discosnp 2.3.0-2 source package in Ubuntu


discosnp (2.3.0-2) unstable; urgency=medium

  * Rebuild against libgatbcore2
    Closes: #921843
  * Test-Depends: python

 -- Andreas Tille <email address hidden>  Sun, 10 Feb 2019 15:12:20 +0100

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Uploaded by:
Debian Med on 2019-02-10
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Original maintainer:
Debian Med
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Disco proposed on 2019-02-10 universe misc


File Size SHA-256 Checksum
discosnp_2.3.0-2.dsc 2.1 KiB f68700dd77279de694ce0ae314afcf3f21da03dc463212cfc9b2721702c2c22e
discosnp_2.3.0.orig.tar.gz 734.8 KiB ebbfc7c000b95d888bc3071c95a489cd95b2dd3c4c7e52bee378d4c4f4eaee50
discosnp_2.3.0-2.debian.tar.xz 19.2 KiB d82a9c48d5326ff7f969244207017003235a6d1f2caf124dac22544a668149d6

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Binary packages built by this source

discosnp: discovering Single Nucleotide Polymorphism from raw set(s) of reads

 Software discoSnp is designed for discovering Single Nucleotide
 Polymorphism (SNP) from raw set(s) of reads obtained with Next Generation
 Sequencers (NGS).
 Note that number of input read sets is not constrained, it can be one, two,
 or more. Note also that no other data as reference genome or annotations
 are needed.
 The software is composed by two modules. First module, kissnp2, detects SNPs
 from read sets. A second module, kissreads, enhance the kissnp2 results by
 computing per read set and for each found SNP:
  1) its mean read coverage
  2) the (phred) quality of reads generating the polymorphism.
 This program is superseded by DiscoSnp++.

discosnp-dbgsym: debug symbols for discosnp