https://launchpad.net/ubuntu/+source/dnaclust/3-7build3/+build/27576352 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos03-riscv64-026 5.19.0-1021-generic #23~22.04.1-Ubuntu SMP Thu Jun 22 12:49:35 UTC 2023 riscv64 Buildd toolchain package versions: launchpad-buildd_235~645~ubuntu22.04.1 python3-lpbuildd_235~645~ubuntu22.04.1 sbuild_0.81.2ubuntu6 git-build-recipe_0.3.6 git_1:2.34.1-1ubuntu1.10 dpkg-dev_1.21.1ubuntu2.2 python3-debian_0.1.43ubuntu1.1. Syncing the system clock with the buildd NTP service... 19 Dec 16:52:52 ntpdate[2276]: adjust time server 10.211.37.1 offset +0.000050 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=noble --arch=riscv64 PACKAGEBUILD-27576352 --image-type chroot /home/buildd/filecache-default/20a3246b7a16d5658607d7f37229fcda30a33651 Creating target for build PACKAGEBUILD-27576352 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=noble --arch=riscv64 PACKAGEBUILD-27576352 Starting target for build PACKAGEBUILD-27576352 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=noble --arch=riscv64 PACKAGEBUILD-27576352 'deb http://ftpmaster.internal/ubuntu noble main universe' 'deb http://ftpmaster.internal/ubuntu noble-security main universe' 'deb http://ftpmaster.internal/ubuntu noble-updates main universe' 'deb http://ftpmaster.internal/ubuntu noble-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-27576352 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=noble --arch=riscv64 PACKAGEBUILD-27576352 Updating target for build PACKAGEBUILD-27576352 Get:1 http://ftpmaster.internal/ubuntu noble InRelease [240 kB] Get:2 http://ftpmaster.internal/ubuntu noble-security InRelease [74.9 kB] Get:3 http://ftpmaster.internal/ubuntu noble-updates InRelease [74.9 kB] Get:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease [102 kB] Get:5 http://ftpmaster.internal/ubuntu noble/main riscv64 Packages [1340 kB] Get:6 http://ftpmaster.internal/ubuntu noble/main Translation-en [515 kB] Get:7 http://ftpmaster.internal/ubuntu noble/universe riscv64 Packages [14.2 MB] Get:8 http://ftpmaster.internal/ubuntu noble/universe Translation-en [6031 kB] Get:9 http://ftpmaster.internal/ubuntu noble-proposed/main riscv64 Packages [101 kB] Get:10 http://ftpmaster.internal/ubuntu noble-proposed/main Translation-en [47.1 kB] Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe riscv64 Packages [1042 kB] Get:12 http://ftpmaster.internal/ubuntu noble-proposed/universe Translation-en [326 kB] Fetched 24.1 MB in 25s (950 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following package was automatically installed and is no longer required: libunistring2 Use 'sudo apt autoremove' to remove it. The following NEW packages will be installed: libunistring5 The following packages will be upgraded: apt apt-utils base-files base-passwd bash bash-completion binutils binutils-common binutils-riscv64-linux-gnu bsdextrautils bsdutils coreutils cpp cpp-13 debianutils diffutils dpkg dpkg-dev fakeroot g++ g++-13 gcc gcc-13 gcc-13-base grep init init-system-helpers krb5-locales libapparmor1 libapt-pkg6.0 libargon2-1 libasan8 libatomic1 libaudit-common libaudit1 libbinutils libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcc1-0 libcryptsetup12 libctf-nobfd0 libctf0 libdb5.3 libdebconfclient0 libdpkg-perl libfakeroot libfdisk1 libffi8 libgcc-13-dev libgcc-s1 libgdbm-compat4 libgdbm6 libgnutls30 libgomp1 libgpg-error-l10n libgpg-error0 libgssapi-krb5-2 libidn2-0 libk5crypto3 libkmod2 libkrb5-3 libkrb5support0 liblzma5 libmount1 libncursesw6 libnsl-dev libnsl2 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpcre2-8-0 libperl5.36 libpng16-16 libproc2-0 libreadline8 libseccomp2 libselinux1 libsemanage-common libsemanage2 libsepol2 libsframe1 libsmartcols1 libsqlite3-0 libssl3 libstdc++-13-dev libstdc++6 libsystemd-shared libsystemd0 libtinfo6 libtirpc-common libtirpc-dev libtirpc3 libudev1 libuuid1 libxxhash0 libzstd1 linux-libc-dev login lto-disabled-list mawk mount ncurses-base ncurses-bin openssl optipng passwd perl perl-base perl-modules-5.36 pinentry-curses procps readline-common systemd systemd-dev systemd-sysv sysvinit-utils tar ubuntu-keyring util-linux uuid-runtime xz-utils zlib1g 128 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 106 MB of archives. After this operation, 7642 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu noble/main riscv64 libnsl-dev riscv64 1.3.0-3 [135 kB] Get:2 http://ftpmaster.internal/ubuntu noble/main riscv64 libc6-dev riscv64 2.38-3ubuntu1 [3401 kB] Get:3 http://ftpmaster.internal/ubuntu noble/main riscv64 libc-dev-bin riscv64 2.38-3ubuntu1 [19.2 kB] Get:4 http://ftpmaster.internal/ubuntu noble/main riscv64 libtirpc-common all 1.3.4+ds-1 [7920 B] Get:5 http://ftpmaster.internal/ubuntu noble/main riscv64 libtirpc-dev riscv64 1.3.4+ds-1 [344 kB] Get:6 http://ftpmaster.internal/ubuntu noble/main riscv64 libgssapi-krb5-2 riscv64 1.20.1-5build1 [148 kB] Get:7 http://ftpmaster.internal/ubuntu noble/main riscv64 libkrb5-3 riscv64 1.20.1-5build1 [377 kB] Get:8 http://ftpmaster.internal/ubuntu noble/main riscv64 libk5crypto3 riscv64 1.20.1-5build1 [106 kB] Get:9 http://ftpmaster.internal/ubuntu noble/main riscv64 libkrb5support0 riscv64 1.20.1-5build1 [35.9 kB] Get:10 http://ftpmaster.internal/ubuntu noble/main riscv64 libssl3 riscv64 3.0.10-1ubuntu3 [1693 kB] Get:11 http://ftpmaster.internal/ubuntu noble/main riscv64 libtirpc3 riscv64 1.3.4+ds-1 [88.4 kB] Get:12 http://ftpmaster.internal/ubuntu noble/main riscv64 libnsl2 riscv64 1.3.0-3 [42.0 kB] Get:13 http://ftpmaster.internal/ubuntu noble-proposed/main riscv64 linux-libc-dev riscv64 6.6.0-14.14 [1550 kB] Get:14 http://ftpmaster.internal/ubuntu noble/main riscv64 libcc1-0 riscv64 13.2.0-9ubuntu1 [45.5 kB] Get:15 http://ftpmaster.internal/ubuntu noble/main riscv64 libctf0 riscv64 2.41.50.20231214-1ubuntu1 [85.6 kB] Get:16 http://ftpmaster.internal/ubuntu noble/main riscv64 libctf-nobfd0 riscv64 2.41.50.20231214-1ubuntu1 [89.4 kB] Get:17 http://ftpmaster.internal/ubuntu noble/main riscv64 binutils-riscv64-linux-gnu riscv64 2.41.50.20231214-1ubuntu1 [918 kB] Get:18 http://ftpmaster.internal/ubuntu noble/main riscv64 libbinutils riscv64 2.41.50.20231214-1ubuntu1 [490 kB] Get:19 http://ftpmaster.internal/ubuntu noble/main riscv64 binutils-common riscv64 2.41.50.20231214-1ubuntu1 [223 kB] Get:20 http://ftpmaster.internal/ubuntu noble/main riscv64 binutils riscv64 2.41.50.20231214-1ubuntu1 [3000 B] Get:21 http://ftpmaster.internal/ubuntu noble/main riscv64 gcc-13-base riscv64 13.2.0-9ubuntu1 [45.2 kB] Get:22 http://ftpmaster.internal/ubuntu noble/main riscv64 libgcc-s1 riscv64 13.2.0-9ubuntu1 [57.2 kB] Get:23 http://ftpmaster.internal/ubuntu noble/main riscv64 libgomp1 riscv64 13.2.0-9ubuntu1 [139 kB] Get:24 http://ftpmaster.internal/ubuntu noble/main riscv64 libatomic1 riscv64 13.2.0-9ubuntu1 [9504 B] Get:25 http://ftpmaster.internal/ubuntu noble/main riscv64 libasan8 riscv64 13.2.0-9ubuntu1 [2510 kB] Get:26 http://ftpmaster.internal/ubuntu noble/main riscv64 g++-13 riscv64 13.2.0-9ubuntu1 [11.9 MB] Get:27 http://ftpmaster.internal/ubuntu noble/main riscv64 libstdc++-13-dev riscv64 13.2.0-9ubuntu1 [5460 kB] Get:28 http://ftpmaster.internal/ubuntu noble/main riscv64 libgcc-13-dev riscv64 13.2.0-9ubuntu1 [3140 kB] Get:29 http://ftpmaster.internal/ubuntu noble/main riscv64 gcc-13 riscv64 13.2.0-9ubuntu1 [20.8 MB] Get:30 http://ftpmaster.internal/ubuntu noble/main riscv64 cpp-13 riscv64 13.2.0-9ubuntu1 [10.5 MB] Get:31 http://ftpmaster.internal/ubuntu noble/main riscv64 libstdc++6 riscv64 13.2.0-9ubuntu1 [785 kB] Get:32 http://ftpmaster.internal/ubuntu noble-proposed/main riscv64 zlib1g riscv64 1:1.3.dfsg-3ubuntu1 [61.1 kB] Get:33 http://ftpmaster.internal/ubuntu noble/main riscv64 libsframe1 riscv64 2.41.50.20231214-1ubuntu1 [14.4 kB] Get:34 http://ftpmaster.internal/ubuntu noble/main riscv64 libzstd1 riscv64 1.5.5+dfsg2-2 [349 kB] Get:35 http://ftpmaster.internal/ubuntu noble/main riscv64 libc6 riscv64 2.38-3ubuntu1 [2742 kB] Get:36 http://ftpmaster.internal/ubuntu noble/main riscv64 base-files riscv64 13ubuntu5 [73.4 kB] Get:37 http://ftpmaster.internal/ubuntu noble/main riscv64 debianutils riscv64 5.14 [88.8 kB] Get:38 http://ftpmaster.internal/ubuntu noble/main riscv64 bash riscv64 5.2.21-2ubuntu1 [735 kB] Get:39 http://ftpmaster.internal/ubuntu noble/main riscv64 bsdutils riscv64 1:2.39.2-6ubuntu1 [113 kB] Get:40 http://ftpmaster.internal/ubuntu noble/main riscv64 coreutils riscv64 9.4-2ubuntu1 [1471 kB] Get:41 http://ftpmaster.internal/ubuntu noble/main riscv64 diffutils riscv64 1:3.10-1 [180 kB] Get:42 http://ftpmaster.internal/ubuntu noble/main riscv64 liblzma5 riscv64 5.4.5-0.1 [128 kB] Get:43 http://ftpmaster.internal/ubuntu noble/main riscv64 libapparmor1 riscv64 4.0.0~alpha2-0ubuntu7 [50.0 kB] Get:44 http://ftpmaster.internal/ubuntu noble/main riscv64 libaudit-common all 1:3.1.2-1 [5512 B] Get:45 http://ftpmaster.internal/ubuntu noble/main riscv64 libcap-ng0 riscv64 0.8.3-3 [15.2 kB] Get:46 http://ftpmaster.internal/ubuntu noble/main riscv64 libaudit1 riscv64 1:3.1.2-1 [47.5 kB] Get:47 http://ftpmaster.internal/ubuntu noble/main riscv64 libblkid1 riscv64 2.39.2-6ubuntu1 [199 kB] Get:48 http://ftpmaster.internal/ubuntu noble/main riscv64 libkmod2 riscv64 30+20230601-2ubuntu1 [52.6 kB] Get:49 http://ftpmaster.internal/ubuntu noble/main riscv64 libpcre2-8-0 riscv64 10.42-4ubuntu1 [149 kB] Get:50 http://ftpmaster.internal/ubuntu noble/main riscv64 libselinux1 riscv64 3.5-1build2 [83.2 kB] Get:51 http://ftpmaster.internal/ubuntu noble/main riscv64 libmount1 riscv64 2.39.2-6ubuntu1 [207 kB] Get:52 http://ftpmaster.internal/ubuntu noble/main riscv64 libpam0g riscv64 1.5.2-9.1ubuntu1 [65.9 kB] Get:53 http://ftpmaster.internal/ubuntu noble-proposed/main riscv64 libseccomp2 riscv64 2.5.4-2ubuntu1 [51.5 kB] Get:54 http://ftpmaster.internal/ubuntu noble-proposed/main riscv64 systemd-sysv riscv64 255-1ubuntu1 [11.7 kB] Get:55 http://ftpmaster.internal/ubuntu noble-proposed/main riscv64 systemd-dev all 255-1ubuntu1 [98.5 kB] Get:56 http://ftpmaster.internal/ubuntu noble-proposed/main riscv64 systemd riscv64 255-1ubuntu1 [3565 kB] Get:57 http://ftpmaster.internal/ubuntu noble-proposed/main riscv64 libsystemd-shared riscv64 255-1ubuntu1 [2175 kB] Get:58 http://ftpmaster.internal/ubuntu noble/main riscv64 libargon2-1 riscv64 0~20190702+dfsg-4 [23.7 kB] Get:59 http://ftpmaster.internal/ubuntu noble/main riscv64 libuuid1 riscv64 2.39.2-6ubuntu1 [36.2 kB] Get:60 http://ftpmaster.internal/ubuntu noble/main riscv64 libcryptsetup12 riscv64 2:2.6.1-5ubuntu1 [246 kB] Get:61 http://ftpmaster.internal/ubuntu noble/main riscv64 libfdisk1 riscv64 2.39.2-6ubuntu1 [234 kB] Get:62 http://ftpmaster.internal/ubuntu noble/main riscv64 mount riscv64 2.39.2-6ubuntu1 [150 kB] Get:63 http://ftpmaster.internal/ubuntu noble-proposed/main riscv64 libsystemd0 riscv64 255-1ubuntu1 [452 kB] Get:64 http://ftpmaster.internal/ubuntu noble-proposed/main riscv64 libudev1 riscv64 255-1ubuntu1 [176 kB] Get:65 http://ftpmaster.internal/ubuntu noble/main riscv64 libxxhash0 riscv64 0.8.2-2 [43.7 kB] Get:66 http://ftpmaster.internal/ubuntu noble-proposed/main riscv64 libapt-pkg6.0 riscv64 2.7.7 [989 kB] Get:67 http://ftpmaster.internal/ubuntu noble/main riscv64 tar riscv64 1.34+dfsg-1.2ubuntu2 [305 kB] Get:68 http://ftpmaster.internal/ubuntu noble/main riscv64 dpkg riscv64 1.22.1ubuntu5 [1393 kB] Get:69 http://ftpmaster.internal/ubuntu noble/main riscv64 grep riscv64 3.11-3 [167 kB] Get:70 http://ftpmaster.internal/ubuntu noble/main riscv64 login riscv64 1:4.13+dfsg1-3ubuntu1 [202 kB] Get:71 http://ftpmaster.internal/ubuntu noble/main riscv64 ncurses-bin riscv64 6.4+20231209-1 [184 kB] Get:72 http://ftpmaster.internal/ubuntu noble/main riscv64 libperl5.36 riscv64 5.36.0-10ubuntu1 [4337 kB] Get:73 http://ftpmaster.internal/ubuntu noble/main riscv64 perl riscv64 5.36.0-10ubuntu1 [235 kB] Get:74 http://ftpmaster.internal/ubuntu noble/main riscv64 perl-base riscv64 5.36.0-10ubuntu1 [1760 kB] Get:75 http://ftpmaster.internal/ubuntu noble/main riscv64 perl-modules-5.36 all 5.36.0-10ubuntu1 [2984 kB] Get:76 http://ftpmaster.internal/ubuntu noble/main riscv64 libdb5.3 riscv64 5.3.28+dfsg2-4 [783 kB] Get:77 http://ftpmaster.internal/ubuntu noble/main riscv64 libgdbm6 riscv64 1.23-5 [34.3 kB] Get:78 http://ftpmaster.internal/ubuntu noble/main riscv64 libgdbm-compat4 riscv64 1.23-5 [6414 B] Get:79 http://ftpmaster.internal/ubuntu noble/main riscv64 util-linux riscv64 2.39.2-6ubuntu1 [1314 kB] Get:80 http://ftpmaster.internal/ubuntu noble/main riscv64 libdebconfclient0 riscv64 0.271ubuntu1 [11.1 kB] Get:81 http://ftpmaster.internal/ubuntu noble/main riscv64 base-passwd riscv64 3.6.3 [52.1 kB] Get:82 http://ftpmaster.internal/ubuntu noble-proposed/main riscv64 init-system-helpers all 1.66ubuntu1 [39.4 kB] Get:83 http://ftpmaster.internal/ubuntu noble/main riscv64 libc-bin riscv64 2.38-3ubuntu1 [601 kB] Get:84 http://ftpmaster.internal/ubuntu noble/main riscv64 ncurses-base all 6.4+20231209-1 [25.2 kB] Get:85 http://ftpmaster.internal/ubuntu noble/main riscv64 sysvinit-utils riscv64 3.08-3ubuntu1 [34.5 kB] Get:86 http://ftpmaster.internal/ubuntu noble-proposed/main riscv64 apt riscv64 2.7.7 [1338 kB] Get:87 http://ftpmaster.internal/ubuntu noble-proposed/main riscv64 apt-utils riscv64 2.7.7 [225 kB] Get:88 http://ftpmaster.internal/ubuntu noble/main riscv64 ubuntu-keyring all 2023.11.28.1 [11.1 kB] Get:89 http://ftpmaster.internal/ubuntu noble/main riscv64 libunistring5 riscv64 1.1-2 [544 kB] Get:90 http://ftpmaster.internal/ubuntu noble/main riscv64 libidn2-0 riscv64 2.3.4-1build1 [99.3 kB] Get:91 http://ftpmaster.internal/ubuntu noble/main riscv64 libffi8 riscv64 3.4.4-2 [22.5 kB] Get:92 http://ftpmaster.internal/ubuntu noble/main riscv64 libp11-kit0 riscv64 0.25.3-2ubuntu2 [308 kB] Get:93 http://ftpmaster.internal/ubuntu noble/main riscv64 libgnutls30 riscv64 3.8.1-4ubuntu6 [995 kB] Get:94 http://ftpmaster.internal/ubuntu noble/main riscv64 libpam-modules-bin riscv64 1.5.2-9.1ubuntu1 [50.2 kB] Get:95 http://ftpmaster.internal/ubuntu noble/main riscv64 libpam-modules riscv64 1.5.2-9.1ubuntu1 [286 kB] Get:96 http://ftpmaster.internal/ubuntu noble-proposed/main riscv64 init riscv64 1.66ubuntu1 [6190 B] Get:97 http://ftpmaster.internal/ubuntu noble/main riscv64 libsmartcols1 riscv64 2.39.2-6ubuntu1 [142 kB] Get:98 http://ftpmaster.internal/ubuntu noble/main riscv64 uuid-runtime riscv64 2.39.2-6ubuntu1 [48.3 kB] Get:99 http://ftpmaster.internal/ubuntu noble/main riscv64 libgpg-error-l10n all 1.47-3build1 [8024 B] Get:100 http://ftpmaster.internal/ubuntu noble/main riscv64 libgpg-error0 riscv64 1.47-3build1 [75.7 kB] Get:101 http://ftpmaster.internal/ubuntu noble/main riscv64 libpam-runtime all 1.5.2-9.1ubuntu1 [41.5 kB] Get:102 http://ftpmaster.internal/ubuntu noble/main riscv64 libsemanage-common all 3.5-1build1 [9982 B] Get:103 http://ftpmaster.internal/ubuntu noble/main riscv64 libsepol2 riscv64 3.5-2 [312 kB] Get:104 http://ftpmaster.internal/ubuntu noble/main riscv64 libsemanage2 riscv64 3.5-1build1 [97.7 kB] Get:105 http://ftpmaster.internal/ubuntu noble/main riscv64 libncursesw6 riscv64 6.4+20231209-1 [150 kB] Get:106 http://ftpmaster.internal/ubuntu noble/main riscv64 libtinfo6 riscv64 6.4+20231209-1 [106 kB] Get:107 http://ftpmaster.internal/ubuntu noble/main riscv64 passwd riscv64 1:4.13+dfsg1-3ubuntu1 [857 kB] Get:108 http://ftpmaster.internal/ubuntu noble/main riscv64 libproc2-0 riscv64 2:4.0.4-2ubuntu1 [58.9 kB] Get:109 http://ftpmaster.internal/ubuntu noble/main riscv64 mawk riscv64 1.3.4.20231126-1 [126 kB] Get:110 http://ftpmaster.internal/ubuntu noble/main riscv64 procps riscv64 2:4.0.4-2ubuntu1 [712 kB] Get:111 http://ftpmaster.internal/ubuntu noble/main riscv64 krb5-locales all 1.20.1-5build1 [13.7 kB] Get:112 http://ftpmaster.internal/ubuntu noble/main riscv64 readline-common all 8.2-3 [56.2 kB] Get:113 http://ftpmaster.internal/ubuntu noble/main riscv64 libreadline8 riscv64 8.2-3 [151 kB] Get:114 http://ftpmaster.internal/ubuntu noble/main riscv64 libsqlite3-0 riscv64 3.44.2-1 [703 kB] Get:115 http://ftpmaster.internal/ubuntu noble/main riscv64 openssl riscv64 3.0.10-1ubuntu3 [1170 kB] Get:116 http://ftpmaster.internal/ubuntu noble/main riscv64 bash-completion all 1:2.11-8 [180 kB] Get:117 http://ftpmaster.internal/ubuntu noble/main riscv64 bsdextrautils riscv64 2.39.2-6ubuntu1 [91.3 kB] Get:118 http://ftpmaster.internal/ubuntu noble/main riscv64 libpng16-16 riscv64 1.6.40-2 [189 kB] Get:119 http://ftpmaster.internal/ubuntu noble/main riscv64 xz-utils riscv64 5.4.5-0.1 [268 kB] Get:120 http://ftpmaster.internal/ubuntu noble/main riscv64 g++ riscv64 4:13.2.0-2ubuntu1 [1110 B] Get:121 http://ftpmaster.internal/ubuntu noble/main riscv64 gcc riscv64 4:13.2.0-2ubuntu1 [5192 B] Get:122 http://ftpmaster.internal/ubuntu noble/main riscv64 cpp riscv64 4:13.2.0-2ubuntu1 [29.0 kB] Get:123 http://ftpmaster.internal/ubuntu noble/main riscv64 dpkg-dev all 1.22.1ubuntu5 [1147 kB] Get:124 http://ftpmaster.internal/ubuntu noble/main riscv64 libdpkg-perl all 1.22.1ubuntu5 [286 kB] Get:125 http://ftpmaster.internal/ubuntu noble/main riscv64 lto-disabled-list all 44 [12.4 kB] Get:126 http://ftpmaster.internal/ubuntu noble/main riscv64 libfakeroot riscv64 1.32.2-1 [33.3 kB] Get:127 http://ftpmaster.internal/ubuntu noble/main riscv64 fakeroot riscv64 1.32.2-1 [77.8 kB] Get:128 http://ftpmaster.internal/ubuntu noble/main riscv64 optipng riscv64 0.7.7-3 [86.9 kB] Get:129 http://ftpmaster.internal/ubuntu noble/main riscv64 pinentry-curses riscv64 1.2.1-3ubuntu1 [39.5 kB] Preconfiguring packages ... 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Setting up dpkg-dev (1.22.1ubuntu5) ... Setting up libnsl-dev:riscv64 (1.3.0-3) ... Setting up libc6-dev:riscv64 (2.38-3ubuntu1) ... Setting up libstdc++-13-dev:riscv64 (13.2.0-9ubuntu1) ... Setting up g++-13 (13.2.0-9ubuntu1) ... Setting up g++ (4:13.2.0-2ubuntu1) ... Processing triggers for libc-bin (2.38-3ubuntu1) ... Processing triggers for debianutils (5.14) ... RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-27576352 riscv64 noble-proposed -c chroot:build-PACKAGEBUILD-27576352 --arch=riscv64 --dist=noble-proposed --nolog dnaclust_3-7build3.dsc Initiating build PACKAGEBUILD-27576352 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 5.19.0-1021-generic #23~22.04.1-Ubuntu SMP Thu Jun 22 12:49:35 UTC 2023 riscv64 sbuild (Debian sbuild) 0.81.2ubuntu6 (16 February 2022) on bos03-riscv64-026.buildd +==============================================================================+ | dnaclust 3-7build3 (riscv64) Tue, 19 Dec 2023 16:58:43 +0000 | +==============================================================================+ Package: dnaclust Version: 3-7build3 Source Version: 3-7build3 Distribution: noble-proposed Machine Architecture: riscv64 Host Architecture: riscv64 Build Architecture: riscv64 Build Type: any I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-27576352/chroot-autobuild' with '<>' I: NOTICE: Log filtering will replace 'build/dnaclust-2bjOPw/resolver-Bv25Q1' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- dnaclust_3-7build3.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/dnaclust-2bjOPw/dnaclust-3' with '<>' I: NOTICE: Log filtering will replace 'build/dnaclust-2bjOPw' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), libboost-dev, libboost-program-options-dev, rename, build-essential, fakeroot Filtered Build-Depends: debhelper-compat (= 12), libboost-dev, libboost-program-options-dev, rename, build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [395 B] Get:5 copy:/<>/apt_archive ./ Packages [479 B] Fetched 1831 B in 0s (5212 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: apt-utils bash-completion ca-certificates debconf-i18n krb5-locales libgpg-error-l10n libgpm2 libip4tc2 liblocale-gettext-perl libnss-nis libnss-nisplus libtext-charwidth-perl libtext-iconv-perl libtext-wrapi18n-perl libunistring2 openssl psmisc uuid-runtime Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev debhelper debugedit dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libboost-dev libboost-program-options-dev libboost-program-options1.83-dev libboost-program-options1.83.0 libboost1.83-dev libdebhelper-perl libdw1 libelf1 libfile-stripnondeterminism-perl libicu74 libmagic-mgc libmagic1 libpipeline1 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db po-debconf rename Suggested packages: autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc libasprintf-dev libgettextpo-dev groff libboost-doc libboost1.83-doc libboost-atomic1.83-dev libboost-chrono1.83-dev libboost-container1.83-dev libboost-context1.83-dev libboost-contract1.83-dev libboost-coroutine1.83-dev libboost-date-time1.83-dev libboost-exception1.83-dev libboost-fiber1.83-dev libboost-filesystem1.83-dev libboost-graph1.83-dev libboost-graph-parallel1.83-dev libboost-iostreams1.83-dev libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev libboost-mpi1.83-dev libboost-mpi-python1.83-dev libboost-numpy1.83-dev libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev libboost-serialization1.83-dev libboost-stacktrace1.83-dev libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev libboost-nowide1.83-dev libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libarchive-cpio-perl libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev debhelper debugedit dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libboost-dev libboost-program-options-dev libboost-program-options1.83-dev libboost-program-options1.83.0 libboost1.83-dev libdebhelper-perl libdw1 libelf1 libfile-stripnondeterminism-perl libicu74 libmagic-mgc libmagic1 libpipeline1 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db po-debconf rename sbuild-build-depends-main-dummy 0 upgraded, 37 newly installed, 0 to remove and 0 not upgraded. Need to get 31.3 MB of archives. After this operation, 241 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [694 B] Get:2 http://ftpmaster.internal/ubuntu noble/main riscv64 libelf1 riscv64 0.190-1 [61.0 kB] Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main riscv64 libicu74 riscv64 74.2-1ubuntu1 [10.9 MB] Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main riscv64 libxml2 riscv64 2.9.14+dfsg-1.3build3 [719 kB] Get:5 http://ftpmaster.internal/ubuntu noble/main riscv64 libmagic-mgc riscv64 1:5.45-2 [307 kB] Get:6 http://ftpmaster.internal/ubuntu noble/main riscv64 libmagic1 riscv64 1:5.45-2 [93.6 kB] Get:7 http://ftpmaster.internal/ubuntu noble/main riscv64 file riscv64 1:5.45-2 [21.7 kB] Get:8 http://ftpmaster.internal/ubuntu noble/main riscv64 gettext-base riscv64 0.21-14 [41.6 kB] Get:9 http://ftpmaster.internal/ubuntu noble/main riscv64 libuchardet0 riscv64 0.0.8-1 [77.4 kB] Get:10 http://ftpmaster.internal/ubuntu noble/main riscv64 groff-base riscv64 1.23.0-3 [1017 kB] Get:11 http://ftpmaster.internal/ubuntu noble/main riscv64 libpipeline1 riscv64 1.5.7-1 [26.8 kB] Get:12 http://ftpmaster.internal/ubuntu noble/main riscv64 man-db riscv64 2.12.0-1 [1214 kB] Get:13 http://ftpmaster.internal/ubuntu noble/main riscv64 m4 riscv64 1.4.19-4 [261 kB] Get:14 http://ftpmaster.internal/ubuntu noble/main riscv64 autoconf all 2.71-3 [339 kB] Get:15 http://ftpmaster.internal/ubuntu noble/main riscv64 autotools-dev all 20220109.1 [44.9 kB] Get:16 http://ftpmaster.internal/ubuntu noble/main riscv64 automake all 1:1.16.5-1.3 [558 kB] Get:17 http://ftpmaster.internal/ubuntu noble/main riscv64 autopoint all 0.21-14 [422 kB] Get:18 http://ftpmaster.internal/ubuntu noble/main riscv64 libdebhelper-perl all 13.11.8ubuntu1 [85.9 kB] Get:19 http://ftpmaster.internal/ubuntu noble/main riscv64 libtool all 2.4.7-7 [166 kB] Get:20 http://ftpmaster.internal/ubuntu noble/main riscv64 dh-autoreconf all 20 [16.1 kB] Get:21 http://ftpmaster.internal/ubuntu noble/main riscv64 libarchive-zip-perl all 1.68-1 [90.2 kB] Get:22 http://ftpmaster.internal/ubuntu noble/main riscv64 libsub-override-perl all 0.10-1 [10.0 kB] Get:23 http://ftpmaster.internal/ubuntu noble/main riscv64 libfile-stripnondeterminism-perl all 1.13.1-1 [18.1 kB] Get:24 http://ftpmaster.internal/ubuntu noble/main riscv64 dh-strip-nondeterminism all 1.13.1-1 [5362 B] Get:25 http://ftpmaster.internal/ubuntu noble/main riscv64 libdw1 riscv64 0.190-1 [268 kB] Get:26 http://ftpmaster.internal/ubuntu noble/main riscv64 debugedit riscv64 1:5.0-5 [48.8 kB] Get:27 http://ftpmaster.internal/ubuntu noble/main riscv64 dwz riscv64 0.15-1 [115 kB] Get:28 http://ftpmaster.internal/ubuntu noble/main riscv64 gettext riscv64 0.21-14 [867 kB] Get:29 http://ftpmaster.internal/ubuntu noble/main riscv64 intltool-debian all 0.35.0+20060710.6 [23.2 kB] Get:30 http://ftpmaster.internal/ubuntu noble/main riscv64 po-debconf all 1.0.21+nmu1 [233 kB] Get:31 http://ftpmaster.internal/ubuntu noble/main riscv64 debhelper all 13.11.8ubuntu1 [940 kB] Get:32 http://ftpmaster.internal/ubuntu noble/main riscv64 libboost1.83-dev riscv64 1.83.0-1ubuntu2 [10.7 MB] Get:33 http://ftpmaster.internal/ubuntu noble-proposed/main riscv64 libboost-dev riscv64 1.83.0.1ubuntu2 [4312 B] Get:34 http://ftpmaster.internal/ubuntu noble/main riscv64 libboost-program-options1.83.0 riscv64 1.83.0-1ubuntu2 [361 kB] Get:35 http://ftpmaster.internal/ubuntu noble/main riscv64 libboost-program-options1.83-dev riscv64 1.83.0-1ubuntu2 [1174 kB] Get:36 http://ftpmaster.internal/ubuntu noble-proposed/main riscv64 libboost-program-options-dev riscv64 1.83.0.1ubuntu2 [4086 B] Get:37 http://ftpmaster.internal/ubuntu noble/universe riscv64 rename all 2.01-2 [18.5 kB] Preconfiguring packages ... Fetched 31.3 MB in 4s (7101 kB/s) Selecting previously unselected package libelf1:riscv64. (Reading database ... 13748 files and directories currently installed.) Preparing to unpack .../00-libelf1_0.190-1_riscv64.deb ... Unpacking libelf1:riscv64 (0.190-1) ... Selecting previously unselected package libicu74:riscv64. Preparing to unpack .../01-libicu74_74.2-1ubuntu1_riscv64.deb ... Unpacking libicu74:riscv64 (74.2-1ubuntu1) ... Selecting previously unselected package libxml2:riscv64. Preparing to unpack .../02-libxml2_2.9.14+dfsg-1.3build3_riscv64.deb ... Unpacking libxml2:riscv64 (2.9.14+dfsg-1.3build3) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../03-libmagic-mgc_1%3a5.45-2_riscv64.deb ... Unpacking libmagic-mgc (1:5.45-2) ... Selecting previously unselected package libmagic1:riscv64. Preparing to unpack .../04-libmagic1_1%3a5.45-2_riscv64.deb ... Unpacking libmagic1:riscv64 (1:5.45-2) ... Selecting previously unselected package file. 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Unpacking libboost-program-options-dev:riscv64 (1.83.0.1ubuntu2) ... Selecting previously unselected package rename. Preparing to unpack .../35-rename_2.01-2_all.deb ... Unpacking rename (2.01-2) ... Selecting previously unselected package sbuild-build-depends-main-dummy. Preparing to unpack .../36-sbuild-build-depends-main-dummy_0.invalid.0_riscv64.deb ... Unpacking sbuild-build-depends-main-dummy (0.invalid.0) ... Setting up libpipeline1:riscv64 (1.5.7-1) ... Setting up libboost-program-options1.83.0:riscv64 (1.83.0-1ubuntu2) ... Setting up libboost1.83-dev:riscv64 (1.83.0-1ubuntu2) ... Setting up libmagic-mgc (1:5.45-2) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.11.8ubuntu1) ... Setting up libboost-program-options1.83-dev:riscv64 (1.83.0-1ubuntu2) ... Setting up libmagic1:riscv64 (1:5.45-2) ... Setting up gettext-base (0.21-14) ... Setting up m4 (1.4.19-4) ... Setting up rename (2.01-2) ... update-alternatives: using /usr/bin/file-rename to provide /usr/bin/rename (rename) in auto mode Setting up file (1:5.45-2) ... Setting up autotools-dev (20220109.1) ... Setting up libboost-program-options-dev:riscv64 (1.83.0.1ubuntu2) ... Setting up autopoint (0.21-14) ... Setting up autoconf (2.71-3) ... Setting up libicu74:riscv64 (74.2-1ubuntu1) ... Setting up libuchardet0:riscv64 (0.0.8-1) ... Setting up libsub-override-perl (0.10-1) ... Setting up libboost-dev:riscv64 (1.83.0.1ubuntu2) ... Setting up libelf1:riscv64 (0.190-1) ... Setting up libxml2:riscv64 (2.9.14+dfsg-1.3build3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up libdw1:riscv64 (0.190-1) ... Setting up gettext (0.21-14) ... Setting up libtool (2.4.7-7) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.23.0-3) ... Setting up debugedit (1:5.0-5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.12.0-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /usr/lib/systemd/system/man-db.timer. Setting up debhelper (13.11.8ubuntu1) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.38-3ubuntu1) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (riscv64 included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.19.0-1021-generic #23~22.04.1-Ubuntu SMP Thu Jun 22 12:49:35 UTC 2023 riscv64 (riscv64) Toolchain package versions: binutils_2.41.50.20231214-1ubuntu1 dpkg-dev_1.22.1ubuntu5 g++-13_13.2.0-9ubuntu1 gcc-13_13.2.0-9ubuntu1 libc6-dev_2.38-3ubuntu1 libstdc++-13-dev_13.2.0-9ubuntu1 libstdc++6_13.2.0-9ubuntu1 linux-libc-dev_6.6.0-14.14 Package versions: adduser_3.137ubuntu1 advancecomp_2.5-1 apt_2.7.7 apt-utils_2.7.7 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-14 autotools-dev_20220109.1 base-files_13ubuntu5 base-passwd_3.6.3 bash_5.2.21-2ubuntu1 bash-completion_1:2.11-8 binutils_2.41.50.20231214-1ubuntu1 binutils-common_2.41.50.20231214-1ubuntu1 binutils-riscv64-linux-gnu_2.41.50.20231214-1ubuntu1 bsdextrautils_2.39.2-6ubuntu1 bsdutils_1:2.39.2-6ubuntu1 build-essential_12.10ubuntu1 bzip2_1.0.8-5build1 ca-certificates_20230311ubuntu1 coreutils_9.4-2ubuntu1 cpp_4:13.2.0-2ubuntu1 cpp-13_13.2.0-9ubuntu1 dash_0.5.12-6ubuntu1 debconf_1.5.82 debconf-i18n_1.5.82 debhelper_13.11.8ubuntu1 debianutils_5.14 debugedit_1:5.0-5 dh-autoreconf_20 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.10-1 dpkg_1.22.1ubuntu5 dpkg-dev_1.22.1ubuntu5 dwz_0.15-1 e2fsprogs_1.47.0-2ubuntu1 fakeroot_1.32.2-1 file_1:5.45-2 findutils_4.9.0-5 g++_4:13.2.0-2ubuntu1 g++-13_13.2.0-9ubuntu1 gcc_4:13.2.0-2ubuntu1 gcc-13_13.2.0-9ubuntu1 gcc-13-base_13.2.0-9ubuntu1 gettext_0.21-14 gettext-base_0.21-14 gpg_2.2.40-1.1ubuntu1 gpg-agent_2.2.40-1.1ubuntu1 gpgconf_2.2.40-1.1ubuntu1 gpgv_2.2.40-1.1ubuntu1 grep_3.11-3 groff-base_1.23.0-3 gzip_1.12-1ubuntu1 hostname_3.23+nmu1ubuntu1 init_1.66ubuntu1 init-system-helpers_1.66ubuntu1 intltool-debian_0.35.0+20060710.6 krb5-locales_1.20.1-5build1 libacl1_2.3.1-3 libapparmor1_4.0.0~alpha2-0ubuntu7 libapt-pkg6.0_2.7.7 libarchive-zip-perl_1.68-1 libargon2-1_0~20190702+dfsg-4 libasan8_13.2.0-9ubuntu1 libassuan0_2.5.6-1 libatomic1_13.2.0-9ubuntu1 libattr1_1:2.5.1-4 libaudit-common_1:3.1.2-1 libaudit1_1:3.1.2-1 libbinutils_2.41.50.20231214-1ubuntu1 libblkid1_2.39.2-6ubuntu1 libboost-dev_1.83.0.1ubuntu2 libboost-program-options-dev_1.83.0.1ubuntu2 libboost-program-options1.83-dev_1.83.0-1ubuntu2 libboost-program-options1.83.0_1.83.0-1ubuntu2 libboost1.83-dev_1.83.0-1ubuntu2 libbz2-1.0_1.0.8-5build1 libc-bin_2.38-3ubuntu1 libc-dev-bin_2.38-3ubuntu1 libc6_2.38-3ubuntu1 libc6-dev_2.38-3ubuntu1 libcap-ng0_0.8.3-3 libcap2_1:2.66-4ubuntu1 libcc1-0_13.2.0-9ubuntu1 libcom-err2_1.47.0-2ubuntu1 libcrypt-dev_1:4.4.36-2 libcrypt1_1:4.4.36-2 libcryptsetup12_2:2.6.1-5ubuntu1 libctf-nobfd0_2.41.50.20231214-1ubuntu1 libctf0_2.41.50.20231214-1ubuntu1 libdb5.3_5.3.28+dfsg2-4 libdebconfclient0_0.271ubuntu1 libdebhelper-perl_13.11.8ubuntu1 libdevmapper1.02.1_2:1.02.185-2ubuntu1 libdpkg-perl_1.22.1ubuntu5 libdw1_0.190-1 libelf1_0.190-1 libext2fs2_1.47.0-2ubuntu1 libfakeroot_1.32.2-1 libfdisk1_2.39.2-6ubuntu1 libffi8_3.4.4-2 libfile-stripnondeterminism-perl_1.13.1-1 libgcc-13-dev_13.2.0-9ubuntu1 libgcc-s1_13.2.0-9ubuntu1 libgcrypt20_1.10.2-3ubuntu1 libgdbm-compat4_1.23-5 libgdbm6_1.23-5 libgmp10_2:6.3.0+dfsg-2ubuntu4 libgnutls30_3.8.1-4ubuntu6 libgomp1_13.2.0-9ubuntu1 libgpg-error-l10n_1.47-3build1 libgpg-error0_1.47-3build1 libgpm2_1.20.7-10build1 libgssapi-krb5-2_1.20.1-5build1 libhogweed6_3.9.1-2 libicu74_74.2-1ubuntu1 libidn2-0_2.3.4-1build1 libip4tc2_1.8.9-2ubuntu2 libisl23_0.26-3 libjansson4_2.14-2 libjson-c5_0.17-1 libk5crypto3_1.20.1-5build1 libkeyutils1_1.6.3-2 libkmod2_30+20230601-2ubuntu1 libkrb5-3_1.20.1-5build1 libkrb5support0_1.20.1-5build1 liblocale-gettext-perl_1.07-6 liblockfile-bin_1.17-1build2 liblockfile1_1.17-1build2 liblz4-1_1.9.4-1 liblzma5_5.4.5-0.1 libmagic-mgc_1:5.45-2 libmagic1_1:5.45-2 libmd0_1.1.0-1 libmount1_2.39.2-6ubuntu1 libmpc3_1.3.1-1 libmpfr6_4.2.1-1 libncursesw6_6.4+20231209-1 libnettle8_3.9.1-2 libnpth0_1.6-3build2 libnsl-dev_1.3.0-3 libnsl2_1.3.0-3 libnss-nis_3.1-0ubuntu6 libnss-nisplus_1.3-0ubuntu6 libp11-kit0_0.25.3-2ubuntu2 libpam-modules_1.5.2-9.1ubuntu1 libpam-modules-bin_1.5.2-9.1ubuntu1 libpam-runtime_1.5.2-9.1ubuntu1 libpam0g_1.5.2-9.1ubuntu1 libpcre2-8-0_10.42-4ubuntu1 libperl5.36_5.36.0-10ubuntu1 libpipeline1_1.5.7-1 libpng16-16_1.6.40-2 libproc2-0_2:4.0.4-2ubuntu1 libreadline8_8.2-3 libseccomp2_2.5.4-2ubuntu1 libselinux1_3.5-1build2 libsemanage-common_3.5-1build1 libsemanage2_3.5-1build1 libsepol2_3.5-2 libsframe1_2.41.50.20231214-1ubuntu1 libsmartcols1_2.39.2-6ubuntu1 libsqlite3-0_3.44.2-1 libss2_1.47.0-2ubuntu1 libssl3_3.0.10-1ubuntu3 libstdc++-13-dev_13.2.0-9ubuntu1 libstdc++6_13.2.0-9ubuntu1 libsub-override-perl_0.10-1 libsystemd-shared_255-1ubuntu1 libsystemd0_255-1ubuntu1 libtasn1-6_4.19.0-3 libtext-charwidth-perl_0.04-11 libtext-iconv-perl_1.7-8 libtext-wrapi18n-perl_0.06-10 libtinfo6_6.4+20231209-1 libtirpc-common_1.3.4+ds-1 libtirpc-dev_1.3.4+ds-1 libtirpc3_1.3.4+ds-1 libtool_2.4.7-7 libuchardet0_0.0.8-1 libudev1_255-1ubuntu1 libunistring2_1.0-2 libunistring5_1.1-2 libuuid1_2.39.2-6ubuntu1 libxml2_2.9.14+dfsg-1.3build3 libxxhash0_0.8.2-2 libzstd1_1.5.5+dfsg2-2 linux-libc-dev_6.6.0-14.14 lockfile-progs_0.1.19build1 login_1:4.13+dfsg1-3ubuntu1 logsave_1.47.0-2ubuntu1 lto-disabled-list_44 m4_1.4.19-4 make_4.3-4.1build1 man-db_2.12.0-1 mawk_1.3.4.20231126-1 mount_2.39.2-6ubuntu1 ncurses-base_6.4+20231209-1 ncurses-bin_6.4+20231209-1 openssl_3.0.10-1ubuntu3 optipng_0.7.7-3 passwd_1:4.13+dfsg1-3ubuntu1 patch_2.7.6-7build2 perl_5.36.0-10ubuntu1 perl-base_5.36.0-10ubuntu1 perl-modules-5.36_5.36.0-10ubuntu1 pinentry-curses_1.2.1-3ubuntu1 pkgbinarymangler_154 po-debconf_1.0.21+nmu1 policyrcd-script-zg2_0.1-3.1 procps_2:4.0.4-2ubuntu1 psmisc_23.6-1 readline-common_8.2-3 rename_2.01-2 rpcsvc-proto_1.4.2-0ubuntu6 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-1 sensible-utils_0.0.20 systemd_255-1ubuntu1 systemd-dev_255-1ubuntu1 systemd-sysv_255-1ubuntu1 sysvinit-utils_3.08-3ubuntu1 tar_1.34+dfsg-1.2ubuntu2 tzdata_2023c-9ubuntu1 ubuntu-keyring_2023.11.28.1 usrmerge_35ubuntu1 util-linux_2.39.2-6ubuntu1 uuid-runtime_2.39.2-6ubuntu1 xz-utils_5.4.5-0.1 zlib1g_1:1.3.dfsg-3ubuntu1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: dnaclust Binary: dnaclust Architecture: any Version: 3-7build3 Maintainer: Ubuntu Developers Uploaders: Andreas Tille Homepage: http://dnaclust.sourceforge.net/ Standards-Version: 4.4.0 Vcs-Browser: https://salsa.debian.org/med-team/dnaclust Vcs-Git: https://salsa.debian.org/med-team/dnaclust.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 12), libboost-dev, libboost-program-options-dev, rename Package-List: dnaclust deb science optional arch=any Checksums-Sha1: 6d61297157dd954b35122b15d43cc78b5d1a749e 23485 dnaclust_3.orig.tar.gz 2c061048206451d448874a56610223df552cc407 36748 dnaclust_3-7build3.debian.tar.xz Checksums-Sha256: f7fccc3b0507229a03f227af7e104bf218e9976c453c3a8ef9c4a3c2db83fc74 23485 dnaclust_3.orig.tar.gz e67bf8254745b9ad5115909ac911c5445bb4a0d8e59f1ae9e5eec3707ccd0e32 36748 dnaclust_3-7build3.debian.tar.xz Files: 68e8c69bc10c75b94aea684222f847a9 23485 dnaclust_3.orig.tar.gz fa713036689e909cd38aca6d0d05fef6 36748 dnaclust_3-7build3.debian.tar.xz Original-Maintainer: Debian Med Packaging Team -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEVovyKmYzfL/Jprm3LIPbyOm9DjcFAmWBsDQACgkQLIPbyOm9 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found dpkg-source: info: extracting dnaclust in /<> dpkg-source: info: unpacking dnaclust_3.orig.tar.gz dpkg-source: info: unpacking dnaclust_3-7build3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix_shel_path.patch dpkg-source: info: applying do_not_staically_linking.patch dpkg-source: info: applying resolve_name_space_conflict_fastasort.patch dpkg-source: info: applying build_with_gcc6.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-27576352 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-27576352 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-27576352 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -mLaunchpad Build Daemon -B -rfakeroot dpkg-buildpackage: info: source package dnaclust dpkg-buildpackage: info: source version 3-7build3 dpkg-buildpackage: info: source distribution noble dpkg-source --before-build . dpkg-buildpackage: info: host architecture riscv64 fakeroot debian/rules clean dh clean dh_auto_clean make -j4 clean make[1]: Entering directory '/<>' rm -f dnaclust.o dnaclust fasta.o fastaselect.o fastaselect fastasort fastasort.o make[1]: Leaving directory '/<>' dh_clean debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a dh_auto_build -a make -j4 "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>' g++ -c -g -O2 -fno-omit-frame-pointer -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/dnaclust-3-7build3 -Wall -pedantic -std=c++98 -O2 dnaclust.cpp g++ -c -g -O2 -fno-omit-frame-pointer -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/dnaclust-3-7build3 -Wall -pedantic -std=c++98 -O2 fasta.cpp g++ -c -g -O2 -fno-omit-frame-pointer -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/dnaclust-3-7build3 -Wall -pedantic -std=c++98 -O2 fastaselect.cpp g++ -c -g -O2 -fno-omit-frame-pointer -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/dnaclust-3-7build3 -Wall -pedantic -std=c++98 -O2 fastasort.cpp -o fastasort.o In file included from /usr/include/boost/any/fwd.hpp:20, from /usr/include/boost/any.hpp:22, from /usr/include/boost/program_options/value_semantic.hpp:12, from /usr/include/boost/program_options/options_description.hpp:13, from /usr/include/boost/program_options.hpp:15, from fastaselect.cpp:8: /usr/include/boost/any/fwd.hpp:34:1: note: ‘#pragma message: C++03 support is deprecated in Boost.Any 1.82 and will be removed in Boost.Any 1.84.’ 34 | BOOST_PRAGMA_MESSAGE("C++03 support is deprecated in Boost.Any 1.82 and will be removed in Boost.Any 1.84.") | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/type_index.hpp:39:1: note: ‘#pragma message: C++03 support is deprecated in Boost.TypeIndex 1.82 and will be removed in Boost.TypeIndex 1.84.’ 39 | BOOST_PRAGMA_MESSAGE("C++03 support is deprecated in Boost.TypeIndex 1.82 and will be removed in Boost.TypeIndex 1.84.") | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/container_hash/detail/requires_cxx11.hpp:18:1: note: ‘#pragma message: C++03 support was deprecated in Boost.ContainerHash 1.82 and will be removed in Boost.ContainerHash 1.84. Please open an issue in https://github.com/boostorg/container_hash if you want it retained.’ 18 | BOOST_PRAGMA_MESSAGE("C++03 support was deprecated in Boost.ContainerHash 1.82 and will be removed in Boost.ContainerHash 1.84. Please open an issue in https://github.com/boostorg/container_hash if you want it retained.") | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/any/fwd.hpp:20, from /usr/include/boost/any.hpp:22, from /usr/include/boost/program_options/value_semantic.hpp:12, from /usr/include/boost/program_options/options_description.hpp:13, from /usr/include/boost/program_options.hpp:15, from fastasort.cpp:8: /usr/include/boost/any/fwd.hpp:34:1: note: ‘#pragma message: C++03 support is deprecated in Boost.Any 1.82 and will be removed in Boost.Any 1.84.’ 34 | BOOST_PRAGMA_MESSAGE("C++03 support is deprecated in Boost.Any 1.82 and will be removed in Boost.Any 1.84.") | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/type_index.hpp:39:1: note: ‘#pragma message: C++03 support is deprecated in Boost.TypeIndex 1.82 and will be removed in Boost.TypeIndex 1.84.’ 39 | BOOST_PRAGMA_MESSAGE("C++03 support is deprecated in Boost.TypeIndex 1.82 and will be removed in Boost.TypeIndex 1.84.") | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/function/detail/requires_cxx11.hpp:18:1: note: ‘#pragma message: C++03 support was deprecated in Boost.Function 1.82 and will be removed in Boost.Function 1.84. Please open an issue in https://github.com/boostorg/function if you want it retained.’ 18 | BOOST_PRAGMA_MESSAGE("C++03 support was deprecated in Boost.Function 1.82 and will be removed in Boost.Function 1.84. Please open an issue in https://github.com/boostorg/function if you want it retained.") | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/container_hash/detail/requires_cxx11.hpp:18:1: note: ‘#pragma message: C++03 support was deprecated in Boost.ContainerHash 1.82 and will be removed in Boost.ContainerHash 1.84. Please open an issue in https://github.com/boostorg/container_hash if you want it retained.’ 18 | BOOST_PRAGMA_MESSAGE("C++03 support was deprecated in Boost.ContainerHash 1.82 and will be removed in Boost.ContainerHash 1.84. Please open an issue in https://github.com/boostorg/container_hash if you want it retained.") | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/any/fwd.hpp:20, from /usr/include/boost/any.hpp:22, from /usr/include/boost/program_options/value_semantic.hpp:12, from /usr/include/boost/program_options/options_description.hpp:13, from /usr/include/boost/program_options.hpp:15, from dnaclust.cpp:14: /usr/include/boost/any/fwd.hpp:34:1: note: ‘#pragma message: C++03 support is deprecated in Boost.Any 1.82 and will be removed in Boost.Any 1.84.’ 34 | BOOST_PRAGMA_MESSAGE("C++03 support is deprecated in Boost.Any 1.82 and will be removed in Boost.Any 1.84.") | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/type_index.hpp:39:1: note: ‘#pragma message: C++03 support is deprecated in Boost.TypeIndex 1.82 and will be removed in Boost.TypeIndex 1.84.’ 39 | BOOST_PRAGMA_MESSAGE("C++03 support is deprecated in Boost.TypeIndex 1.82 and will be removed in Boost.TypeIndex 1.84.") | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/bind/detail/requires_cxx11.hpp:18:1: note: ‘#pragma message: C++03 support was deprecated in Boost.Bind 1.82 and will be removed in Boost.Bind 1.84. Please open an issue in https://github.com/boostorg/bind if you want it retained.’ 18 | BOOST_PRAGMA_MESSAGE("C++03 support was deprecated in Boost.Bind 1.82 and will be removed in Boost.Bind 1.84. Please open an issue in https://github.com/boostorg/bind if you want it retained.") | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/container_hash/detail/requires_cxx11.hpp:18:1: note: ‘#pragma message: C++03 support was deprecated in Boost.ContainerHash 1.82 and will be removed in Boost.ContainerHash 1.84. Please open an issue in https://github.com/boostorg/container_hash if you want it retained.’ 18 | BOOST_PRAGMA_MESSAGE("C++03 support was deprecated in Boost.ContainerHash 1.82 and will be removed in Boost.ContainerHash 1.84. Please open an issue in https://github.com/boostorg/container_hash if you want it retained.") | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/lexical_cast.hpp:40:1: note: ‘#pragma message: C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.’ 40 | BOOST_PRAGMA_MESSAGE("C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.") | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/function/detail/requires_cxx11.hpp:18:1: note: ‘#pragma message: C++03 support was deprecated in Boost.Function 1.82 and will be removed in Boost.Function 1.84. Please open an issue in https://github.com/boostorg/function if you want it retained.’ 18 | BOOST_PRAGMA_MESSAGE("C++03 support was deprecated in Boost.Function 1.82 and will be removed in Boost.Function 1.84. Please open an issue in https://github.com/boostorg/function if you want it retained.") | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/function/detail/requires_cxx11.hpp:18:1: note: ‘#pragma message: C++03 support was deprecated in Boost.Function 1.82 and will be removed in Boost.Function 1.84. Please open an issue in https://github.com/boostorg/function if you want it retained.’ 18 | BOOST_PRAGMA_MESSAGE("C++03 support was deprecated in Boost.Function 1.82 and will be removed in Boost.Function 1.84. Please open an issue in https://github.com/boostorg/function if you want it retained.") | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/bind/detail/requires_cxx11.hpp:18:1: note: ‘#pragma message: C++03 support was deprecated in Boost.Bind 1.82 and will be removed in Boost.Bind 1.84. Please open an issue in https://github.com/boostorg/bind if you want it retained.’ 18 | BOOST_PRAGMA_MESSAGE("C++03 support was deprecated in Boost.Bind 1.82 and will be removed in Boost.Bind 1.84. Please open an issue in https://github.com/boostorg/bind if you want it retained.") | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/bind/detail/requires_cxx11.hpp:18:1: note: ‘#pragma message: C++03 support was deprecated in Boost.Bind 1.82 and will be removed in Boost.Bind 1.84. Please open an issue in https://github.com/boostorg/bind if you want it retained.’ 18 | BOOST_PRAGMA_MESSAGE("C++03 support was deprecated in Boost.Bind 1.82 and will be removed in Boost.Bind 1.84. Please open an issue in https://github.com/boostorg/bind if you want it retained.") | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/lexical_cast.hpp:40:1: note: ‘#pragma message: C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.’ 40 | BOOST_PRAGMA_MESSAGE("C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.") | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/lexical_cast.hpp:40:1: note: ‘#pragma message: C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.’ 40 | BOOST_PRAGMA_MESSAGE("C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.") | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:19:1: note: ‘#pragma message: C++03 support was deprecated in Boost.SmartPtr 1.82 and will be removed in Boost.SmartPtr 1.84. Please open an issue in https://github.com/boostorg/smart_ptr if you want it retained.’ 19 | BOOST_PRAGMA_MESSAGE("C++03 support was deprecated in Boost.SmartPtr 1.82 and will be removed in Boost.SmartPtr 1.84. Please open an issue in https://github.com/boostorg/smart_ptr if you want it retained.") | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:19:1: note: ‘#pragma message: C++03 support was deprecated in Boost.SmartPtr 1.82 and will be removed in Boost.SmartPtr 1.84. Please open an issue in https://github.com/boostorg/smart_ptr if you want it retained.’ 19 | BOOST_PRAGMA_MESSAGE("C++03 support was deprecated in Boost.SmartPtr 1.82 and will be removed in Boost.SmartPtr 1.84. Please open an issue in https://github.com/boostorg/smart_ptr if you want it retained.") | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:19:1: note: ‘#pragma message: C++03 support was deprecated in Boost.SmartPtr 1.82 and will be removed in Boost.SmartPtr 1.84. Please open an issue in https://github.com/boostorg/smart_ptr if you want it retained.’ 19 | BOOST_PRAGMA_MESSAGE("C++03 support was deprecated in Boost.SmartPtr 1.82 and will be removed in Boost.SmartPtr 1.84. Please open an issue in https://github.com/boostorg/smart_ptr if you want it retained.") | ^~~~~~~~~~~~~~~~~~~~ dnaclust.cpp: In function ‘void makeCluster()’: dnaclust.cpp:1337:12: warning: variable ‘num_threads_to_use’ set but not used [-Wunused-but-set-variable] 1337 | size_t num_threads_to_use = num_threads; | ^~~~~~~~~~~~~~~~~~ dnaclust.cpp:1443:11: warning: variable ‘num_threads_to_use’ set but not used [-Wunused-but-set-variable] 1443 | int num_threads_to_use = num_threads; | ^~~~~~~~~~~~~~~~~~ dnaclust.cpp: In function ‘int main(int, char**)’: dnaclust.cpp:1945:11: warning: variable ‘num_threads_to_use’ set but not used [-Wunused-but-set-variable] 1945 | int num_threads_to_use = num_threads; | ^~~~~~~~~~~~~~~~~~ dnaclust.cpp:2135:14: warning: variable ‘num_threads_to_use’ set but not used [-Wunused-but-set-variable] 2135 | size_t num_threads_to_use = num_threads; | ^~~~~~~~~~~~~~~~~~ g++ -g -O2 -fno-omit-frame-pointer -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/dnaclust-3-7build3 -Wall -pedantic -std=c++98 -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now fastasort.o fasta.o -lboost_program_options -o fastasort g++ -g -O2 -fno-omit-frame-pointer -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/dnaclust-3-7build3 -Wall -pedantic -std=c++98 -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now fastaselect.o fasta.o -lboost_program_options -o fastaselect g++ -g -O2 -fno-omit-frame-pointer -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/dnaclust-3-7build3 -Wall -pedantic -std=c++98 -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now dnaclust.o fasta.o -lboost_program_options -o dnaclust -lpthread make[1]: Leaving directory '/<>' dh_auto_test -a create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a dh_auto_install --destdir=debian/dnaclust/ -a debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install prename 's/\.sh//' /<>/debian/dnaclust/usr/bin/* make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a debugedit: debian/dnaclust/usr/bin/dnaclust: Unknown DWARF DW_FORM_0x1f21 53b0289463769ceeac5c08e457e41fcb9c41b3c8 debugedit: debian/dnaclust/usr/lib/dnaclust/fastasort: Unknown DWARF DW_FORM_0x1f21 f5d9fa377deb23ab645f850ab7ce9dc96cda58a4 debugedit: debian/dnaclust/usr/lib/dnaclust/fastaselect: Unknown DWARF DW_FORM_0x1f21 f6bc904bbc85dc765c95294c0598bfc6d88bb877 dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a INFO: pkgstriptranslations version 154 INFO: pkgstriptranslations version 154 pkgstriptranslations: processing dnaclust (in debian/dnaclust); do_strip: , oemstrip: pkgstriptranslations: processing dnaclust-dbgsym (in debian/.debhelper/dnaclust/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgstripfiles: processing control file: debian/dnaclust/DEBIAN/control, package dnaclust, directory debian/dnaclust pkgstripfiles: Running PNG optimization (using 4 cpus) for package dnaclust ... pkgstripfiles: No PNG files. dpkg-deb: building package 'dnaclust' in '../dnaclust_3-7build3_riscv64.deb'. pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgstripfiles: processing control file: debian/.debhelper/dnaclust/dbgsym-root/DEBIAN/control, package dnaclust-dbgsym, directory debian/.debhelper/dnaclust/dbgsym-root dpkg-deb: building package 'dnaclust-dbgsym' in 'debian/.debhelper/scratch-space/build-dnaclust/dnaclust-dbgsym_3-7build3_riscv64.deb'. Renaming dnaclust-dbgsym_3-7build3_riscv64.deb to dnaclust-dbgsym_3-7build3_riscv64.ddeb dpkg-genbuildinfo --build=any -O../dnaclust_3-7build3_riscv64.buildinfo dpkg-genchanges --build=any -mLaunchpad Build Daemon -O../dnaclust_3-7build3_riscv64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2023-12-19T17:05:05Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ dnaclust_3-7build3_riscv64.changes: ----------------------------------- Format: 1.8 Date: Tue, 19 Dec 2023 15:48:50 +0100 Source: dnaclust Binary: dnaclust Built-For-Profiles: noudeb Architecture: riscv64 Version: 3-7build3 Distribution: noble-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Matthias Klose Description: dnaclust - tool for clustering millions of short DNA sequences Changes: dnaclust (3-7build3) noble; urgency=medium . * No-change rebuild for boost defaults change. Checksums-Sha1: d0e72edf9f4940cb63a7b1f1355bf4f3a1b708da 847094 dnaclust-dbgsym_3-7build3_riscv64.ddeb 3a133646fbc9a5e15326cc575e94369e922a3843 5747 dnaclust_3-7build3_riscv64.buildinfo c6c26bd4bc55747abf34eb4aead252d277b75d73 126324 dnaclust_3-7build3_riscv64.deb Checksums-Sha256: 3930b326ed973a3d0ecfe5a1701032a5f696aaa5664fa3da2be7f60bd8d864ab 847094 dnaclust-dbgsym_3-7build3_riscv64.ddeb 659291fe5f55d784992ce7a8ecb6ab8e7e188513ce6ac3a70d1562d3bed13f38 5747 dnaclust_3-7build3_riscv64.buildinfo d7ec9110fabec8e0db3d2f3ce1f75b74b1d9a3ddbc320c6b3999c3875d099ee1 126324 dnaclust_3-7build3_riscv64.deb Files: b4caed8f46dda0d496838c0ec1887637 847094 debug optional dnaclust-dbgsym_3-7build3_riscv64.ddeb f6cdf2e8a988dc31ee79e2a47a6c2996 5747 science optional dnaclust_3-7build3_riscv64.buildinfo e15ecd565692fcecce07f63f86bb293c 126324 science optional dnaclust_3-7build3_riscv64.deb Original-Maintainer: Debian Med Packaging Team /<>/dnaclust_3-7build3_riscv64.changes.new could not be renamed to /<>/dnaclust_3-7build3_riscv64.changes: Illegal seek Distribution field may be wrong!!! +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: dnaclust Binary: dnaclust dnaclust-dbgsym Architecture: riscv64 Version: 3-7build3 Checksums-Md5: b4caed8f46dda0d496838c0ec1887637 847094 dnaclust-dbgsym_3-7build3_riscv64.ddeb e15ecd565692fcecce07f63f86bb293c 126324 dnaclust_3-7build3_riscv64.deb Checksums-Sha1: d0e72edf9f4940cb63a7b1f1355bf4f3a1b708da 847094 dnaclust-dbgsym_3-7build3_riscv64.ddeb c6c26bd4bc55747abf34eb4aead252d277b75d73 126324 dnaclust_3-7build3_riscv64.deb Checksums-Sha256: 3930b326ed973a3d0ecfe5a1701032a5f696aaa5664fa3da2be7f60bd8d864ab 847094 dnaclust-dbgsym_3-7build3_riscv64.ddeb d7ec9110fabec8e0db3d2f3ce1f75b74b1d9a3ddbc320c6b3999c3875d099ee1 126324 dnaclust_3-7build3_riscv64.deb Build-Origin: Ubuntu Build-Architecture: riscv64 Build-Date: Tue, 19 Dec 2023 17:05:01 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs usr-local-has-programs Installed-Build-Depends: autoconf (= 2.71-3), automake (= 1:1.16.5-1.3), autopoint (= 0.21-14), autotools-dev (= 20220109.1), base-files (= 13ubuntu5), base-passwd (= 3.6.3), bash (= 5.2.21-2ubuntu1), binutils (= 2.41.50.20231214-1ubuntu1), binutils-common (= 2.41.50.20231214-1ubuntu1), binutils-riscv64-linux-gnu (= 2.41.50.20231214-1ubuntu1), bsdextrautils (= 2.39.2-6ubuntu1), bsdutils (= 1:2.39.2-6ubuntu1), build-essential (= 12.10ubuntu1), bzip2 (= 1.0.8-5build1), coreutils (= 9.4-2ubuntu1), cpp (= 4:13.2.0-2ubuntu1), cpp-13 (= 13.2.0-9ubuntu1), dash (= 0.5.12-6ubuntu1), debconf (= 1.5.82), debhelper (= 13.11.8ubuntu1), debianutils (= 5.14), debugedit (= 1:5.0-5), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.13.1-1), diffutils (= 1:3.10-1), dpkg (= 1.22.1ubuntu5), dpkg-dev (= 1.22.1ubuntu5), dwz (= 0.15-1), file (= 1:5.45-2), findutils (= 4.9.0-5), 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2.9.14+dfsg-1.3build3), libzstd1 (= 1.5.5+dfsg2-2), linux-libc-dev (= 6.6.0-14.14), login (= 1:4.13+dfsg1-3ubuntu1), lto-disabled-list (= 44), m4 (= 1.4.19-4), make (= 4.3-4.1build1), man-db (= 2.12.0-1), mawk (= 1.3.4.20231126-1), ncurses-base (= 6.4+20231209-1), ncurses-bin (= 6.4+20231209-1), patch (= 2.7.6-7build2), perl (= 5.36.0-10ubuntu1), perl-base (= 5.36.0-10ubuntu1), perl-modules-5.36 (= 5.36.0-10ubuntu1), po-debconf (= 1.0.21+nmu1), rename (= 2.01-2), rpcsvc-proto (= 1.4.2-0ubuntu6), sed (= 4.9-1), sensible-utils (= 0.0.20), sysvinit-utils (= 3.08-3ubuntu1), tar (= 1.34+dfsg-1.2ubuntu2), util-linux (= 2.39.2-6ubuntu1), xz-utils (= 5.4.5-0.1), zlib1g (= 1:1.3.dfsg-3ubuntu1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=4" DEB_BUILD_PROFILES="noudeb" LANG="C.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1702997330" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ dnaclust_3-7build3_riscv64.deb ------------------------------ new Debian package, version 2.0. size 126324 bytes: control archive=1066 bytes. 956 bytes, 19 lines control 755 bytes, 12 lines md5sums Package: dnaclust Version: 3-7build3 Architecture: riscv64 Maintainer: Ubuntu Developers Installed-Size: 640 Depends: libboost-program-options1.83.0 (>= 1.83.0), libc6 (>= 2.34), libgcc-s1 (>= 3.4), libstdc++6 (>= 13.1) Section: science Priority: optional Homepage: http://dnaclust.sourceforge.net/ Description: tool for clustering millions of short DNA sequences dnaclust is a tool for clustering large number of short DNA sequences. The clusters are created in such a way that the "radius" of each clusters is no more than the specified threshold. . The input sequences to be clustered should be in Fasta format. The id of each sequence is based on the first word of the seqeunce in the Fasta format. The first word is the prefix of the header up to the first occurrence of white space characters in the header. Original-Maintainer: Debian Med Packaging Team drwxr-xr-x root/root 0 2023-12-19 14:48 ./ drwxr-xr-x root/root 0 2023-12-19 14:48 ./usr/ drwxr-xr-x root/root 0 2023-12-19 14:48 ./usr/bin/ -rwxr-xr-x root/root 153984 2023-12-19 14:48 ./usr/bin/dnaclust -rwxr-xr-x root/root 2156 2023-12-19 14:48 ./usr/bin/dnaclust-abun -rwxr-xr-x root/root 2976 2023-12-19 14:48 ./usr/bin/dnaclust-ref -rwxr-xr-x root/root 3607 2023-12-19 14:48 ./usr/bin/find-large-clusters -rwxr-xr-x root/root 635 2023-12-19 14:48 ./usr/bin/generate_test_clusters -rwxr-xr-x root/root 1501 2023-12-19 14:48 ./usr/bin/star-align drwxr-xr-x root/root 0 2023-12-19 14:48 ./usr/lib/ drwxr-xr-x root/root 0 2023-12-19 14:48 ./usr/lib/dnaclust/ -rwxr-xr-x root/root 55640 2023-12-19 14:48 ./usr/lib/dnaclust/fastaselect -rwxr-xr-x root/root 30992 2023-12-19 14:48 ./usr/lib/dnaclust/fastasort drwxr-xr-x root/root 0 2023-12-19 14:48 ./usr/share/ drwxr-xr-x root/root 0 2023-12-19 14:48 ./usr/share/doc/ drwxr-xr-x root/root 0 2023-12-19 14:48 ./usr/share/doc/dnaclust/ -rw-r--r-- root/root 531 2023-12-19 14:48 ./usr/share/doc/dnaclust/changelog.Debian.gz -rw-r--r-- root/root 1044 2019-08-08 12:08 ./usr/share/doc/dnaclust/copyright drwxr-xr-x root/root 0 2023-12-19 14:48 ./usr/share/doc/dnaclust/examples/ -rwxr-xr-x root/root 379530 2019-08-08 12:08 ./usr/share/doc/dnaclust/examples/ebola.fasta drwxr-xr-x root/root 0 2023-12-19 14:48 ./usr/share/man/ drwxr-xr-x root/root 0 2023-12-19 14:48 ./usr/share/man/man1/ -rw-r--r-- root/root 3114 2023-12-19 14:48 ./usr/share/man/man1/dnaclust.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: riscv64 Build Type: any Build-Space: 21052 Build-Time: 229 Distribution: noble-proposed Host Architecture: riscv64 Install-Time: 130 Job: dnaclust_3-7build3.dsc Machine Architecture: riscv64 Package: dnaclust Package-Time: 382 Source-Version: 3-7build3 Space: 21052 Status: successful Version: 3-7build3 -------------------------------------------------------------------------------- Finished at 2023-12-19T17:05:05Z Build needed 00:06:22, 21052k disk space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=noble --arch=riscv64 PACKAGEBUILD-27576352 Scanning for processes to kill in build PACKAGEBUILD-27576352