a5574bc55482 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/align/transforms.cpython-312-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 b1b57bc833b9bde51a0f67c160bf18ab8413a788 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/align/sumsqdiff.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 8a345b5dd7cea2996a0cb087ab08fe5cd07c1fd4 debugedit: debian/python3-dipy-lib/usr/lib/python3/dist-packages/dipy/align/bundlemin.cpython-311-x86_64-linux-gnu.so: Unknown DWARF DW_FORM_0x1f20 de1d6cfa4d1bee3ffb7dbc016ba24498b0e51c93 dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dpkg-gencontrol: warning: Provides field of package python3-dipy-lib: substitution variable ${python3:Provides} used, but is not defined dpkg-gencontrol: warning: Depends field of package python3-dipy: substitution variable ${shlibs:Depends} used, but is not defined dpkg-gencontrol: warning: Provides field of package python3-dipy: substitution variable ${python3:Provides} used, but is not defined dpkg-gencontrol: warning: package python3-dipy: substitution variable ${python3:Versions} used, but is not defined dpkg-gencontrol: warning: Provides field of package python3-dipy-lib: substitution variable ${python3:Provides} used, but is not defined dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild INFO: pkgstriptranslations version 154 INFO: pkgstriptranslations version 154 INFO: pkgstriptranslations version 154 pkgstriptranslations: processing python3-dipy-lib (in debian/python3-dipy-lib); do_strip: , oemstrip: pkgstriptranslations: processing python3-dipy (in debian/python3-dipy); do_strip: , oemstrip: INFO: pkgstriptranslations version 154 pkgstriptranslations: processing python-dipy-doc (in debian/python-dipy-doc); do_strip: , oemstrip: pkgstriptranslations: processing python3-dipy-lib-dbgsym (in debian/.debhelper/python3-dipy-lib/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgstripfiles: processing control file: debian/python3-dipy-lib/DEBIAN/control, package python3-dipy-lib, directory debian/python3-dipy-lib INFO: pkgstripfiles: waiting for lock (python3-dipy-lib) ... pkgstripfiles: processing control file: debian/python3-dipy/DEBIAN/control, package python3-dipy, directory debian/python3-dipy Searching for duplicated docs in dependency python3-dipy-lib... pkgstripfiles: processing control file: debian/python-dipy-doc/DEBIAN/control, package python-dipy-doc, directory debian/python-dipy-doc INFO: pkgstripfiles: waiting for lock (python-dipy-doc) ... symlinking changelog.Debian.gz in python3-dipy to file in python3-dipy-lib pkgstripfiles: Running PNG optimization (using 4 cpus) for package python3-dipy ... pkgstripfiles: No PNG files. dpkg-deb: building package 'python3-dipy' in '../python3-dipy_1.8.0-2ubuntu1_all.deb'. pkgstripfiles: processing control file: debian/.debhelper/python3-dipy-lib/dbgsym-root/DEBIAN/control, package python3-dipy-lib-dbgsym, directory debian/.debhelper/python3-dipy-lib/dbgsym-root dpkg-deb: building package 'python3-dipy-lib-dbgsym' in 'debian/.debhelper/scratch-space/build-python3-dipy-lib/python3-dipy-lib-dbgsym_1.8.0-2ubuntu1_amd64.deb'. pkgstripfiles: Running PNG optimization (using 4 cpus) for package python3-dipy-lib ... pkgstripfiles: No PNG files. dpkg-deb: building package 'python3-dipy-lib' in '../python3-dipy-lib_1.8.0-2ubuntu1_amd64.deb'. pkgstripfiles: Disabled PNG optimization for -doc package python-dipy-doc (to save build time) dpkg-deb: building package 'python-dipy-doc' in '../python-dipy-doc_1.8.0-2ubuntu1_all.deb'. Renaming python3-dipy-lib-dbgsym_1.8.0-2ubuntu1_amd64.deb to python3-dipy-lib-dbgsym_1.8.0-2ubuntu1_amd64.ddeb dpkg-genbuildinfo --build=binary -O../dipy_1.8.0-2ubuntu1_amd64.buildinfo dpkg-genchanges --build=binary -mLaunchpad Build Daemon -O../dipy_1.8.0-2ubuntu1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-source: info: using options from dipy-1.8.0/debian/source/options: --extend-diff-ignore=(^|/)dipy/COMMIT_INFO.txt$ dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2024-02-12T21:19:42Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ dipy_1.8.0-2ubuntu1_amd64.changes: ---------------------------------- Format: 1.8 Date: Mon, 12 Feb 2024 20:19:56 +0000 Source: dipy Binary: python-dipy-doc python3-dipy python3-dipy-lib Built-For-Profiles: noudeb Architecture: all amd64 Version: 1.8.0-2ubuntu1 Distribution: noble-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Graham Inggs Description: python-dipy-doc - Python library for the analysis of diffusion MRI datasets -- docu python3-dipy - Python library for the analysis of diffusion MRI datasets python3-dipy-lib - Python library for the analysis of diffusion MRI datasets -- Pyth Changes: dipy (1.8.0-2ubuntu1) noble; urgency=medium . * Do not fail when attempting to clean up after a nocheck build Checksums-Sha1: d0d9e58f9b56e8019c7c015a5d1c8b45b9cb3106 14675 dipy_1.8.0-2ubuntu1_amd64.buildinfo c3faf9d010b565e0301b4821a508225e396e1d8e 2761306 python-dipy-doc_1.8.0-2ubuntu1_all.deb 2151849f5fda6d1d07c91aa2d64709b5d70e8876 36032632 python3-dipy-lib-dbgsym_1.8.0-2ubuntu1_amd64.ddeb 7341ce63925c1ae98e9b8918f9256b3b75eebcb3 4148550 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python3-dipy-lib_1.8.0-2ubuntu1_amd64.deb 36b6bbd14fb08a908351eeaca2aa44b0 3506480 python3-dipy_1.8.0-2ubuntu1_all.deb Checksums-Sha1: c3faf9d010b565e0301b4821a508225e396e1d8e 2761306 python-dipy-doc_1.8.0-2ubuntu1_all.deb 2151849f5fda6d1d07c91aa2d64709b5d70e8876 36032632 python3-dipy-lib-dbgsym_1.8.0-2ubuntu1_amd64.ddeb 7341ce63925c1ae98e9b8918f9256b3b75eebcb3 4148550 python3-dipy-lib_1.8.0-2ubuntu1_amd64.deb a16be0d126aa9f61986a3ba3023613efb4cc8fc2 3506480 python3-dipy_1.8.0-2ubuntu1_all.deb Checksums-Sha256: cc8ffc45740b97f6917d35b2f3c0896ba145bc6ebca658ad670e70e2d6a81a5f 2761306 python-dipy-doc_1.8.0-2ubuntu1_all.deb 9b880407ac142c3590addaf6417b6230d1abd4f235017f62265d6e29cf27ae7e 36032632 python3-dipy-lib-dbgsym_1.8.0-2ubuntu1_amd64.ddeb df5408ec36230bc68a0c22603cf80d5e7517f9e3c677006d37872786b808c425 4148550 python3-dipy-lib_1.8.0-2ubuntu1_amd64.deb cc7b2e80eabd848e11c17232d5883adc5179146b3ec19d7e3d67ece60a5fcf11 3506480 python3-dipy_1.8.0-2ubuntu1_all.deb Build-Origin: Ubuntu Build-Architecture: amd64 Build-Date: Mon, 12 Feb 2024 21:19:42 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs usr-local-has-programs Installed-Build-Depends: autoconf (= 2.71-3), automake (= 1:1.16.5-1.3ubuntu1), autopoint (= 0.21-14ubuntu1), autotools-dev (= 20220109.1), base-files (= 13ubuntu6), base-passwd (= 3.6.3), bash (= 5.2.21-2ubuntu1), binutils (= 2.42-2ubuntu1), binutils-common (= 2.42-2ubuntu1), binutils-x86-64-linux-gnu (= 2.42-2ubuntu1), blt (= 2.5.3+dfsg-7), bsdextrautils (= 2.39.2-6ubuntu1), bsdutils (= 1:2.39.2-6ubuntu1), build-essential (= 12.10ubuntu1), bzip2 (= 1.0.8-5build1), ca-certificates (= 20240203), coreutils (= 9.4-2ubuntu3), cpp (= 4:13.2.0-7ubuntu1), cpp-13 (= 13.2.0-13ubuntu1), cpp-13-x86-64-linux-gnu (= 13.2.0-13ubuntu1), cpp-x86-64-linux-gnu (= 4:13.2.0-7ubuntu1), cython3 (= 3.0.8-1ubuntu1), dash (= 0.5.12-6ubuntu1), debconf (= 1.5.85), debhelper (= 13.13ubuntu1), debianutils (= 5.16), debugedit (= 1:5.0-5), dh-autoreconf (= 20), dh-python (= 6.20231223), dh-strip-nondeterminism (= 1.13.1-1), diffutils (= 1:3.10-1), docutils-common (= 0.20.1+dfsg-3), dpkg (= 1.22.4ubuntu2), dpkg-dev (= 1.22.4ubuntu2), dwz (= 0.15-1), file (= 1:5.45-2), findutils (= 4.9.0-5), fontconfig-config (= 2.14.2-6ubuntu1), fonts-dejavu-core (= 2.37-8), fonts-dejavu-mono (= 2.37-8), fonts-lyx (= 2.4.0~RC1-2), g++ (= 4:13.2.0-7ubuntu1), g++-13 (= 13.2.0-13ubuntu1), g++-13-x86-64-linux-gnu (= 13.2.0-13ubuntu1), g++-x86-64-linux-gnu (= 4:13.2.0-7ubuntu1), gcc (= 4:13.2.0-7ubuntu1), gcc-13 (= 13.2.0-13ubuntu1), gcc-13-base (= 13.2.0-13ubuntu1), gcc-13-x86-64-linux-gnu (= 13.2.0-13ubuntu1), gcc-14-base (= 14-20240201-3ubuntu1), gcc-x86-64-linux-gnu (= 4:13.2.0-7ubuntu1), gettext (= 0.21-14ubuntu1), gettext-base (= 0.21-14ubuntu1), grep (= 3.11-4), groff-base (= 1.23.0-3), gzip (= 1.12-1ubuntu1), hostname (= 3.23+nmu1ubuntu1), init-system-helpers (= 1.66ubuntu1), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.1-4ubuntu1), libaec0 (= 1.1.2-1), libarchive-zip-perl (= 1.68-1), libasan8 (= 14-20240201-3ubuntu1), libatomic1 (= 14-20240201-3ubuntu1), libattr1 (= 1:2.5.2-1), libaudit-common (= 1:3.1.2-2), libaudit1 (= 1:3.1.2-2), libbinutils (= 2.42-2ubuntu1), libblas3 (= 3.12.0-2), libblkid1 (= 2.39.2-6ubuntu1), libblosc1 (= 1.21.5+ds-1), libblosc2-2 (= 2.13.1+ds-1ubuntu1), libbrotli1 (= 1.1.0-2), libbsd0 (= 0.11.8-1), libbz2-1.0 (= 1.0.8-5build1), libc-bin (= 2.39-0ubuntu1), libc-dev-bin (= 2.39-0ubuntu1), libc6 (= 2.39-0ubuntu1), libc6-dev (= 2.39-0ubuntu1), libcap-ng0 (= 0.8.4-1), libcap2 (= 1:2.66-4ubuntu1), libcc1-0 (= 14-20240201-3ubuntu1), libcom-err2 (= 1.47.0-2ubuntu1), libcrypt-dev (= 1:4.4.36-4), libcrypt1 (= 1:4.4.36-4), libctf-nobfd0 (= 2.42-2ubuntu1), libctf0 (= 2.42-2ubuntu1), libcurl4 (= 8.5.0-2ubuntu2), libdb5.3 (= 5.3.28+dfsg2-4), libdebconfclient0 (= 0.271ubuntu1), libdebhelper-perl (= 13.13ubuntu1), libdeflate0 (= 1.19-1), libdpkg-perl (= 1.22.4ubuntu2), libdrm-amdgpu1 (= 2.4.120-1), libdrm-common (= 2.4.120-1), libdrm-intel1 (= 2.4.120-1), libdrm-nouveau2 (= 2.4.120-1), libdrm-radeon1 (= 2.4.120-1), libdrm2 (= 2.4.120-1), libdw1 (= 0.190-1), libedit2 (= 3.1-20230828-1), libelf1 (= 0.190-1), libexpat1 (= 2.5.0-2), libexpat1-dev (= 2.5.0-2), libffi8 (= 3.4.4-2), libfile-stripnondeterminism-perl (= 1.13.1-1), libfontconfig1 (= 2.14.2-6ubuntu1), libfontenc1 (= 1:1.1.4-1build3), libfreetype6 (= 2.13.2+dfsg-1), libfribidi0 (= 1.0.13-3), libgcc-13-dev (= 13.2.0-13ubuntu1), libgcc-s1 (= 14-20240201-3ubuntu1), libgcrypt20 (= 1.10.3-2), libgdbm-compat4 (= 1.23-5), libgdbm6 (= 1.23-5), libgfortran5 (= 14-20240201-3ubuntu1), libgl1 (= 1.7.0-1), libgl1-mesa-dri (= 23.3.3-1ubuntu2), libglapi-mesa (= 23.3.3-1ubuntu2), libglib2.0-0 (= 2.79.1-1), libglvnd0 (= 1.7.0-1), libglx-mesa0 (= 23.3.3-1ubuntu2), libglx0 (= 1.7.0-1), libgmp10 (= 2:6.3.0+dfsg-2ubuntu4), libgnutls30 (= 3.8.3-1ubuntu1), libgomp1 (= 14-20240201-3ubuntu1), libgpg-error0 (= 1.47-3build1), libgprofng0 (= 2.42-2ubuntu1), libgraphite2-3 (= 1.3.14-2), libgssapi-krb5-2 (= 1.20.1-5build1), libharfbuzz0b (= 8.3.0-2), libhdf5-103-1 (= 1.10.10+repack-3ubuntu1), libhdf5-hl-100 (= 1.10.10+repack-3ubuntu1), libhogweed6 (= 3.9.1-2), libhwasan0 (= 14-20240201-3ubuntu1), libice6 (= 2:1.0.10-1build2), libicu74 (= 74.2-1ubuntu1), libidn2-0 (= 2.3.7-2), libimagequant0 (= 2.18.0-1), libisl23 (= 0.26-3), libitm1 (= 14-20240201-3ubuntu1), libjansson4 (= 2.14-2), libjbig0 (= 2.1-6.1ubuntu1), libjpeg-turbo8 (= 2.1.5-2ubuntu1), libjpeg8 (= 8c-2ubuntu11), libjs-jquery (= 3.6.1+dfsg+~3.5.14-1), libjs-jquery-ui (= 1.13.2+dfsg-1), libjs-sphinxdoc (= 7.2.6-3), libjs-underscore (= 1.13.4~dfsg+~1.11.4-3), libjson-perl (= 4.10000-1), libk5crypto3 (= 1.20.1-5build1), libkeyutils1 (= 1.6.3-2), libkrb5-3 (= 1.20.1-5build1), libkrb5support0 (= 1.20.1-5build1), liblapack3 (= 3.12.0-2), liblbfgsb0 (= 3.0+dfsg.4-1), liblcms2-2 (= 2.14-2), libldap2 (= 2.6.7+dfsg-1~exp1ubuntu1), liblerc4 (= 4.0.0+ds-4ubuntu1), libllvm17 (= 1:17.0.6-5build1), liblsan0 (= 14-20240201-3ubuntu1), liblz4-1 (= 1.9.4-1), liblzf1 (= 3.6-4), liblzma5 (= 5.4.5-0.3), liblzo2-2 (= 2.10-2build3), libmagic-mgc (= 1:5.45-2), libmagic1 (= 1:5.45-2), libmd0 (= 1.1.0-2), libmount1 (= 2.39.2-6ubuntu1), libmpc3 (= 1.3.1-1), libmpfr6 (= 4.2.1-1), libncursesw6 (= 6.4+20240113-1), libnettle8 (= 3.9.1-2), libnghttp2-14 (= 1.59.0-1), libnsl-dev (= 1.3.0-3), libnsl2 (= 1.3.0-3), libopenjp2-7 (= 2.5.0-2), libp11-kit0 (= 0.25.3-4ubuntu1), libpam-modules (= 1.5.2-9.1ubuntu2), libpam-modules-bin (= 1.5.2-9.1ubuntu2), libpam-runtime (= 1.5.2-9.1ubuntu2), libpam0g (= 1.5.2-9.1ubuntu2), libpciaccess0 (= 0.17-3), libpcre2-8-0 (= 10.42-4ubuntu1), libperl5.38 (= 5.38.2-3), libpipeline1 (= 1.5.7-1), libpixman-1-0 (= 0.42.2-1), libpng16-16 (= 1.6.42-1), libproc2-0 (= 2:4.0.4-2ubuntu1), libpsl5 (= 0.21.2-1build1), libpython3-all-dev (= 3.12.1-0ubuntu1), libpython3-dev (= 3.12.1-0ubuntu1), libpython3-stdlib (= 3.12.1-0ubuntu1), libpython3.11 (= 3.11.8-1), libpython3.11-dev (= 3.11.8-1), libpython3.11-minimal (= 3.11.8-1), libpython3.11-stdlib (= 3.11.8-1), libpython3.12 (= 3.12.2-1), libpython3.12-dev (= 3.12.2-1), libpython3.12-minimal (= 3.12.2-1), libpython3.12-stdlib (= 3.12.2-1), libqhull-r8.0 (= 2020.2-6), libquadmath0 (= 14-20240201-3ubuntu1), libraqm0 (= 0.10.1-1), libreadline8 (= 8.2-3), librtmp1 (= 2.4+20151223.gitfa8646d.1-2build4), libsasl2-2 (= 2.1.28+dfsg1-4), libsasl2-modules-db (= 2.1.28+dfsg1-4), libseccomp2 (= 2.5.5-1ubuntu1), libselinux1 (= 3.5-2build1), libsensors-config (= 1:3.6.0-8), libsensors5 (= 1:3.6.0-8), libsframe1 (= 2.42-2ubuntu1), libsharpyuv0 (= 1.3.2-0.3), libsm6 (= 2:1.2.3-1build2), libsmartcols1 (= 2.39.2-6ubuntu1), libsnappy1v5 (= 1.1.10-1), libsqlite3-0 (= 3.45.1-1), libssh-4 (= 0.10.6-2), libssl3 (= 3.0.10-1ubuntu4), libstdc++-13-dev (= 13.2.0-13ubuntu1), libstdc++6 (= 14-20240201-3ubuntu1), libsub-override-perl (= 0.10-1), libsystemd0 (= 255.2-3ubuntu2), libsz2 (= 1.1.2-1), libtasn1-6 (= 4.19.0-3), libtcl8.6 (= 8.6.13+dfsg-2), libtiff6 (= 4.5.1+git230720-3ubuntu1), libtinfo6 (= 6.4+20240113-1), libtirpc-common (= 1.3.4+ds-1build1), libtirpc-dev (= 1.3.4+ds-1build1), libtirpc3 (= 1.3.4+ds-1build1), libtk8.6 (= 8.6.13-2), libtool (= 2.4.7-7), libtsan2 (= 14-20240201-3ubuntu1), libubsan1 (= 14-20240201-3ubuntu1), libuchardet0 (= 0.0.8-1), libudev1 (= 255.2-3ubuntu2), libunistring5 (= 1.1-2), libunwind8 (= 1.6.2-3), libuuid1 (= 2.39.2-6ubuntu1), libvulkan1 (= 1.3.275.0-1), libwebp7 (= 1.3.2-0.3), libwebpdemux2 (= 1.3.2-0.3), libwebpmux3 (= 1.3.2-0.3), libx11-6 (= 2:1.8.7-1), libx11-data (= 2:1.8.7-1), libx11-xcb1 (= 2:1.8.7-1), libxau6 (= 1:1.0.9-1build5), libxaw7 (= 2:1.0.14-1), libxcb-dri2-0 (= 1.15-1), libxcb-dri3-0 (= 1.15-1), libxcb-glx0 (= 1.15-1), libxcb-present0 (= 1.15-1), libxcb-randr0 (= 1.15-1), libxcb-shm0 (= 1.15-1), libxcb-sync1 (= 1.15-1), libxcb-xfixes0 (= 1.15-1), libxcb1 (= 1.15-1), libxdmcp6 (= 1:1.1.3-0ubuntu5), libxext6 (= 2:1.3.4-1build1), libxfixes3 (= 1:6.0.0-2), libxfont2 (= 1:2.0.6-1), libxft2 (= 2.3.6-1), libxkbfile1 (= 1:1.1.0-1build3), libxml2 (= 2.9.14+dfsg-1.3build3), libxmu6 (= 2:1.1.3-3), libxmuu1 (= 2:1.1.3-3), libxpm4 (= 1:3.5.17-1), libxrandr2 (= 2:1.5.2-2), libxrender1 (= 1:0.9.10-1.1), libxshmfence1 (= 1.3-1build4), libxslt1.1 (= 1.1.35-1), libxss1 (= 1:1.2.3-1build2), libxt6 (= 1:1.2.1-1.1), libxxf86vm1 (= 1:1.1.4-1build3), libzstd1 (= 1.5.5+dfsg2-2), linux-libc-dev (= 6.8.0-7.7), login (= 1:4.13+dfsg1-3ubuntu1), lto-disabled-list (= 46), m4 (= 1.4.19-4), make (= 4.3-4.1build1), man-db (= 2.12.0-3), mawk (= 1.3.4.20240123-1), media-types (= 10.1.0), meson (= 1.3.1-1), ncurses-base (= 6.4+20240113-1), ncurses-bin (= 6.4+20240113-1), netbase (= 6.4), ninja-build (= 1.11.1-2), openssl (= 3.0.10-1ubuntu4), patch (= 2.7.6-7build2), perl (= 5.38.2-3), perl-base (= 5.38.2-3), perl-modules-5.38 (= 5.38.2-3), po-debconf (= 1.0.21+nmu1), procps (= 2:4.0.4-2ubuntu1), pybuild-plugin-pyproject (= 6.20231223), python-babel-localedata (= 2.10.3-3build1), python-is-python3 (= 3.11.4-1), python-matplotlib-data (= 3.6.3-1ubuntu3), python-tables-data (= 3.9.2-1), python3 (= 3.12.1-0ubuntu1), python3-alabaster (= 0.7.12-1), python3-all (= 3.12.1-0ubuntu1), python3-all-dev (= 3.12.1-0ubuntu1), python3-appdirs (= 1.4.4-4), python3-attr (= 23.2.0-1), python3-babel (= 2.10.3-3build1), python3-brotli (= 1.1.0-2), python3-build (= 1.0.3-2), python3-certifi (= 2023.11.17-1), python3-chardet (= 5.2.0+dfsg-1), python3-contourpy (= 1.0.7-1build2), python3-cpuinfo (= 9.0.0-1), python3-cycler (= 0.11.0-1), python3-dateutil (= 2.8.2-3), python3-decorator (= 5.1.1-5), python3-deepdiff (= 6.7.1-1), python3-dev (= 3.12.1-0ubuntu1), python3-distutils (= 3.11.5-1), python3-docutils (= 0.20.1+dfsg-3), python3-fonttools (= 4.46.0-1), python3-fs (= 2.4.16-3), python3-h5py (= 3.10.0-1ubuntu1), python3-h5py-serial (= 3.10.0-1ubuntu1), python3-idna (= 3.3-2), python3-imageio (= 2.33.1-1), python3-imagesize (= 1.4.1-1), python3-iniconfig (= 1.1.1-2), python3-installer (= 0.7.0+dfsg1-2), python3-jinja2 (= 3.1.2-1ubuntu1), python3-joblib (= 1.3.2-1), python3-jsonpickle (= 3.0.2+dfsg-1), python3-kiwisolver (= 1.4.4-1build2), python3-lazy-loader (= 0.3-1), python3-lib2to3 (= 3.11.5-1), python3-lxml (= 5.1.0-1), python3-lz4 (= 4.0.2+dfsg-1build2), python3-markupsafe (= 2.1.4-1), python3-matplotlib (= 3.6.3-1ubuntu3), python3-mesonpy (= 0.15.0-1), python3-minimal (= 3.12.1-0ubuntu1), python3-mpmath (= 1.2.1-2), python3-networkx (= 2.8.8-1ubuntu1), python3-nibabel (= 5.2.0-2), python3-numexpr (= 2.9.0-1), python3-numpy (= 1:1.24.2-2), python3-numpydoc (= 1.6.0-1), python3-ordered-set (= 4.1.0-1), python3-packaging (= 23.2-1), python3-pandas (= 2.1.4+dfsg-4ubuntu1), python3-pandas-lib (= 2.1.4+dfsg-4ubuntu1), python3-pil (= 10.2.0-1), python3-pil.imagetk (= 10.2.0-1), python3-pkg-resources (= 68.1.2-2), python3-pluggy (= 1.4.0-1), python3-pygments (= 2.17.2+dfsg-1), python3-pyparsing (= 3.1.1-1), python3-pyproject-hooks (= 1.0.0-2), python3-pyproject-metadata (= 0.7.1-1), python3-pytest (= 7.4.4-2), python3-requests (= 2.31.0+dfsg-1ubuntu1), python3-roman (= 3.3-3), python3-scipy (= 1.10.1-10build1), python3-setuptools (= 68.1.2-2), python3-setuptools-scm (= 8.0.4-2), python3-six (= 1.16.0-4), python3-skimage (= 0.22.0-3), python3-skimage-lib (= 0.22.0-3), python3-sklearn (= 1.2.1+dfsg-1build2), python3-sklearn-lib (= 1.2.1+dfsg-1build2), python3-snowballstemmer (= 2.2.0-4), python3-sphinx (= 7.2.6-3), python3-sphinx-design (= 0.5.0-2), python3-sympy (= 1.12-7), python3-tables (= 3.9.2-1), python3-tables-lib (= 3.9.2-1), python3-tabulate (= 0.8.10-1), python3-threadpoolctl (= 3.1.0-1), python3-tifffile (= 20240130-1), python3-tk (= 3.11.5-1), python3-toml (= 0.10.2-1), python3-tqdm (= 4.64.1-2), python3-trx-python (= 0.2.9-1), python3-typing-extensions (= 4.9.0-1), python3-tz (= 2023.4-1), python3-ufolib2 (= 0.16.0+dfsg1-1), python3-urllib3 (= 2.0.7-1), python3-wheel (= 0.42.0-1), python3.11 (= 3.11.8-1), python3.11-dev (= 3.11.8-1), python3.11-minimal (= 3.11.8-1), python3.12 (= 3.12.2-1), python3.12-dev (= 3.12.2-1), python3.12-minimal (= 3.12.2-1), readline-common (= 8.2-3), rpcsvc-proto (= 1.4.2-0ubuntu6), sed (= 4.9-2), sensible-utils (= 0.0.20), sgml-base (= 1.31), sphinx-common (= 7.2.6-3), sysvinit-utils (= 3.08-3ubuntu1), tar (= 1.35+dfsg-3), tk8.6-blt2.5 (= 2.5.3+dfsg-7), tzdata (= 2024a-1ubuntu1), unicode-data (= 15.1.0-1), util-linux (= 2.39.2-6ubuntu1), x11-common (= 1:7.7+23ubuntu2), x11-xkb-utils (= 7.7+8), xauth (= 1:1.1.2-1), xkb-data (= 2.38-2), xml-core (= 0.19), xserver-common (= 2:21.1.11-2ubuntu1), xvfb (= 2:21.1.11-2ubuntu1), xz-utils (= 5.4.5-0.3), zlib1g (= 1:1.3.dfsg-3ubuntu1), zlib1g-dev (= 1:1.3.dfsg-3ubuntu1) Environment: DEB_BUILD_OPTIONS="parallel=4" DEB_BUILD_PROFILES="noudeb" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1707769196" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ python-dipy-doc_1.8.0-2ubuntu1_all.deb -------------------------------------- new Debian package, version 2.0. size 2761306 bytes: control archive=5284 bytes. 672 bytes, 18 lines control 17275 bytes, 178 lines md5sums Package: python-dipy-doc Source: dipy Version: 1.8.0-2ubuntu1 Architecture: all Maintainer: Ubuntu Developers Installed-Size: 10963 Depends: libjs-jquery, libjs-mathjax, libjs-sphinxdoc, node-mathjax-full Suggests: python3-dipy Section: doc Priority: optional Multi-Arch: foreign Homepage: https://dipy.org Description: Python library for the analysis of diffusion MRI datasets -- documentation DIPY is a library for the analysis of diffusion magnetic resonance imaging data. . This package provides the documentation in HTML format. 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Description: Python library for the analysis of diffusion MRI datasets -- Python3 extensions DIPY is a library for the analysis of diffusion magnetic resonance imaging data. . This package provides architecture-dependent builds of the extensions for Python3. 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-rw-r--r-- root/root 4483 2024-02-12 20:19 ./usr/share/doc/python3-dipy-lib/changelog.Debian.gz -rw-r--r-- root/root 2041 2024-01-15 19:49 ./usr/share/doc/python3-dipy-lib/copyright python3-dipy_1.8.0-2ubuntu1_all.deb ----------------------------------- new Debian package, version 2.0. size 3506480 bytes: control archive=14062 bytes. 1911 bytes, 37 lines control 46773 bytes, 521 lines md5sums 259 bytes, 12 lines * postinst #!/bin/sh 372 bytes, 12 lines * prerm #!/bin/sh Package: python3-dipy Source: dipy Version: 1.8.0-2ubuntu1 Architecture: all Maintainer: Ubuntu Developers Installed-Size: 10253 Depends: python3-h5py (>= 3.1.0), python3-nibabel, python3-numpy, python3-packaging, python3-scipy, python3-tqdm, python3-trx-python, python3:any, python3-pandas, python3-dipy-lib (>= 1.8.0-2ubuntu1) Recommends: python3-matplotlib, python3-vtk9, python3-tables, python3-sklearn Suggests: python-dipy-doc Section: python Priority: optional Homepage: https://dipy.org Description: Python library for the analysis of diffusion MRI datasets DIPY is a software project for computational neuroanatomy. It focuses on diffusion magnetic resonance imaging (dMRI) analysis and tractography but also contains implementations of other computational imaging methods such as denoising and registration that are applicable to the greater medical imaging and image processing communities. Additionally, DIPY is an international project which brings together scientists across labs and countries to share their state-of-the-art code and expertise in the same codebase, accelerating scientific research in medical imaging. . Here are some of the highlights: - Reconstruction algorithms: CSD, DSI, GQI, DTI, DKI, QBI, SHORE and MAPMRI - Fiber tracking algorithms: deterministic and probabilistic - Native linear and nonlinear registration of images - Fast operations on streamlines (selection, resampling, registration) - Tractography segmentation and clustering - Many image operations, e.g., reslicing or denoising with NLMEANS - Estimation of distances/correspondences between streamlines and connectivity matrices - Interactive visualization of streamlines in the space of images . This package contains the Python 3 version. 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+------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: binary Build-Space: 406788 Build-Time: 3191 Distribution: noble-proposed Host Architecture: amd64 Install-Time: 76 Job: dipy_1.8.0-2ubuntu1.dsc Machine Architecture: amd64 Package: dipy Package-Time: 3268 Source-Version: 1.8.0-2ubuntu1 Space: 406788 Status: successful Version: 1.8.0-2ubuntu1 -------------------------------------------------------------------------------- Finished at 2024-02-12T21:19:42Z Build needed 00:54:28, 406788k disk space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=noble --arch=amd64 PACKAGEBUILD-27766904 Scanning for processes to kill in build PACKAGEBUILD-27766904