https://launchpad.net/ubuntu/+source/dolfin/2018.1.0.post1-13/+build/16205858 RUN: /usr/share/launchpad-buildd/slavebin/slave-prep Forking launchpad-buildd slave process... Kernel version: Linux lgw01-amd64-054 4.4.0-141-generic #167-Ubuntu SMP Wed Dec 5 10:40:15 UTC 2018 x86_64 Buildd toolchain package versions: launchpad-buildd_165 python-lpbuildd_165 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.4~git201611291343.dcee459~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.6 dpkg-dev_1.18.4ubuntu1.5 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 26 Dec 17:09:51 ntpdate[1813]: adjust time server 10.211.37.1 offset -0.003107 sec RUN: /usr/share/launchpad-buildd/slavebin/in-target unpack-chroot --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-16205858 /home/buildd/filecache-default/020b0022f770b890c357907d03d82568c584d50e Creating target for build PACKAGEBUILD-16205858 RUN: /usr/share/launchpad-buildd/slavebin/in-target mount-chroot --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-16205858 Starting target for build PACKAGEBUILD-16205858 RUN: /usr/share/launchpad-buildd/slavebin/in-target override-sources-list --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-16205858 'deb http://ftpmaster.internal/ubuntu disco main universe' 'deb http://ftpmaster.internal/ubuntu disco-security main universe' 'deb http://ftpmaster.internal/ubuntu disco-updates main universe' 'deb http://ftpmaster.internal/ubuntu disco-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-16205858 RUN: /usr/share/launchpad-buildd/slavebin/in-target update-debian-chroot --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-16205858 Updating target for build PACKAGEBUILD-16205858 Get:1 http://ftpmaster.internal/ubuntu disco InRelease [243 kB] Get:2 http://ftpmaster.internal/ubuntu disco-security InRelease [65.4 kB] Get:3 http://ftpmaster.internal/ubuntu disco-updates InRelease [65.4 kB] Get:4 http://ftpmaster.internal/ubuntu disco-proposed InRelease [93.2 kB] Get:5 http://ftpmaster.internal/ubuntu disco/main amd64 Packages [1006 kB] Get:6 http://ftpmaster.internal/ubuntu disco/main Translation-en [509 kB] Get:7 http://ftpmaster.internal/ubuntu disco/universe amd64 Packages [9008 kB] Get:8 http://ftpmaster.internal/ubuntu disco/universe Translation-en [5172 kB] Get:9 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 Packages [93.6 kB] Get:10 http://ftpmaster.internal/ubuntu disco-proposed/main Translation-en [39.4 kB] Get:11 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 Packages [311 kB] Get:12 http://ftpmaster.internal/ubuntu disco-proposed/universe Translation-en [169 kB] Fetched 16.8 MB in 7s (2284 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: apt binutils binutils-common binutils-x86-64-linux-gnu cpp-8 dash dpkg dpkg-dev e2fslibs e2fsprogs g++-8 gcc-8 gcc-8-base init init-system-helpers libapt-pkg5.0 libasan5 libassuan0 libatomic1 libbinutils libcc1-0 libcom-err2 libcomerr2 libdpkg-perl libext2fs2 libgcc-8-dev libgcc1 libgnutls30 libgomp1 libgpg-error0 libitm1 liblsan0 libmpx2 libquadmath0 libsqlite3-0 libss2 libstdc++-8-dev libstdc++6 libtsan0 libubsan1 linux-libc-dev sed 42 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 38.7 MB of archives. After this operation, 104 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu disco/main amd64 dpkg amd64 1.19.2ubuntu2 [1101 kB] Get:2 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 dash amd64 0.5.10.2-4 [85.8 kB] Get:3 http://ftpmaster.internal/ubuntu disco/main amd64 sed amd64 4.7-1 [190 kB] Get:4 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 init-system-helpers all 1.56+nmu1 [38.2 kB] Get:5 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgnutls30 amd64 3.6.5-2ubuntu1 [759 kB] Get:6 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libubsan1 amd64 8.2.0-13ubuntu1 [121 kB] Get:7 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libtsan0 amd64 8.2.0-13ubuntu1 [288 kB] Get:8 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gcc-8-base amd64 8.2.0-13ubuntu1 [18.6 kB] Get:9 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgcc1 amd64 1:8.2.0-13ubuntu1 [40.8 kB] Get:10 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgomp1 amd64 8.2.0-13ubuntu1 [76.5 kB] Get:11 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libitm1 amd64 8.2.0-13ubuntu1 [28.1 kB] Get:12 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libatomic1 amd64 8.2.0-13ubuntu1 [9056 B] Get:13 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libasan5 amd64 8.2.0-13ubuntu1 [364 kB] Get:14 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 liblsan0 amd64 8.2.0-13ubuntu1 [132 kB] Get:15 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libmpx2 amd64 8.2.0-13ubuntu1 [11.7 kB] Get:16 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libquadmath0 amd64 8.2.0-13ubuntu1 [134 kB] Get:17 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 cpp-8 amd64 8.2.0-13ubuntu1 [7221 kB] Get:18 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libcc1-0 amd64 8.2.0-13ubuntu1 [39.6 kB] Get:19 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 g++-8 amd64 8.2.0-13ubuntu1 [8113 kB] Get:20 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gcc-8 amd64 8.2.0-13ubuntu1 [8004 kB] Get:21 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgcc-8-dev amd64 8.2.0-13ubuntu1 [2304 kB] Get:22 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libstdc++-8-dev amd64 8.2.0-13ubuntu1 [1538 kB] Get:23 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libstdc++6 amd64 8.2.0-13ubuntu1 [398 kB] Get:24 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libbinutils amd64 2.31.1-11ubuntu1 [484 kB] Get:25 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 binutils-common amd64 2.31.1-11ubuntu1 [194 kB] Get:26 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 binutils amd64 2.31.1-11ubuntu1 [3396 B] Get:27 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 binutils-x86-64-linux-gnu amd64 2.31.1-11ubuntu1 [1829 kB] Get:28 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libapt-pkg5.0 amd64 1.8.0~alpha3 [816 kB] Get:29 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 apt amd64 1.8.0~alpha3 [1165 kB] Get:30 http://ftpmaster.internal/ubuntu disco/main amd64 libext2fs2 amd64 1.44.5-1 [159 kB] Get:31 http://ftpmaster.internal/ubuntu disco/main amd64 e2fsprogs amd64 1.44.5-1 [514 kB] Get:32 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 init amd64 1.56+nmu1 [6080 B] Get:33 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgpg-error0 amd64 1.33-3 [57.4 kB] Get:34 http://ftpmaster.internal/ubuntu disco/main amd64 libcom-err2 amd64 1.44.5-1 [9372 B] Get:35 http://ftpmaster.internal/ubuntu disco/main amd64 libss2 amd64 1.44.5-1 [11.1 kB] Get:36 http://ftpmaster.internal/ubuntu disco/main amd64 libsqlite3-0 amd64 3.26.0-3 [530 kB] Get:37 http://ftpmaster.internal/ubuntu disco/main amd64 dpkg-dev all 1.19.2ubuntu2 [549 kB] Get:38 http://ftpmaster.internal/ubuntu disco/main amd64 libdpkg-perl all 1.19.2ubuntu2 [227 kB] Get:39 http://ftpmaster.internal/ubuntu disco/main amd64 e2fslibs amd64 1.44.5-1 [2704 B] Get:40 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libassuan0 amd64 2.5.2-1 [35.1 kB] Get:41 http://ftpmaster.internal/ubuntu disco/main amd64 libcomerr2 amd64 1.44.5-1 [2700 B] Get:42 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 linux-libc-dev amd64 4.19.0-9.10 [1041 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 38.7 MB in 2s (15.7 MB/s) (Reading database ... 12665 files and directories currently installed.) Preparing to unpack .../dpkg_1.19.2ubuntu2_amd64.deb ... Unpacking dpkg (1.19.2ubuntu2) over (1.19.2ubuntu1) ... Setting up dpkg (1.19.2ubuntu2) ... (Reading database ... 12665 files and directories currently installed.) Preparing to unpack .../dash_0.5.10.2-4_amd64.deb ... Unpacking dash (0.5.10.2-4) over (0.5.10.2-2) ... Setting up dash (0.5.10.2-4) ... (Reading database ... 12665 files and directories currently installed.) Preparing to unpack .../archives/sed_4.7-1_amd64.deb ... Unpacking sed (4.7-1) over (4.5-2) ... Setting up sed (4.7-1) ... (Reading database ... 12665 files and directories currently installed.) Preparing to unpack .../init-system-helpers_1.56+nmu1_all.deb ... Unpacking init-system-helpers (1.56+nmu1) over (1.56) ... Setting up init-system-helpers (1.56+nmu1) ... (Reading database ... 12665 files and directories currently installed.) Preparing to unpack .../libgnutls30_3.6.5-2ubuntu1_amd64.deb ... Unpacking libgnutls30:amd64 (3.6.5-2ubuntu1) over (3.6.4-2ubuntu2) ... Setting up libgnutls30:amd64 (3.6.5-2ubuntu1) ... (Reading database ... 12665 files and directories currently installed.) Preparing to unpack .../libubsan1_8.2.0-13ubuntu1_amd64.deb ... Unpacking libubsan1:amd64 (8.2.0-13ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../libtsan0_8.2.0-13ubuntu1_amd64.deb ... Unpacking libtsan0:amd64 (8.2.0-13ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../gcc-8-base_8.2.0-13ubuntu1_amd64.deb ... Unpacking gcc-8-base:amd64 (8.2.0-13ubuntu1) over (8.2.0-12ubuntu1) ... Setting up gcc-8-base:amd64 (8.2.0-13ubuntu1) ... (Reading database ... 12665 files and directories currently installed.) Preparing to unpack .../libgcc1_1%3a8.2.0-13ubuntu1_amd64.deb ... Unpacking libgcc1:amd64 (1:8.2.0-13ubuntu1) over (1:8.2.0-12ubuntu1) ... Setting up libgcc1:amd64 (1:8.2.0-13ubuntu1) ... (Reading database ... 12665 files and directories currently installed.) Preparing to unpack .../00-libgomp1_8.2.0-13ubuntu1_amd64.deb ... Unpacking libgomp1:amd64 (8.2.0-13ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../01-libitm1_8.2.0-13ubuntu1_amd64.deb ... Unpacking libitm1:amd64 (8.2.0-13ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../02-libatomic1_8.2.0-13ubuntu1_amd64.deb ... Unpacking libatomic1:amd64 (8.2.0-13ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../03-libasan5_8.2.0-13ubuntu1_amd64.deb ... Unpacking libasan5:amd64 (8.2.0-13ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../04-liblsan0_8.2.0-13ubuntu1_amd64.deb ... Unpacking liblsan0:amd64 (8.2.0-13ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../05-libmpx2_8.2.0-13ubuntu1_amd64.deb ... Unpacking libmpx2:amd64 (8.2.0-13ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../06-libquadmath0_8.2.0-13ubuntu1_amd64.deb ... Unpacking libquadmath0:amd64 (8.2.0-13ubuntu1) over (8.2.0-12ubuntu1) ... 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(Reading database ... 12665 files and directories currently installed.) Preparing to unpack .../libbinutils_2.31.1-11ubuntu1_amd64.deb ... Unpacking libbinutils:amd64 (2.31.1-11ubuntu1) over (2.31.1-10ubuntu1) ... Preparing to unpack .../binutils-common_2.31.1-11ubuntu1_amd64.deb ... Unpacking binutils-common:amd64 (2.31.1-11ubuntu1) over (2.31.1-10ubuntu1) ... Preparing to unpack .../binutils_2.31.1-11ubuntu1_amd64.deb ... Unpacking binutils (2.31.1-11ubuntu1) over (2.31.1-10ubuntu1) ... Preparing to unpack .../binutils-x86-64-linux-gnu_2.31.1-11ubuntu1_amd64.deb ... Unpacking binutils-x86-64-linux-gnu (2.31.1-11ubuntu1) over (2.31.1-10ubuntu1) ... Preparing to unpack .../libapt-pkg5.0_1.8.0~alpha3_amd64.deb ... Unpacking libapt-pkg5.0:amd64 (1.8.0~alpha3) over (1.8.0~alpha2ubuntu1) ... Setting up libapt-pkg5.0:amd64 (1.8.0~alpha3) ... (Reading database ... 12665 files and directories currently installed.) Preparing to unpack .../apt_1.8.0~alpha3_amd64.deb ... Unpacking apt (1.8.0~alpha3) over (1.8.0~alpha2ubuntu1) ... Setting up apt (1.8.0~alpha3) ... (Reading database ... 12664 files and directories currently installed.) Preparing to unpack .../libext2fs2_1.44.5-1_amd64.deb ... Unpacking libext2fs2:amd64 (1.44.5-1) over (1.44.4-2ubuntu1) ... Setting up libext2fs2:amd64 (1.44.5-1) ... (Reading database ... 12663 files and directories currently installed.) Preparing to unpack .../e2fsprogs_1.44.5-1_amd64.deb ... Unpacking e2fsprogs (1.44.5-1) over (1.44.4-2ubuntu1) ... Preparing to unpack .../init_1.56+nmu1_amd64.deb ... Unpacking init (1.56+nmu1) over (1.56) ... Preparing to unpack .../libgpg-error0_1.33-3_amd64.deb ... Unpacking libgpg-error0:amd64 (1.33-3) over (1.32-3) ... Setting up libgpg-error0:amd64 (1.33-3) ... (Reading database ... 12663 files and directories currently installed.) Preparing to unpack .../0-libcom-err2_1.44.5-1_amd64.deb ... Unpacking libcom-err2:amd64 (1.44.5-1) over (1.44.4-2ubuntu1) ... 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Setting up libquadmath0:amd64 (8.2.0-13ubuntu1) ... Setting up cpp-8 (8.2.0-13ubuntu1) ... Setting up libcom-err2:amd64 (1.44.5-1) ... Setting up libgomp1:amd64 (8.2.0-13ubuntu1) ... Setting up libatomic1:amd64 (8.2.0-13ubuntu1) ... Setting up libss2:amd64 (1.44.5-1) ... Setting up libcc1-0:amd64 (8.2.0-13ubuntu1) ... Setting up e2fslibs:amd64 (1.44.5-1) ... Setting up init (1.56+nmu1) ... Setting up libtsan0:amd64 (8.2.0-13ubuntu1) ... Setting up linux-libc-dev:amd64 (4.19.0-9.10) ... Setting up libdpkg-perl (1.19.2ubuntu2) ... Setting up e2fsprogs (1.44.5-1) ... Setting up liblsan0:amd64 (8.2.0-13ubuntu1) ... Setting up binutils-common:amd64 (2.31.1-11ubuntu1) ... Setting up libmpx2:amd64 (8.2.0-13ubuntu1) ... Processing triggers for libc-bin (2.28-0ubuntu1) ... Setting up libsqlite3-0:amd64 (3.26.0-3) ... Setting up libcomerr2:amd64 (1.44.5-1) ... Setting up libasan5:amd64 (8.2.0-13ubuntu1) ... Setting up libassuan0:amd64 (2.5.2-1) ... Setting up libitm1:amd64 (8.2.0-13ubuntu1) ... Setting up libubsan1:amd64 (8.2.0-13ubuntu1) ... Setting up libbinutils:amd64 (2.31.1-11ubuntu1) ... Setting up libgcc-8-dev:amd64 (8.2.0-13ubuntu1) ... Setting up binutils-x86-64-linux-gnu (2.31.1-11ubuntu1) ... Setting up libstdc++-8-dev:amd64 (8.2.0-13ubuntu1) ... Setting up binutils (2.31.1-11ubuntu1) ... Setting up gcc-8 (8.2.0-13ubuntu1) ... Setting up g++-8 (8.2.0-13ubuntu1) ... Setting up dpkg-dev (1.19.2ubuntu2) ... Processing triggers for libc-bin (2.28-0ubuntu1) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package PACKAGEBUILD-16205858 amd64 disco-proposed -c chroot:build-PACKAGEBUILD-16205858 --arch=amd64 --dist=disco-proposed --nolog -A dolfin_2018.1.0.post1-13.dsc Initiating build PACKAGEBUILD-16205858 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-141-generic #167-Ubuntu SMP Wed Dec 5 10:40:15 UTC 2018 x86_64 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on lgw01-amd64-054.buildd +==============================================================================+ | dolfin 2018.1.0.post1-13 (amd64) 26 Dec 2018 17:10 | +==============================================================================+ Package: dolfin Version: 2018.1.0.post1-13 Source Version: 2018.1.0.post1-13 Distribution: disco-proposed Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 I: NOTICE: Log filtering will replace 'build/dolfin-UmR7kk/dolfin-2018.1.0.post1' with '<>' I: NOTICE: Log filtering will replace 'build/dolfin-UmR7kk' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-16205858/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- dolfin_2018.1.0.post1-13.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-VehNPC/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-VehNPC/apt_archive ./ InRelease Get:2 copy:/<>/resolver-VehNPC/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-VehNPC/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-VehNPC/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-VehNPC/apt_archive ./ Packages [525 B] Fetched 2858 B in 0s (48.1 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-VehNPC/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 12666 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: cmake (>= 3.5), debhelper (>= 11), dh-python, gfortran, chrpath, libboost-chrono-dev, libboost-dev (>= 1.56), libboost-filesystem-dev, libboost-iostreams-dev, libboost-math-dev, libboost-mpi-dev, libboost-program-options-dev, libboost-serialization-dev, libboost-thread-dev, libboost-timer-dev, libeigen3-dev (>= 3.2.90), libhdf5-mpi-dev, libsuitesparse-dev, libscotch-dev, libxml2-dev, mpi-default-dev, petsc-dev (>= 3.7), slepc-dev (>= 3.7), pybind11-dev (>= 2.2.0), python3-setuptools, python3-petsc4py, python3-slepc4py, pkg-config, python3-all-dev, python3-pkg-resources, python3-ffc (>= 2018.1), python3-ffc (<< 2018.2), python3-dijitso (>= 2018.1), python3-dijitso (<< 2018.2), python3-numpy, python3-ply Filtered Build-Depends: cmake (>= 3.5), debhelper (>= 11), dh-python, gfortran, chrpath, libboost-chrono-dev, libboost-dev (>= 1.56), libboost-filesystem-dev, libboost-iostreams-dev, libboost-math-dev, libboost-mpi-dev, libboost-program-options-dev, libboost-serialization-dev, libboost-thread-dev, libboost-timer-dev, libeigen3-dev (>= 3.2.90), libhdf5-mpi-dev, libsuitesparse-dev, libscotch-dev, libxml2-dev, mpi-default-dev, petsc-dev (>= 3.7), slepc-dev (>= 3.7), pybind11-dev (>= 2.2.0), python3-setuptools, python3-petsc4py, python3-slepc4py, pkg-config, python3-all-dev, python3-pkg-resources, python3-ffc (>= 2018.1), python3-ffc (<< 2018.2), python3-dijitso (>= 2018.1), python3-dijitso (<< 2018.2), python3-numpy, python3-ply dpkg-deb: building package 'sbuild-build-depends-dolfin-dummy' in '/<>/resolver-XVstt_/apt_archive/sbuild-build-depends-dolfin-dummy.deb'. Ign:1 copy:/<>/resolver-XVstt_/apt_archive ./ InRelease Get:2 copy:/<>/resolver-XVstt_/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-XVstt_/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-XVstt_/apt_archive ./ Sources [465 B] Get:5 copy:/<>/resolver-XVstt_/apt_archive ./ Packages [789 B] Fetched 3373 B in 0s (99.6 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install dolfin build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils chrpath cmake cmake-data debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file fonts-mathjax gettext gettext-base gfortran gfortran-8 groff-base ibverbs-providers icu-devtools intltool-debian libaec-dev libaec0 libamd2 libarchive-zip-perl libarchive13 libarpack2 libarpack2-dev libasn1-8-heimdal libblas-dev libblas3 libboost-atomic1.67-dev libboost-atomic1.67.0 libboost-chrono-dev libboost-chrono1.67-dev libboost-chrono1.67.0 libboost-date-time1.67-dev libboost-date-time1.67.0 libboost-dev libboost-filesystem-dev libboost-filesystem1.67-dev libboost-filesystem1.67.0 libboost-iostreams-dev libboost-iostreams1.67-dev libboost-iostreams1.67.0 libboost-math-dev libboost-math1.67-dev libboost-math1.67.0 libboost-mpi-dev libboost-mpi1.67-dev libboost-mpi1.67.0 libboost-program-options-dev libboost-program-options1.67-dev libboost-program-options1.67.0 libboost-regex1.67-dev libboost-regex1.67.0 libboost-serialization-dev libboost-serialization1.67-dev libboost-serialization1.67.0 libboost-system1.67-dev libboost-system1.67.0 libboost-thread-dev libboost-thread1.67-dev libboost-thread1.67.0 libboost-timer-dev libboost-timer1.67-dev libboost-timer1.67.0 libboost1.67-dev libbsd0 libbtf1 libcamd2 libccolamd2 libcholmod3 libcolamd2 libcombblas1.16.0 libcroco3 libcurl4 libcxsparse3 libedit2 libeigen3-dev libelf1 libevent-2.1-6 libevent-core-2.1-6 libevent-pthreads-2.1-6 libexpat1 libexpat1-dev libfabric1 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-mpi-dev libfftw3-mpi3 libfftw3-quad3 libfftw3-single3 libfile-stripnondeterminism-perl libgfortran-8-dev libgfortran5 libglib2.0-0 libgraphblas2 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libhdf5-mpi-dev libhdf5-openmpi-103 libhdf5-openmpi-dev libheimbase1-heimdal libheimntlm0-heimdal libhwloc-dev libhwloc-plugins libhwloc5 libhx509-5-heimdal libhypre-2.15.1 libhypre-dev libibverbs-dev libibverbs1 libicu-dev libicu63 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-jquery libjs-jquery-ui libjs-mathjax libjsoncpp1 libk5crypto3 libkeyutils1 libklu1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblapack-dev liblapack3 libldap-2.4-2 libldap-common libldl2 libltdl-dev libltdl7 libmagic-mgc libmagic1 libmetis5 libmongoose2 libmpdec2 libmumps-5.1.2 libmumps-dev libnghttp2-14 libnl-3-200 libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnuma-dev libnuma1 libopenmpi-dev libopenmpi3 libparpack2 libparpack2-dev libpciaccess0 libpetsc-real3.10 libpetsc-real3.10-dev libpetsc3.10-dev-common libpipeline1 libpmix2 libpsl5 libpsm-infinipath1 libpsm2-2 libptscotch-6.0 libptscotch-dev libpython-stdlib libpython2-stdlib libpython2.7-minimal libpython2.7-stdlib libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.7 libpython3.7-dev libpython3.7-minimal libpython3.7-stdlib librbio2 librdmacm1 librhash0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libscalapack-mpi-dev libscalapack-openmpi-dev libscalapack-openmpi2.0 libscotch-6.0 libscotch-dev libsigsegv2 libslepc-real3.10 libslepc-real3.10-dev libspqr2 libssl-dev libsuitesparse-dev libsuitesparseconfig5 libsuperlu-dev libsuperlu-dist-dev libsuperlu-dist6 libsuperlu5 libsz2 libtool libuchardet0 libumfpack5 libuv1 libwind0-heimdal libxml2 libxml2-dev m4 man-db mime-support mpi-default-bin mpi-default-dev ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client petsc-dev pkg-config po-debconf pybind11-dev python python-minimal python2 python2-minimal python2.7 python2.7-minimal python3 python3-all python3-all-dev python3-dev python3-dijitso python3-distutils python3-ffc python3-fiat python3-lib2to3 python3-minimal python3-mpi4py python3-mpmath python3-numpy python3-petsc4py python3-petsc4py-real python3-pkg-resources python3-ply python3-setuptools python3-slepc4py python3-slepc4py-real python3-sympy python3-ufl python3.7 python3.7-dev python3.7-minimal slepc-dev swig swig3.0 zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation cmake-doc ninja-build dh-make gettext-doc libasprintf-dev libgettextpo-dev gfortran-multilib gfortran-doc gfortran-8-multilib gfortran-8-doc libgfortran5-dbg libcoarrays-dev groff lrzip liblapack-doc libboost-doc libboost-graph1.67-dev libboost1.67-doc libboost-container1.67-dev libboost-context1.67-dev libboost-coroutine1.67-dev libboost-exception1.67-dev libboost-fiber1.67-dev libboost-graph-parallel1.67-dev libboost-locale1.67-dev libboost-log1.67-dev libboost-mpi-python1.67-dev libboost-numpy1.67-dev libboost-python1.67-dev libboost-random1.67-dev libboost-signals1.67-dev libboost-stacktrace1.67-dev libboost-test1.67-dev libboost-type-erasure1.67-dev libboost-wave1.67-dev libboost1.67-tools-dev libmpfrc++-dev libntl-dev libeigen3-doc libfftw3-doc krb5-doc krb5-user libhdf5-doc libhwloc-contrib-plugins icu-doc libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix libjs-mathjax-doc libtool-doc openmpi-doc pciutils libpetsc-real3.10-dbg petsc3.10-doc libluminate-dev scalapack-doc libslepc3.10-dev-examples slepc3.10-doc libssl-doc libsuperlu-doc gcj-jdk m4-doc apparmor less www-browser opencl-icd keychain libpam-ssh monkeysphere ssh-askpass libmail-box-perl pybind11-doc python-doc python-tk python2-doc python2.7-doc binfmt-support python3-doc python3-tk python3-venv python-dijitso-doc python3-gmpy2 python3-matplotlib python-mpmath-doc python-numpy-doc python3-nose python3-numpy-dbg python-ply-doc python-setuptools-doc python-slepc4py-docs texlive-fonts-extra dvipng python-sympy-doc python-ufl-doc python3.7-venv python3.7-doc swig-doc swig-examples swig3.0-examples swig3.0-doc Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs javascript-common krb5-locales libcoarrays-openmpi-dev libpetsc3.10-dev-examples ksh | mksh | pdksh | zsh publicsuffix libsasl2-modules xauth libmail-sendmail-perl python-petsc4py-docs python-slepc4py-docs python3-pil ipython3 The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils chrpath cmake cmake-data debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file fonts-mathjax gettext gettext-base gfortran gfortran-8 groff-base ibverbs-providers icu-devtools intltool-debian libaec-dev libaec0 libamd2 libarchive-zip-perl libarchive13 libarpack2 libarpack2-dev libasn1-8-heimdal libblas-dev libblas3 libboost-atomic1.67-dev libboost-atomic1.67.0 libboost-chrono-dev libboost-chrono1.67-dev libboost-chrono1.67.0 libboost-date-time1.67-dev libboost-date-time1.67.0 libboost-dev libboost-filesystem-dev libboost-filesystem1.67-dev libboost-filesystem1.67.0 libboost-iostreams-dev libboost-iostreams1.67-dev libboost-iostreams1.67.0 libboost-math-dev libboost-math1.67-dev libboost-math1.67.0 libboost-mpi-dev libboost-mpi1.67-dev libboost-mpi1.67.0 libboost-program-options-dev libboost-program-options1.67-dev libboost-program-options1.67.0 libboost-regex1.67-dev libboost-regex1.67.0 libboost-serialization-dev libboost-serialization1.67-dev libboost-serialization1.67.0 libboost-system1.67-dev libboost-system1.67.0 libboost-thread-dev libboost-thread1.67-dev libboost-thread1.67.0 libboost-timer-dev libboost-timer1.67-dev libboost-timer1.67.0 libboost1.67-dev libbsd0 libbtf1 libcamd2 libccolamd2 libcholmod3 libcolamd2 libcombblas1.16.0 libcroco3 libcurl4 libcxsparse3 libedit2 libeigen3-dev libelf1 libevent-2.1-6 libevent-core-2.1-6 libevent-pthreads-2.1-6 libexpat1 libexpat1-dev libfabric1 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-mpi-dev libfftw3-mpi3 libfftw3-quad3 libfftw3-single3 libfile-stripnondeterminism-perl libgfortran-8-dev libgfortran5 libglib2.0-0 libgraphblas2 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libhdf5-mpi-dev libhdf5-openmpi-103 libhdf5-openmpi-dev libheimbase1-heimdal libheimntlm0-heimdal libhwloc-dev libhwloc-plugins libhwloc5 libhx509-5-heimdal libhypre-2.15.1 libhypre-dev libibverbs-dev libibverbs1 libicu-dev libicu63 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-jquery libjs-jquery-ui libjs-mathjax libjsoncpp1 libk5crypto3 libkeyutils1 libklu1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblapack-dev liblapack3 libldap-2.4-2 libldap-common libldl2 libltdl-dev libltdl7 libmagic-mgc libmagic1 libmetis5 libmongoose2 libmpdec2 libmumps-5.1.2 libmumps-dev libnghttp2-14 libnl-3-200 libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnuma-dev libnuma1 libopenmpi-dev libopenmpi3 libparpack2 libparpack2-dev libpciaccess0 libpetsc-real3.10 libpetsc-real3.10-dev libpetsc3.10-dev-common libpipeline1 libpmix2 libpsl5 libpsm-infinipath1 libpsm2-2 libptscotch-6.0 libptscotch-dev libpython-stdlib libpython2-stdlib libpython2.7-minimal libpython2.7-stdlib libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.7 libpython3.7-dev libpython3.7-minimal libpython3.7-stdlib librbio2 librdmacm1 librhash0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libscalapack-mpi-dev libscalapack-openmpi-dev libscalapack-openmpi2.0 libscotch-6.0 libscotch-dev libsigsegv2 libslepc-real3.10 libslepc-real3.10-dev libspqr2 libssl-dev libsuitesparse-dev libsuitesparseconfig5 libsuperlu-dev libsuperlu-dist-dev libsuperlu-dist6 libsuperlu5 libsz2 libtool libuchardet0 libumfpack5 libuv1 libwind0-heimdal libxml2 libxml2-dev m4 man-db mime-support mpi-default-bin mpi-default-dev ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client petsc-dev pkg-config po-debconf pybind11-dev python python-minimal python2 python2-minimal python2.7 python2.7-minimal python3 python3-all python3-all-dev python3-dev python3-dijitso python3-distutils python3-ffc python3-fiat python3-lib2to3 python3-minimal python3-mpi4py python3-mpmath python3-numpy python3-petsc4py python3-petsc4py-real python3-pkg-resources python3-ply python3-setuptools python3-slepc4py python3-slepc4py-real python3-sympy python3-ufl python3.7 python3.7-dev python3.7-minimal sbuild-build-depends-dolfin-dummy slepc-dev swig swig3.0 zlib1g-dev 0 upgraded, 262 newly installed, 0 to remove and 0 not upgraded. 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http://ftpmaster.internal/ubuntu disco/main amd64 libarchive13 amd64 3.3.3-2 [305 kB] Get:54 http://ftpmaster.internal/ubuntu disco/main amd64 libroken18-heimdal amd64 7.5.0+dfsg-2.1 [41.4 kB] Get:55 http://ftpmaster.internal/ubuntu disco/main amd64 libasn1-8-heimdal amd64 7.5.0+dfsg-2.1 [182 kB] Get:56 http://ftpmaster.internal/ubuntu disco/main amd64 libheimbase1-heimdal amd64 7.5.0+dfsg-2.1 [29.4 kB] Get:57 http://ftpmaster.internal/ubuntu disco/main amd64 libhcrypto4-heimdal amd64 7.5.0+dfsg-2.1 [86.7 kB] Get:58 http://ftpmaster.internal/ubuntu disco/main amd64 libwind0-heimdal amd64 7.5.0+dfsg-2.1 [47.8 kB] Get:59 http://ftpmaster.internal/ubuntu disco/main amd64 libhx509-5-heimdal amd64 7.5.0+dfsg-2.1 [107 kB] Get:60 http://ftpmaster.internal/ubuntu disco/main amd64 libkrb5-26-heimdal amd64 7.5.0+dfsg-2.1 [206 kB] Get:61 http://ftpmaster.internal/ubuntu disco/main amd64 libheimntlm0-heimdal amd64 7.5.0+dfsg-2.1 [14.8 kB] Get:62 http://ftpmaster.internal/ubuntu disco/main amd64 libgssapi3-heimdal amd64 7.5.0+dfsg-2.1 [96.4 kB] Get:63 http://ftpmaster.internal/ubuntu disco/main amd64 libsasl2-modules-db amd64 2.1.27~101-g0780600+dfsg-3ubuntu2 [14.8 kB] Get:64 http://ftpmaster.internal/ubuntu disco/main amd64 libsasl2-2 amd64 2.1.27~101-g0780600+dfsg-3ubuntu2 [49.2 kB] Get:65 http://ftpmaster.internal/ubuntu disco/main amd64 libldap-common all 2.4.46+dfsg-5ubuntu3 [16.0 kB] Get:66 http://ftpmaster.internal/ubuntu disco/main amd64 libldap-2.4-2 amd64 2.4.46+dfsg-5ubuntu3 [154 kB] Get:67 http://ftpmaster.internal/ubuntu disco/main amd64 libnghttp2-14 amd64 1.35.1-1 [78.9 kB] Get:68 http://ftpmaster.internal/ubuntu disco/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2 [54.5 kB] Get:69 http://ftpmaster.internal/ubuntu disco/main amd64 libcurl4 amd64 7.61.0-1ubuntu2.2 [217 kB] Get:70 http://ftpmaster.internal/ubuntu disco/main amd64 libjsoncpp1 amd64 1.7.4-3 [73.6 kB] Get:71 http://ftpmaster.internal/ubuntu disco/main amd64 librhash0 amd64 1.3.6-3 [78.6 kB] Get:72 http://ftpmaster.internal/ubuntu disco/main amd64 libuv1 amd64 1.24.0-1 [69.3 kB] Get:73 http://ftpmaster.internal/ubuntu disco/main amd64 cmake amd64 3.13.2-1 [3466 kB] Get:74 http://ftpmaster.internal/ubuntu disco/main amd64 libtool all 2.4.6-6 [195 kB] Get:75 http://ftpmaster.internal/ubuntu disco/main amd64 dh-autoreconf all 19 [16.1 kB] Get:76 http://ftpmaster.internal/ubuntu disco/main amd64 libarchive-zip-perl all 1.64-1 [84.9 kB] Get:77 http://ftpmaster.internal/ubuntu disco/main amd64 libfile-stripnondeterminism-perl all 1.0.0-1 [13.9 kB] Get:78 http://ftpmaster.internal/ubuntu disco/main amd64 dh-strip-nondeterminism all 1.0.0-1 [5064 B] Get:79 http://ftpmaster.internal/ubuntu disco/main amd64 dwz amd64 0.12-3 [78.1 kB] Get:80 http://ftpmaster.internal/ubuntu disco/main amd64 libcroco3 amd64 0.6.12-2 [81.3 kB] Get:81 http://ftpmaster.internal/ubuntu disco/main amd64 gettext amd64 0.19.8.1-9 [896 kB] Get:82 http://ftpmaster.internal/ubuntu disco/main amd64 intltool-debian all 0.35.0+20060710.4 [24.9 kB] Get:83 http://ftpmaster.internal/ubuntu disco/main amd64 po-debconf all 1.0.21 [233 kB] Get:84 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 debhelper all 12ubuntu1 [887 kB] Get:85 http://ftpmaster.internal/ubuntu disco/main amd64 python3-lib2to3 all 3.7.1-1ubuntu4 [74.2 kB] Get:86 http://ftpmaster.internal/ubuntu disco/main amd64 python3-distutils all 3.7.1-1ubuntu4 [139 kB] Get:87 http://ftpmaster.internal/ubuntu disco/main amd64 dh-python all 3.20180927ubuntu2 [90.9 kB] Get:88 http://ftpmaster.internal/ubuntu disco/universe amd64 fonts-mathjax all 2.7.4+dfsg-1 [2208 kB] Get:89 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgfortran5 amd64 8.2.0-13ubuntu1 [587 kB] Get:90 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgfortran-8-dev amd64 8.2.0-13ubuntu1 [621 kB] Get:91 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gfortran-8 amd64 8.2.0-13ubuntu1 [7645 kB] Get:92 http://ftpmaster.internal/ubuntu disco/main amd64 gfortran amd64 4:8.2.0-2ubuntu2 [1368 B] Get:93 http://ftpmaster.internal/ubuntu disco/main amd64 libnl-3-200 amd64 3.4.0-1 [53.9 kB] Get:94 http://ftpmaster.internal/ubuntu disco/main amd64 libnl-route-3-200 amd64 3.4.0-1 [149 kB] Get:95 http://ftpmaster.internal/ubuntu disco/main amd64 libibverbs1 amd64 21.0-1 [49.7 kB] Get:96 http://ftpmaster.internal/ubuntu disco/main amd64 ibverbs-providers amd64 21.0-1 [183 kB] Get:97 http://ftpmaster.internal/ubuntu disco/main amd64 icu-devtools amd64 63.1-5 [183 kB] Get:98 http://ftpmaster.internal/ubuntu disco/universe amd64 libaec0 amd64 1.0.2-1 [19.1 kB] Get:99 http://ftpmaster.internal/ubuntu disco/main amd64 libsuitesparseconfig5 amd64 1:5.3.0+dfsg-1 [9288 B] Get:100 http://ftpmaster.internal/ubuntu disco/main amd64 libamd2 amd64 1:5.3.0+dfsg-1 [19.4 kB] Get:101 http://ftpmaster.internal/ubuntu disco/main amd64 libblas3 amd64 3.8.0-2 [138 kB] Get:102 http://ftpmaster.internal/ubuntu disco/main amd64 liblapack3 amd64 3.8.0-2 [2099 kB] Get:103 http://ftpmaster.internal/ubuntu disco/universe amd64 libarpack2 amd64 3.6.3-1 [90.1 kB] Get:104 http://ftpmaster.internal/ubuntu disco/main amd64 libblas-dev amd64 3.8.0-2 [141 kB] Get:105 http://ftpmaster.internal/ubuntu disco/main amd64 liblapack-dev amd64 3.8.0-2 [2127 kB] Get:106 http://ftpmaster.internal/ubuntu disco/universe amd64 libarpack2-dev amd64 3.6.3-1 [97.2 kB] Get:107 http://ftpmaster.internal/ubuntu disco/main amd64 libboost1.67-dev amd64 1.67.0-11 [8362 kB] Get:108 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-atomic1.67.0 amd64 1.67.0-11 [201 kB] Get:109 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-atomic1.67-dev amd64 1.67.0-11 [199 kB] Get:110 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-system1.67.0 amd64 1.67.0-11 [204 kB] Get:111 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-chrono1.67.0 amd64 1.67.0-11 [208 kB] Get:112 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-chrono1.67-dev amd64 1.67.0-11 [210 kB] Get:113 http://ftpmaster.internal/ubuntu disco/universe amd64 libboost-chrono-dev amd64 1.67.0.1 [3652 B] Get:114 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-date-time1.67.0 amd64 1.67.0-11 [214 kB] Get:115 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-serialization1.67.0 amd64 1.67.0-11 [294 kB] Get:116 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-serialization1.67-dev amd64 1.67.0-11 [333 kB] Get:117 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-date-time1.67-dev amd64 1.67.0-11 [221 kB] Get:118 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-dev amd64 1.67.0.1 [3228 B] Get:119 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-filesystem1.67.0 amd64 1.67.0-11 [235 kB] Get:120 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-system1.67-dev amd64 1.67.0-11 [205 kB] Get:121 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-filesystem1.67-dev amd64 1.67.0-11 [242 kB] Get:122 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-filesystem-dev amd64 1.67.0.1 [3064 B] Get:123 http://ftpmaster.internal/ubuntu disco/universe amd64 libboost-regex1.67.0 amd64 1.67.0-11 [457 kB] Get:124 http://ftpmaster.internal/ubuntu disco/main amd64 libicu-dev amd64 63.1-5 [9178 kB] Get:125 http://ftpmaster.internal/ubuntu disco/universe amd64 libboost-regex1.67-dev amd64 1.67.0-11 [511 kB] Get:126 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-iostreams1.67.0 amd64 1.67.0-11 [224 kB] Get:127 http://ftpmaster.internal/ubuntu disco/universe amd64 libboost-iostreams1.67-dev amd64 1.67.0-11 [229 kB] Get:128 http://ftpmaster.internal/ubuntu disco/universe amd64 libboost-iostreams-dev amd64 1.67.0.1 [3012 B] Get:129 http://ftpmaster.internal/ubuntu disco/universe amd64 libboost-math1.67.0 amd64 1.67.0-11 [437 kB] Get:130 http://ftpmaster.internal/ubuntu disco/universe amd64 libboost-math1.67-dev amd64 1.67.0-11 [715 kB] Get:131 http://ftpmaster.internal/ubuntu disco/universe amd64 libboost-math-dev amd64 1.67.0.1 [3224 B] Get:132 http://ftpmaster.internal/ubuntu disco/main amd64 libevent-2.1-6 amd64 2.1.8-stable-4build1 [133 kB] Get:133 http://ftpmaster.internal/ubuntu disco/main amd64 libevent-core-2.1-6 amd64 2.1.8-stable-4build1 [85.9 kB] Get:134 http://ftpmaster.internal/ubuntu disco/main amd64 libevent-pthreads-2.1-6 amd64 2.1.8-stable-4build1 [5228 B] Get:135 http://ftpmaster.internal/ubuntu disco/universe amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6 [168 kB] Get:136 http://ftpmaster.internal/ubuntu disco/universe amd64 libpsm2-2 amd64 11.2.68-4 [177 kB] Get:137 http://ftpmaster.internal/ubuntu disco/main amd64 librdmacm1 amd64 21.0-1 [63.2 kB] Get:138 http://ftpmaster.internal/ubuntu disco/universe amd64 libfabric1 amd64 1.6.1-5 [392 kB] Get:139 http://ftpmaster.internal/ubuntu disco/main amd64 libltdl7 amd64 2.4.6-6 [38.8 kB] Get:140 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 libhwloc5 amd64 1.11.12-1 [107 kB] Get:141 http://ftpmaster.internal/ubuntu disco/main amd64 libpciaccess0 amd64 0.14-1 [17.9 kB] Get:142 http://ftpmaster.internal/ubuntu disco/main amd64 ocl-icd-libopencl1 amd64 2.2.11-1ubuntu1 [30.3 kB] Get:143 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 libhwloc-plugins amd64 1.11.12-1 [12.9 kB] Get:144 http://ftpmaster.internal/ubuntu disco/universe amd64 libpmix2 amd64 3.0.2-2 [406 kB] Get:145 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 libopenmpi3 amd64 3.1.3-6 [2149 kB] Get:146 http://ftpmaster.internal/ubuntu disco/universe amd64 libboost-mpi1.67.0 amd64 1.67.0-11 [246 kB] Get:147 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 openmpi-common all 3.1.3-6 [147 kB] Get:148 http://ftpmaster.internal/ubuntu disco/main amd64 libnl-3-dev amd64 3.4.0-1 [92.2 kB] Get:149 http://ftpmaster.internal/ubuntu disco/main amd64 libnl-route-3-dev amd64 3.4.0-1 [166 kB] Get:150 http://ftpmaster.internal/ubuntu disco/main amd64 libibverbs-dev amd64 21.0-1 [353 kB] Get:151 http://ftpmaster.internal/ubuntu disco/main amd64 libnuma-dev amd64 2.0.12-1 [32.4 kB] Get:152 http://ftpmaster.internal/ubuntu disco/main amd64 libltdl-dev amd64 2.4.6-6 [162 kB] Get:153 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 libhwloc-dev amd64 1.11.12-1 [170 kB] Get:154 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 openmpi-bin amd64 3.1.3-6 [87.9 kB] Get:155 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 libopenmpi-dev amd64 3.1.3-6 [861 kB] Get:156 http://ftpmaster.internal/ubuntu disco/universe amd64 mpi-default-dev amd64 1.13 [3748 B] Get:157 http://ftpmaster.internal/ubuntu disco/universe amd64 libboost-mpi1.67-dev amd64 1.67.0-11 [355 kB] Get:158 http://ftpmaster.internal/ubuntu disco/universe amd64 libboost-mpi-dev amd64 1.67.0.1 [3108 B] Get:159 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-program-options1.67.0 amd64 1.67.0-11 [330 kB] Get:160 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-program-options1.67-dev amd64 1.67.0-11 [357 kB] Get:161 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-program-options-dev amd64 1.67.0.1 [3040 B] Get:162 http://ftpmaster.internal/ubuntu disco/universe amd64 libboost-serialization-dev amd64 1.67.0.1 [3248 B] Get:163 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-thread1.67.0 amd64 1.67.0-11 [241 kB] Get:164 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-thread1.67-dev amd64 1.67.0-11 [243 kB] Get:165 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-thread-dev amd64 1.67.0.1 [3056 B] Get:166 http://ftpmaster.internal/ubuntu disco/universe amd64 libboost-timer1.67.0 amd64 1.67.0-11 [205 kB] Get:167 http://ftpmaster.internal/ubuntu disco/universe amd64 libboost-timer1.67-dev amd64 1.67.0-11 [205 kB] Get:168 http://ftpmaster.internal/ubuntu disco/universe amd64 libboost-timer-dev amd64 1.67.0.1 [3144 B] Get:169 http://ftpmaster.internal/ubuntu disco/main amd64 libbtf1 amd64 1:5.3.0+dfsg-1 [10.8 kB] Get:170 http://ftpmaster.internal/ubuntu disco/main amd64 libcamd2 amd64 1:5.3.0+dfsg-1 [20.9 kB] Get:171 http://ftpmaster.internal/ubuntu disco/main amd64 libccolamd2 amd64 1:5.3.0+dfsg-1 [22.4 kB] Get:172 http://ftpmaster.internal/ubuntu disco/main amd64 libcolamd2 amd64 1:5.3.0+dfsg-1 [16.4 kB] Get:173 http://ftpmaster.internal/ubuntu disco/main amd64 libmetis5 amd64 5.1.0.dfsg-5 [169 kB] Get:174 http://ftpmaster.internal/ubuntu disco/main amd64 libcholmod3 amd64 1:5.3.0+dfsg-1 [308 kB] Get:175 http://ftpmaster.internal/ubuntu disco/universe amd64 libcombblas1.16.0 amd64 1.6.2-3 [272 kB] Get:176 http://ftpmaster.internal/ubuntu disco/main amd64 libcxsparse3 amd64 1:5.3.0+dfsg-1 [62.0 kB] Get:177 http://ftpmaster.internal/ubuntu disco/main amd64 libexpat1-dev amd64 2.2.6-1 [134 kB] Get:178 http://ftpmaster.internal/ubuntu disco/main amd64 libfftw3-double3 amd64 3.3.8-2 [727 kB] Get:179 http://ftpmaster.internal/ubuntu disco/main amd64 libfftw3-long3 amd64 3.3.8-2 [312 kB] Get:180 http://ftpmaster.internal/ubuntu disco/main amd64 libfftw3-quad3 amd64 3.3.8-2 [552 kB] Get:181 http://ftpmaster.internal/ubuntu disco/main amd64 libfftw3-single3 amd64 3.3.8-2 [757 kB] Get:182 http://ftpmaster.internal/ubuntu disco/main amd64 libfftw3-bin amd64 3.3.8-2 [32.2 kB] Get:183 http://ftpmaster.internal/ubuntu disco/main amd64 libfftw3-dev amd64 3.3.8-2 [2087 kB] Get:184 http://ftpmaster.internal/ubuntu disco/universe amd64 libfftw3-mpi3 amd64 3.3.8-2 [45.7 kB] Get:185 http://ftpmaster.internal/ubuntu disco/universe amd64 libfftw3-mpi-dev amd64 3.3.8-2 [47.4 kB] Get:186 http://ftpmaster.internal/ubuntu disco/main amd64 libgraphblas2 amd64 1:5.3.0+dfsg-1 [387 kB] Get:187 http://ftpmaster.internal/ubuntu disco/universe amd64 libsz2 amd64 1.0.2-1 [5152 B] Get:188 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 libhdf5-openmpi-103 amd64 1.10.4+repack-2 [1338 kB] Get:189 http://ftpmaster.internal/ubuntu disco/universe amd64 libsuperlu-dist6 amd64 6.1.0+dfsg1-1 [401 kB] Get:190 http://ftpmaster.internal/ubuntu disco/universe amd64 libsuperlu5 amd64 5.2.1+dfsg1-3build1 [159 kB] Get:191 http://ftpmaster.internal/ubuntu disco/universe amd64 libhypre-2.15.1 amd64 2.15.1-4 [1786 kB] Get:192 http://ftpmaster.internal/ubuntu disco/main amd64 libjpeg-turbo8 amd64 2.0.0-0ubuntu2 [117 kB] Get:193 http://ftpmaster.internal/ubuntu disco/main amd64 libjpeg-turbo8-dev amd64 2.0.0-0ubuntu2 [238 kB] Get:194 http://ftpmaster.internal/ubuntu disco/main amd64 libjpeg8 amd64 8c-2ubuntu8 [2194 B] Get:195 http://ftpmaster.internal/ubuntu disco/main amd64 libjpeg8-dev amd64 8c-2ubuntu8 [1552 B] Get:196 http://ftpmaster.internal/ubuntu disco/main amd64 libjpeg-dev amd64 8c-2ubuntu8 [1546 B] Get:197 http://ftpmaster.internal/ubuntu disco/main amd64 libjs-jquery all 3.2.1-1 [152 kB] Get:198 http://ftpmaster.internal/ubuntu disco/universe amd64 libjs-jquery-ui all 1.12.1+dfsg-5 [232 kB] Get:199 http://ftpmaster.internal/ubuntu disco/main amd64 libklu1 amd64 1:5.3.0+dfsg-1 [70.9 kB] Get:200 http://ftpmaster.internal/ubuntu disco/main amd64 libldl2 amd64 1:5.3.0+dfsg-1 [10.4 kB] Get:201 http://ftpmaster.internal/ubuntu disco/main amd64 libmongoose2 amd64 1:5.3.0+dfsg-1 [30.2 kB] Get:202 http://ftpmaster.internal/ubuntu disco/universe amd64 mpi-default-bin amd64 1.13 [2968 B] Get:203 http://ftpmaster.internal/ubuntu disco/universe amd64 libscalapack-openmpi2.0 amd64 2.0.2-7build2 [1462 kB] Get:204 http://ftpmaster.internal/ubuntu disco/universe amd64 libmumps-5.1.2 amd64 5.1.2-4build2 [1114 kB] Get:205 http://ftpmaster.internal/ubuntu disco/universe amd64 libparpack2 amd64 3.6.3-1 [84.6 kB] Get:206 http://ftpmaster.internal/ubuntu disco/universe amd64 libptscotch-6.0 amd64 6.0.6-2 [653 kB] Get:207 http://ftpmaster.internal/ubuntu disco/main amd64 libumfpack5 amd64 1:5.3.0+dfsg-1 [228 kB] Get:208 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 libpetsc-real3.10 amd64 3.10.3+dfsg1-3 [4943 kB] Get:209 http://ftpmaster.internal/ubuntu disco/universe amd64 libjs-mathjax all 2.7.4+dfsg-1 [5654 kB] Get:210 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 libpetsc3.10-dev-common all 3.10.3+dfsg1-3 [159 kB] Get:211 http://ftpmaster.internal/ubuntu disco/main amd64 librbio2 amd64 1:5.3.0+dfsg-1 [23.9 kB] Get:212 http://ftpmaster.internal/ubuntu disco/main amd64 libspqr2 amd64 1:5.3.0+dfsg-1 [64.0 kB] Get:213 http://ftpmaster.internal/ubuntu disco/main amd64 libsuitesparse-dev amd64 1:5.3.0+dfsg-1 [1272 kB] Get:214 http://ftpmaster.internal/ubuntu disco/universe amd64 libsuperlu-dev amd64 5.2.1+dfsg1-3build1 [16.3 kB] Get:215 http://ftpmaster.internal/ubuntu disco/universe amd64 libhypre-dev amd64 2.15.1-4 [153 kB] Get:216 http://ftpmaster.internal/ubuntu disco/universe amd64 libscotch-6.0 amd64 6.0.6-2 [420 kB] Get:217 http://ftpmaster.internal/ubuntu disco/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-0ubuntu2 [176 kB] Get:218 http://ftpmaster.internal/ubuntu disco/universe amd64 libscotch-dev amd64 6.0.6-2 [3022 kB] Get:219 http://ftpmaster.internal/ubuntu disco/universe amd64 libptscotch-dev amd64 6.0.6-2 [6770 kB] Get:220 http://ftpmaster.internal/ubuntu disco/universe amd64 libscalapack-openmpi-dev amd64 2.0.2-7build2 [6080 B] Get:221 http://ftpmaster.internal/ubuntu disco/universe amd64 libscalapack-mpi-dev amd64 2.0.2-7build2 [2116 B] Get:222 http://ftpmaster.internal/ubuntu disco/universe amd64 libmumps-dev amd64 5.1.2-4build2 [992 kB] Get:223 http://ftpmaster.internal/ubuntu disco/main amd64 libssl-dev amd64 1.1.1a-1ubuntu2 [1569 kB] Get:224 http://ftpmaster.internal/ubuntu disco/universe amd64 libaec-dev amd64 1.0.2-1 [16.9 kB] Get:225 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 libhdf5-openmpi-dev amd64 1.10.4+repack-2 [2486 kB] Get:226 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 libhdf5-mpi-dev amd64 1.10.4+repack-2 [3164 B] Get:227 http://ftpmaster.internal/ubuntu disco/universe amd64 libsuperlu-dist-dev amd64 6.1.0+dfsg1-1 [250 kB] Get:228 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 libpetsc-real3.10-dev amd64 3.10.3+dfsg1-3 [5812 kB] Get:229 http://ftpmaster.internal/ubuntu disco/main amd64 libpython3.7 amd64 3.7.2~rc1-1 [1493 kB] Get:230 http://ftpmaster.internal/ubuntu disco/main amd64 libpython3.7-dev amd64 3.7.2~rc1-1 [48.4 MB] Get:231 http://ftpmaster.internal/ubuntu disco/main amd64 libpython3-dev amd64 3.7.1-1ubuntu1 [7228 B] Get:232 http://ftpmaster.internal/ubuntu disco/main amd64 libpython3-all-dev amd64 3.7.1-1ubuntu1 [1112 B] Get:233 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 libslepc-real3.10 amd64 3.10.1+dfsg1-2 [878 kB] Get:234 http://ftpmaster.internal/ubuntu disco/universe amd64 libparpack2-dev amd64 3.6.3-1 [92.7 kB] Get:235 http://ftpmaster.internal/ubuntu 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[425 kB] Get:245 http://ftpmaster.internal/ubuntu disco/main amd64 python3-pkg-resources all 40.6.2-1 [99.6 kB] Get:246 http://ftpmaster.internal/ubuntu disco/universe amd64 python3-dijitso all 2018.1.0-5 [23.9 kB] Get:247 http://ftpmaster.internal/ubuntu disco/universe amd64 python3-mpmath all 1.1.0-1 [400 kB] Get:248 http://ftpmaster.internal/ubuntu disco/universe amd64 swig3.0 amd64 3.0.12-1.2 [1098 kB] Get:249 http://ftpmaster.internal/ubuntu disco/universe amd64 swig amd64 3.0.12-1.2 [6464 B] Get:250 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 python3-petsc4py-real amd64 3.10.0-2 [838 kB] Get:251 http://ftpmaster.internal/ubuntu disco/main amd64 python3-ply all 3.11-3 [46.5 kB] Get:252 http://ftpmaster.internal/ubuntu disco/main amd64 python3-setuptools all 40.6.2-1 [251 kB] Get:253 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 python3-petsc4py all 3.10.0-2 [3292 B] Get:254 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 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Setting up bsdmainutils (11.1.2ubuntu2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libnl-3-200:amd64 (3.4.0-1) ... Setting up libboost-system1.67.0:amd64 (1.67.0-11) ... Setting up libfftw3-long3:amd64 (3.3.8-2) ... Setting up libmongoose2:amd64 (1:5.3.0+dfsg-1) ... Setting up libgfortran5:amd64 (8.2.0-13ubuntu1) ... Setting up libboost-regex1.67.0:amd64 (1.67.0-11) ... Setting up libpython2.7-stdlib:amd64 (2.7.15-5) ... Setting up autopoint (0.19.8.1-9) ... Setting up libmpdec2:amd64 (2.4.2-2) ... Setting up libsz2:amd64 (1.0.2-1) ... Setting up zlib1g-dev:amd64 (1:1.2.11.dfsg-0ubuntu2) ... Setting up libfile-stripnondeterminism-perl (1.0.0-1) ... Setting up libjpeg8:amd64 (8c-2ubuntu8) ... Setting up libjsoncpp1:amd64 (1.7.4-3) ... Setting up libedit2:amd64 (3.1-20181209-1) ... Setting up libk5crypto3:amd64 (1.16.1-1ubuntu1) ... Setting up libfftw3-bin (3.3.8-2) ... Setting up swig (3.0.12-1.2) ... Setting up libpython3.7-stdlib:amd64 (3.7.2~rc1-1) ... Setting up libpsm2-2 (11.2.68-4) ... Setting up libwind0-heimdal:amd64 (7.5.0+dfsg-2.1) ... Setting up gettext (0.19.8.1-9) ... Setting up libboost-serialization1.67-dev:amd64 (1.67.0-11) ... Setting up libblas-dev:amd64 (3.8.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode Setting up libboost-math1.67-dev:amd64 (1.67.0-11) ... Setting up libarchive13:amd64 (3.3.3-2) ... Setting up libboost-filesystem1.67.0:amd64 (1.67.0-11) ... Setting up libeigen3-dev (3.3.7-1) ... Setting up libasn1-8-heimdal:amd64 (7.5.0+dfsg-2.1) ... Setting up groff-base (1.22.4-1) ... Setting up liblapack3:amd64 (3.8.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libboost-thread1.67.0:amd64 (1.67.0-11) ... Setting up librbio2:amd64 (1:5.3.0+dfsg-1) ... Setting up libcamd2:amd64 (1:5.3.0+dfsg-1) ... Setting up libnl-3-dev:amd64 (3.4.0-1) ... Setting up libhcrypto4-heimdal:amd64 (7.5.0+dfsg-2.1) ... Setting up libaec-dev:amd64 (1.0.2-1) ... Setting up python2.7 (2.7.15-5) ... Setting up libnl-route-3-200:amd64 (3.4.0-1) ... Setting up python3.7 (3.7.2~rc1-1) ... Setting up autoconf (2.69-11) ... Setting up libicu-dev (63.1-5) ... Setting up file (1:5.34-2) ... Setting up libsuperlu5:amd64 (5.2.1+dfsg1-3build1) ... Setting up libhwloc5:amd64 (1.11.12-1) ... Setting up libhx509-5-heimdal:amd64 (7.5.0+dfsg-2.1) ... Setting up libxml2-dev:amd64 (2.9.4+dfsg1-7ubuntu3) ... Setting up libhwloc-plugins:amd64 (1.11.12-1) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up libboost-program-options1.67-dev:amd64 (1.67.0-11) ... Setting up libamd2:amd64 (1:5.3.0+dfsg-1) ... Setting up libboost-atomic1.67-dev:amd64 (1.67.0-11) ... Setting up libjpeg8-dev:amd64 (8c-2ubuntu8) ... Setting up libsuperlu-dev:amd64 (5.2.1+dfsg1-3build1) ... Setting up libjpeg-dev:amd64 (8c-2ubuntu8) ... Setting up libpython3.7:amd64 (3.7.2~rc1-1) ... Setting up libboost-chrono1.67.0:amd64 (1.67.0-11) ... Setting up libfftw3-dev:amd64 (3.3.8-2) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libpython3.7-dev:amd64 (3.7.2~rc1-1) ... Setting up libboost-system1.67-dev:amd64 (1.67.0-11) ... Setting up libarpack2:amd64 (3.6.3-1) ... Setting up man-db (2.8.4-3) ... Not building database; man-db/auto-update is not 'true'. Setting up libpython2-stdlib:amd64 (2.7.15-3) ... Setting up libkrb5-3:amd64 (1.16.1-1ubuntu1) ... Setting up libboost-chrono1.67-dev:amd64 (1.67.0-11) ... Setting up libboost-date-time1.67-dev:amd64 (1.67.0-11) ... Setting up libkrb5-26-heimdal:amd64 (7.5.0+dfsg-2.1) ... Setting up libgfortran-8-dev:amd64 (8.2.0-13ubuntu1) ... Setting up libboost-math-dev:amd64 (1.67.0.1) ... Setting up libheimntlm0-heimdal:amd64 (7.5.0+dfsg-2.1) ... Setting up libboost-program-options-dev:amd64 (1.67.0.1) ... Setting up libpython3-dev:amd64 (3.7.1-1ubuntu1) ... Setting up liblapack-dev:amd64 (3.8.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode Setting up libtool (2.4.6-6) ... Setting up libpython3-stdlib:amd64 (3.7.1-1ubuntu1) ... Setting up libibverbs1:amd64 (21.0-1) ... Setting up libboost-serialization-dev:amd64 (1.67.0.1) ... Setting up libboost-filesystem1.67-dev:amd64 (1.67.0-11) ... Setting up libboost-timer1.67.0:amd64 (1.67.0-11) ... Setting up libboost-timer1.67-dev:amd64 (1.67.0-11) ... Setting up libltdl-dev:amd64 (2.4.6-6) ... Setting up po-debconf (1.0.21) ... Setting up python3 (3.7.1-1ubuntu1) ... Setting up libboost-thread1.67-dev:amd64 (1.67.0-11) ... Setting up libhwloc-dev:amd64 (1.11.12-1) ... Setting up libboost-chrono-dev:amd64 (1.67.0.1) ... Setting up python3-numpy (1:1.14.5-1ubuntu8) ... Setting up gfortran-8 (8.2.0-13ubuntu1) ... Setting up libboost-regex1.67-dev:amd64 (1.67.0-11) ... Setting up libklu1:amd64 (1:5.3.0+dfsg-1) ... Setting up libparpack2:amd64 (3.6.3-1) ... Setting up libnl-route-3-dev:amd64 (3.4.0-1) ... Setting up libboost-timer-dev:amd64 (1.67.0.1) ... Setting up libpmix2:amd64 (3.0.2-2) ... Setting up librdmacm1:amd64 (21.0-1) ... Setting up python3-pkg-resources (40.6.2-1) ... Setting up python3.7-dev (3.7.2~rc1-1) ... Setting up libboost-filesystem-dev:amd64 (1.67.0.1) ... Setting up python3-mpmath (1.1.0-1) ... Setting up python3-ufl (2018.1.0-3) ... Setting up python2 (2.7.15-3) ... Setting up libcholmod3:amd64 (1:5.3.0+dfsg-1) ... Setting up libgssapi-krb5-2:amd64 (1.16.1-1ubuntu1) ... Setting up libpython-stdlib:amd64 (2.7.15-3) ... Setting up libpython3-all-dev:amd64 (3.7.1-1ubuntu1) ... Setting up ibverbs-providers:amd64 (21.0-1) ... Setting up libarpack2-dev:amd64 (3.6.3-1) ... Setting up python3-ply (3.11-3) ... Setting up python3-sympy (1.3-1) ... Setting up libgssapi3-heimdal:amd64 (7.5.0+dfsg-2.1) ... Setting up python3-lib2to3 (3.7.1-1ubuntu4) ... Setting up openssh-client (1:7.9p1-4) ... Setting up libibverbs-dev:amd64 (21.0-1) ... Setting up python3-distutils (3.7.1-1ubuntu4) ... Setting up python (2.7.15-3) ... Setting up libspqr2:amd64 (1:5.3.0+dfsg-1) ... Setting up gfortran (4:8.2.0-2ubuntu2) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up python3-fiat (2018.1.0-4) ... Setting up libboost-thread-dev:amd64 (1.67.0.1) ... Setting up libfabric1 (1.6.1-5) ... Setting up libboost-iostreams1.67-dev:amd64 (1.67.0-11) ... Setting up libumfpack5:amd64 (1:5.3.0+dfsg-1) ... Setting up libldap-2.4-2:amd64 (2.4.46+dfsg-5ubuntu3) ... Setting up libpetsc3.10-dev-common (3.10.3+dfsg1-3) ... Setting up libboost-iostreams-dev:amd64 (1.67.0.1) ... Setting up libsuitesparse-dev:amd64 (1:5.3.0+dfsg-1) ... Setting up python3-setuptools (40.6.2-1) ... Setting up dh-python (3.20180927ubuntu2) ... Setting up libopenmpi3:amd64 (3.1.3-6) ... Setting up libcombblas1.16.0:amd64 (1.6.2-3) ... Setting up libcurl4:amd64 (7.61.0-1ubuntu2.2) ... Setting up libsuperlu-dist6:amd64 (6.1.0+dfsg1-1) ... Setting up libptscotch-6.0 (6.0.6-2) ... Setting up libfftw3-mpi3:amd64 (3.3.8-2) ... Setting up python3-dev (3.7.1-1ubuntu1) ... Setting up openmpi-bin (3.1.3-6) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up python3-all (3.7.1-1ubuntu1) ... Setting up libhypre-2.15.1:amd64 (2.15.1-4) ... Setting up libsuperlu-dist-dev:amd64 (6.1.0+dfsg1-1) ... Setting up python3-mpi4py (2.0.0-3build3) ... Setting up libhdf5-openmpi-103:amd64 (1.10.4+repack-2) ... Setting up cmake (3.13.2-1) ... Setting up libboost-mpi1.67.0 (1.67.0-11) ... Setting up mpi-default-bin (1.13) ... Setting up libfftw3-mpi-dev:amd64 (3.3.8-2) ... Setting up libscalapack-openmpi2.0 (2.0.2-7build2) ... Setting up python3-all-dev (3.7.1-1ubuntu1) ... Setting up libopenmpi-dev:amd64 (3.1.3-6) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode Setting up python3-dijitso (2018.1.0-5) ... Setting up mpi-default-dev (1.13) ... Setting up libscalapack-openmpi-dev (2.0.2-7build2) ... Setting up libhdf5-openmpi-dev (1.10.4+repack-2) ... update-alternatives: using /usr/bin/h5pcc.openmpi to provide /usr/bin/h5pcc (h5pcc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-openmpi.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libscotch-dev (6.0.6-2) ... Setting up libboost-mpi1.67-dev (1.67.0-11) ... Setting up python3-ffc (2018.1.0-4) ... update-alternatives: using /usr/lib/python3/dist-packages/ffc/backends/ufc/ufc.h to provide /usr/include/ufc.h (ufc.h) in auto mode Setting up libparpack2-dev:amd64 (3.6.3-1) ... Setting up libmumps-5.1.2:amd64 (5.1.2-4build2) ... Setting up libptscotch-dev (6.0.6-2) ... Setting up libhypre-dev:amd64 (2.15.1-4) ... Setting up libscalapack-mpi-dev (2.0.2-7build2) ... Setting up libpetsc-real3.10:amd64 (3.10.3+dfsg1-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.10.3 to provide /usr/lib/x86_64-linux-gnu/libpetsc.so.3.10 (libpetsc.so.3.10) in auto mode Setting up libmumps-dev:amd64 (5.1.2-4build2) ... Setting up libhdf5-mpi-dev (1.10.4+repack-2) ... Setting up libboost-mpi-dev (1.67.0.1) ... Setting up libslepc-real3.10 (3.10.1+dfsg1-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/libslepc_real.so.3.10.1 to provide /usr/lib/x86_64-linux-gnu/libslepc.so.3.10 (libslepc.so.3.10) in auto mode Setting up python3-petsc4py-real (3.10.0-2) ... update-alternatives: using /usr/lib/python3/dist-packages/petsc4py_real to provide /usr/lib/python3/dist-packages/petsc4py (petsc4py) in auto mode Setting up libpetsc-real3.10-dev:amd64 (3.10.3+dfsg1-3) ... update-alternatives: error: no alternatives for petsc update-alternatives: using /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real to provide /usr/lib/petsc (petsc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.10.3 to provide /usr/lib/x86_64-linux-gnu/libpetsc_real.so (libpetsc_real.so) in auto mode update-alternatives: using /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real to provide /usr/lib/petscdir/3.10 (petsc3.10) in auto mode Setting up libslepc-real3.10-dev (3.10.1+dfsg1-2) ... update-alternatives: error: no alternatives for slepc update-alternatives: using /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real to provide /usr/lib/slepc (slepc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/libslepc_real.so.3.10.1 to provide /usr/lib/x86_64-linux-gnu/libslepc_real.so (libslepc_real.so) in auto mode update-alternatives: using /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real to provide /usr/lib/slepcdir/3.10 (slepc3.10) in auto mode Setting up petsc-dev (3.10.3+dfsg1-3) ... Setting up python3-petsc4py (3.10.0-2) ... Setting up slepc-dev (3.10.1+dfsg1-2) ... Setting up python3-slepc4py-real (3.10.0-2) ... update-alternatives: using /usr/lib/python3/dist-packages/slepc4py_real to provide /usr/lib/python3/dist-packages/slepc4py (slepc4py) in auto mode Setting up python3-slepc4py (3.10.0-2) ... Setting up debhelper (12ubuntu1) ... Setting up dh-autoreconf (19) ... Setting up dh-strip-nondeterminism (1.0.0-1) ... Setting up sbuild-build-depends-dolfin-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.28-0ubuntu1) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-141-generic amd64 (x86_64) Toolchain package versions: binutils_2.31.1-11ubuntu1 dpkg-dev_1.19.2ubuntu2 g++-8_8.2.0-13ubuntu1 gcc-8_8.2.0-13ubuntu1 libc6-dev_2.28-0ubuntu1 libstdc++-8-dev_8.2.0-13ubuntu1 libstdc++6_8.2.0-13ubuntu1 linux-libc-dev_4.19.0-9.10 Package versions: adduser_3.117ubuntu1 advancecomp_2.1-1 apt_1.8.0~alpha3 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1ubuntu8 base-passwd_3.5.45 bash_4.4.18-2ubuntu3 binutils_2.31.1-11ubuntu1 binutils-common_2.31.1-11ubuntu1 binutils-x86-64-linux-gnu_2.31.1-11ubuntu1 bsdmainutils_11.1.2ubuntu2 bsdutils_1:2.32-0.1ubuntu2 build-essential_12.5ubuntu2 bzip2_1.0.6-9 ca-certificates_20180409 chrpath_0.16-2 cmake_3.13.2-1 cmake-data_3.13.2-1 coreutils_8.28-1ubuntu2 cpp_4:8.2.0-2ubuntu2 cpp-8_8.2.0-13ubuntu1 dash_0.5.10.2-4 debconf_1.5.69 debhelper_12ubuntu1 debianutils_4.8.6 dh-autoreconf_19 dh-python_3.20180927ubuntu2 dh-strip-nondeterminism_1.0.0-1 diffutils_1:3.6-1 dmsetup_2:1.02.145-4.1ubuntu4 dpkg_1.19.2ubuntu2 dpkg-dev_1.19.2ubuntu2 dwz_0.12-3 e2fslibs_1.44.5-1 e2fsprogs_1.44.5-1 fakeroot_1.23-1 fdisk_2.32-0.1ubuntu2 file_1:5.34-2 findutils_4.6.0+git+20181018-1 fonts-mathjax_2.7.4+dfsg-1 g++_4:8.2.0-2ubuntu2 g++-8_8.2.0-13ubuntu1 gcc_4:8.2.0-2ubuntu2 gcc-8_8.2.0-13ubuntu1 gcc-8-base_8.2.0-13ubuntu1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gfortran_4:8.2.0-2ubuntu2 gfortran-8_8.2.0-13ubuntu1 gpg_2.2.8-3ubuntu1 gpg-agent_2.2.8-3ubuntu1 gpgconf_2.2.8-3ubuntu1 gpgv_2.2.8-3ubuntu1 grep_3.1-3 groff-base_1.22.4-1 gzip_1.6-5ubuntu2 hostname_3.21 ibverbs-providers_21.0-1 icu-devtools_63.1-5 init_1.56+nmu1 init-system-helpers_1.56+nmu1 initscripts_2.88dsf-59.3ubuntu2 insserv_1.14.0-5ubuntu3 intltool-debian_0.35.0+20060710.4 libacl1_2.2.52-3build1 libaec-dev_1.0.2-1 libaec0_1.0.2-1 libamd2_1:5.3.0+dfsg-1 libapparmor1_2.12-4ubuntu10 libapt-pkg5.0_1.8.0~alpha3 libarchive-zip-perl_1.64-1 libarchive13_3.3.3-2 libargon2-1_0~20171227-0.1 libarpack2_3.6.3-1 libarpack2-dev_3.6.3-1 libasan5_8.2.0-13ubuntu1 libasn1-8-heimdal_7.5.0+dfsg-2.1 libassuan0_2.5.2-1 libatomic1_8.2.0-13ubuntu1 libattr1_1:2.4.47-2build1 libaudit-common_1:2.8.3-1ubuntu3 libaudit1_1:2.8.3-1ubuntu3 libbinutils_2.31.1-11ubuntu1 libblas-dev_3.8.0-2 libblas3_3.8.0-2 libblkid1_2.32-0.1ubuntu2 libboost-atomic1.67-dev_1.67.0-11 libboost-atomic1.67.0_1.67.0-11 libboost-chrono-dev_1.67.0.1 libboost-chrono1.67-dev_1.67.0-11 libboost-chrono1.67.0_1.67.0-11 libboost-date-time1.67-dev_1.67.0-11 libboost-date-time1.67.0_1.67.0-11 libboost-dev_1.67.0.1 libboost-filesystem-dev_1.67.0.1 libboost-filesystem1.67-dev_1.67.0-11 libboost-filesystem1.67.0_1.67.0-11 libboost-iostreams-dev_1.67.0.1 libboost-iostreams1.67-dev_1.67.0-11 libboost-iostreams1.67.0_1.67.0-11 libboost-math-dev_1.67.0.1 libboost-math1.67-dev_1.67.0-11 libboost-math1.67.0_1.67.0-11 libboost-mpi-dev_1.67.0.1 libboost-mpi1.67-dev_1.67.0-11 libboost-mpi1.67.0_1.67.0-11 libboost-program-options-dev_1.67.0.1 libboost-program-options1.67-dev_1.67.0-11 libboost-program-options1.67.0_1.67.0-11 libboost-regex1.67-dev_1.67.0-11 libboost-regex1.67.0_1.67.0-11 libboost-serialization-dev_1.67.0.1 libboost-serialization1.67-dev_1.67.0-11 libboost-serialization1.67.0_1.67.0-11 libboost-system1.67-dev_1.67.0-11 libboost-system1.67.0_1.67.0-11 libboost-thread-dev_1.67.0.1 libboost-thread1.67-dev_1.67.0-11 libboost-thread1.67.0_1.67.0-11 libboost-timer-dev_1.67.0.1 libboost-timer1.67-dev_1.67.0-11 libboost-timer1.67.0_1.67.0-11 libboost1.67-dev_1.67.0-11 libbsd0_0.9.1-1 libbtf1_1:5.3.0+dfsg-1 libbz2-1.0_1.0.6-9 libc-bin_2.28-0ubuntu1 libc-dev-bin_2.28-0ubuntu1 libc6_2.28-0ubuntu1 libc6-dev_2.28-0ubuntu1 libcamd2_1:5.3.0+dfsg-1 libcap-ng0_0.7.9-1build1 libcap2_1:2.25-1.2 libcc1-0_8.2.0-13ubuntu1 libccolamd2_1:5.3.0+dfsg-1 libcholmod3_1:5.3.0+dfsg-1 libcolamd2_1:5.3.0+dfsg-1 libcom-err2_1.44.5-1 libcombblas1.16.0_1.6.2-3 libcomerr2_1.44.5-1 libcroco3_0.6.12-2 libcryptsetup12_2:2.0.4-2ubuntu2 libcurl4_7.61.0-1ubuntu2.2 libcxsparse3_1:5.3.0+dfsg-1 libdb5.3_5.3.28+dfsg1-0.2 libdebconfclient0_0.244ubuntu1 libdevmapper1.02.1_2:1.02.145-4.1ubuntu4 libdpkg-perl_1.19.2ubuntu2 libedit2_3.1-20181209-1 libeigen3-dev_3.3.7-1 libelf1_0.175-1 libevent-2.1-6_2.1.8-stable-4build1 libevent-core-2.1-6_2.1.8-stable-4build1 libevent-pthreads-2.1-6_2.1.8-stable-4build1 libexpat1_2.2.6-1 libexpat1-dev_2.2.6-1 libext2fs2_1.44.5-1 libfabric1_1.6.1-5 libfakeroot_1.23-1 libfdisk1_2.32-0.1ubuntu2 libffi6_3.2.1-9 libfftw3-bin_3.3.8-2 libfftw3-dev_3.3.8-2 libfftw3-double3_3.3.8-2 libfftw3-long3_3.3.8-2 libfftw3-mpi-dev_3.3.8-2 libfftw3-mpi3_3.3.8-2 libfftw3-quad3_3.3.8-2 libfftw3-single3_3.3.8-2 libfile-stripnondeterminism-perl_1.0.0-1 libgcc-8-dev_8.2.0-13ubuntu1 libgcc1_1:8.2.0-13ubuntu1 libgcrypt20_1.8.4-3ubuntu1 libgdbm-compat4_1.18.1-2 libgdbm6_1.18.1-2 libgfortran-8-dev_8.2.0-13ubuntu1 libgfortran5_8.2.0-13ubuntu1 libglib2.0-0_2.58.1-2 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.5-2ubuntu1 libgomp1_8.2.0-13ubuntu1 libgpg-error0_1.33-3 libgraphblas2_1:5.3.0+dfsg-1 libgssapi-krb5-2_1.16.1-1ubuntu1 libgssapi3-heimdal_7.5.0+dfsg-2.1 libhcrypto4-heimdal_7.5.0+dfsg-2.1 libhdf5-mpi-dev_1.10.4+repack-2 libhdf5-openmpi-103_1.10.4+repack-2 libhdf5-openmpi-dev_1.10.4+repack-2 libheimbase1-heimdal_7.5.0+dfsg-2.1 libheimntlm0-heimdal_7.5.0+dfsg-2.1 libhogweed4_3.4.1~rc1-1 libhwloc-dev_1.11.12-1 libhwloc-plugins_1.11.12-1 libhwloc5_1.11.12-1 libhx509-5-heimdal_7.5.0+dfsg-2.1 libhypre-2.15.1_2.15.1-4 libhypre-dev_2.15.1-4 libibverbs-dev_21.0-1 libibverbs1_21.0-1 libicu-dev_63.1-5 libicu63_63.1-5 libidn11_1.33-2.2ubuntu1 libidn2-0_2.0.5-1 libip4tc0_1.6.1-2ubuntu3 libisl19_0.20-2 libitm1_8.2.0-13ubuntu1 libjpeg-dev_8c-2ubuntu8 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libpython3-dev_3.7.1-1ubuntu1 libpython3-stdlib_3.7.1-1ubuntu1 libpython3.7_3.7.2~rc1-1 libpython3.7-dev_3.7.2~rc1-1 libpython3.7-minimal_3.7.2~rc1-1 libpython3.7-stdlib_3.7.2~rc1-1 libquadmath0_8.2.0-13ubuntu1 librbio2_1:5.3.0+dfsg-1 librdmacm1_21.0-1 libreadline7_7.0-5 librhash0_1.3.6-3 libroken18-heimdal_7.5.0+dfsg-2.1 librtmp1_2.4+20151223.gitfa8646d.1-2 libsasl2-2_2.1.27~101-g0780600+dfsg-3ubuntu2 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3ubuntu2 libscalapack-mpi-dev_2.0.2-7build2 libscalapack-openmpi-dev_2.0.2-7build2 libscalapack-openmpi2.0_2.0.2-7build2 libscotch-6.0_6.0.6-2 libscotch-dev_6.0.6-2 libseccomp2_2.3.3-3ubuntu2 libselinux1_2.8-1build2 libsemanage-common_2.8-1build2 libsemanage1_2.8-1build2 libsepol1_2.8-1 libsigsegv2_2.12-2 libslang2_2.3.2-1ubuntu1 libslepc-real3.10_3.10.1+dfsg1-2 libslepc-real3.10-dev_3.10.1+dfsg1-2 libsmartcols1_2.32-0.1ubuntu2 libspqr2_1:5.3.0+dfsg-1 libsqlite3-0_3.26.0-3 libss2_1.44.5-1 libssl-dev_1.1.1a-1ubuntu2 libssl1.1_1.1.1a-1ubuntu2 libstdc++-8-dev_8.2.0-13ubuntu1 libstdc++6_8.2.0-13ubuntu1 libsuitesparse-dev_1:5.3.0+dfsg-1 libsuitesparseconfig5_1:5.3.0+dfsg-1 libsuperlu-dev_5.2.1+dfsg1-3build1 libsuperlu-dist-dev_6.1.0+dfsg1-1 libsuperlu-dist6_6.1.0+dfsg1-1 libsuperlu5_5.2.1+dfsg1-3build1 libsystemd0_239-7ubuntu15 libsz2_1.0.2-1 libtasn1-6_4.13-3 libtinfo6_6.1+20180210-4ubuntu1 libtool_2.4.6-6 libtsan0_8.2.0-13ubuntu1 libubsan1_8.2.0-13ubuntu1 libuchardet0_0.0.6-3 libudev1_239-7ubuntu15 libumfpack5_1:5.3.0+dfsg-1 libunistring2_0.9.10-1ubuntu1 libusb-0.1-4_2:0.1.12-32 libuuid1_2.32-0.1ubuntu2 libuv1_1.24.0-1 libwind0-heimdal_7.5.0+dfsg-2.1 libxml2_2.9.4+dfsg1-7ubuntu3 libxml2-dev_2.9.4+dfsg1-7ubuntu3 libzstd1_1.3.5+dfsg-1ubuntu1 linux-libc-dev_4.19.0-9.10 lockfile-progs_0.1.18 login_1:4.5-1ubuntu1 lsb-base_9.20170808ubuntu1 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.4-3 mawk_1.3.3-17ubuntu3 mime-support_3.60ubuntu1 mount_2.32-0.1ubuntu2 mpi-default-bin_1.13 mpi-default-dev_1.13 multiarch-support_2.28-0ubuntu1 ncurses-base_6.1+20180210-4ubuntu1 ncurses-bin_6.1+20180210-4ubuntu1 ocl-icd-libopencl1_2.2.11-1ubuntu1 openmpi-bin_3.1.3-6 openmpi-common_3.1.3-6 openssh-client_1:7.9p1-4 openssl_1.1.1a-1ubuntu2 optipng_0.7.6-1.1 passwd_1:4.5-1ubuntu1 patch_2.7.6-3 perl_5.28.1-3 perl-base_5.28.1-3 perl-modules-5.28_5.28.1-3 petsc-dev_3.10.3+dfsg1-3 pinentry-curses_1.1.0-1build2 pkg-config_0.29.1-0ubuntu2 pkgbinarymangler_143 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.15-2ubuntu1 pybind11-dev_2.2.4-1 python_2.7.15-3 python-minimal_2.7.15-3 python2_2.7.15-3 python2-minimal_2.7.15-3 python2.7_2.7.15-5 python2.7-minimal_2.7.15-5 python3_3.7.1-1ubuntu1 python3-all_3.7.1-1ubuntu1 python3-all-dev_3.7.1-1ubuntu1 python3-dev_3.7.1-1ubuntu1 python3-dijitso_2018.1.0-5 python3-distutils_3.7.1-1ubuntu4 python3-ffc_2018.1.0-4 python3-fiat_2018.1.0-4 python3-lib2to3_3.7.1-1ubuntu4 python3-minimal_3.7.1-1ubuntu1 python3-mpi4py_2.0.0-3build3 python3-mpmath_1.1.0-1 python3-numpy_1:1.14.5-1ubuntu8 python3-petsc4py_3.10.0-2 python3-petsc4py-real_3.10.0-2 python3-pkg-resources_40.6.2-1 python3-ply_3.11-3 python3-setuptools_40.6.2-1 python3-slepc4py_3.10.0-2 python3-slepc4py-real_3.10.0-2 python3-sympy_1.3-1 python3-ufl_2018.1.0-3 python3.7_3.7.2~rc1-1 python3.7-dev_3.7.2~rc1-1 python3.7-minimal_3.7.2~rc1-1 readline-common_7.0-5 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-dolfin-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 slepc-dev_3.10.1+dfsg1-2 swig_3.0.12-1.2 swig3.0_3.0.12-1.2 systemd_239-7ubuntu15 systemd-sysv_239-7ubuntu15 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.88dsf-59.10ubuntu2 tar_1.30+dfsg-3 tzdata_2018g-1 ubuntu-keyring_2018.09.18.1 util-linux_2.32-0.1ubuntu2 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-0ubuntu2 zlib1g-dev_1:1.2.11.dfsg-0ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Wed Dec 26 09:41:07 2018 UTC gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./dolfin_2018.1.0.post1-13.dsc dpkg-source: info: extracting dolfin in dolfin-2018.1.0.post1 dpkg-source: info: unpacking dolfin_2018.1.0.post1.orig.tar.gz dpkg-source: info: unpacking dolfin_2018.1.0.post1-13.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying conditional-parmetis-in-cholmod.patch dpkg-source: info: applying test_mpi_oversubscribe.patch dpkg-source: info: applying mpi_prefer_mumps_not_superlu_dist.patch dpkg-source: info: applying skip_demo_hyperelasticity_mpi.patch dpkg-source: info: applying unittests_demos_include_dirs.patch dpkg-source: info: applying extra_CXXFLAGS.patch dpkg-source: info: applying PETSc_3.10_SNESTEST_removed.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-16205858 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-16205858 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-16205858 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package dolfin dpkg-buildpackage: info: source version 2018.1.0.post1-13 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean py3versions: no X-Python3-Version in control file, using supported versions dh clean --buildsystem=cmake --with python3 debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' py3versions: no X-Python3-Version in control file, using supported versions rm -rf installation-build build-tests dh_auto_clean make[1]: Leaving directory '/<>' dh_autoreconf_clean -O--buildsystem=cmake dh_clean -O--buildsystem=cmake debian/rules build py3versions: no X-Python3-Version in control file, using supported versions dh build --buildsystem=cmake --with python3 dh_update_autotools_config -O--buildsystem=cmake dh_autoreconf -O--buildsystem=cmake debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' py3versions: no X-Python3-Version in control file, using supported versions dh_auto_configure -- -D CMAKE_BUILD_TYPE:STRING=RelWithDebInfo -D BUILD_SHARED_LIBS:BOOL=ON -D CMAKE_SKIP_RPATH:BOOL=ON -D CMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF -D PETSC_DIR:PATH=/usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real -D SLEPC_DIR:PATH=/usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real -D DOLFIN_ENABLE_TRILINOS:BOOL=OFF -D DOLFIN_ENABLE_HDF5:BOOL=ON -D HDF5_C_COMPILER_EXECUTABLE:FILEPATH=/usr/bin/h5pcc -D DOLFIN_ENABLE_PARMETIS:BOOL=OFF -D DOLFIN_ENABLE_SCOTCH:BOOL=ON -D DOLFIN_ENABLE_DOCS:BOOL=OFF -D DOLFIN_ENABLE_MPI:BOOL=ON -D MPIEXEC_PARAMS:STRING="--oversubscribe" -D CMAKE_CXX_FLAGS:STRING="-fpermissive" -D DOLFIN_EXTRA_CXX_FLAGS:STRING="-g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security" /<>/ cd obj-x86_64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -D CMAKE_BUILD_TYPE:STRING=RelWithDebInfo -D BUILD_SHARED_LIBS:BOOL=ON -D CMAKE_SKIP_RPATH:BOOL=ON -D CMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF -D PETSC_DIR:PATH=/usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real -D SLEPC_DIR:PATH=/usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real -D DOLFIN_ENABLE_TRILINOS:BOOL=OFF -D DOLFIN_ENABLE_HDF5:BOOL=ON -D HDF5_C_COMPILER_EXECUTABLE:FILEPATH=/usr/bin/h5pcc -D DOLFIN_ENABLE_PARMETIS:BOOL=OFF -D DOLFIN_ENABLE_SCOTCH:BOOL=ON -D DOLFIN_ENABLE_DOCS:BOOL=OFF -D DOLFIN_ENABLE_MPI:BOOL=ON -D MPIEXEC_PARAMS:STRING=--oversubscribe -D CMAKE_CXX_FLAGS:STRING=-fpermissive -D "DOLFIN_EXTRA_CXX_FLAGS:STRING=-g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security" /<>/ .. -- The C compiler identification is GNU 8.2.0 -- The CXX compiler identification is GNU 8.2.0 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Performing Test HAVE_PIPE -- Performing Test HAVE_PIPE - Success -- Performing Test HAVE_PEDANTIC -- Performing Test HAVE_PEDANTIC - Success -- Performing Test HAVE_DEBUG -- Performing Test HAVE_DEBUG - Success -- Performing Test HAVE_O2_OPTIMISATION -- Performing Test HAVE_O2_OPTIMISATION - Success -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so;/usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -- Boost version: 1.67.0 -- Found the following Boost libraries: -- timer -- filesystem -- program_options -- iostreams -- chrono -- system -- regex -- Found Eigen3: /usr/include/eigen3 (Required is at least version "3.2.90") -- Found PythonInterp: /usr/bin/python3 (found suitable version "3.7.2", minimum required is "3") -- Found UFC: /usr/include (Required is at least version "2018.1") -- Found PkgConfig: /usr/bin/pkg-config (found version "0.29.1") -- Checking for one of the modules 'craypetsc_real;PETSc' -- Test PETSC_TEST_RUNS with shared library linking - Success -- Looking for sys/types.h CMake Warning (dev) at /usr/share/cmake-3.13/Modules/CheckIncludeFile.cmake:70 (message): Policy CMP0075 is not set: Include file check macros honor CMAKE_REQUIRED_LIBRARIES. Run "cmake --help-policy CMP0075" for policy details. Use the cmake_policy command to set the policy and suppress this warning. CMAKE_REQUIRED_LIBRARIES is set to: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so For compatibility with CMake 3.11 and below this check is ignoring it. Call Stack (most recent call first): /usr/share/cmake-3.13/Modules/CheckTypeSize.cmake:225 (check_include_file) cmake/modules/FindPETSc.cmake:213 (check_type_size) CMakeLists.txt:301 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of PetscInt -- Check size of PetscInt - done -- Found PETSc: TRUE (found suitable version "3.10.3", minimum required is "3.7") -- Checking for one of the modules 'crayslepc_real;SLEPc' -- Test SLEPC_TEST_RUNS with shared library linking - Success -- Found SLEPc: TRUE (found suitable version "3.10.1", minimum required is "3.7") -- SUNDIALS could not be found/configured. (missing: SUNDIALS_LIBRARIES SUNDIALS_TEST_RUNS SUNDIALS_INCLUDE_DIRS SUNDIALS_VERSION SUNDIALS_VERSION_OK) (Required is at least version "3") -- Checking for package 'SCOTCH-PT' -- Found SCOTCH (version 6.0.4) -- Performing test SCOTCH_TEST_RUNS -- Performing test SCOTCH_TEST_RUNS - Success -- Found SCOTCH: /usr/lib/x86_64-linux-gnu/libptscotch.so;/usr/lib/x86_64-linux-gnu/libscotch.so;/usr/lib/x86_64-linux-gnu/libptscotcherr.so -- Checking for package 'AMD' -- Looking for sgemm_ -- Looking for sgemm_ - found -- Looking for pthread.h -- Looking for pthread.h - found -- Looking for pthread_create -- Looking for pthread_create - not found -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Checking for package 'UMFPACK' -- Checking for package 'AMD' -- Checking for package 'CHOLMOD' -- Checking for package 'AMD' -- Found BLAS: /usr/lib/x86_64-linux-gnu/libblas.so -- Looking for cheev_ -- Looking for cheev_ - found -- Performing test CHOLMOD_TEST_RUNS - Success -- Performing test UMFPACK_TEST_RUNS - Success -- Found UMFPACK: /usr/lib/x86_64-linux-gnu/libumfpack.so;/usr/lib/x86_64-linux-gnu/libamd.so;/usr/lib/x86_64-linux-gnu/libblas.so;/usr/lib/x86_64-linux-gnu/libcholmod.so;/usr/lib/x86_64-linux-gnu/libamd.so;/usr/lib/x86_64-linux-gnu/libcamd.so;/usr/lib/x86_64-linux-gnu/libcolamd.so;/usr/lib/x86_64-linux-gnu/libccolamd.so;/usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/liblapack.so;/usr/lib/x86_64-linux-gnu/libblas.so;/usr/lib/x86_64-linux-gnu/libblas.so;/usr/lib/gcc/x86_64-linux-gnu/8/libgfortran.so;/usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so;/usr/lib/gcc/x86_64-linux-gnu/8/libgfortran.so -- Checking for package 'CHOLMOD' -- Checking for package 'AMD' -- Found BLAS: /usr/lib/x86_64-linux-gnu/libblas.so -- Performing test CHOLMOD_TEST_RUNS - Success -- Found CHOLMOD: /usr/lib/x86_64-linux-gnu/libcholmod.so;/usr/lib/x86_64-linux-gnu/libamd.so;/usr/lib/x86_64-linux-gnu/libcamd.so;/usr/lib/x86_64-linux-gnu/libcolamd.so;/usr/lib/x86_64-linux-gnu/libccolamd.so;/usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/liblapack.so;/usr/lib/x86_64-linux-gnu/libblas.so;/usr/lib/x86_64-linux-gnu/libblas.so;/usr/lib/gcc/x86_64-linux-gnu/8/libgfortran.so -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.4") found components: C -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.2.11") -- The following features have been enabled: * BUILD_SHARED_LIBS, Build DOLFIN with shared libraries. * DOLFIN_AUTO_DETECT_MPI, Detect MPI automatically (turn this off to use the MPI compiler wrappers directly via setting CXX, CXX, FC). * DOLFIN_WITH_LIBRARY_VERSION, Build with library version information. * DOLFIN_ENABLE_MPI, Compile with support for MPI. * DOLFIN_ENABLE_PETSC, Compile with support for PETSc. * DOLFIN_ENABLE_SLEPC, Compile with support for SLEPc. * DOLFIN_ENABLE_UMFPACK, Compile with support for UMFPACK. * DOLFIN_ENABLE_CHOLMOD, Compile with support for CHOLMOD. * DOLFIN_ENABLE_SCOTCH, Compile with support for SCOTCH. * DOLFIN_ENABLE_SUNDIALS, Compile with support for SUNDIALS. * DOLFIN_ENABLE_ZLIB, Compile with support for zlib. * DOLFIN_ENABLE_HDF5, Compile with support for HDF5. -- The following OPTIONAL packages have been found: * MPI, Message Passing Interface (MPI) Enables DOLFIN to run in parallel with MPI * PETSc (required version >= 3.7), Portable, Extensible Toolkit for Scientific Computation, Enables the PETSc linear algebra backend * SLEPc (required version >= 3.7), Scalable Library for Eigenvalue Problem Computations, * SCOTCH, Programs and libraries for graph, mesh and hypergraph partitioning, Enables parallel graph partitioning * UMFPACK, Sparse LU factorization library, * BLAS, Basic Linear Algebra Subprograms, * Threads * CHOLMOD, Sparse Cholesky factorization library for sparse matrices, * HDF5, Hierarchical Data Format 5 (HDF5), * ZLIB, Compression library, -- The following REQUIRED packages have been found: * Boost, Boost C++ libraries, * Eigen3 (required version >= 3.2.90), Lightweight C++ template library for linear algebra, * PythonInterp (required version >= 3), Interactive high-level object-oriented language, * UFC (required version >= 2018.1), Unified language for form-compilers (part of FFC), * PkgConfig -- The following features have been disabled: * CMAKE_USE_RELATIVE_PATHS, Use relative paths in makefiles and projects. * DOLFIN_ENABLE_CODE_COVERAGE, Enable code coverage. * DOLFIN_ENABLE_BENCHMARKS, Enable benchmark programs. * DOLFIN_ENABLE_DOCS, Enable generation of documentation. * DOLFIN_SKIP_BUILD_TESTS, Skip build tests for testing usability of dependency packages. * DOLFIN_DEPRECATION_ERROR, Turn deprecation warnings into errors. * DOLFIN_ENABLE_GEOMETRY_DEBUGGING, Enable geometry debugging. * CMAKE_INSTALL_RPATH_USE_LINK_PATH, Add paths to linker search and installed rpath. * DOLFIN_ENABLE_TRILINOS, Compile with support for Trilinos. * DOLFIN_ENABLE_PARMETIS, Compile with support for ParMETIS. -- The following OPTIONAL packages have not been found: * SUNDIALS (required version >= 3), SUite of Nonlinear and DIfferential/ALgebraic Equation Solvers, Provides robust time integrators and nonlinear solvers that can easily be incorporated into existing simulation codes. -- -- Generating demo source files from reStructuredText -- -------------------------------------------------- extract written to /<>/demo/documented/auto-adaptive-poisson/cpp/AdaptivePoisson.ufl extract written to /<>/demo/documented/auto-adaptive-poisson/cpp/main.cpp extract written to /<>/demo/documented/biharmonic/cpp/Biharmonic.ufl extract written to /<>/demo/documented/biharmonic/cpp/main.cpp extract written to /<>/demo/documented/built-in-meshes/cpp/main.cpp extract written to /<>/demo/documented/eigenvalue/cpp/StiffnessMatrix.ufl extract written to /<>/demo/documented/eigenvalue/cpp/main.cpp extract written to /<>/demo/documented/hyperelasticity/cpp/HyperElasticity.ufl extract written to /<>/demo/documented/hyperelasticity/cpp/main.cpp extract written to /<>/demo/documented/mixed-poisson/cpp/MixedPoisson.ufl extract written to /<>/demo/documented/mixed-poisson/cpp/main.cpp extract written to /<>/demo/documented/nonmatching-interpolation/cpp/P1.ufl extract written to /<>/demo/documented/nonmatching-interpolation/cpp/P3.ufl extract written to /<>/demo/documented/nonmatching-interpolation/cpp/main.cpp extract written to /<>/demo/documented/poisson/cpp/Poisson.ufl extract written to /<>/demo/documented/poisson/cpp/main.cpp -- -- Generating form files in demo, test and bench directories. May take some time... -- ---------------------------------------------------------------------------------------- -- -- Generating CMakeLists.txt files in demo, test and bench directories -- ------------------------------------------------------------------- -- -- Copying demo and test data to build directory. -- ---------------------------------------------- -- Performing Test HAVE_NO_MULTLINE -- Performing Test HAVE_NO_MULTLINE - Success -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY PETSC_DIR SLEPC_DIR -- Build files have been written to: /<>/obj-x86_64-linux-gnu make[1]: Leaving directory '/<>' dh_auto_build -O--buildsystem=cmake cd obj-x86_64-linux-gnu && make -j4 "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>/obj-x86_64-linux-gnu' /usr/bin/cmake -S/<> -B/<>/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/obj-x86_64-linux-gnu/CMakeFiles /<>/obj-x86_64-linux-gnu/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' make -f dolfin/ale/CMakeFiles/compile_ale_forms.dir/build.make dolfin/ale/CMakeFiles/compile_ale_forms.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/dolfin/ale /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/dolfin/ale /<>/obj-x86_64-linux-gnu/dolfin/ale/CMakeFiles/compile_ale_forms.dir/DependInfo.cmake --color= Scanning dependencies of target compile_ale_forms make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f dolfin/ale/CMakeFiles/compile_ale_forms.dir/build.make dolfin/ale/CMakeFiles/compile_ale_forms.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 0%] Compiling form Poisson3D.ufl cd /<>/obj-x86_64-linux-gnu/dolfin/ale && /usr/bin/python3 -m ffc -l dolfin -O -r auto -o /<>/obj-x86_64-linux-gnu /<>/dolfin/ale/Poisson3D.ufl [ 0%] Compiling form Poisson2D.ufl [ 0%] Compiling form Poisson1D.ufl cd /<>/obj-x86_64-linux-gnu/dolfin/ale && /usr/bin/python3 -m ffc -l dolfin -O -r auto -o /<>/obj-x86_64-linux-gnu /<>/dolfin/ale/Poisson1D.ufl cd /<>/obj-x86_64-linux-gnu/dolfin/ale && /usr/bin/python3 -m ffc -l dolfin -O -r auto -o /<>/obj-x86_64-linux-gnu /<>/dolfin/ale/Poisson2D.ufl make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 0%] Built target compile_ale_forms make -f dolfin/CMakeFiles/dolfin.dir/build.make dolfin/CMakeFiles/dolfin.dir/depend make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/dolfin /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/dolfin /<>/obj-x86_64-linux-gnu/dolfin/CMakeFiles/dolfin.dir/DependInfo.cmake --color= Scanning dependencies of target dolfin make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f dolfin/CMakeFiles/dolfin.dir/build.make dolfin/CMakeFiles/dolfin.dir/build make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 0%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/AdaptiveLinearVariationalSolver.cpp.o [ 0%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/adapt.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/adaptivity/adapt.cpp.o -c /<>/dolfin/adaptivity/adapt.cpp [ 0%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/AdaptiveNonlinearVariationalSolver.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/adaptivity/AdaptiveLinearVariationalSolver.cpp.o -c /<>/dolfin/adaptivity/AdaptiveLinearVariationalSolver.cpp cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/adaptivity/AdaptiveNonlinearVariationalSolver.cpp.o -c /<>/dolfin/adaptivity/AdaptiveNonlinearVariationalSolver.cpp [ 1%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/adaptivesolve.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/adaptivity/adaptivesolve.cpp.o -c /<>/dolfin/adaptivity/adaptivesolve.cpp [ 1%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/ErrorControl.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/adaptivity/ErrorControl.cpp.o -c /<>/dolfin/adaptivity/ErrorControl.cpp [ 1%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/Extrapolation.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/adaptivity/Extrapolation.cpp.o -c /<>/dolfin/adaptivity/Extrapolation.cpp [ 3%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/GenericAdaptiveVariationalSolver.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/adaptivity/GenericAdaptiveVariationalSolver.cpp.o -c /<>/dolfin/adaptivity/GenericAdaptiveVariationalSolver.cpp [ 3%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/GoalFunctional.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/adaptivity/GoalFunctional.cpp.o -c /<>/dolfin/adaptivity/GoalFunctional.cpp [ 3%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/marking.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/adaptivity/marking.cpp.o -c /<>/dolfin/adaptivity/marking.cpp [ 3%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/TimeSeries.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/adaptivity/TimeSeries.cpp.o -c /<>/dolfin/adaptivity/TimeSeries.cpp [ 4%] Building CXX object dolfin/CMakeFiles/dolfin.dir/ale/ALE.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/ale/ALE.cpp.o -c /<>/dolfin/ale/ALE.cpp [ 4%] Building CXX object dolfin/CMakeFiles/dolfin.dir/ale/HarmonicSmoothing.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/ale/HarmonicSmoothing.cpp.o -c /<>/dolfin/ale/HarmonicSmoothing.cpp [ 4%] Building CXX object dolfin/CMakeFiles/dolfin.dir/ale/MeshDisplacement.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/ale/MeshDisplacement.cpp.o -c /<>/dolfin/ale/MeshDisplacement.cpp [ 6%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/defines.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -DDOLFIN_GIT_COMMIT_HASH=\"unknown\" -DUFC_SIGNATURE=\"1787c6a9a51ebb964350c957e727f7f916ef486d\" -o CMakeFiles/dolfin.dir/common/defines.cpp.o -c /<>/dolfin/common/defines.cpp [ 6%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/init.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/common/init.cpp.o -c /<>/dolfin/common/init.cpp [ 6%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/MPI.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/common/MPI.cpp.o -c /<>/dolfin/common/MPI.cpp [ 6%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/SubSystemsManager.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/common/SubSystemsManager.cpp.o -c /<>/dolfin/common/SubSystemsManager.cpp [ 7%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/Timer.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/common/Timer.cpp.o -c /<>/dolfin/common/Timer.cpp [ 7%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/timing.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/common/timing.cpp.o -c /<>/dolfin/common/timing.cpp [ 7%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/UniqueIdGenerator.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/common/UniqueIdGenerator.cpp.o -c /<>/dolfin/common/UniqueIdGenerator.cpp [ 9%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/utils.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/common/utils.cpp.o -c /<>/dolfin/common/utils.cpp [ 9%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/Variable.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/common/Variable.cpp.o -c /<>/dolfin/common/Variable.cpp [ 9%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/assemble.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/assemble.cpp.o -c /<>/dolfin/fem/assemble.cpp [ 9%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/assemble_local.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/assemble_local.cpp.o -c /<>/dolfin/fem/assemble_local.cpp [ 10%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/AssemblerBase.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/AssemblerBase.cpp.o -c /<>/dolfin/fem/AssemblerBase.cpp [ 10%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/Assembler.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/Assembler.cpp.o -c /<>/dolfin/fem/Assembler.cpp [ 10%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/DirichletBC.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/DirichletBC.cpp.o -c /<>/dolfin/fem/DirichletBC.cpp [ 12%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/DiscreteOperators.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/DiscreteOperators.cpp.o -c /<>/dolfin/fem/DiscreteOperators.cpp [ 12%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/DofMapBuilder.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/DofMapBuilder.cpp.o -c /<>/dolfin/fem/DofMapBuilder.cpp [ 12%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/DofMap.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/DofMap.cpp.o -c /<>/dolfin/fem/DofMap.cpp [ 14%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/Equation.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/Equation.cpp.o -c /<>/dolfin/fem/Equation.cpp [ 14%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/fem_utils.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/fem_utils.cpp.o -c /<>/dolfin/fem/fem_utils.cpp [ 14%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/FiniteElement.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/FiniteElement.cpp.o -c /<>/dolfin/fem/FiniteElement.cpp [ 14%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/Form.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/Form.cpp.o -c /<>/dolfin/fem/Form.cpp [ 15%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/LinearTimeDependentProblem.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/LinearTimeDependentProblem.cpp.o -c /<>/dolfin/fem/LinearTimeDependentProblem.cpp [ 15%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/LinearVariationalProblem.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/LinearVariationalProblem.cpp.o -c /<>/dolfin/fem/LinearVariationalProblem.cpp [ 15%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/LinearVariationalSolver.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/LinearVariationalSolver.cpp.o -c /<>/dolfin/fem/LinearVariationalSolver.cpp [ 17%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/LocalAssembler.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/LocalAssembler.cpp.o -c /<>/dolfin/fem/LocalAssembler.cpp [ 17%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/LocalSolver.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/LocalSolver.cpp.o -c /<>/dolfin/fem/LocalSolver.cpp [ 17%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/MultiMeshAssembler.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/MultiMeshAssembler.cpp.o -c /<>/dolfin/fem/MultiMeshAssembler.cpp [ 17%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/MultiMeshDirichletBC.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/MultiMeshDirichletBC.cpp.o -c /<>/dolfin/fem/MultiMeshDirichletBC.cpp [ 18%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/MultiMeshDofMap.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/MultiMeshDofMap.cpp.o -c /<>/dolfin/fem/MultiMeshDofMap.cpp [ 18%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/MultiMeshForm.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/MultiMeshForm.cpp.o -c /<>/dolfin/fem/MultiMeshForm.cpp [ 18%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/NonlinearVariationalProblem.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/NonlinearVariationalProblem.cpp.o -c /<>/dolfin/fem/NonlinearVariationalProblem.cpp [ 20%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/NonlinearVariationalSolver.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/NonlinearVariationalSolver.cpp.o -c /<>/dolfin/fem/NonlinearVariationalSolver.cpp [ 20%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/PointSource.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/PointSource.cpp.o -c /<>/dolfin/fem/PointSource.cpp [ 20%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/PETScDMCollection.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/PETScDMCollection.cpp.o -c /<>/dolfin/fem/PETScDMCollection.cpp [ 20%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/solve.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/solve.cpp.o -c /<>/dolfin/fem/solve.cpp [ 21%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/SparsityPatternBuilder.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/SparsityPatternBuilder.cpp.o -c /<>/dolfin/fem/SparsityPatternBuilder.cpp [ 21%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/SystemAssembler.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/SystemAssembler.cpp.o -c /<>/dolfin/fem/SystemAssembler.cpp [ 21%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/UFC.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/fem/UFC.cpp.o -c /<>/dolfin/fem/UFC.cpp [ 23%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/assign.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/assign.cpp.o -c /<>/dolfin/function/assign.cpp [ 23%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/CoefficientAssigner.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/CoefficientAssigner.cpp.o -c /<>/dolfin/function/CoefficientAssigner.cpp [ 23%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/Constant.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/Constant.cpp.o -c /<>/dolfin/function/Constant.cpp [ 23%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/Expression.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/Expression.cpp.o -c /<>/dolfin/function/Expression.cpp [ 25%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/FunctionAssigner.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/FunctionAssigner.cpp.o -c /<>/dolfin/function/FunctionAssigner.cpp [ 25%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/FunctionAXPY.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/FunctionAXPY.cpp.o -c /<>/dolfin/function/FunctionAXPY.cpp [ 25%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/Function.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/Function.cpp.o -c /<>/dolfin/function/Function.cpp [ 26%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/FunctionSpace.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/FunctionSpace.cpp.o -c /<>/dolfin/function/FunctionSpace.cpp [ 26%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/GenericFunction.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/GenericFunction.cpp.o -c /<>/dolfin/function/GenericFunction.cpp [ 26%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/LagrangeInterpolator.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/LagrangeInterpolator.cpp.o -c /<>/dolfin/function/LagrangeInterpolator.cpp [ 26%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/MultiMeshCoefficientAssigner.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/MultiMeshCoefficientAssigner.cpp.o -c /<>/dolfin/function/MultiMeshCoefficientAssigner.cpp [ 28%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/MultiMeshFunction.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/MultiMeshFunction.cpp.o -c /<>/dolfin/function/MultiMeshFunction.cpp [ 28%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/MultiMeshFunctionSpace.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/MultiMeshFunctionSpace.cpp.o -c /<>/dolfin/function/MultiMeshFunctionSpace.cpp [ 28%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/MultiMeshSubSpace.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/MultiMeshSubSpace.cpp.o -c /<>/dolfin/function/MultiMeshSubSpace.cpp [ 29%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/SpecialFacetFunction.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/SpecialFacetFunction.cpp.o -c /<>/dolfin/function/SpecialFacetFunction.cpp [ 29%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/SpecialFunctions.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/function/SpecialFunctions.cpp.o -c /<>/dolfin/function/SpecialFunctions.cpp [ 29%] Building CXX object dolfin/CMakeFiles/dolfin.dir/generation/BoxMesh.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/generation/BoxMesh.cpp.o -c /<>/dolfin/generation/BoxMesh.cpp [ 31%] Building CXX object dolfin/CMakeFiles/dolfin.dir/generation/IntervalMesh.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/generation/IntervalMesh.cpp.o -c /<>/dolfin/generation/IntervalMesh.cpp [ 31%] Building CXX object dolfin/CMakeFiles/dolfin.dir/generation/RectangleMesh.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. 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-Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/generation/SphericalShellMesh.cpp.o -c /<>/dolfin/generation/SphericalShellMesh.cpp [ 31%] Building CXX object dolfin/CMakeFiles/dolfin.dir/generation/UnitDiscMesh.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/generation/UnitDiscMesh.cpp.o -c /<>/dolfin/generation/UnitDiscMesh.cpp [ 32%] Building CXX object dolfin/CMakeFiles/dolfin.dir/generation/UnitTetrahedronMesh.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/generation/UnitTetrahedronMesh.cpp.o -c /<>/dolfin/generation/UnitTetrahedronMesh.cpp [ 32%] Building CXX object dolfin/CMakeFiles/dolfin.dir/generation/UnitTriangleMesh.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/generation/UnitTriangleMesh.cpp.o -c /<>/dolfin/generation/UnitTriangleMesh.cpp [ 32%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/BoundingBoxTree.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/geometry/BoundingBoxTree.cpp.o -c /<>/dolfin/geometry/BoundingBoxTree.cpp [ 34%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/CollisionPredicates.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/geometry/CollisionPredicates.cpp.o -c /<>/dolfin/geometry/CollisionPredicates.cpp [ 34%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/ConvexTriangulation.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/geometry/ConvexTriangulation.cpp.o -c /<>/dolfin/geometry/ConvexTriangulation.cpp [ 34%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/GenericBoundingBoxTree.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/geometry/GenericBoundingBoxTree.cpp.o -c /<>/dolfin/geometry/GenericBoundingBoxTree.cpp [ 34%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/GeometryDebugging.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/geometry/GeometryDebugging.cpp.o -c /<>/dolfin/geometry/GeometryDebugging.cpp [ 35%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/GeometryPredicates.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/geometry/GeometryPredicates.cpp.o -c /<>/dolfin/geometry/GeometryPredicates.cpp [ 35%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/intersect.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/geometry/intersect.cpp.o -c /<>/dolfin/geometry/intersect.cpp [ 35%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/IntersectionConstruction.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/geometry/IntersectionConstruction.cpp.o -c /<>/dolfin/geometry/IntersectionConstruction.cpp [ 37%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/MeshPointIntersection.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/geometry/MeshPointIntersection.cpp.o -c /<>/dolfin/geometry/MeshPointIntersection.cpp [ 37%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/Point.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/geometry/Point.cpp.o -c /<>/dolfin/geometry/Point.cpp [ 37%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/predicates.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/geometry/predicates.cpp.o -c /<>/dolfin/geometry/predicates.cpp [ 37%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/SimplexQuadrature.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/geometry/SimplexQuadrature.cpp.o -c /<>/dolfin/geometry/SimplexQuadrature.cpp [ 39%] Building CXX object dolfin/CMakeFiles/dolfin.dir/graph/BoostGraphOrdering.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/graph/BoostGraphOrdering.cpp.o -c /<>/dolfin/graph/BoostGraphOrdering.cpp [ 39%] Building CXX object dolfin/CMakeFiles/dolfin.dir/graph/GraphBuilder.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/graph/GraphBuilder.cpp.o -c /<>/dolfin/graph/GraphBuilder.cpp [ 39%] Building CXX object dolfin/CMakeFiles/dolfin.dir/graph/GraphColoring.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/graph/GraphColoring.cpp.o -c /<>/dolfin/graph/GraphColoring.cpp [ 40%] Building CXX object dolfin/CMakeFiles/dolfin.dir/graph/ParMETIS.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/graph/ParMETIS.cpp.o -c /<>/dolfin/graph/ParMETIS.cpp [ 40%] Building CXX object dolfin/CMakeFiles/dolfin.dir/graph/SCOTCH.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/graph/SCOTCH.cpp.o -c /<>/dolfin/graph/SCOTCH.cpp [ 40%] Building CXX object dolfin/CMakeFiles/dolfin.dir/graph/ZoltanInterface.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/graph/ZoltanInterface.cpp.o -c /<>/dolfin/graph/ZoltanInterface.cpp [ 40%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/base64.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/base64.cpp.o -c /<>/dolfin/io/base64.cpp [ 42%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/File.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/File.cpp.o -c /<>/dolfin/io/File.cpp [ 42%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/GenericFile.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/GenericFile.cpp.o -c /<>/dolfin/io/GenericFile.cpp [ 42%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/HDF5Attribute.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/HDF5Attribute.cpp.o -c /<>/dolfin/io/HDF5Attribute.cpp [ 43%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/HDF5File.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/HDF5File.cpp.o -c /<>/dolfin/io/HDF5File.cpp [ 43%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/HDF5Interface.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/HDF5Interface.cpp.o -c /<>/dolfin/io/HDF5Interface.cpp [ 43%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/HDF5Utility.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/HDF5Utility.cpp.o -c /<>/dolfin/io/HDF5Utility.cpp [ 45%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/pugixml.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/pugixml.cpp.o -c /<>/dolfin/io/pugixml.cpp [ 45%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/RAWFile.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/RAWFile.cpp.o -c /<>/dolfin/io/RAWFile.cpp [ 45%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/SVGFile.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/SVGFile.cpp.o -c /<>/dolfin/io/SVGFile.cpp [ 45%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/VTKFile.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/VTKFile.cpp.o -c /<>/dolfin/io/VTKFile.cpp [ 46%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/VTKWriter.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/VTKWriter.cpp.o -c /<>/dolfin/io/VTKWriter.cpp [ 46%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/X3DFile.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/X3DFile.cpp.o -c /<>/dolfin/io/X3DFile.cpp [ 46%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/X3DOM.cpp.o [ 48%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/XDMFFile.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/X3DOM.cpp.o -c /<>/dolfin/io/X3DOM.cpp cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/XDMFFile.cpp.o -c /<>/dolfin/io/XDMFFile.cpp [ 48%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/XMLFile.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/XMLFile.cpp.o -c /<>/dolfin/io/XMLFile.cpp [ 48%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/XMLFunctionData.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/XMLFunctionData.cpp.o -c /<>/dolfin/io/XMLFunctionData.cpp [ 48%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/XMLMesh.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/XMLMesh.cpp.o -c /<>/dolfin/io/XMLMesh.cpp [ 50%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/XMLParameters.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/XMLParameters.cpp.o -c /<>/dolfin/io/XMLParameters.cpp [ 50%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/XMLTable.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/XMLTable.cpp.o -c /<>/dolfin/io/XMLTable.cpp [ 50%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/xmlutils.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/xmlutils.cpp.o -c /<>/dolfin/io/xmlutils.cpp [ 51%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/XMLVector.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/XMLVector.cpp.o -c /<>/dolfin/io/XMLVector.cpp [ 51%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/XYZFile.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/io/XYZFile.cpp.o -c /<>/dolfin/io/XYZFile.cpp [ 51%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/Amesos2LUSolver.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/Amesos2LUSolver.cpp.o -c /<>/dolfin/la/Amesos2LUSolver.cpp [ 51%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/BelosKrylovSolver.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/BelosKrylovSolver.cpp.o -c /<>/dolfin/la/BelosKrylovSolver.cpp [ 53%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/BlockMatrix.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/BlockMatrix.cpp.o -c /<>/dolfin/la/BlockMatrix.cpp [ 53%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/BlockVector.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/BlockVector.cpp.o -c /<>/dolfin/la/BlockVector.cpp [ 53%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/CoordinateMatrix.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/CoordinateMatrix.cpp.o -c /<>/dolfin/la/CoordinateMatrix.cpp [ 54%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/DefaultFactory.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/DefaultFactory.cpp.o -c /<>/dolfin/la/DefaultFactory.cpp [ 54%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/EigenFactory.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/EigenFactory.cpp.o -c /<>/dolfin/la/EigenFactory.cpp [ 54%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/EigenKrylovSolver.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/EigenKrylovSolver.cpp.o -c /<>/dolfin/la/EigenKrylovSolver.cpp [ 54%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/EigenLUSolver.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/EigenLUSolver.cpp.o -c /<>/dolfin/la/EigenLUSolver.cpp [ 56%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/EigenMatrix.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/EigenMatrix.cpp.o -c /<>/dolfin/la/EigenMatrix.cpp [ 56%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/EigenVector.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/EigenVector.cpp.o -c /<>/dolfin/la/EigenVector.cpp [ 56%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/GenericLinearSolver.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/GenericLinearSolver.cpp.o -c /<>/dolfin/la/GenericLinearSolver.cpp [ 57%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/GenericMatrix.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/GenericMatrix.cpp.o -c /<>/dolfin/la/GenericMatrix.cpp [ 57%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/Ifpack2Preconditioner.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/Ifpack2Preconditioner.cpp.o -c /<>/dolfin/la/Ifpack2Preconditioner.cpp [ 57%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/IndexMap.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/IndexMap.cpp.o -c /<>/dolfin/la/IndexMap.cpp [ 57%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/KrylovSolver.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/KrylovSolver.cpp.o -c /<>/dolfin/la/KrylovSolver.cpp [ 59%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/LinearOperator.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/LinearOperator.cpp.o -c /<>/dolfin/la/LinearOperator.cpp [ 59%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/LinearSolver.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/LinearSolver.cpp.o -c /<>/dolfin/la/LinearSolver.cpp [ 59%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/LUSolver.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/LUSolver.cpp.o -c /<>/dolfin/la/LUSolver.cpp [ 60%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/MueluPreconditioner.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/MueluPreconditioner.cpp.o -c /<>/dolfin/la/MueluPreconditioner.cpp [ 60%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/PETScBaseMatrix.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/PETScBaseMatrix.cpp.o -c /<>/dolfin/la/PETScBaseMatrix.cpp [ 60%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/PETScFactory.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/PETScFactory.cpp.o -c /<>/dolfin/la/PETScFactory.cpp [ 62%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/PETScKrylovSolver.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/PETScKrylovSolver.cpp.o -c /<>/dolfin/la/PETScKrylovSolver.cpp [ 62%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/PETScLinearOperator.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/PETScLinearOperator.cpp.o -c /<>/dolfin/la/PETScLinearOperator.cpp [ 62%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/PETScLUSolver.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/PETScLUSolver.cpp.o -c /<>/dolfin/la/PETScLUSolver.cpp [ 62%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/PETScMatrix.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/PETScMatrix.cpp.o -c /<>/dolfin/la/PETScMatrix.cpp [ 64%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/PETScObject.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/PETScObject.cpp.o -c /<>/dolfin/la/PETScObject.cpp [ 64%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/PETScOptions.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/PETScOptions.cpp.o -c /<>/dolfin/la/PETScOptions.cpp [ 64%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/PETScPreconditioner.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/PETScPreconditioner.cpp.o -c /<>/dolfin/la/PETScPreconditioner.cpp [ 65%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/PETScVector.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/PETScVector.cpp.o -c /<>/dolfin/la/PETScVector.cpp [ 65%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/SLEPcEigenSolver.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/SLEPcEigenSolver.cpp.o -c /<>/dolfin/la/SLEPcEigenSolver.cpp [ 65%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/solve.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/solve.cpp.o -c /<>/dolfin/la/solve.cpp [ 65%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/SparsityPattern.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/SparsityPattern.cpp.o -c /<>/dolfin/la/SparsityPattern.cpp [ 67%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/TensorLayout.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/TensorLayout.cpp.o -c /<>/dolfin/la/TensorLayout.cpp [ 67%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/test_nullspace.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/test_nullspace.cpp.o -c /<>/dolfin/la/test_nullspace.cpp [ 68%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/TpetraFactory.cpp.o [ 68%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/TpetraMatrix.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/TpetraMatrix.cpp.o -c /<>/dolfin/la/TpetraMatrix.cpp cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/TpetraFactory.cpp.o -c /<>/dolfin/la/TpetraFactory.cpp [ 68%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/TpetraVector.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/TpetraVector.cpp.o -c /<>/dolfin/la/TpetraVector.cpp [ 68%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/TrilinosParameters.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/TrilinosParameters.cpp.o -c /<>/dolfin/la/TrilinosParameters.cpp [ 68%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/VectorSpaceBasis.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/la/VectorSpaceBasis.cpp.o -c /<>/dolfin/la/VectorSpaceBasis.cpp [ 70%] Building CXX object dolfin/CMakeFiles/dolfin.dir/log/Event.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/log/Event.cpp.o -c /<>/dolfin/log/Event.cpp [ 70%] Building CXX object dolfin/CMakeFiles/dolfin.dir/log/log.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/log/log.cpp.o -c /<>/dolfin/log/log.cpp [ 70%] Building CXX object dolfin/CMakeFiles/dolfin.dir/log/Logger.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/log/Logger.cpp.o -c /<>/dolfin/log/Logger.cpp [ 71%] Building CXX object dolfin/CMakeFiles/dolfin.dir/log/LogManager.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/log/LogManager.cpp.o -c /<>/dolfin/log/LogManager.cpp [ 71%] Building CXX object dolfin/CMakeFiles/dolfin.dir/log/LogStream.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/log/LogStream.cpp.o -c /<>/dolfin/log/LogStream.cpp [ 71%] Building CXX object dolfin/CMakeFiles/dolfin.dir/log/Progress.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/log/Progress.cpp.o -c /<>/dolfin/log/Progress.cpp [ 71%] Building CXX object dolfin/CMakeFiles/dolfin.dir/log/Table.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/log/Table.cpp.o -c /<>/dolfin/log/Table.cpp [ 73%] Building CXX object dolfin/CMakeFiles/dolfin.dir/math/basic.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/math/basic.cpp.o -c /<>/dolfin/math/basic.cpp [ 73%] Building CXX object dolfin/CMakeFiles/dolfin.dir/math/Lagrange.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/math/Lagrange.cpp.o -c /<>/dolfin/math/Lagrange.cpp [ 73%] Building CXX object dolfin/CMakeFiles/dolfin.dir/math/Legendre.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/math/Legendre.cpp.o -c /<>/dolfin/math/Legendre.cpp [ 75%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/BoundaryComputation.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/BoundaryComputation.cpp.o -c /<>/dolfin/mesh/BoundaryComputation.cpp [ 75%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/BoundaryMesh.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/BoundaryMesh.cpp.o -c /<>/dolfin/mesh/BoundaryMesh.cpp [ 75%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/Cell.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/Cell.cpp.o -c /<>/dolfin/mesh/Cell.cpp [ 76%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/CellType.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/CellType.cpp.o -c /<>/dolfin/mesh/CellType.cpp [ 76%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/DistributedMeshTools.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/DistributedMeshTools.cpp.o -c /<>/dolfin/mesh/DistributedMeshTools.cpp [ 76%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/DynamicMeshEditor.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/DynamicMeshEditor.cpp.o -c /<>/dolfin/mesh/DynamicMeshEditor.cpp [ 76%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/Edge.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/Edge.cpp.o -c /<>/dolfin/mesh/Edge.cpp [ 78%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/Face.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/Face.cpp.o -c /<>/dolfin/mesh/Face.cpp [ 78%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/FacetCell.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/FacetCell.cpp.o -c /<>/dolfin/mesh/FacetCell.cpp [ 78%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/Facet.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/Facet.cpp.o -c /<>/dolfin/mesh/Facet.cpp [ 79%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/HexahedronCell.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/HexahedronCell.cpp.o -c /<>/dolfin/mesh/HexahedronCell.cpp [ 79%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/IntervalCell.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/IntervalCell.cpp.o -c /<>/dolfin/mesh/IntervalCell.cpp [ 79%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/LocalMeshData.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/LocalMeshData.cpp.o -c /<>/dolfin/mesh/LocalMeshData.cpp [ 79%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshColoring.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/MeshColoring.cpp.o -c /<>/dolfin/mesh/MeshColoring.cpp [ 81%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshConnectivity.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/MeshConnectivity.cpp.o -c /<>/dolfin/mesh/MeshConnectivity.cpp [ 81%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/Mesh.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/Mesh.cpp.o -c /<>/dolfin/mesh/Mesh.cpp [ 81%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshData.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/MeshData.cpp.o -c /<>/dolfin/mesh/MeshData.cpp [ 82%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshDomains.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/MeshDomains.cpp.o -c /<>/dolfin/mesh/MeshDomains.cpp [ 82%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshEditor.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/MeshEditor.cpp.o -c /<>/dolfin/mesh/MeshEditor.cpp [ 82%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshEntity.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/MeshEntity.cpp.o -c /<>/dolfin/mesh/MeshEntity.cpp [ 82%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshFunction.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/MeshFunction.cpp.o -c /<>/dolfin/mesh/MeshFunction.cpp [ 84%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshGeometry.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/MeshGeometry.cpp.o -c /<>/dolfin/mesh/MeshGeometry.cpp [ 84%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshHierarchy.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/MeshHierarchy.cpp.o -c /<>/dolfin/mesh/MeshHierarchy.cpp [ 84%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshOrdering.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/MeshOrdering.cpp.o -c /<>/dolfin/mesh/MeshOrdering.cpp [ 85%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshPartitioning.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/MeshPartitioning.cpp.o -c /<>/dolfin/mesh/MeshPartitioning.cpp [ 85%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshQuality.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/MeshQuality.cpp.o -c /<>/dolfin/mesh/MeshQuality.cpp [ 85%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshRenumbering.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/MeshRenumbering.cpp.o -c /<>/dolfin/mesh/MeshRenumbering.cpp [ 85%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshSmoothing.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/MeshSmoothing.cpp.o -c /<>/dolfin/mesh/MeshSmoothing.cpp [ 87%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshTopology.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/MeshTopology.cpp.o -c /<>/dolfin/mesh/MeshTopology.cpp [ 87%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshTransformation.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/MeshTransformation.cpp.o -c /<>/dolfin/mesh/MeshTransformation.cpp [ 87%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MultiMesh.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/MultiMesh.cpp.o -c /<>/dolfin/mesh/MultiMesh.cpp [ 89%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/PeriodicBoundaryComputation.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/PeriodicBoundaryComputation.cpp.o -c /<>/dolfin/mesh/PeriodicBoundaryComputation.cpp [ 89%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/PointCell.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/PointCell.cpp.o -c /<>/dolfin/mesh/PointCell.cpp [ 89%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/QuadrilateralCell.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/QuadrilateralCell.cpp.o -c /<>/dolfin/mesh/QuadrilateralCell.cpp [ 89%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/SubDomain.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/SubDomain.cpp.o -c /<>/dolfin/mesh/SubDomain.cpp [ 90%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/SubMesh.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/SubMesh.cpp.o -c /<>/dolfin/mesh/SubMesh.cpp [ 90%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/TetrahedronCell.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/TetrahedronCell.cpp.o -c /<>/dolfin/mesh/TetrahedronCell.cpp [ 90%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/TopologyComputation.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/TopologyComputation.cpp.o -c /<>/dolfin/mesh/TopologyComputation.cpp [ 92%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/TriangleCell.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/mesh/TriangleCell.cpp.o -c /<>/dolfin/mesh/TriangleCell.cpp [ 92%] Building CXX object dolfin/CMakeFiles/dolfin.dir/multistage/MultiStageScheme.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/multistage/MultiStageScheme.cpp.o -c /<>/dolfin/multistage/MultiStageScheme.cpp [ 92%] Building CXX object dolfin/CMakeFiles/dolfin.dir/multistage/PointIntegralSolver.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/multistage/PointIntegralSolver.cpp.o -c /<>/dolfin/multistage/PointIntegralSolver.cpp [ 93%] Building CXX object dolfin/CMakeFiles/dolfin.dir/multistage/RKSolver.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/multistage/RKSolver.cpp.o -c /<>/dolfin/multistage/RKSolver.cpp [ 93%] Building CXX object dolfin/CMakeFiles/dolfin.dir/nls/NewtonSolver.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/nls/NewtonSolver.cpp.o -c /<>/dolfin/nls/NewtonSolver.cpp [ 93%] Building CXX object dolfin/CMakeFiles/dolfin.dir/nls/PETScSNESSolver.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/nls/PETScSNESSolver.cpp.o -c /<>/dolfin/nls/PETScSNESSolver.cpp [ 93%] Building CXX object dolfin/CMakeFiles/dolfin.dir/nls/PETScTAOSolver.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/nls/PETScTAOSolver.cpp.o -c /<>/dolfin/nls/PETScTAOSolver.cpp [ 95%] Building CXX object dolfin/CMakeFiles/dolfin.dir/nls/TAOLinearBoundSolver.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/nls/TAOLinearBoundSolver.cpp.o -c /<>/dolfin/nls/TAOLinearBoundSolver.cpp [ 95%] Building CXX object dolfin/CMakeFiles/dolfin.dir/parameter/GlobalParameters.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/parameter/GlobalParameters.cpp.o -c /<>/dolfin/parameter/GlobalParameters.cpp [ 95%] Building CXX object dolfin/CMakeFiles/dolfin.dir/parameter/Parameter.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/parameter/Parameter.cpp.o -c /<>/dolfin/parameter/Parameter.cpp [ 96%] Building CXX object dolfin/CMakeFiles/dolfin.dir/parameter/Parameters.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Ddolfin_EXPORTS -I/<> -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/suitesparse -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/dolfin.dir/parameter/Parameters.cpp.o -c /<>/dolfin/parameter/Parameters.cpp [ 96%] Building CXX object dolfin/CMakeFiles/dolfin.dir/refinement/BisectionRefinement1D.cpp.o cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/c++ 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CMakeFiles/dolfin.dir/multistage/RKSolver.cpp.o CMakeFiles/dolfin.dir/nls/NewtonSolver.cpp.o CMakeFiles/dolfin.dir/nls/PETScSNESSolver.cpp.o CMakeFiles/dolfin.dir/nls/PETScTAOSolver.cpp.o CMakeFiles/dolfin.dir/nls/TAOLinearBoundSolver.cpp.o CMakeFiles/dolfin.dir/parameter/GlobalParameters.cpp.o CMakeFiles/dolfin.dir/parameter/Parameter.cpp.o CMakeFiles/dolfin.dir/parameter/Parameters.cpp.o CMakeFiles/dolfin.dir/refinement/BisectionRefinement1D.cpp.o CMakeFiles/dolfin.dir/refinement/LocalMeshCoarsening.cpp.o CMakeFiles/dolfin.dir/refinement/ParallelRefinement.cpp.o CMakeFiles/dolfin.dir/refinement/PlazaRefinementND.cpp.o CMakeFiles/dolfin.dir/refinement/refine.cpp.o CMakeFiles/dolfin.dir/refinement/RegularCutRefinement.cpp.o CMakeFiles/dolfin.dir/ts/CVode.cpp.o /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_filesystem.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so /usr/lib/x86_64-linux-gnu/libboost_iostreams.so 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/usr/lib/x86_64-linux-gnu/librt.so /usr/lib/x86_64-linux-gnu/liblapack.so /usr/lib/gcc/x86_64-linux-gnu/8/libgfortran.so /usr/lib/x86_64-linux-gnu/libptscotch.so /usr/lib/x86_64-linux-gnu/libscotch.so /usr/lib/x86_64-linux-gnu/libptscotcherr.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib/libpetsc_real.so cd /<>/obj-x86_64-linux-gnu/dolfin && /usr/bin/cmake -E cmake_symlink_library libdolfin.so.2018.1.0 libdolfin.so.2018.1 libdolfin.so make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' [100%] Built target dolfin make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /<>/obj-x86_64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/<>/obj-x86_64-linux-gnu' debian/rules override_dh_auto_test-arch make[1]: Entering directory '/<>' py3versions: no X-Python3-Version in control file, using supported versions case " hurd-i386 m68k sh4 " in \ *\ amd64\ *) echo "ALL tests have been disabled on amd64";; \ *) set -e; \ cp -ra obj-x86_64-linux-gnu installation-build; \ cd obj-x86_64-linux-gnu; \ make -j4 unittests; \ make -j4 demos; \ case " i386 mips64el ppc64el " in \ *\ amd64\ *) IGNORE_MPI_TESTS="demo_hyperelasticity_mpi demo_cahn-hilliard_mpi demo_navier-stokes_mpi demo_elasticity_mpi demo_elastodynamics_mpi ";; \ *) IGNORE_MPI_TESTS="demo_hyperelasticity_mpi ";; \ esac; \ echo "set(CTEST_CUSTOM_TESTS_IGNORE ${IGNORE_MPI_TESTS} )" >> CTestCustom.cmake; \ echo "Run C++ unit tests (serial)"; \ LD_LIBRARY_PATH=/<>//obj-x86_64-linux-gnu/dolfin:${LD_LIBRARY_PATH} ctest -R unittests; \ echo "Run C++ regressions tests (serial)"; \ LD_LIBRARY_PATH=/<>//obj-x86_64-linux-gnu/dolfin:${LD_LIBRARY_PATH} ctest -j4 -R demo -R serial; \ echo "Run C++ regression tests (MPI)"; \ case " armel armhf i386 hppa m68k powerpc " in \ *\ amd64\ *) echo "MPI tests have been disabled on amd64";; \ *) LD_LIBRARY_PATH=/<>//obj-x86_64-linux-gnu/dolfin:${LD_LIBRARY_PATH} ctest -j2 -R demo -R mpi;; \ esac; \ cd ..; \ mv obj-x86_64-linux-gnu build-tests; \ mv installation-build obj-x86_64-linux-gnu;; \ esac make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' /usr/bin/cmake -S/<> -B/<>/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 unittests make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' /usr/bin/cmake -S/<> -B/<>/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/obj-x86_64-linux-gnu/CMakeFiles 69 make -f CMakeFiles/Makefile2 test/unit/cpp/CMakeFiles/unittests.dir/all make[4]: Entering directory '/<>/obj-x86_64-linux-gnu' make -f dolfin/ale/CMakeFiles/compile_ale_forms.dir/build.make dolfin/ale/CMakeFiles/compile_ale_forms.dir/depend make[5]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/dolfin/ale /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/dolfin/ale /<>/obj-x86_64-linux-gnu/dolfin/ale/CMakeFiles/compile_ale_forms.dir/DependInfo.cmake --color= make[5]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f dolfin/ale/CMakeFiles/compile_ale_forms.dir/build.make dolfin/ale/CMakeFiles/compile_ale_forms.dir/build make[5]: Entering directory '/<>/obj-x86_64-linux-gnu' make[5]: Nothing to be done for 'dolfin/ale/CMakeFiles/compile_ale_forms.dir/build'. make[5]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 0%] Built target compile_ale_forms make -f dolfin/CMakeFiles/dolfin.dir/build.make dolfin/CMakeFiles/dolfin.dir/depend make[5]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/dolfin /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/dolfin /<>/obj-x86_64-linux-gnu/dolfin/CMakeFiles/dolfin.dir/DependInfo.cmake --color= make[5]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f dolfin/CMakeFiles/dolfin.dir/build.make dolfin/CMakeFiles/dolfin.dir/build make[5]: Entering directory '/<>/obj-x86_64-linux-gnu' make[5]: Nothing to be done for 'dolfin/CMakeFiles/dolfin.dir/build'. make[5]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 92%] Built target dolfin make -f test/unit/cpp/CMakeFiles/unittests.dir/build.make test/unit/cpp/CMakeFiles/unittests.dir/depend make[5]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test/unit/cpp /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/test/unit/cpp /<>/obj-x86_64-linux-gnu/test/unit/cpp/CMakeFiles/unittests.dir/DependInfo.cmake --color= Scanning dependencies of target unittests make[5]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f test/unit/cpp/CMakeFiles/unittests.dir/build.make test/unit/cpp/CMakeFiles/unittests.dir/build make[5]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 92%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/main.cpp.o cd /<>/obj-x86_64-linux-gnu/test/unit/cpp && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -I/<>/test/unit/cpp/catch -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/unittests.dir/main.cpp.o -c /<>/test/unit/cpp/main.cpp [ 92%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/common/SubSystemsManager.cpp.o cd /<>/obj-x86_64-linux-gnu/test/unit/cpp && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -I/<>/test/unit/cpp/catch -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/unittests.dir/common/SubSystemsManager.cpp.o -c /<>/test/unit/cpp/common/SubSystemsManager.cpp [ 94%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/function/Expression.cpp.o cd /<>/obj-x86_64-linux-gnu/test/unit/cpp && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -I/<>/test/unit/cpp/catch -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/unittests.dir/function/Expression.cpp.o -c /<>/test/unit/cpp/function/Expression.cpp [ 94%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/geometry/ConvexTriangulation.cpp.o cd /<>/obj-x86_64-linux-gnu/test/unit/cpp && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -I/<>/test/unit/cpp/catch -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/unittests.dir/geometry/ConvexTriangulation.cpp.o -c /<>/test/unit/cpp/geometry/ConvexTriangulation.cpp [ 94%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/geometry/IntersectionConstruction.cpp.o cd /<>/obj-x86_64-linux-gnu/test/unit/cpp && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -I/<>/test/unit/cpp/catch -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/unittests.dir/geometry/IntersectionConstruction.cpp.o -c /<>/test/unit/cpp/geometry/IntersectionConstruction.cpp [ 95%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/io/XMLMeshData.cpp.o cd /<>/obj-x86_64-linux-gnu/test/unit/cpp && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -I/<>/test/unit/cpp/catch -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/unittests.dir/io/XMLMeshData.cpp.o -c /<>/test/unit/cpp/io/XMLMeshData.cpp [ 95%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/io/XMLMeshValueCollection.cpp.o cd /<>/obj-x86_64-linux-gnu/test/unit/cpp && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -I/<>/test/unit/cpp/catch -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/unittests.dir/io/XMLMeshValueCollection.cpp.o -c /<>/test/unit/cpp/io/XMLMeshValueCollection.cpp [ 95%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/la/LinearOperator.cpp.o cd /<>/obj-x86_64-linux-gnu/test/unit/cpp && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -I/<>/test/unit/cpp/catch -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/unittests.dir/la/LinearOperator.cpp.o -c /<>/test/unit/cpp/la/LinearOperator.cpp [ 95%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/la/Vector.cpp.o cd /<>/obj-x86_64-linux-gnu/test/unit/cpp && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -I/<>/test/unit/cpp/catch -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/unittests.dir/la/Vector.cpp.o -c /<>/test/unit/cpp/la/Vector.cpp [ 97%] Building CXX object test/unit/cpp/CMakeFiles/unittests.dir/mesh/Mesh.cpp.o cd /<>/obj-x86_64-linux-gnu/test/unit/cpp && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -I/<>/test/unit/cpp/catch -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem 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CMakeFiles/demo_built-in-meshes.dir/main.cpp.o -c /<>/demo/documented/built-in-meshes/cpp/main.cpp [ 69%] Linking CXX executable demo_built-in-meshes cd /<>/obj-x86_64-linux-gnu/demo/documented/built-in-meshes/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_built-in-meshes.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/demo_built-in-meshes.dir/main.cpp.o -o demo_built-in-meshes ../../../../dolfin/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 69%] Built target demo_built-in-meshes make -f demo/documented/cahn-hilliard/cpp/CMakeFiles/demo_cahn-hilliard.dir/build.make demo/documented/cahn-hilliard/cpp/CMakeFiles/demo_cahn-hilliard.dir/depend make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/demo/documented/cahn-hilliard/cpp /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/demo/documented/cahn-hilliard/cpp /<>/obj-x86_64-linux-gnu/demo/documented/cahn-hilliard/cpp/CMakeFiles/demo_cahn-hilliard.dir/DependInfo.cmake --color= Scanning dependencies of target demo_cahn-hilliard make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f demo/documented/cahn-hilliard/cpp/CMakeFiles/demo_cahn-hilliard.dir/build.make demo/documented/cahn-hilliard/cpp/CMakeFiles/demo_cahn-hilliard.dir/build make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 69%] Building CXX object demo/documented/cahn-hilliard/cpp/CMakeFiles/demo_cahn-hilliard.dir/CahnHilliard2D.cpp.o cd /<>/obj-x86_64-linux-gnu/demo/documented/cahn-hilliard/cpp && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_cahn-hilliard.dir/CahnHilliard2D.cpp.o -c /<>/demo/documented/cahn-hilliard/cpp/CahnHilliard2D.cpp [ 69%] Linking CXX executable demo_bcs cd /<>/obj-x86_64-linux-gnu/demo/documented/bcs/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_bcs.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/demo_bcs.dir/main.cpp.o -o demo_bcs ../../../../dolfin/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 69%] Built target demo_bcs make -f demo/documented/eigenvalue/cpp/CMakeFiles/demo_eigenvalue.dir/build.make 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-DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_eigenvalue.dir/main.cpp.o -c /<>/demo/documented/eigenvalue/cpp/main.cpp [ 69%] Linking CXX executable demo_biharmonic cd /<>/obj-x86_64-linux-gnu/demo/documented/biharmonic/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_biharmonic.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/demo_biharmonic.dir/main.cpp.o -o demo_biharmonic ../../../../dolfin/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 69%] Built target demo_biharmonic make -f demo/documented/hyperelasticity/cpp/CMakeFiles/demo_hyperelasticity.dir/build.make demo/documented/hyperelasticity/cpp/CMakeFiles/demo_hyperelasticity.dir/depend make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/demo/documented/hyperelasticity/cpp /<>/obj-x86_64-linux-gnu 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/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_hyperelasticity.dir/main.cpp.o -c /<>/demo/documented/hyperelasticity/cpp/main.cpp [ 70%] Building CXX object demo/documented/cahn-hilliard/cpp/CMakeFiles/demo_cahn-hilliard.dir/CahnHilliard3D.cpp.o cd /<>/obj-x86_64-linux-gnu/demo/documented/cahn-hilliard/cpp && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_cahn-hilliard.dir/CahnHilliard3D.cpp.o -c /<>/demo/documented/cahn-hilliard/cpp/CahnHilliard3D.cpp [ 71%] Linking CXX executable demo_auto-adaptive-poisson cd /<>/obj-x86_64-linux-gnu/demo/documented/auto-adaptive-poisson/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_auto-adaptive-poisson.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/demo_auto-adaptive-poisson.dir/main.cpp.o -o demo_auto-adaptive-poisson ../../../../dolfin/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 71%] Built target demo_auto-adaptive-poisson [ 71%] Building CXX object demo/documented/cahn-hilliard/cpp/CMakeFiles/demo_cahn-hilliard.dir/main.cpp.o cd /<>/obj-x86_64-linux-gnu/demo/documented/cahn-hilliard/cpp && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_cahn-hilliard.dir/main.cpp.o -c /<>/demo/documented/cahn-hilliard/cpp/main.cpp make -f demo/documented/mixed-poisson/cpp/CMakeFiles/demo_mixed-poisson.dir/build.make demo/documented/mixed-poisson/cpp/CMakeFiles/demo_mixed-poisson.dir/depend make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/demo/documented/mixed-poisson/cpp /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/demo/documented/mixed-poisson/cpp /<>/obj-x86_64-linux-gnu/demo/documented/mixed-poisson/cpp/CMakeFiles/demo_mixed-poisson.dir/DependInfo.cmake --color= Scanning dependencies of target demo_mixed-poisson make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f 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[ 71%] Building CXX object demo/documented/navier-stokes/cpp/CMakeFiles/demo_navier-stokes.dir/main.cpp.o cd /<>/obj-x86_64-linux-gnu/demo/documented/navier-stokes/cpp && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_navier-stokes.dir/main.cpp.o -c /<>/demo/documented/navier-stokes/cpp/main.cpp [ 71%] Linking CXX executable demo_hyperelasticity cd /<>/obj-x86_64-linux-gnu/demo/documented/hyperelasticity/cpp && /usr/bin/cmake -E cmake_link_script 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-DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_neumann-poisson.dir/main.cpp.o -c /<>/demo/documented/neumann-poisson/cpp/main.cpp [ 72%] Linking CXX executable demo_cahn-hilliard cd /<>/obj-x86_64-linux-gnu/demo/documented/cahn-hilliard/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_cahn-hilliard.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro 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&& /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_nonlinear-poisson.dir/main.cpp.o -c /<>/demo/documented/nonlinear-poisson/cpp/main.cpp [ 73%] Linking CXX executable demo_mixed-poisson cd /<>/obj-x86_64-linux-gnu/demo/documented/mixed-poisson/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_mixed-poisson.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro 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-DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_nonmatching-interpolation.dir/main.cpp.o -c /<>/demo/documented/nonmatching-interpolation/cpp/main.cpp [ 73%] Linking CXX executable demo_neumann-poisson cd /<>/obj-x86_64-linux-gnu/demo/documented/neumann-poisson/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_neumann-poisson.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro 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/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_periodic.dir/main.cpp.o -c /<>/demo/documented/periodic/cpp/main.cpp [ 74%] Linking CXX executable demo_nonlinear-poisson cd /<>/obj-x86_64-linux-gnu/demo/documented/nonlinear-poisson/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_nonlinear-poisson.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/demo_nonlinear-poisson.dir/main.cpp.o -o demo_nonlinear-poisson ../../../../dolfin/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 74%] Built target demo_nonlinear-poisson make -f demo/documented/poisson/cpp/CMakeFiles/demo_poisson.dir/build.make demo/documented/poisson/cpp/CMakeFiles/demo_poisson.dir/depend make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/demo/documented/poisson/cpp /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/demo/documented/poisson/cpp /<>/obj-x86_64-linux-gnu/demo/documented/poisson/cpp/CMakeFiles/demo_poisson.dir/DependInfo.cmake --color= Scanning dependencies of target demo_poisson make[8]: 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76%] Linking CXX executable demo_periodic cd /<>/obj-x86_64-linux-gnu/demo/documented/periodic/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_periodic.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/demo_periodic.dir/main.cpp.o -o demo_periodic ../../../../dolfin/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so [ 76%] Linking CXX executable demo_navier-stokes cd 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demo/documented/stokes-taylor-hood/cpp/CMakeFiles/demo_stokes-taylor-hood.dir/main.cpp.o cd /<>/obj-x86_64-linux-gnu/demo/documented/stokes-taylor-hood/cpp && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_stokes-taylor-hood.dir/main.cpp.o -c /<>/demo/documented/stokes-taylor-hood/cpp/main.cpp [ 77%] Linking CXX executable demo_poisson cd /<>/obj-x86_64-linux-gnu/demo/documented/poisson/cpp && /usr/bin/cmake -E cmake_link_script 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-DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_subdomains.dir/main.cpp.o -c /<>/demo/documented/subdomains/cpp/main.cpp [ 77%] Linking CXX executable demo_singular-poisson cd /<>/obj-x86_64-linux-gnu/demo/documented/singular-poisson/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_singular-poisson.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/demo_singular-poisson.dir/main.cpp.o -o demo_singular-poisson ../../../../dolfin/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 77%] Built target demo_singular-poisson make -f demo/undocumented/advection-diffusion/cpp/CMakeFiles/demo_advection-diffusion.dir/build.make demo/undocumented/advection-diffusion/cpp/CMakeFiles/demo_advection-diffusion.dir/depend make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> 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-I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_advection-diffusion.dir/main.cpp.o -c /<>/demo/undocumented/advection-diffusion/cpp/main.cpp [ 78%] Linking CXX executable demo_subdomains cd /<>/obj-x86_64-linux-gnu/demo/documented/subdomains/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_subdomains.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/demo_subdomains.dir/main.cpp.o -o demo_subdomains ../../../../dolfin/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so 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--color= Scanning dependencies of target demo_ale make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f demo/undocumented/ale/cpp/CMakeFiles/demo_ale.dir/build.make demo/undocumented/ale/cpp/CMakeFiles/demo_ale.dir/build make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 78%] Building CXX object demo/undocumented/ale/cpp/CMakeFiles/demo_ale.dir/main.cpp.o cd /<>/obj-x86_64-linux-gnu/demo/undocumented/ale/cpp && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG 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/usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_auto-adaptive-navier-stokes.dir/main.cpp.o -c /<>/demo/undocumented/auto-adaptive-navier-stokes/cpp/main.cpp [ 80%] Linking CXX executable demo_stokes-iterative cd /<>/obj-x86_64-linux-gnu/demo/documented/stokes-iterative/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_stokes-iterative.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/demo_stokes-iterative.dir/main.cpp.o -o demo_stokes-iterative ../../../../dolfin/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 80%] Built target demo_stokes-iterative make -f demo/undocumented/block-matrix/cpp/CMakeFiles/demo_block-matrix.dir/build.make demo/undocumented/block-matrix/cpp/CMakeFiles/demo_block-matrix.dir/depend make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/demo/undocumented/block-matrix/cpp /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/demo/undocumented/block-matrix/cpp /<>/obj-x86_64-linux-gnu/demo/undocumented/block-matrix/cpp/CMakeFiles/demo_block-matrix.dir/DependInfo.cmake --color= Scanning dependencies of target demo_block-matrix make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f 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Leaving directory '/<>/obj-x86_64-linux-gnu' [ 81%] Built target demo_ale make -f demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/build.make demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/depend make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/demo/undocumented/conditional/cpp /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/demo/undocumented/conditional/cpp /<>/obj-x86_64-linux-gnu/demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/DependInfo.cmake --color= Scanning dependencies of target demo_conditional make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/build.make demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/build make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 81%] Building CXX object demo/undocumented/conditional/cpp/CMakeFiles/demo_conditional.dir/main.cpp.o cd /<>/obj-x86_64-linux-gnu/demo/undocumented/conditional/cpp && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_conditional.dir/main.cpp.o -c /<>/demo/undocumented/conditional/cpp/main.cpp [ 81%] Linking CXX executable demo_advection-diffusion cd /<>/obj-x86_64-linux-gnu/demo/undocumented/advection-diffusion/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_advection-diffusion.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/demo_advection-diffusion.dir/main.cpp.o -o demo_advection-diffusion ../../../../dolfin/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 81%] Built target demo_advection-diffusion make -f demo/undocumented/contact-vi-snes/cpp/CMakeFiles/demo_contact-vi-snes.dir/build.make 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/usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_contact-vi-snes.dir/main.cpp.o -c /<>/demo/undocumented/contact-vi-snes/cpp/main.cpp [ 81%] Linking CXX executable demo_block-matrix cd /<>/obj-x86_64-linux-gnu/demo/undocumented/block-matrix/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_block-matrix.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro 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/usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/demo/undocumented/contact-vi-tao/cpp /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/demo/undocumented/contact-vi-tao/cpp /<>/obj-x86_64-linux-gnu/demo/undocumented/contact-vi-tao/cpp/CMakeFiles/demo_contact-vi-tao.dir/DependInfo.cmake --color= Scanning dependencies of target demo_contact-vi-tao make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f demo/undocumented/contact-vi-tao/cpp/CMakeFiles/demo_contact-vi-tao.dir/build.make demo/undocumented/contact-vi-tao/cpp/CMakeFiles/demo_contact-vi-tao.dir/build make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 82%] Building CXX object demo/undocumented/contact-vi-tao/cpp/CMakeFiles/demo_contact-vi-tao.dir/main.cpp.o cd /<>/obj-x86_64-linux-gnu/demo/undocumented/contact-vi-tao/cpp && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_contact-vi-tao.dir/main.cpp.o -c /<>/demo/undocumented/contact-vi-tao/cpp/main.cpp [ 83%] Linking CXX executable demo_conditional cd /<>/obj-x86_64-linux-gnu/demo/undocumented/conditional/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_conditional.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/demo_conditional.dir/main.cpp.o -o demo_conditional ../../../../dolfin/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 83%] Built target demo_conditional make -f demo/undocumented/curl-curl/cpp/CMakeFiles/demo_curl-curl.dir/build.make demo/undocumented/curl-curl/cpp/CMakeFiles/demo_curl-curl.dir/depend make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/demo/undocumented/curl-curl/cpp /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/demo/undocumented/curl-curl/cpp /<>/obj-x86_64-linux-gnu/demo/undocumented/curl-curl/cpp/CMakeFiles/demo_curl-curl.dir/DependInfo.cmake --color= Scanning dependencies of target demo_curl-curl make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f demo/undocumented/curl-curl/cpp/CMakeFiles/demo_curl-curl.dir/build.make demo/undocumented/curl-curl/cpp/CMakeFiles/demo_curl-curl.dir/build make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 83%] Building CXX object demo/undocumented/curl-curl/cpp/CMakeFiles/demo_curl-curl.dir/main.cpp.o cd /<>/obj-x86_64-linux-gnu/demo/undocumented/curl-curl/cpp && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_curl-curl.dir/main.cpp.o -c /<>/demo/undocumented/curl-curl/cpp/main.cpp [ 83%] Linking CXX executable demo_contact-vi-tao cd /<>/obj-x86_64-linux-gnu/demo/undocumented/contact-vi-tao/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_contact-vi-tao.dir/link.txt --verbose=1 [ 83%] Linking CXX executable demo_contact-vi-snes /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/demo_contact-vi-tao.dir/main.cpp.o -o demo_contact-vi-tao ../../../../dolfin/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so cd /<>/obj-x86_64-linux-gnu/demo/undocumented/contact-vi-snes/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_contact-vi-snes.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/demo_contact-vi-snes.dir/main.cpp.o -o demo_contact-vi-snes ../../../../dolfin/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 83%] Built target demo_contact-vi-snes make -f demo/undocumented/dg-advection-diffusion/cpp/CMakeFiles/demo_dg-advection-diffusion.dir/build.make demo/undocumented/dg-advection-diffusion/cpp/CMakeFiles/demo_dg-advection-diffusion.dir/depend make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/demo/undocumented/dg-advection-diffusion/cpp /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/demo/undocumented/dg-advection-diffusion/cpp /<>/obj-x86_64-linux-gnu/demo/undocumented/dg-advection-diffusion/cpp/CMakeFiles/demo_dg-advection-diffusion.dir/DependInfo.cmake --color= [ 83%] Built target demo_contact-vi-tao make -f demo/undocumented/dg-poisson/cpp/CMakeFiles/demo_dg-poisson.dir/build.make demo/undocumented/dg-poisson/cpp/CMakeFiles/demo_dg-poisson.dir/depend make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/demo/undocumented/dg-poisson/cpp /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/demo/undocumented/dg-poisson/cpp /<>/obj-x86_64-linux-gnu/demo/undocumented/dg-poisson/cpp/CMakeFiles/demo_dg-poisson.dir/DependInfo.cmake --color= Scanning dependencies of target demo_dg-advection-diffusion Scanning dependencies of target demo_dg-poisson make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f demo/undocumented/dg-poisson/cpp/CMakeFiles/demo_dg-poisson.dir/build.make demo/undocumented/dg-poisson/cpp/CMakeFiles/demo_dg-poisson.dir/build make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f demo/undocumented/dg-advection-diffusion/cpp/CMakeFiles/demo_dg-advection-diffusion.dir/build.make demo/undocumented/dg-advection-diffusion/cpp/CMakeFiles/demo_dg-advection-diffusion.dir/build make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 84%] Building CXX object demo/undocumented/dg-advection-diffusion/cpp/CMakeFiles/demo_dg-advection-diffusion.dir/main.cpp.o cd /<>/obj-x86_64-linux-gnu/demo/undocumented/dg-advection-diffusion/cpp && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_dg-advection-diffusion.dir/main.cpp.o -c /<>/demo/undocumented/dg-advection-diffusion/cpp/main.cpp [ 84%] Building CXX object demo/undocumented/dg-poisson/cpp/CMakeFiles/demo_dg-poisson.dir/main.cpp.o cd /<>/obj-x86_64-linux-gnu/demo/undocumented/dg-poisson/cpp && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_dg-poisson.dir/main.cpp.o -c /<>/demo/undocumented/dg-poisson/cpp/main.cpp [ 85%] Linking CXX executable demo_dg-poisson cd /<>/obj-x86_64-linux-gnu/demo/undocumented/dg-poisson/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dg-poisson.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/demo_dg-poisson.dir/main.cpp.o -o demo_dg-poisson ../../../../dolfin/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 85%] Built target demo_dg-poisson make -f demo/undocumented/elasticity/cpp/CMakeFiles/demo_elasticity.dir/build.make demo/undocumented/elasticity/cpp/CMakeFiles/demo_elasticity.dir/depend make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/demo/undocumented/elasticity/cpp /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/demo/undocumented/elasticity/cpp /<>/obj-x86_64-linux-gnu/demo/undocumented/elasticity/cpp/CMakeFiles/demo_elasticity.dir/DependInfo.cmake --color= Scanning dependencies of target demo_elasticity make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f demo/undocumented/elasticity/cpp/CMakeFiles/demo_elasticity.dir/build.make 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[ 86%] Built target demo_auto-adaptive-navier-stokes make -f demo/undocumented/elastodynamics/cpp/CMakeFiles/demo_elastodynamics.dir/build.make demo/undocumented/elastodynamics/cpp/CMakeFiles/demo_elastodynamics.dir/depend make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/demo/undocumented/elastodynamics/cpp /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/demo/undocumented/elastodynamics/cpp /<>/obj-x86_64-linux-gnu/demo/undocumented/elastodynamics/cpp/CMakeFiles/demo_elastodynamics.dir/DependInfo.cmake --color= make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 86%] Built target demo_curl-curl make -f demo/undocumented/eval/cpp/CMakeFiles/demo_eval.dir/build.make demo/undocumented/eval/cpp/CMakeFiles/demo_eval.dir/depend make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> 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-DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_elastodynamics.dir/main.cpp.o -c /<>/demo/undocumented/elastodynamics/cpp/main.cpp make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 87%] Building CXX object demo/undocumented/eval/cpp/CMakeFiles/demo_eval.dir/main.cpp.o cd /<>/obj-x86_64-linux-gnu/demo/undocumented/eval/cpp && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_eval.dir/main.cpp.o -c /<>/demo/undocumented/eval/cpp/main.cpp [ 87%] Linking CXX executable demo_dg-advection-diffusion cd /<>/obj-x86_64-linux-gnu/demo/undocumented/dg-advection-diffusion/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dg-advection-diffusion.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/demo_dg-advection-diffusion.dir/main.cpp.o -o demo_dg-advection-diffusion ../../../../dolfin/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 87%] Built target demo_dg-advection-diffusion make -f demo/undocumented/extrapolation/cpp/CMakeFiles/demo_extrapolation.dir/build.make demo/undocumented/extrapolation/cpp/CMakeFiles/demo_extrapolation.dir/depend make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/demo/undocumented/extrapolation/cpp /<>/obj-x86_64-linux-gnu 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/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_extrapolation.dir/main.cpp.o -c /<>/demo/undocumented/extrapolation/cpp/main.cpp [ 87%] Linking CXX executable demo_elasticity cd /<>/obj-x86_64-linux-gnu/demo/undocumented/elasticity/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_elasticity.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/demo_elasticity.dir/main.cpp.o -o demo_elasticity ../../../../dolfin/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 87%] Built target demo_elasticity make -f demo/undocumented/functional/cpp/CMakeFiles/demo_functional.dir/build.make demo/undocumented/functional/cpp/CMakeFiles/demo_functional.dir/depend make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/demo/undocumented/functional/cpp /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/demo/undocumented/functional/cpp /<>/obj-x86_64-linux-gnu/demo/undocumented/functional/cpp/CMakeFiles/demo_functional.dir/DependInfo.cmake --color= Scanning dependencies of target demo_functional make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f demo/undocumented/functional/cpp/CMakeFiles/demo_functional.dir/build.make demo/undocumented/functional/cpp/CMakeFiles/demo_functional.dir/build make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 87%] Building CXX object demo/undocumented/functional/cpp/CMakeFiles/demo_functional.dir/main.cpp.o cd /<>/obj-x86_64-linux-gnu/demo/undocumented/functional/cpp && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o 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Leaving directory '/<>/obj-x86_64-linux-gnu' [ 87%] Built target demo_eval make -f demo/undocumented/gmg-poisson/cpp/CMakeFiles/demo_gmg-poisson.dir/build.make demo/undocumented/gmg-poisson/cpp/CMakeFiles/demo_gmg-poisson.dir/depend make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/demo/undocumented/gmg-poisson/cpp /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/demo/undocumented/gmg-poisson/cpp /<>/obj-x86_64-linux-gnu/demo/undocumented/gmg-poisson/cpp/CMakeFiles/demo_gmg-poisson.dir/DependInfo.cmake --color= Scanning dependencies of target demo_gmg-poisson make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f demo/undocumented/gmg-poisson/cpp/CMakeFiles/demo_gmg-poisson.dir/build.make demo/undocumented/gmg-poisson/cpp/CMakeFiles/demo_gmg-poisson.dir/build make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 87%] Building CXX object demo/undocumented/gmg-poisson/cpp/CMakeFiles/demo_gmg-poisson.dir/main.cpp.o cd /<>/obj-x86_64-linux-gnu/demo/undocumented/gmg-poisson/cpp && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_gmg-poisson.dir/main.cpp.o -c /<>/demo/undocumented/gmg-poisson/cpp/main.cpp [ 87%] Linking CXX executable demo_elastodynamics cd /<>/obj-x86_64-linux-gnu/demo/undocumented/elastodynamics/cpp && /usr/bin/cmake -E cmake_link_script 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-DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_lift-drag.dir/main.cpp.o -c /<>/demo/undocumented/lift-drag/cpp/main.cpp [ 89%] Linking CXX executable demo_extrapolation cd /<>/obj-x86_64-linux-gnu/demo/undocumented/extrapolation/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_extrapolation.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/demo_extrapolation.dir/main.cpp.o -o demo_extrapolation ../../../../dolfin/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 89%] Built target demo_extrapolation make -f demo/undocumented/mesh-quality/cpp/CMakeFiles/demo_mesh-quality.dir/build.make demo/undocumented/mesh-quality/cpp/CMakeFiles/demo_mesh-quality.dir/depend make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/demo/undocumented/mesh-quality/cpp /<>/obj-x86_64-linux-gnu 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/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_mesh-quality.dir/main.cpp.o -c /<>/demo/undocumented/mesh-quality/cpp/main.cpp [ 89%] Linking CXX executable demo_functional cd /<>/obj-x86_64-linux-gnu/demo/undocumented/functional/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_functional.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/demo_functional.dir/main.cpp.o -o demo_functional ../../../../dolfin/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 89%] Built target demo_functional make -f demo/undocumented/meshfunction-refinement/cpp/CMakeFiles/demo_meshfunction-refinement.dir/build.make demo/undocumented/meshfunction-refinement/cpp/CMakeFiles/demo_meshfunction-refinement.dir/depend make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/demo/undocumented/meshfunction-refinement/cpp /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/demo/undocumented/meshfunction-refinement/cpp 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-isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_meshfunction-refinement.dir/main.cpp.o -c /<>/demo/undocumented/meshfunction-refinement/cpp/main.cpp [ 90%] Linking CXX executable demo_mesh-quality cd /<>/obj-x86_64-linux-gnu/demo/undocumented/mesh-quality/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_mesh-quality.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/demo_mesh-quality.dir/main.cpp.o -o demo_mesh-quality ../../../../dolfin/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 90%] Built target demo_mesh-quality make -f demo/undocumented/multimesh-poisson/cpp/CMakeFiles/demo_multimesh-poisson.dir/build.make demo/undocumented/multimesh-poisson/cpp/CMakeFiles/demo_multimesh-poisson.dir/depend make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/demo/undocumented/multimesh-poisson/cpp /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/demo/undocumented/multimesh-poisson/cpp 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-isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_multimesh-poisson.dir/main.cpp.o -c /<>/demo/undocumented/multimesh-poisson/cpp/main.cpp [ 91%] Linking CXX executable demo_gmg-poisson cd /<>/obj-x86_64-linux-gnu/demo/undocumented/gmg-poisson/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_gmg-poisson.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/demo_gmg-poisson.dir/main.cpp.o -o demo_gmg-poisson ../../../../dolfin/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 91%] Built target demo_gmg-poisson make -f demo/undocumented/multimesh-stokes/cpp/CMakeFiles/demo_multimesh-stokes.dir/build.make demo/undocumented/multimesh-stokes/cpp/CMakeFiles/demo_multimesh-stokes.dir/depend make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/demo/undocumented/multimesh-stokes/cpp /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/demo/undocumented/multimesh-stokes/cpp /<>/obj-x86_64-linux-gnu/demo/undocumented/multimesh-stokes/cpp/CMakeFiles/demo_multimesh-stokes.dir/DependInfo.cmake --color= Scanning dependencies of target 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/usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_multimesh-stokes.dir/main.cpp.o -c /<>/demo/undocumented/multimesh-stokes/cpp/main.cpp [ 91%] Linking CXX executable demo_lift-drag cd /<>/obj-x86_64-linux-gnu/demo/undocumented/lift-drag/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_lift-drag.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/demo_lift-drag.dir/main.cpp.o -o demo_lift-drag ../../../../dolfin/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so 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-fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_nonmatching-projection.dir/main.cpp.o -c /<>/demo/undocumented/nonmatching-projection/cpp/main.cpp [ 91%] Linking CXX executable demo_meshfunction-refinement cd /<>/obj-x86_64-linux-gnu/demo/undocumented/meshfunction-refinement/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_meshfunction-refinement.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/demo_meshfunction-refinement.dir/main.cpp.o -o demo_meshfunction-refinement ../../../../dolfin/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so 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-std=c++11 -o CMakeFiles/demo_parallel-refinement.dir/main.cpp.o -c /<>/demo/undocumented/parallel-refinement/cpp/main.cpp [ 91%] Linking CXX executable demo_multimesh-poisson cd /<>/obj-x86_64-linux-gnu/demo/undocumented/multimesh-poisson/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_multimesh-poisson.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/demo_multimesh-poisson.dir/main.cpp.o -o demo_multimesh-poisson ../../../../dolfin/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 91%] Built target demo_multimesh-poisson make -f demo/undocumented/parameters/cpp/CMakeFiles/demo_parameters.dir/build.make demo/undocumented/parameters/cpp/CMakeFiles/demo_parameters.dir/depend make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/demo/undocumented/parameters/cpp /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/demo/undocumented/parameters/cpp /<>/obj-x86_64-linux-gnu/demo/undocumented/parameters/cpp/CMakeFiles/demo_parameters.dir/DependInfo.cmake --color= Scanning dependencies of target demo_parameters make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f demo/undocumented/parameters/cpp/CMakeFiles/demo_parameters.dir/build.make demo/undocumented/parameters/cpp/CMakeFiles/demo_parameters.dir/build make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 92%] Building CXX object demo/undocumented/parameters/cpp/CMakeFiles/demo_parameters.dir/main.cpp.o cd /<>/obj-x86_64-linux-gnu/demo/undocumented/parameters/cpp && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_parameters.dir/main.cpp.o -c /<>/demo/undocumented/parameters/cpp/main.cpp [ 92%] Linking CXX executable demo_parallel-refinement cd /<>/obj-x86_64-linux-gnu/demo/undocumented/parallel-refinement/cpp && 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-DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_poisson1D.dir/main.cpp.o -c /<>/demo/undocumented/poisson1D/cpp/main.cpp [ 93%] Linking CXX executable demo_nonmatching-projection cd /<>/obj-x86_64-linux-gnu/demo/undocumented/nonmatching-projection/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_nonmatching-projection.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro 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-D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_poisson1D-in-2D.dir/main.cpp.o -c /<>/demo/undocumented/poisson1D-in-2D/cpp/main.cpp [ 94%] Linking CXX executable demo_multimesh-stokes cd /<>/obj-x86_64-linux-gnu/demo/undocumented/multimesh-stokes/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_multimesh-stokes.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/demo_multimesh-stokes.dir/main.cpp.o -o demo_multimesh-stokes ../../../../dolfin/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 94%] Built target demo_multimesh-stokes make -f demo/undocumented/poisson-disc/cpp/CMakeFiles/demo_poisson-disc.dir/build.make demo/undocumented/poisson-disc/cpp/CMakeFiles/demo_poisson-disc.dir/depend make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/demo/undocumented/poisson-disc/cpp /<>/obj-x86_64-linux-gnu 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/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_poisson-disc.dir/main.cpp.o -c /<>/demo/undocumented/poisson-disc/cpp/main.cpp [ 94%] Linking CXX executable demo_parameters cd /<>/obj-x86_64-linux-gnu/demo/undocumented/parameters/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_parameters.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/demo_parameters.dir/main.cpp.o -o demo_parameters ../../../../dolfin/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 94%] Built target demo_parameters make -f demo/undocumented/refinement/cpp/CMakeFiles/demo_refinement.dir/build.make demo/undocumented/refinement/cpp/CMakeFiles/demo_refinement.dir/depend make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/demo/undocumented/refinement/cpp /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/demo/undocumented/refinement/cpp /<>/obj-x86_64-linux-gnu/demo/undocumented/refinement/cpp/CMakeFiles/demo_refinement.dir/DependInfo.cmake --color= Scanning dependencies of target demo_refinement make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f demo/undocumented/refinement/cpp/CMakeFiles/demo_refinement.dir/build.make demo/undocumented/refinement/cpp/CMakeFiles/demo_refinement.dir/build make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 94%] Building CXX object demo/undocumented/refinement/cpp/CMakeFiles/demo_refinement.dir/main.cpp.o cd /<>/obj-x86_64-linux-gnu/demo/undocumented/refinement/cpp && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o 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/usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 94%] Built target demo_poisson1D make -f demo/undocumented/spatial-coordinates/cpp/CMakeFiles/demo_spatial-coordinates.dir/build.make demo/undocumented/spatial-coordinates/cpp/CMakeFiles/demo_spatial-coordinates.dir/depend make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/demo/undocumented/spatial-coordinates/cpp /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/demo/undocumented/spatial-coordinates/cpp /<>/obj-x86_64-linux-gnu/demo/undocumented/spatial-coordinates/cpp/CMakeFiles/demo_spatial-coordinates.dir/DependInfo.cmake --color= Scanning dependencies of target demo_spatial-coordinates make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f demo/undocumented/spatial-coordinates/cpp/CMakeFiles/demo_spatial-coordinates.dir/build.make 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/<>/demo/undocumented/spatial-coordinates/cpp/main.cpp [ 95%] Linking CXX executable demo_poisson1D-in-2D cd /<>/obj-x86_64-linux-gnu/demo/undocumented/poisson1D-in-2D/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_poisson1D-in-2D.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/demo_poisson1D-in-2D.dir/main.cpp.o -o demo_poisson1D-in-2D ../../../../dolfin/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 95%] Built target demo_poisson1D-in-2D make -f demo/undocumented/submesh/cpp/CMakeFiles/demo_submesh.dir/build.make demo/undocumented/submesh/cpp/CMakeFiles/demo_submesh.dir/depend make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/demo/undocumented/submesh/cpp /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/demo/undocumented/submesh/cpp /<>/obj-x86_64-linux-gnu/demo/undocumented/submesh/cpp/CMakeFiles/demo_submesh.dir/DependInfo.cmake --color= Scanning dependencies of target demo_submesh make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f demo/undocumented/submesh/cpp/CMakeFiles/demo_submesh.dir/build.make demo/undocumented/submesh/cpp/CMakeFiles/demo_submesh.dir/build make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 95%] Building CXX object demo/undocumented/submesh/cpp/CMakeFiles/demo_submesh.dir/main.cpp.o cd /<>/obj-x86_64-linux-gnu/demo/undocumented/submesh/cpp && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_submesh.dir/main.cpp.o -c /<>/demo/undocumented/submesh/cpp/main.cpp [ 95%] Linking CXX executable demo_refinement cd /<>/obj-x86_64-linux-gnu/demo/undocumented/refinement/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_refinement.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/demo_refinement.dir/main.cpp.o -o demo_refinement ../../../../dolfin/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 95%] Built target demo_refinement make -f demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/demo_sym-dirichlet-bc.dir/build.make demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/demo_sym-dirichlet-bc.dir/depend make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/demo/undocumented/sym-dirichlet-bc/cpp /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/demo/undocumented/sym-dirichlet-bc/cpp /<>/obj-x86_64-linux-gnu/demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/demo_sym-dirichlet-bc.dir/DependInfo.cmake --color= Scanning dependencies of target demo_sym-dirichlet-bc make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/demo_sym-dirichlet-bc.dir/build.make demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/demo_sym-dirichlet-bc.dir/build make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 95%] Building CXX object demo/undocumented/sym-dirichlet-bc/cpp/CMakeFiles/demo_sym-dirichlet-bc.dir/main.cpp.o cd /<>/obj-x86_64-linux-gnu/demo/undocumented/sym-dirichlet-bc/cpp && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_sym-dirichlet-bc.dir/main.cpp.o -c /<>/demo/undocumented/sym-dirichlet-bc/cpp/main.cpp [ 96%] Linking CXX executable demo_poisson-disc cd /<>/obj-x86_64-linux-gnu/demo/undocumented/poisson-disc/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_poisson-disc.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/demo_poisson-disc.dir/main.cpp.o -o demo_poisson-disc ../../../../dolfin/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 96%] Built target demo_poisson-disc make -f demo/undocumented/time-series/cpp/CMakeFiles/demo_time-series.dir/build.make demo/undocumented/time-series/cpp/CMakeFiles/demo_time-series.dir/depend make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> 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/usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_time-series.dir/main.cpp.o -c /<>/demo/undocumented/time-series/cpp/main.cpp [ 98%] Linking CXX executable demo_submesh cd /<>/obj-x86_64-linux-gnu/demo/undocumented/submesh/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_submesh.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/demo_submesh.dir/main.cpp.o -o demo_submesh ../../../../dolfin/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 98%] Built target demo_submesh make -f demo/undocumented/waveguide/cpp/CMakeFiles/demo_waveguide.dir/build.make demo/undocumented/waveguide/cpp/CMakeFiles/demo_waveguide.dir/depend make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/demo/undocumented/waveguide/cpp /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/demo/undocumented/waveguide/cpp /<>/obj-x86_64-linux-gnu/demo/undocumented/waveguide/cpp/CMakeFiles/demo_waveguide.dir/DependInfo.cmake --color= Scanning dependencies of target demo_waveguide make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f demo/undocumented/waveguide/cpp/CMakeFiles/demo_waveguide.dir/build.make demo/undocumented/waveguide/cpp/CMakeFiles/demo_waveguide.dir/build make[8]: Entering directory '/<>/obj-x86_64-linux-gnu' [ 98%] Building CXX object demo/undocumented/waveguide/cpp/CMakeFiles/demo_waveguide.dir/main.cpp.o cd /<>/obj-x86_64-linux-gnu/demo/undocumented/waveguide/cpp && /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -I/<> -I/<>/dolfin -I/<>/obj-x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -Wno-comment -fpermissive -O2 -g -DNDEBUG -std=c++11 -o CMakeFiles/demo_waveguide.dir/main.cpp.o -c /<>/demo/undocumented/waveguide/cpp/main.cpp [ 98%] Linking CXX executable demo_spatial-coordinates cd /<>/obj-x86_64-linux-gnu/demo/undocumented/spatial-coordinates/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_spatial-coordinates.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/demo_spatial-coordinates.dir/main.cpp.o -o demo_spatial-coordinates ../../../../dolfin/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 98%] Built target demo_spatial-coordinates [ 98%] Linking CXX executable demo_time-series cd /<>/obj-x86_64-linux-gnu/demo/undocumented/time-series/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_time-series.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/demo_time-series.dir/main.cpp.o -o demo_time-series ../../../../dolfin/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 98%] Built target demo_time-series [ 98%] Linking CXX executable demo_sym-dirichlet-bc cd /<>/obj-x86_64-linux-gnu/demo/undocumented/sym-dirichlet-bc/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_sym-dirichlet-bc.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/demo_sym-dirichlet-bc.dir/main.cpp.o -o demo_sym-dirichlet-bc ../../../../dolfin/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 98%] Built target demo_sym-dirichlet-bc [100%] Linking CXX executable demo_waveguide cd /<>/obj-x86_64-linux-gnu/demo/undocumented/waveguide/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_waveguide.dir/link.txt --verbose=1 /usr/bin/c++ -Wno-comment -fpermissive -O2 -g -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/demo_waveguide.dir/main.cpp.o -o demo_waveguide ../../../../dolfin/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so make[8]: Leaving directory '/<>/obj-x86_64-linux-gnu' [100%] Built target demo_waveguide make[7]: Leaving directory '/<>/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /<>/obj-x86_64-linux-gnu/CMakeFiles 0 make[6]: Leaving directory '/<>/obj-x86_64-linux-gnu/demo' make[5]: Leaving directory '/<>/obj-x86_64-linux-gnu' Built target demos make[4]: Leaving directory '/<>/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /<>/obj-x86_64-linux-gnu/CMakeFiles 0 make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' Run C++ unit tests (serial) Test project /<>/obj-x86_64-linux-gnu Start 1: unittests 1/1 Test #1: unittests ........................ Passed 3.09 sec 100% tests passed, 0 tests failed out of 1 Total Test time (real) = 3.16 sec Run C++ regressions tests (serial) Test project /<>/obj-x86_64-linux-gnu Start 3: demo_auto-adaptive-poisson_serial Start 5: demo_bcs_serial Start 7: demo_biharmonic_serial Start 9: demo_built-in-meshes_serial 1/51 Test #9: demo_built-in-meshes_serial ............... Passed 1.14 sec Start 11: demo_cahn-hilliard_serial 2/51 Test #7: demo_biharmonic_serial .................... Passed 1.34 sec Start 13: demo_eigenvalue_serial 3/51 Test #5: demo_bcs_serial ........................... Passed 3.33 sec Start 14: demo_hyperelasticity_serial 4/51 Test #13: demo_eigenvalue_serial .................... Passed 2.05 sec Start 16: demo_mixed-poisson_serial 5/51 Test #16: demo_mixed-poisson_serial ................. Passed 1.48 sec Start 18: demo_navier-stokes_serial 6/51 Test #3: demo_auto-adaptive-poisson_serial ......... Passed 11.13 sec Start 20: demo_neumann-poisson_serial 7/51 Test #20: demo_neumann-poisson_serial ............... Passed 1.15 sec Start 22: demo_nonlinear-poisson_serial 8/51 Test #22: demo_nonlinear-poisson_serial ............. Passed 0.89 sec Start 24: demo_nonmatching-interpolation_serial 9/51 Test #24: demo_nonmatching-interpolation_serial ..... Passed 1.07 sec Start 26: demo_periodic_serial 10/51 Test #26: demo_periodic_serial ...................... Passed 0.97 sec Start 28: demo_poisson_serial 11/51 Test #18: demo_navier-stokes_serial ................. Passed 11.01 sec Start 30: demo_singular-poisson_serial 12/51 Test #28: demo_poisson_serial ....................... Passed 0.97 sec Start 32: demo_stokes-iterative_serial 13/51 Test #30: demo_singular-poisson_serial .............. Passed 1.89 sec Start 34: demo_stokes-taylor-hood_serial 14/51 Test #34: demo_stokes-taylor-hood_serial ............ Passed 5.12 sec Start 36: demo_subdomains_serial 15/51 Test #36: demo_subdomains_serial .................... Passed 1.33 sec Start 38: demo_advection-diffusion_serial 16/51 Test #38: demo_advection-diffusion_serial ........... Passed 3.67 sec Start 40: demo_ale_serial 17/51 Test #40: demo_ale_serial ........................... Passed 1.04 sec Start 42: demo_auto-adaptive-navier-stokes_serial 18/51 Test #42: demo_auto-adaptive-navier-stokes_serial ... Passed 55.57 sec Start 44: demo_block-matrix_serial 19/51 Test #44: demo_block-matrix_serial .................. Passed 1.21 sec Start 46: demo_conditional_serial 20/51 Test #46: demo_conditional_serial ................... Passed 1.82 sec Start 48: demo_contact-vi-snes_serial 21/51 Test #48: demo_contact-vi-snes_serial ............... Passed 1.54 sec Start 50: demo_contact-vi-tao_serial 22/51 Test #50: demo_contact-vi-tao_serial ................ Passed 1.57 sec Start 52: demo_curl-curl_serial 23/51 Test #52: demo_curl-curl_serial ..................... Passed 16.81 sec Start 54: demo_dg-advection-diffusion_serial 24/51 Test #54: demo_dg-advection-diffusion_serial ........ Passed 1.72 sec Start 56: demo_dg-poisson_serial 25/51 Test #56: demo_dg-poisson_serial .................... Passed 0.84 sec Start 58: demo_elasticity_serial 26/51 Test #58: demo_elasticity_serial .................... Passed 17.12 sec Start 60: demo_elastodynamics_serial 27/51 Test #32: demo_stokes-iterative_serial .............. Passed 164.12 sec Start 62: demo_eval_serial 28/51 Test #62: demo_eval_serial .......................... Passed 4.45 sec Start 64: demo_extrapolation_serial 29/51 Test #64: demo_extrapolation_serial ................. Passed 0.85 sec Start 66: demo_functional_serial 30/51 Test #66: demo_functional_serial .................... Passed 0.90 sec Start 68: demo_gmg-poisson_serial 31/51 Test #68: demo_gmg-poisson_serial ................... Passed 1.28 sec Start 70: demo_lift-drag_serial 32/51 Test #70: demo_lift-drag_serial ..................... Passed 0.71 sec Start 72: demo_mesh-quality_serial 33/51 Test #72: demo_mesh-quality_serial .................. Passed 0.74 sec Start 74: demo_meshfunction-refinement_serial 34/51 Test #74: demo_meshfunction-refinement_serial ....... Passed 0.66 sec Start 76: demo_multimesh-poisson_serial 35/51 Test #76: demo_multimesh-poisson_serial ............. Passed 6.24 sec Start 78: demo_multimesh-stokes_serial 36/51 Test #60: demo_elastodynamics_serial ................ Passed 69.70 sec Start 80: demo_nonmatching-projection_serial 37/51 Test #78: demo_multimesh-stokes_serial .............. Passed 1.76 sec Start 82: demo_parallel-refinement_serial 38/51 Test #80: demo_nonmatching-projection_serial ........ Passed 1.79 sec Start 84: demo_parameters_serial 39/51 Test #82: demo_parallel-refinement_serial ........... Passed 1.14 sec Start 86: demo_poisson1D_serial 40/51 Test #84: demo_parameters_serial .................... Passed 0.86 sec Start 88: demo_poisson1D-in-2D_serial 41/51 Test #86: demo_poisson1D_serial ..................... Passed 0.86 sec Start 90: demo_poisson-disc_serial 42/51 Test #88: demo_poisson1D-in-2D_serial ............... Passed 0.63 sec Start 92: demo_refinement_serial 43/51 Test #90: demo_poisson-disc_serial .................. Passed 1.50 sec Start 94: demo_spatial-coordinates_serial 44/51 Test #92: demo_refinement_serial .................... Passed 1.13 sec Start 96: demo_submesh_serial 45/51 Test #94: demo_spatial-coordinates_serial ........... Passed 0.99 sec Start 98: demo_sym-dirichlet-bc_serial 46/51 Test #96: demo_submesh_serial ....................... Passed 0.96 sec Start 100: demo_time-series_serial 47/51 Test #100: demo_time-series_serial ................... Passed 0.74 sec Start 102: demo_waveguide_serial 48/51 Test #102: demo_waveguide_serial ..................... Passed 1.36 sec 49/51 Test #98: demo_sym-dirichlet-bc_serial .............. Passed 8.65 sec 50/51 Test #14: demo_hyperelasticity_serial ............... Passed 318.44 sec 51/51 Test #11: demo_cahn-hilliard_serial ................. Passed 357.02 sec 100% tests passed, 0 tests failed out of 51 Total Test time (real) = 358.35 sec Run C++ regression tests (MPI) Test project /<>/obj-x86_64-linux-gnu Start 2: demo_auto-adaptive-poisson_mpi Start 4: demo_bcs_mpi 1/50 Test #2: demo_auto-adaptive-poisson_mpi ......... Passed 1.25 sec Start 6: demo_biharmonic_mpi 2/50 Test #6: demo_biharmonic_mpi .................... Passed 14.80 sec Start 8: demo_built-in-meshes_mpi 3/50 Test #4: demo_bcs_mpi ........................... Passed 22.32 sec Start 10: demo_cahn-hilliard_mpi 4/50 Test #8: demo_built-in-meshes_mpi ............... Passed 19.12 sec Start 12: demo_eigenvalue_mpi 5/50 Test #12: demo_eigenvalue_mpi .................... Passed 18.53 sec Start 15: demo_mixed-poisson_mpi 6/50 Test #15: demo_mixed-poisson_mpi ................. Passed 14.09 sec Start 17: demo_navier-stokes_mpi 7/50 Test #17: demo_navier-stokes_mpi ................. Passed 405.22 sec Start 19: demo_neumann-poisson_mpi 8/50 Test #19: demo_neumann-poisson_mpi ............... Passed 11.62 sec Start 21: demo_nonlinear-poisson_mpi 9/50 Test #21: demo_nonlinear-poisson_mpi ............. Passed 5.84 sec Start 23: demo_nonmatching-interpolation_mpi 10/50 Test #23: demo_nonmatching-interpolation_mpi ..... Passed 1.42 sec Start 25: demo_periodic_mpi 11/50 Test #25: demo_periodic_mpi ...................... Passed 8.88 sec Start 27: demo_poisson_mpi 12/50 Test #27: demo_poisson_mpi ....................... Passed 10.27 sec Start 29: demo_singular-poisson_mpi 13/50 Test #29: demo_singular-poisson_mpi .............. Passed 44.89 sec Start 31: demo_stokes-iterative_mpi 14/50 Test #31: demo_stokes-iterative_mpi .............. Passed 271.26 sec Start 33: demo_stokes-taylor-hood_mpi 15/50 Test #33: demo_stokes-taylor-hood_mpi ............ Passed 23.02 sec Start 35: demo_subdomains_mpi 16/50 Test #35: demo_subdomains_mpi .................... Passed 1.44 sec Start 37: demo_advection-diffusion_mpi 17/50 Test #37: demo_advection-diffusion_mpi ........... Passed 47.91 sec Start 39: demo_ale_mpi 18/50 Test #39: demo_ale_mpi ........................... Passed 6.93 sec Start 41: demo_auto-adaptive-navier-stokes_mpi 19/50 Test #41: demo_auto-adaptive-navier-stokes_mpi ... Passed 1.18 sec Start 43: demo_block-matrix_mpi 20/50 Test #43: demo_block-matrix_mpi .................. Passed 2.19 sec Start 45: demo_conditional_mpi 21/50 Test #45: demo_conditional_mpi ................... Passed 15.24 sec Start 47: demo_contact-vi-snes_mpi 22/50 Test #47: demo_contact-vi-snes_mpi ............... Passed 29.91 sec Start 49: demo_contact-vi-tao_mpi 23/50 Test #49: demo_contact-vi-tao_mpi ................ Passed 9.51 sec Start 51: demo_curl-curl_mpi 24/50 Test #51: demo_curl-curl_mpi ..................... Passed 79.04 sec Start 53: demo_dg-advection-diffusion_mpi 25/50 Test #53: demo_dg-advection-diffusion_mpi ........ Passed 19.74 sec Start 55: demo_dg-poisson_mpi 26/50 Test #55: demo_dg-poisson_mpi .................... Passed 15.19 sec Start 57: demo_elasticity_mpi 27/50 Test #10: demo_cahn-hilliard_mpi ................. Passed 1100.22 sec Start 59: demo_elastodynamics_mpi 28/50 Test #57: demo_elasticity_mpi .................... Passed 64.82 sec Start 61: demo_eval_mpi 29/50 Test #61: demo_eval_mpi .......................... Passed 1.13 sec Start 63: demo_extrapolation_mpi 30/50 Test #63: demo_extrapolation_mpi ................. Passed 1.11 sec Start 65: demo_functional_mpi 31/50 Test #65: demo_functional_mpi .................... Passed 1.77 sec Start 67: demo_gmg-poisson_mpi 32/50 Test #67: demo_gmg-poisson_mpi ................... Passed 12.22 sec Start 69: demo_lift-drag_mpi 33/50 Test #69: demo_lift-drag_mpi ..................... Passed 7.01 sec Start 71: demo_mesh-quality_mpi 34/50 Test #71: demo_mesh-quality_mpi .................. Passed 10.02 sec Start 73: demo_meshfunction-refinement_mpi 35/50 Test #73: demo_meshfunction-refinement_mpi ....... Passed 1.38 sec Start 75: demo_multimesh-poisson_mpi 36/50 Test #75: demo_multimesh-poisson_mpi ............. Passed 1.26 sec Start 77: demo_multimesh-stokes_mpi 37/50 Test #77: demo_multimesh-stokes_mpi .............. Passed 1.54 sec Start 79: demo_nonmatching-projection_mpi 38/50 Test #79: demo_nonmatching-projection_mpi ........ Passed 1.54 sec Start 81: demo_parallel-refinement_mpi 39/50 Test #81: demo_parallel-refinement_mpi ........... Passed 4.94 sec Start 83: demo_parameters_mpi 40/50 Test #83: demo_parameters_mpi .................... Passed 1.91 sec Start 85: demo_poisson1D_mpi 41/50 Test #85: demo_poisson1D_mpi ..................... Passed 9.09 sec Start 87: demo_poisson1D-in-2D_mpi 42/50 Test #87: demo_poisson1D-in-2D_mpi ............... Passed 1.24 sec Start 89: demo_poisson-disc_mpi 43/50 Test #89: demo_poisson-disc_mpi .................. Passed 1.42 sec Start 91: demo_refinement_mpi 44/50 Test #91: demo_refinement_mpi .................... Passed 18.43 sec Start 93: demo_spatial-coordinates_mpi 45/50 Test #93: demo_spatial-coordinates_mpi ........... Passed 13.45 sec Start 95: demo_submesh_mpi 46/50 Test #95: demo_submesh_mpi ....................... Passed 1.40 sec Start 97: demo_sym-dirichlet-bc_mpi 47/50 Test #97: demo_sym-dirichlet-bc_mpi .............. Passed 67.53 sec Start 99: demo_time-series_mpi 48/50 Test #99: demo_time-series_mpi ................... Passed 1.80 sec Start 101: demo_waveguide_mpi 49/50 Test #101: demo_waveguide_mpi ..................... Passed 3.54 sec 50/50 Test #59: demo_elastodynamics_mpi ................ Passed 534.54 sec 100% tests passed, 0 tests failed out of 50 Total Test time (real) = 1657.16 sec make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary py3versions: no X-Python3-Version in control file, using supported versions dh binary --buildsystem=cmake --with python3 dh_testroot -O--buildsystem=cmake dh_prep -O--buildsystem=cmake debian/rules override_dh_auto_install make[1]: Entering directory '/<>' py3versions: no X-Python3-Version in control file, using supported versions dh_auto_install cd obj-x86_64-linux-gnu && make -j4 install DESTDIR=/<>/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/<>/obj-x86_64-linux-gnu' /usr/bin/cmake -S/<> -B/<>/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/obj-x86_64-linux-gnu/CMakeFiles /<>/obj-x86_64-linux-gnu/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' make -f dolfin/ale/CMakeFiles/compile_ale_forms.dir/build.make dolfin/ale/CMakeFiles/compile_ale_forms.dir/depend make[4]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/dolfin/ale /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/dolfin/ale /<>/obj-x86_64-linux-gnu/dolfin/ale/CMakeFiles/compile_ale_forms.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f dolfin/ale/CMakeFiles/compile_ale_forms.dir/build.make dolfin/ale/CMakeFiles/compile_ale_forms.dir/build make[4]: Entering directory '/<>/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'dolfin/ale/CMakeFiles/compile_ale_forms.dir/build'. make[4]: Leaving directory '/<>/obj-x86_64-linux-gnu' [ 0%] Built target compile_ale_forms make -f dolfin/CMakeFiles/dolfin.dir/build.make dolfin/CMakeFiles/dolfin.dir/depend make[4]: Entering directory '/<>/obj-x86_64-linux-gnu' cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/dolfin /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/dolfin /<>/obj-x86_64-linux-gnu/dolfin/CMakeFiles/dolfin.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/obj-x86_64-linux-gnu' make -f dolfin/CMakeFiles/dolfin.dir/build.make dolfin/CMakeFiles/dolfin.dir/build make[4]: Entering directory '/<>/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'dolfin/CMakeFiles/dolfin.dir/build'. make[4]: Leaving directory '/<>/obj-x86_64-linux-gnu' [100%] Built target dolfin make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /<>/obj-x86_64-linux-gnu/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory '/<>/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'preinstall'. make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "RelWithDebInfo" -- Installing: /<>/debian/tmp/usr/bin/dolfin-convert -- Installing: /<>/debian/tmp/usr/bin/dolfin-order -- Installing: /<>/debian/tmp/usr/bin/dolfin-plot -- Installing: /<>/debian/tmp/usr/share/dolfin/dolfin.conf -- Installing: /<>/debian/tmp/usr/bin/dolfin-version -- Installing: /<>/debian/tmp/usr/bin/fenics-version -- Installing: /<>/debian/tmp/usr/bin/dolfin-get-demos -- Installing: /<>/debian/tmp/usr/share/dolfin/demo -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/stokes-iterative -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/stokes-iterative/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/stokes-iterative/cpp/StokesPreconditioner.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/stokes-iterative/cpp/Stokes.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/stokes-iterative/cpp/StokesPreconditioner.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/stokes-iterative/cpp/Stokes.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/stokes-iterative/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/stokes-iterative/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/hyperelasticity -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/hyperelasticity/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/hyperelasticity/cpp/HyperElasticity.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/hyperelasticity/cpp/HyperElasticity.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/hyperelasticity/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/hyperelasticity/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/eigenvalue -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/eigenvalue/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/eigenvalue/cpp/StiffnessMatrix.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/eigenvalue/cpp/StiffnessMatrix.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/eigenvalue/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/eigenvalue/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/eigenvalue/box_with_dent.xml.gz -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/navier-stokes -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/navier-stokes/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/navier-stokes/cpp/TentativeVelocity.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/navier-stokes/cpp/PressureUpdate.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/navier-stokes/cpp/PressureUpdate.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/navier-stokes/cpp/TentativeVelocity.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/navier-stokes/cpp/VelocityUpdate.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/navier-stokes/cpp/VelocityUpdate.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/navier-stokes/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/navier-stokes/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/navier-stokes/lshape.xml.gz -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/subdomains -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/subdomains/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/subdomains/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/subdomains/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/subdomains/dolfin_fine.xml.gz -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/bcs -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/bcs/python -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/bcs/python/demo_bcs.py -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/bcs/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/bcs/cpp/Poisson.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/bcs/cpp/Poisson.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/bcs/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/bcs/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/bcs/aneurysm.xml.gz -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/nonlinear-poisson -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/nonlinear-poisson/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/nonlinear-poisson/cpp/NonlinearPoisson.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/nonlinear-poisson/cpp/plot.py -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/nonlinear-poisson/cpp/NonlinearPoisson.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/nonlinear-poisson/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/nonlinear-poisson/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/auto-adaptive-poisson -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/auto-adaptive-poisson/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/auto-adaptive-poisson/cpp/AdaptivePoisson.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/auto-adaptive-poisson/cpp/AdaptivePoisson.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/auto-adaptive-poisson/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/auto-adaptive-poisson/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/neumann-poisson -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/neumann-poisson/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/neumann-poisson/cpp/Poisson.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/neumann-poisson/cpp/Poisson.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/neumann-poisson/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/neumann-poisson/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/singular-poisson -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/singular-poisson/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/singular-poisson/cpp/Poisson.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/singular-poisson/cpp/Poisson.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/singular-poisson/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/singular-poisson/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/biharmonic -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/biharmonic/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/biharmonic/cpp/Biharmonic.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/biharmonic/cpp/Biharmonic.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/biharmonic/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/biharmonic/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/stokes-taylor-hood -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/stokes-taylor-hood/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/stokes-taylor-hood/cpp/Stokes.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/stokes-taylor-hood/cpp/plot.py -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/stokes-taylor-hood/cpp/Stokes.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/stokes-taylor-hood/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/stokes-taylor-hood/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/stokes-taylor-hood/dolfin_fine.xml.gz -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/stokes-taylor-hood/dolfin_fine_subdomains.xml.gz -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/mixed-poisson -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/mixed-poisson/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/mixed-poisson/cpp/MixedPoisson.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/mixed-poisson/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/mixed-poisson/cpp/MixedPoisson.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/mixed-poisson/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/poisson -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/poisson/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/poisson/cpp/Poisson.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/poisson/cpp/Poisson.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/poisson/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/poisson/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/cahn-hilliard -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/cahn-hilliard/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/cahn-hilliard/cpp/CahnHilliard2D.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/cahn-hilliard/cpp/CahnHilliard2D.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/cahn-hilliard/cpp/CahnHilliard2D.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/cahn-hilliard/cpp/CahnHilliard3D.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/cahn-hilliard/cpp/CahnHilliard3D.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/cahn-hilliard/cpp/CahnHilliard3D.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/cahn-hilliard/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/cahn-hilliard/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/periodic -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/periodic/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/periodic/cpp/Poisson.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/periodic/cpp/Poisson.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/periodic/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/periodic/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/nonmatching-interpolation -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/nonmatching-interpolation/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/nonmatching-interpolation/cpp/P3.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/nonmatching-interpolation/cpp/P1.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/nonmatching-interpolation/cpp/P1.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/nonmatching-interpolation/cpp/P3.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/nonmatching-interpolation/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/nonmatching-interpolation/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/built-in-meshes -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/built-in-meshes/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/built-in-meshes/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/documented/built-in-meshes/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/contact-vi-snes -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/contact-vi-snes/circle_yplane.xml.gz -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/contact-vi-snes/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/contact-vi-snes/cpp/HyperElasticity.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/contact-vi-snes/cpp/HyperElasticity.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/contact-vi-snes/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/contact-vi-snes/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/lift-drag -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/lift-drag/dolfin_fine_pressure.xml.gz -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/lift-drag/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/lift-drag/cpp/Functionals.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/lift-drag/cpp/Functionals.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/lift-drag/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/lift-drag/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/lift-drag/dolfin_fine.xml.gz -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/multimesh-3d -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/multimesh-3d/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/multimesh-3d/cpp/MultiMeshL2Norm.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/multimesh-3d/cpp/MultiMeshH10Norm.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/multimesh-3d/cpp/MultiMeshL2Norm.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/multimesh-3d/cpp/MultiMeshPoisson.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/multimesh-3d/cpp/MultiMeshH10Norm.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/multimesh-3d/cpp/MultiMeshPoisson.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/multimesh-3d/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/multimesh-3d/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/meshfunction-refinement -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/meshfunction-refinement/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/meshfunction-refinement/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/meshfunction-refinement/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/parameters -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/parameters/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/parameters/cpp/parameters.xml -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/parameters/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/parameters/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/waveguide -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/waveguide/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/waveguide/cpp/Forms.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/waveguide/cpp/Forms.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/waveguide/cpp/Forms.py -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/waveguide/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/waveguide/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/dg-poisson -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/dg-poisson/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/dg-poisson/cpp/Poisson.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/dg-poisson/cpp/plot.py -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/dg-poisson/cpp/Poisson.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/dg-poisson/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/dg-poisson/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/elasticity -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/elasticity/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/elasticity/cpp/Elasticity.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/elasticity/cpp/Elasticity.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/elasticity/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/elasticity/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/ale -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/ale/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/ale/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/ale/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/parallel-refinement -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/parallel-refinement/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/parallel-refinement/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/parallel-refinement/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/time-series -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/time-series/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/time-series/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/time-series/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/contact-vi-tao -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/contact-vi-tao/circle_yplane.xml.gz -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/contact-vi-tao/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/contact-vi-tao/cpp/Elasticity.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/contact-vi-tao/cpp/Elasticity.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/contact-vi-tao/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/contact-vi-tao/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/sym-dirichlet-bc -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/sym-dirichlet-bc/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/sym-dirichlet-bc/cpp/Poisson.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/sym-dirichlet-bc/cpp/Poisson.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/sym-dirichlet-bc/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/sym-dirichlet-bc/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/elastodynamics -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/elastodynamics/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/elastodynamics/cpp/ElastoDynamics.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/elastodynamics/cpp/DG0_eps_xx.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/elastodynamics/cpp/DG0_eps_xx.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/elastodynamics/cpp/ElastoDynamics.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/elastodynamics/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/elastodynamics/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/elastodynamics/dolfin_fine.xml.gz -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/extrapolation -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/extrapolation/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/extrapolation/cpp/P1.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/extrapolation/cpp/P2.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/extrapolation/cpp/P2.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/extrapolation/cpp/P1.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/extrapolation/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/extrapolation/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/dg-advection-diffusion -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/dg-advection-diffusion/unitsquare_64_64.xml.gz -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/dg-advection-diffusion/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/dg-advection-diffusion/cpp/AdvectionDiffusion.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/dg-advection-diffusion/cpp/Projection.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/dg-advection-diffusion/cpp/Velocity.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/dg-advection-diffusion/cpp/AdvectionDiffusion.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/dg-advection-diffusion/cpp/Velocity.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/dg-advection-diffusion/cpp/Projection.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/dg-advection-diffusion/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/dg-advection-diffusion/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/dg-advection-diffusion/unitsquare_64_64_velocity.xml.gz -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/submesh -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/submesh/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/submesh/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/submesh/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/advection-diffusion -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/advection-diffusion/dolfin_fine_velocity.xml.gz -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/advection-diffusion/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/advection-diffusion/cpp/AdvectionDiffusion.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/advection-diffusion/cpp/Velocity.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/advection-diffusion/cpp/AdvectionDiffusion.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/advection-diffusion/cpp/Velocity.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/advection-diffusion/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/advection-diffusion/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/advection-diffusion/dolfin_fine.xml.gz -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/advection-diffusion/dolfin_fine_subdomains.xml.gz -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/eval -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/eval/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/eval/cpp/Projection.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/eval/cpp/Projection.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/eval/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/eval/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/poisson1D -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/poisson1D/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/poisson1D/cpp/Poisson.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/poisson1D/cpp/Poisson.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/poisson1D/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/poisson1D/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/auto-adaptive-navier-stokes -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/auto-adaptive-navier-stokes/channel_with_flap.xml.gz -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/auto-adaptive-navier-stokes/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/auto-adaptive-navier-stokes/cpp/AdaptiveNavierStokes.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/auto-adaptive-navier-stokes/cpp/AdaptiveNavierStokes.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/auto-adaptive-navier-stokes/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/auto-adaptive-navier-stokes/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/multimesh-stokes -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/multimesh-stokes/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/multimesh-stokes/cpp/MultiMeshStokes.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/multimesh-stokes/cpp/MultiMeshStokes.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/multimesh-stokes/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/multimesh-stokes/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/mesh-quality -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/mesh-quality/python -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/mesh-quality/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/mesh-quality/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/mesh-quality/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/mesh-quality/dolfin_fine.xml.gz -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/curl-curl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/curl-curl/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/curl-curl/cpp/EddyCurrents.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/curl-curl/cpp/CurrentDensity.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/curl-curl/cpp/P1Space.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/curl-curl/cpp/P1Space.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/curl-curl/cpp/EddyCurrents.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/curl-curl/cpp/CurrentDensity.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/curl-curl/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/curl-curl/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/curl-curl/sphere.xml.gz -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/gmg-poisson -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/gmg-poisson/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/gmg-poisson/cpp/Poisson.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/gmg-poisson/cpp/Poisson.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/gmg-poisson/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/gmg-poisson/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/multimesh-poisson -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/multimesh-poisson/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/multimesh-poisson/cpp/P1.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/multimesh-poisson/cpp/P1.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/multimesh-poisson/cpp/MultiMeshPoisson.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/multimesh-poisson/cpp/MultiMeshPoisson.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/multimesh-poisson/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/multimesh-poisson/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/block-matrix -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/block-matrix/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/block-matrix/cpp/StiffnessMatrix.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/block-matrix/cpp/StiffnessMatrix.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/block-matrix/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/block-matrix/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/conditional -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/conditional/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/conditional/cpp/Conditional.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/conditional/cpp/Conditional.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/conditional/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/conditional/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/functional -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/functional/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/functional/cpp/EnergyNorm.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/functional/cpp/EnergyNorm.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/functional/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/functional/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/refinement -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/refinement/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/refinement/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/refinement/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/poisson1D-in-2D -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/poisson1D-in-2D/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/poisson1D-in-2D/cpp/Poisson.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/poisson1D-in-2D/cpp/Poisson.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/poisson1D-in-2D/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/poisson1D-in-2D/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/nonmatching-projection -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/nonmatching-projection/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/nonmatching-projection/cpp/P3.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/nonmatching-projection/cpp/P1_projection.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/nonmatching-projection/cpp/P1_projection.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/nonmatching-projection/cpp/P3.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/nonmatching-projection/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/nonmatching-projection/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/spatial-coordinates -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/spatial-coordinates/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/spatial-coordinates/cpp/SpatialCoordinates.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/spatial-coordinates/cpp/SpatialCoordinates.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/spatial-coordinates/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/spatial-coordinates/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/poisson-disc -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/poisson-disc/cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/poisson-disc/cpp/PoissonDisc.ufl -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/poisson-disc/cpp/PoissonDisc.h -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/poisson-disc/cpp/main.cpp -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/undocumented/poisson-disc/cpp/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/demo/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/share/dolfin/data -- Installing: /<>/debian/tmp/usr/share/dolfin/data/README -- Installing: /<>/debian/tmp/usr/include/dolfin.h -- Installing: /<>/debian/tmp/usr/include/dolfin/common/version.h -- Installing: /<>/debian/tmp/usr/include/dolfin/adaptivity/adapt.h -- Installing: /<>/debian/tmp/usr/include/dolfin/adaptivity/AdaptiveLinearVariationalSolver.h -- Installing: /<>/debian/tmp/usr/include/dolfin/adaptivity/AdaptiveNonlinearVariationalSolver.h -- Installing: /<>/debian/tmp/usr/include/dolfin/adaptivity/adaptivesolve.h -- Installing: /<>/debian/tmp/usr/include/dolfin/adaptivity/dolfin_adaptivity.h -- Installing: /<>/debian/tmp/usr/include/dolfin/adaptivity/ErrorControl.h -- Installing: /<>/debian/tmp/usr/include/dolfin/adaptivity/Extrapolation.h -- Installing: /<>/debian/tmp/usr/include/dolfin/adaptivity/GenericAdaptiveVariationalSolver.h -- Installing: /<>/debian/tmp/usr/include/dolfin/adaptivity/GoalFunctional.h -- Installing: /<>/debian/tmp/usr/include/dolfin/adaptivity/marking.h -- Installing: /<>/debian/tmp/usr/include/dolfin/adaptivity/TimeSeries.h -- Installing: /<>/debian/tmp/usr/include/dolfin/ale/ALE.h -- Installing: /<>/debian/tmp/usr/include/dolfin/ale/dolfin_ale.h -- Installing: /<>/debian/tmp/usr/include/dolfin/ale/HarmonicSmoothing.h -- Installing: /<>/debian/tmp/usr/include/dolfin/ale/MeshDisplacement.h -- Installing: /<>/debian/tmp/usr/include/dolfin/common/Array.h -- Installing: /<>/debian/tmp/usr/include/dolfin/common/ArrayView.h -- Installing: /<>/debian/tmp/usr/include/dolfin/common/constants.h -- Installing: /<>/debian/tmp/usr/include/dolfin/common/defines.h -- Installing: /<>/debian/tmp/usr/include/dolfin/common/dolfin_common.h -- Installing: /<>/debian/tmp/usr/include/dolfin/common/dolfin_doc.h -- Installing: /<>/debian/tmp/usr/include/dolfin/common/Hierarchical.h -- Installing: /<>/debian/tmp/usr/include/dolfin/common/IndexSet.h -- Installing: /<>/debian/tmp/usr/include/dolfin/common/init.h -- Installing: /<>/debian/tmp/usr/include/dolfin/common/MPI.h -- Installing: /<>/debian/tmp/usr/include/dolfin/common/NoDeleter.h -- Installing: /<>/debian/tmp/usr/include/dolfin/common/RangedIndexSet.h -- Installing: /<>/debian/tmp/usr/include/dolfin/common/Set.h -- Installing: /<>/debian/tmp/usr/include/dolfin/common/SubSystemsManager.h -- Installing: /<>/debian/tmp/usr/include/dolfin/common/Timer.h -- Installing: /<>/debian/tmp/usr/include/dolfin/common/timing.h -- Installing: /<>/debian/tmp/usr/include/dolfin/common/types.h -- Installing: /<>/debian/tmp/usr/include/dolfin/common/UniqueIdGenerator.h -- Installing: /<>/debian/tmp/usr/include/dolfin/common/utils.h -- Installing: /<>/debian/tmp/usr/include/dolfin/common/Variable.h -- Installing: /<>/debian/tmp/usr/include/dolfin/fem/assemble.h -- Installing: /<>/debian/tmp/usr/include/dolfin/fem/assemble_local.h -- Installing: /<>/debian/tmp/usr/include/dolfin/fem/AssemblerBase.h -- Installing: /<>/debian/tmp/usr/include/dolfin/fem/Assembler.h -- Installing: /<>/debian/tmp/usr/include/dolfin/fem/BasisFunction.h -- Installing: /<>/debian/tmp/usr/include/dolfin/fem/DirichletBC.h -- Installing: /<>/debian/tmp/usr/include/dolfin/fem/DiscreteOperators.h -- Installing: /<>/debian/tmp/usr/include/dolfin/fem/DofMapBuilder.h -- Installing: /<>/debian/tmp/usr/include/dolfin/fem/DofMap.h -- Installing: /<>/debian/tmp/usr/include/dolfin/fem/dolfin_fem.h -- Installing: /<>/debian/tmp/usr/include/dolfin/fem/Equation.h -- Installing: /<>/debian/tmp/usr/include/dolfin/fem/fem_utils.h -- Installing: /<>/debian/tmp/usr/include/dolfin/fem/FiniteElement.h -- Installing: /<>/debian/tmp/usr/include/dolfin/fem/Form.h -- Installing: /<>/debian/tmp/usr/include/dolfin/fem/GenericDofMap.h -- Installing: /<>/debian/tmp/usr/include/dolfin/fem/LinearTimeDependentProblem.h -- Installing: /<>/debian/tmp/usr/include/dolfin/fem/LinearVariationalProblem.h -- Installing: /<>/debian/tmp/usr/include/dolfin/fem/LinearVariationalSolver.h -- Installing: /<>/debian/tmp/usr/include/dolfin/fem/LocalAssembler.h -- Installing: /<>/debian/tmp/usr/include/dolfin/fem/LocalSolver.h -- Installing: /<>/debian/tmp/usr/include/dolfin/fem/MultiMeshAssembler.h -- Installing: /<>/debian/tmp/usr/include/dolfin/fem/MultiMeshDirichletBC.h -- Installing: /<>/debian/tmp/usr/include/dolfin/fem/MultiMeshDofMap.h -- Installing: /<>/debian/tmp/usr/include/dolfin/fem/MultiMeshForm.h -- Installing: /<>/debian/tmp/usr/include/dolfin/fem/NonlinearVariationalProblem.h -- Installing: /<>/debian/tmp/usr/include/dolfin/fem/NonlinearVariationalSolver.h -- Installing: /<>/debian/tmp/usr/include/dolfin/fem/PETScDMCollection.h -- Installing: /<>/debian/tmp/usr/include/dolfin/fem/PointSource.h -- Installing: /<>/debian/tmp/usr/include/dolfin/fem/solve.h -- Installing: /<>/debian/tmp/usr/include/dolfin/fem/SparsityPatternBuilder.h -- Installing: /<>/debian/tmp/usr/include/dolfin/fem/SystemAssembler.h -- Installing: /<>/debian/tmp/usr/include/dolfin/fem/UFC.h -- Installing: /<>/debian/tmp/usr/include/dolfin/function/assign.h -- Installing: /<>/debian/tmp/usr/include/dolfin/function/CoefficientAssigner.h -- Installing: /<>/debian/tmp/usr/include/dolfin/function/Constant.h -- Installing: /<>/debian/tmp/usr/include/dolfin/function/dolfin_function.h -- Installing: /<>/debian/tmp/usr/include/dolfin/function/Expression.h -- Installing: /<>/debian/tmp/usr/include/dolfin/function/FunctionAssigner.h -- Installing: /<>/debian/tmp/usr/include/dolfin/function/FunctionAXPY.h -- Installing: /<>/debian/tmp/usr/include/dolfin/function/Function.h -- Installing: /<>/debian/tmp/usr/include/dolfin/function/FunctionSpace.h -- Installing: /<>/debian/tmp/usr/include/dolfin/function/GenericFunction.h -- Installing: /<>/debian/tmp/usr/include/dolfin/function/LagrangeInterpolator.h -- Installing: /<>/debian/tmp/usr/include/dolfin/function/MultiMeshCoefficientAssigner.h -- Installing: /<>/debian/tmp/usr/include/dolfin/function/MultiMeshFunction.h -- Installing: /<>/debian/tmp/usr/include/dolfin/function/MultiMeshFunctionSpace.h -- Installing: /<>/debian/tmp/usr/include/dolfin/function/MultiMeshSubSpace.h -- Installing: /<>/debian/tmp/usr/include/dolfin/function/SpecialFacetFunction.h -- Installing: /<>/debian/tmp/usr/include/dolfin/function/SpecialFunctions.h -- Installing: /<>/debian/tmp/usr/include/dolfin/generation/BoxMesh.h -- Installing: /<>/debian/tmp/usr/include/dolfin/generation/dolfin_generation.h -- Installing: /<>/debian/tmp/usr/include/dolfin/generation/IntervalMesh.h -- Installing: /<>/debian/tmp/usr/include/dolfin/generation/RectangleMesh.h -- Installing: /<>/debian/tmp/usr/include/dolfin/generation/SphericalShellMesh.h -- Installing: /<>/debian/tmp/usr/include/dolfin/generation/UnitCubeMesh.h -- Installing: /<>/debian/tmp/usr/include/dolfin/generation/UnitDiscMesh.h -- Installing: /<>/debian/tmp/usr/include/dolfin/generation/UnitIntervalMesh.h -- Installing: /<>/debian/tmp/usr/include/dolfin/generation/UnitSquareMesh.h -- Installing: /<>/debian/tmp/usr/include/dolfin/generation/UnitTetrahedronMesh.h -- Installing: /<>/debian/tmp/usr/include/dolfin/generation/UnitTriangleMesh.h -- Installing: /<>/debian/tmp/usr/include/dolfin/geometry/BoundingBoxTree1D.h -- Installing: /<>/debian/tmp/usr/include/dolfin/geometry/BoundingBoxTree2D.h -- Installing: /<>/debian/tmp/usr/include/dolfin/geometry/BoundingBoxTree3D.h -- Installing: /<>/debian/tmp/usr/include/dolfin/geometry/BoundingBoxTree.h -- Installing: /<>/debian/tmp/usr/include/dolfin/geometry/CGALExactArithmetic.h -- Installing: /<>/debian/tmp/usr/include/dolfin/geometry/CollisionPredicates.h -- Installing: /<>/debian/tmp/usr/include/dolfin/geometry/ConvexTriangulation.h -- Installing: /<>/debian/tmp/usr/include/dolfin/geometry/dolfin_geometry.h -- Installing: /<>/debian/tmp/usr/include/dolfin/geometry/GenericBoundingBoxTree.h -- Installing: /<>/debian/tmp/usr/include/dolfin/geometry/GeometryDebugging.h -- Installing: /<>/debian/tmp/usr/include/dolfin/geometry/GeometryPredicates.h -- Installing: /<>/debian/tmp/usr/include/dolfin/geometry/intersect.h -- Installing: /<>/debian/tmp/usr/include/dolfin/geometry/IntersectionConstruction.h -- Installing: /<>/debian/tmp/usr/include/dolfin/geometry/MeshPointIntersection.h -- Installing: /<>/debian/tmp/usr/include/dolfin/geometry/Point.h -- Installing: /<>/debian/tmp/usr/include/dolfin/geometry/predicates.h -- Installing: /<>/debian/tmp/usr/include/dolfin/geometry/SimplexQuadrature.h -- Installing: /<>/debian/tmp/usr/include/dolfin/graph/BoostGraphColoring.h -- Installing: /<>/debian/tmp/usr/include/dolfin/graph/BoostGraphOrdering.h -- Installing: /<>/debian/tmp/usr/include/dolfin/graph/CSRGraph.h -- Installing: /<>/debian/tmp/usr/include/dolfin/graph/dolfin_graph.h -- Installing: /<>/debian/tmp/usr/include/dolfin/graph/GraphBuilder.h -- Installing: /<>/debian/tmp/usr/include/dolfin/graph/GraphColoring.h -- Installing: /<>/debian/tmp/usr/include/dolfin/graph/Graph.h -- Installing: /<>/debian/tmp/usr/include/dolfin/graph/ParMETIS.h -- Installing: /<>/debian/tmp/usr/include/dolfin/graph/SCOTCH.h -- Installing: /<>/debian/tmp/usr/include/dolfin/graph/ZoltanInterface.h -- Installing: /<>/debian/tmp/usr/include/dolfin/io/base64.h -- Installing: /<>/debian/tmp/usr/include/dolfin/io/dolfin_io.h -- Installing: /<>/debian/tmp/usr/include/dolfin/io/Encoder.h -- Installing: /<>/debian/tmp/usr/include/dolfin/io/File.h -- Installing: /<>/debian/tmp/usr/include/dolfin/io/GenericFile.h -- Installing: /<>/debian/tmp/usr/include/dolfin/io/HDF5Attribute.h -- Installing: /<>/debian/tmp/usr/include/dolfin/io/HDF5File.h -- Installing: /<>/debian/tmp/usr/include/dolfin/io/HDF5Interface.h -- Installing: /<>/debian/tmp/usr/include/dolfin/io/HDF5Utility.h -- Installing: /<>/debian/tmp/usr/include/dolfin/io/RAWFile.h -- Installing: /<>/debian/tmp/usr/include/dolfin/io/SVGFile.h -- Installing: /<>/debian/tmp/usr/include/dolfin/io/VTKFile.h -- Installing: /<>/debian/tmp/usr/include/dolfin/io/VTKWriter.h -- Installing: /<>/debian/tmp/usr/include/dolfin/io/X3DFile.h -- Installing: /<>/debian/tmp/usr/include/dolfin/io/X3DOM.h -- Installing: /<>/debian/tmp/usr/include/dolfin/io/XDMFFile.h -- Installing: /<>/debian/tmp/usr/include/dolfin/io/XMLArray.h -- Installing: /<>/debian/tmp/usr/include/dolfin/io/XMLFile.h -- Installing: /<>/debian/tmp/usr/include/dolfin/io/XMLFunctionData.h -- Installing: /<>/debian/tmp/usr/include/dolfin/io/XMLMeshFunction.h -- Installing: /<>/debian/tmp/usr/include/dolfin/io/XMLMesh.h -- Installing: /<>/debian/tmp/usr/include/dolfin/io/XMLMeshValueCollection.h -- Installing: /<>/debian/tmp/usr/include/dolfin/io/XMLParameters.h -- Installing: /<>/debian/tmp/usr/include/dolfin/io/XMLTable.h -- Installing: /<>/debian/tmp/usr/include/dolfin/io/xmlutils.h -- Installing: /<>/debian/tmp/usr/include/dolfin/io/XMLVector.h -- Installing: /<>/debian/tmp/usr/include/dolfin/io/XYZFile.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/Amesos2LUSolver.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/BelosKrylovSolver.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/BlockMatrix.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/BlockVector.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/CoordinateMatrix.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/DefaultFactory.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/dolfin_la.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/EigenFactory.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/EigenKrylovSolver.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/EigenLUSolver.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/EigenMatrix.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/EigenVector.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/GenericLinearAlgebraFactory.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/GenericLinearOperator.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/GenericLinearSolver.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/GenericMatrix.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/GenericTensor.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/GenericVector.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/Ifpack2Preconditioner.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/IndexMap.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/KrylovSolver.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/LinearAlgebraObject.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/LinearOperator.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/LinearSolver.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/LUSolver.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/Matrix.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/MueluPreconditioner.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/PETScBaseMatrix.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/PETScFactory.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/PETScKrylovSolver.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/PETScLinearOperator.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/PETScLUSolver.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/PETScMatrix.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/PETScObject.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/PETScOptions.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/PETScPreconditioner.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/PETScVector.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/Scalar.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/SLEPcEigenSolver.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/solve.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/SparsityPattern.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/SUNDIALSNVector.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/TensorLayout.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/test_nullspace.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/TpetraFactory.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/TpetraMatrix.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/TpetraVector.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/TrilinosParameters.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/TrilinosPreconditioner.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/Vector.h -- Installing: /<>/debian/tmp/usr/include/dolfin/la/VectorSpaceBasis.h -- Installing: /<>/debian/tmp/usr/include/dolfin/log/dolfin_log.h -- Installing: /<>/debian/tmp/usr/include/dolfin/log/Event.h -- Installing: /<>/debian/tmp/usr/include/dolfin/log/Logger.h -- Installing: /<>/debian/tmp/usr/include/dolfin/log/log.h -- Installing: /<>/debian/tmp/usr/include/dolfin/log/LogLevel.h -- Installing: /<>/debian/tmp/usr/include/dolfin/log/LogManager.h -- Installing: /<>/debian/tmp/usr/include/dolfin/log/LogStream.h -- Installing: /<>/debian/tmp/usr/include/dolfin/log/Progress.h -- Installing: /<>/debian/tmp/usr/include/dolfin/log/Table.h -- Installing: /<>/debian/tmp/usr/include/dolfin/math/basic.h -- Installing: /<>/debian/tmp/usr/include/dolfin/math/dolfin_math.h -- Installing: /<>/debian/tmp/usr/include/dolfin/math/Lagrange.h -- Installing: /<>/debian/tmp/usr/include/dolfin/math/Legendre.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/BoundaryComputation.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/BoundaryMesh.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/Cell.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/CellType.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/DistributedMeshTools.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/dolfin_mesh.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/DomainBoundary.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/DynamicMeshEditor.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/Edge.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/Face.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/FacetCell.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/Facet.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/HexahedronCell.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/IntervalCell.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/LocalMeshData.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/LocalMeshValueCollection.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/MeshColoring.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/MeshConnectivity.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/MeshData.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/MeshDomains.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/MeshEditor.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/MeshEntity.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/MeshEntityIteratorBase.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/MeshEntityIterator.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/MeshFunction.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/MeshGeometry.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/Mesh.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/MeshHierarchy.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/MeshOrdering.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/MeshPartitioning.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/MeshQuality.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/MeshRelation.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/MeshRenumbering.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/MeshSmoothing.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/MeshTopology.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/MeshTransformation.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/MeshValueCollection.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/MultiMesh.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/PeriodicBoundaryComputation.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/PointCell.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/QuadrilateralCell.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/SubDomain.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/SubMesh.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/SubsetIterator.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/TetrahedronCell.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/TopologyComputation.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/TriangleCell.h -- Installing: /<>/debian/tmp/usr/include/dolfin/mesh/Vertex.h -- Installing: /<>/debian/tmp/usr/include/dolfin/multistage/dolfin_multistage.h -- Installing: /<>/debian/tmp/usr/include/dolfin/multistage/MultiStageScheme.h -- Installing: /<>/debian/tmp/usr/include/dolfin/multistage/PointIntegralSolver.h -- Installing: /<>/debian/tmp/usr/include/dolfin/multistage/RKSolver.h -- Installing: /<>/debian/tmp/usr/include/dolfin/nls/dolfin_nls.h -- Installing: /<>/debian/tmp/usr/include/dolfin/nls/NewtonSolver.h -- Installing: /<>/debian/tmp/usr/include/dolfin/nls/NonlinearProblem.h -- Installing: /<>/debian/tmp/usr/include/dolfin/nls/OptimisationProblem.h -- Installing: /<>/debian/tmp/usr/include/dolfin/nls/PETScSNESSolver.h -- Installing: /<>/debian/tmp/usr/include/dolfin/nls/PETScTAOSolver.h -- Installing: /<>/debian/tmp/usr/include/dolfin/nls/TAOLinearBoundSolver.h -- Installing: /<>/debian/tmp/usr/include/dolfin/parameter/dolfin_parameter.h -- Installing: /<>/debian/tmp/usr/include/dolfin/parameter/GlobalParameters.h -- Installing: /<>/debian/tmp/usr/include/dolfin/parameter/Parameter.h -- Installing: /<>/debian/tmp/usr/include/dolfin/parameter/Parameters.h -- Installing: /<>/debian/tmp/usr/include/dolfin/refinement/BisectionRefinement1D.h -- Installing: /<>/debian/tmp/usr/include/dolfin/refinement/dolfin_refinement.h -- Installing: /<>/debian/tmp/usr/include/dolfin/refinement/LocalMeshCoarsening.h -- Installing: /<>/debian/tmp/usr/include/dolfin/refinement/ParallelRefinement.h -- Installing: /<>/debian/tmp/usr/include/dolfin/refinement/PlazaRefinementND.h -- Installing: /<>/debian/tmp/usr/include/dolfin/refinement/refine.h -- Installing: /<>/debian/tmp/usr/include/dolfin/refinement/RegularCutRefinement.h -- Installing: /<>/debian/tmp/usr/include/dolfin/ts/dolfin_ts.h -- Installing: /<>/debian/tmp/usr/include/dolfin/ts/CVode.h -- Installing: /<>/debian/tmp/usr/lib/x86_64-linux-gnu/libdolfin.so.2018.1.0 -- Installing: /<>/debian/tmp/usr/lib/x86_64-linux-gnu/libdolfin.so.2018.1 -- Installing: /<>/debian/tmp/usr/lib/x86_64-linux-gnu/libdolfin.so -- Installing: /<>/debian/tmp/usr/share/dolfin/cmake/DOLFINTargets.cmake -- Installing: /<>/debian/tmp/usr/share/dolfin/cmake/DOLFINTargets-relwithdebinfo.cmake -- Installing: /<>/debian/tmp/usr/share/dolfin/cmake/FindPETSc.cmake -- Installing: /<>/debian/tmp/usr/share/dolfin/cmake/FindSLEPc.cmake -- Installing: /<>/debian/tmp/usr/share/dolfin/cmake/DOLFINConfig.cmake -- Installing: /<>/debian/tmp/usr/share/dolfin/cmake/DOLFINConfigVersion.cmake -- Installing: /<>/debian/tmp/usr/share/dolfin/cmake/UseDOLFIN.cmake -- Installing: /<>/debian/tmp/usr/lib/x86_64-linux-gnu/pkgconfig/dolfin.pc ---------------------------------------------------------------------------- DOLFIN has now been installed in /usr and the demo programs have been installed in /usr/share/dolfin/demo Before rushing off to try the demos, don't forget to update your environment variables. This can be done easily using the helper file 'dolfin.conf' which sets the appropriate variables (for users of the Bash shell). To update your environment variables, run the following command: source /usr/share/dolfin/dolfin.conf For future reference, we recommend that you add this command to your configuration (.bashrc, .profile or similar). ---------------------------------------------------------------------------- make[2]: Leaving directory '/<>/obj-x86_64-linux-gnu' dh_numpy3 for v in python3.7; do \ cd python; \ PATH=/<>/debian/tmp/usr/bin:$PATH \ CXXFLAGS="-g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -isystem /<>/debian/tmp/usr/include" \ VERBOSE=1 \ $v setup.py install --root=/<>/debian/tmp --install-layout=deb; \ done; running install running build running build_py creating build creating build/lib.linux-x86_64-3.7 creating build/lib.linux-x86_64-3.7/dolfin copying dolfin/__init__.py -> build/lib.linux-x86_64-3.7/dolfin creating build/lib.linux-x86_64-3.7/dolfin/common copying dolfin/common/timer.py -> build/lib.linux-x86_64-3.7/dolfin/common copying dolfin/common/plotting.py -> build/lib.linux-x86_64-3.7/dolfin/common copying dolfin/common/__init__.py -> build/lib.linux-x86_64-3.7/dolfin/common creating build/lib.linux-x86_64-3.7/dolfin/function copying dolfin/function/constant.py -> build/lib.linux-x86_64-3.7/dolfin/function copying dolfin/function/expression.py -> build/lib.linux-x86_64-3.7/dolfin/function copying dolfin/function/specialfunctions.py -> build/lib.linux-x86_64-3.7/dolfin/function copying dolfin/function/functionspace.py -> build/lib.linux-x86_64-3.7/dolfin/function copying dolfin/function/function.py -> build/lib.linux-x86_64-3.7/dolfin/function copying dolfin/function/multimeshfunction.py -> build/lib.linux-x86_64-3.7/dolfin/function copying dolfin/function/multimeshfunctionspace.py -> build/lib.linux-x86_64-3.7/dolfin/function copying dolfin/function/__init__.py -> build/lib.linux-x86_64-3.7/dolfin/function copying dolfin/function/argument.py -> build/lib.linux-x86_64-3.7/dolfin/function copying dolfin/function/jit.py -> build/lib.linux-x86_64-3.7/dolfin/function creating build/lib.linux-x86_64-3.7/dolfin/fem copying dolfin/fem/form.py -> build/lib.linux-x86_64-3.7/dolfin/fem copying dolfin/fem/solving.py -> build/lib.linux-x86_64-3.7/dolfin/fem copying dolfin/fem/dirichletbc.py -> build/lib.linux-x86_64-3.7/dolfin/fem copying dolfin/fem/multimeshdirichletbc.py -> build/lib.linux-x86_64-3.7/dolfin/fem copying dolfin/fem/projection.py -> build/lib.linux-x86_64-3.7/dolfin/fem copying dolfin/fem/errorcontrolgenerator.py -> build/lib.linux-x86_64-3.7/dolfin/fem copying dolfin/fem/solvers.py -> build/lib.linux-x86_64-3.7/dolfin/fem copying dolfin/fem/norms.py -> build/lib.linux-x86_64-3.7/dolfin/fem copying dolfin/fem/problem.py -> build/lib.linux-x86_64-3.7/dolfin/fem copying dolfin/fem/adaptivesolving.py -> build/lib.linux-x86_64-3.7/dolfin/fem copying dolfin/fem/assembling.py -> build/lib.linux-x86_64-3.7/dolfin/fem copying dolfin/fem/formmanipulations.py -> build/lib.linux-x86_64-3.7/dolfin/fem copying dolfin/fem/__init__.py -> build/lib.linux-x86_64-3.7/dolfin/fem copying dolfin/fem/interpolation.py -> build/lib.linux-x86_64-3.7/dolfin/fem creating build/lib.linux-x86_64-3.7/dolfin/la copying dolfin/la/__init__.py -> build/lib.linux-x86_64-3.7/dolfin/la copying dolfin/la/solver.py -> build/lib.linux-x86_64-3.7/dolfin/la creating build/lib.linux-x86_64-3.7/dolfin/io copying dolfin/io/__init__.py -> build/lib.linux-x86_64-3.7/dolfin/io creating build/lib.linux-x86_64-3.7/dolfin/jit copying dolfin/jit/pybind11jit.py -> build/lib.linux-x86_64-3.7/dolfin/jit copying dolfin/jit/__init__.py -> build/lib.linux-x86_64-3.7/dolfin/jit copying dolfin/jit/jit.py -> build/lib.linux-x86_64-3.7/dolfin/jit creating build/lib.linux-x86_64-3.7/dolfin/mesh copying dolfin/mesh/meshfunction.py -> build/lib.linux-x86_64-3.7/dolfin/mesh copying dolfin/mesh/ale.py -> build/lib.linux-x86_64-3.7/dolfin/mesh copying dolfin/mesh/svgtools.py -> build/lib.linux-x86_64-3.7/dolfin/mesh copying dolfin/mesh/meshvaluecollection.py -> build/lib.linux-x86_64-3.7/dolfin/mesh copying dolfin/mesh/__init__.py -> build/lib.linux-x86_64-3.7/dolfin/mesh copying dolfin/mesh/subdomain.py -> build/lib.linux-x86_64-3.7/dolfin/mesh copying dolfin/mesh/ufl_util.py -> build/lib.linux-x86_64-3.7/dolfin/mesh creating build/lib.linux-x86_64-3.7/dolfin/multistage copying dolfin/multistage/factorize.py -> build/lib.linux-x86_64-3.7/dolfin/multistage copying dolfin/multistage/multistagesolvers.py -> build/lib.linux-x86_64-3.7/dolfin/multistage copying dolfin/multistage/rushlarsenschemes.py -> build/lib.linux-x86_64-3.7/dolfin/multistage copying dolfin/multistage/__init__.py -> build/lib.linux-x86_64-3.7/dolfin/multistage copying dolfin/multistage/multistagescheme.py -> build/lib.linux-x86_64-3.7/dolfin/multistage creating build/lib.linux-x86_64-3.7/dolfin/parameter copying dolfin/parameter/__init__.py -> build/lib.linux-x86_64-3.7/dolfin/parameter creating build/lib.linux-x86_64-3.7/dolfin_utils creating build/lib.linux-x86_64-3.7/dolfin_utils/meshconvert copying dolfin_utils/meshconvert/xml_writer.py -> build/lib.linux-x86_64-3.7/dolfin_utils/meshconvert copying dolfin_utils/meshconvert/abaqus.py -> build/lib.linux-x86_64-3.7/dolfin_utils/meshconvert copying dolfin_utils/meshconvert/__init__.py -> build/lib.linux-x86_64-3.7/dolfin_utils/meshconvert copying dolfin_utils/meshconvert/meshconvert.py -> build/lib.linux-x86_64-3.7/dolfin_utils/meshconvert creating build/lib.linux-x86_64-3.7/dolfin_utils/test copying dolfin_utils/test/paths.py -> build/lib.linux-x86_64-3.7/dolfin_utils/test copying dolfin_utils/test/__init__.py -> build/lib.linux-x86_64-3.7/dolfin_utils/test copying dolfin_utils/test/fixtures.py -> build/lib.linux-x86_64-3.7/dolfin_utils/test copying dolfin_utils/test/skips.py -> build/lib.linux-x86_64-3.7/dolfin_utils/test creating build/lib.linux-x86_64-3.7/fenics copying fenics/__init__.py -> build/lib.linux-x86_64-3.7/fenics running build_ext Re-run cmake no build system arguments -- The C compiler identification is GNU 8.2.0 -- The CXX compiler identification is GNU 8.2.0 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found PythonInterp: /usr/bin/python3.7 (found version "3.7.2") -- Found PythonLibs: /usr/lib/x86_64-linux-gnu/libpython3.7m.so -- Performing Test HAS_CPP14_FLAG -- Performing Test HAS_CPP14_FLAG - Success -- Found PkgConfig: /usr/bin/pkg-config (found version "0.29.1") -- Checking for one of the modules 'craypetsc_real;PETSc' -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of PetscInt -- Check size of PetscInt - failed -- Checking for one of the modules 'crayslepc_real;SLEPc' -- Performing Test HAS_FLTO -- Performing Test HAS_FLTO - Success -- LTO enabled -- Checking for package 'PETSc4Py' -- petsc4py version 3.10.0 found -- Found PETSc4py: /usr/lib/python3/dist-packages/petsc4py/include -- Found MPI4PY: /usr/lib/python3/dist-packages/mpi4py/include -- Configuring done -- Generating done -- Build files have been written to: /<>/python/build/temp.linux-x86_64-3.7 make[2]: Entering directory '/<>/python/build/temp.linux-x86_64-3.7' /usr/bin/cmake -S/<>/python -B/<>/python/build/temp.linux-x86_64-3.7 --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/python/build/temp.linux-x86_64-3.7/CMakeFiles /<>/python/build/temp.linux-x86_64-3.7/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/<>/python/build/temp.linux-x86_64-3.7' /usr/bin/make -f CMakeFiles/cpp.dir/build.make CMakeFiles/cpp.dir/depend make[4]: Entering directory '/<>/python/build/temp.linux-x86_64-3.7' cd /<>/python/build/temp.linux-x86_64-3.7 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/python /<>/python /<>/python/build/temp.linux-x86_64-3.7 /<>/python/build/temp.linux-x86_64-3.7 /<>/python/build/temp.linux-x86_64-3.7/CMakeFiles/cpp.dir/DependInfo.cmake --color= Dependee "/<>/python/build/temp.linux-x86_64-3.7/CMakeFiles/cpp.dir/DependInfo.cmake" is newer than depender "/<>/python/build/temp.linux-x86_64-3.7/CMakeFiles/cpp.dir/depend.internal". Dependee "/<>/python/build/temp.linux-x86_64-3.7/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<>/python/build/temp.linux-x86_64-3.7/CMakeFiles/cpp.dir/depend.internal". Scanning dependencies of target cpp make[4]: Leaving directory '/<>/python/build/temp.linux-x86_64-3.7' /usr/bin/make -f CMakeFiles/cpp.dir/build.make CMakeFiles/cpp.dir/build make[4]: Entering directory '/<>/python/build/temp.linux-x86_64-3.7' [ 4%] Building CXX object CMakeFiles/cpp.dir/src/dolfin.cpp.o /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_PYBIND11_MPI4PY -DHAS_PYBIND11_PETSC4PY -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Dcpp_EXPORTS -I/usr/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -isystem /usr/include/python3.7m -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -isystem /<>/debian/tmp/usr/include -DVERSION_INFO=\"2018.1.0\" -O3 -DNDEBUG -fPIC -fvisibility=hidden -std=c++14 -flto -fno-fat-lto-objects -fvisibility=hidden -std=c++11 -o CMakeFiles/cpp.dir/src/dolfin.cpp.o -c /<>/python/src/dolfin.cpp [ 9%] Building CXX object CMakeFiles/cpp.dir/src/parameter.cpp.o /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_PYBIND11_MPI4PY -DHAS_PYBIND11_PETSC4PY -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Dcpp_EXPORTS -I/usr/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -isystem /usr/include/python3.7m -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -isystem /<>/debian/tmp/usr/include -DVERSION_INFO=\"2018.1.0\" -O3 -DNDEBUG -fPIC -fvisibility=hidden -std=c++14 -flto -fno-fat-lto-objects -fvisibility=hidden -std=c++11 -o CMakeFiles/cpp.dir/src/parameter.cpp.o -c /<>/python/src/parameter.cpp [ 14%] Building CXX object CMakeFiles/cpp.dir/src/adaptivity.cpp.o /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_PYBIND11_MPI4PY -DHAS_PYBIND11_PETSC4PY -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Dcpp_EXPORTS -I/usr/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -isystem /usr/include/python3.7m -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -isystem /<>/debian/tmp/usr/include -DVERSION_INFO=\"2018.1.0\" -O3 -DNDEBUG -fPIC -fvisibility=hidden -std=c++14 -flto -fno-fat-lto-objects -fvisibility=hidden -std=c++11 -o CMakeFiles/cpp.dir/src/adaptivity.cpp.o -c /<>/python/src/adaptivity.cpp [ 19%] Building CXX object CMakeFiles/cpp.dir/src/ale.cpp.o /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_PYBIND11_MPI4PY -DHAS_PYBIND11_PETSC4PY -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Dcpp_EXPORTS -I/usr/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -isystem /usr/include/python3.7m -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -isystem /<>/debian/tmp/usr/include -DVERSION_INFO=\"2018.1.0\" -O3 -DNDEBUG -fPIC -fvisibility=hidden -std=c++14 -flto -fno-fat-lto-objects -fvisibility=hidden -std=c++11 -o CMakeFiles/cpp.dir/src/ale.cpp.o -c /<>/python/src/ale.cpp [ 23%] Building CXX object CMakeFiles/cpp.dir/src/common.cpp.o /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_PYBIND11_MPI4PY -DHAS_PYBIND11_PETSC4PY -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Dcpp_EXPORTS -I/usr/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -isystem /usr/include/python3.7m -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -isystem /<>/debian/tmp/usr/include -DVERSION_INFO=\"2018.1.0\" -O3 -DNDEBUG -fPIC -fvisibility=hidden -std=c++14 -flto -fno-fat-lto-objects -fvisibility=hidden -std=c++11 -o CMakeFiles/cpp.dir/src/common.cpp.o -c /<>/python/src/common.cpp [ 28%] Building CXX object CMakeFiles/cpp.dir/src/fem.cpp.o /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_PYBIND11_MPI4PY -DHAS_PYBIND11_PETSC4PY -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Dcpp_EXPORTS -I/usr/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -isystem /usr/include/python3.7m -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -isystem /<>/debian/tmp/usr/include -DVERSION_INFO=\"2018.1.0\" -O3 -DNDEBUG -fPIC -fvisibility=hidden -std=c++14 -flto -fno-fat-lto-objects -fvisibility=hidden -std=c++11 -o CMakeFiles/cpp.dir/src/fem.cpp.o -c /<>/python/src/fem.cpp [ 33%] Building CXX object CMakeFiles/cpp.dir/src/function.cpp.o /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_PYBIND11_MPI4PY -DHAS_PYBIND11_PETSC4PY -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Dcpp_EXPORTS -I/usr/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -isystem /usr/include/python3.7m -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -isystem /<>/debian/tmp/usr/include -DVERSION_INFO=\"2018.1.0\" -O3 -DNDEBUG -fPIC -fvisibility=hidden -std=c++14 -flto -fno-fat-lto-objects -fvisibility=hidden -std=c++11 -o CMakeFiles/cpp.dir/src/function.cpp.o -c /<>/python/src/function.cpp [ 38%] Building CXX object CMakeFiles/cpp.dir/src/generation.cpp.o /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_PYBIND11_MPI4PY -DHAS_PYBIND11_PETSC4PY -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Dcpp_EXPORTS -I/usr/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -isystem /usr/include/python3.7m -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -isystem /<>/debian/tmp/usr/include -DVERSION_INFO=\"2018.1.0\" -O3 -DNDEBUG -fPIC -fvisibility=hidden -std=c++14 -flto -fno-fat-lto-objects -fvisibility=hidden -std=c++11 -o CMakeFiles/cpp.dir/src/generation.cpp.o -c /<>/python/src/generation.cpp [ 42%] Building CXX object CMakeFiles/cpp.dir/src/geometry.cpp.o /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_PYBIND11_MPI4PY -DHAS_PYBIND11_PETSC4PY -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Dcpp_EXPORTS -I/usr/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -isystem /usr/include/python3.7m -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -isystem /<>/debian/tmp/usr/include -DVERSION_INFO=\"2018.1.0\" -O3 -DNDEBUG -fPIC -fvisibility=hidden -std=c++14 -flto -fno-fat-lto-objects -fvisibility=hidden -std=c++11 -o CMakeFiles/cpp.dir/src/geometry.cpp.o -c /<>/python/src/geometry.cpp [ 47%] Building CXX object CMakeFiles/cpp.dir/src/graph.cpp.o /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_PYBIND11_MPI4PY -DHAS_PYBIND11_PETSC4PY -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Dcpp_EXPORTS -I/usr/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -isystem /usr/include/python3.7m -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -isystem /<>/debian/tmp/usr/include -DVERSION_INFO=\"2018.1.0\" -O3 -DNDEBUG -fPIC -fvisibility=hidden -std=c++14 -flto -fno-fat-lto-objects -fvisibility=hidden -std=c++11 -o CMakeFiles/cpp.dir/src/graph.cpp.o -c /<>/python/src/graph.cpp [ 52%] Building CXX object CMakeFiles/cpp.dir/src/log.cpp.o /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_PYBIND11_MPI4PY -DHAS_PYBIND11_PETSC4PY -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Dcpp_EXPORTS -I/usr/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -isystem /usr/include/python3.7m -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -isystem /<>/debian/tmp/usr/include -DVERSION_INFO=\"2018.1.0\" -O3 -DNDEBUG -fPIC -fvisibility=hidden -std=c++14 -flto -fno-fat-lto-objects -fvisibility=hidden -std=c++11 -o CMakeFiles/cpp.dir/src/log.cpp.o -c /<>/python/src/log.cpp [ 57%] Building CXX object CMakeFiles/cpp.dir/src/math.cpp.o /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_PYBIND11_MPI4PY -DHAS_PYBIND11_PETSC4PY -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Dcpp_EXPORTS -I/usr/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -isystem /usr/include/python3.7m -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -isystem /<>/debian/tmp/usr/include -DVERSION_INFO=\"2018.1.0\" -O3 -DNDEBUG -fPIC -fvisibility=hidden -std=c++14 -flto -fno-fat-lto-objects -fvisibility=hidden -std=c++11 -o CMakeFiles/cpp.dir/src/math.cpp.o -c /<>/python/src/math.cpp [ 61%] Building CXX object CMakeFiles/cpp.dir/src/mesh.cpp.o /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_PYBIND11_MPI4PY -DHAS_PYBIND11_PETSC4PY -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Dcpp_EXPORTS -I/usr/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -isystem /usr/include/python3.7m -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -isystem /<>/debian/tmp/usr/include -DVERSION_INFO=\"2018.1.0\" -O3 -DNDEBUG -fPIC -fvisibility=hidden -std=c++14 -flto -fno-fat-lto-objects -fvisibility=hidden -std=c++11 -o CMakeFiles/cpp.dir/src/mesh.cpp.o -c /<>/python/src/mesh.cpp [ 66%] Building CXX object CMakeFiles/cpp.dir/src/multistage.cpp.o /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_PYBIND11_MPI4PY -DHAS_PYBIND11_PETSC4PY -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Dcpp_EXPORTS -I/usr/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -isystem /usr/include/python3.7m -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -isystem /<>/debian/tmp/usr/include -DVERSION_INFO=\"2018.1.0\" -O3 -DNDEBUG -fPIC -fvisibility=hidden -std=c++14 -flto -fno-fat-lto-objects -fvisibility=hidden -std=c++11 -o CMakeFiles/cpp.dir/src/multistage.cpp.o -c /<>/python/src/multistage.cpp [ 71%] Building CXX object CMakeFiles/cpp.dir/src/ts.cpp.o /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_PYBIND11_MPI4PY -DHAS_PYBIND11_PETSC4PY -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Dcpp_EXPORTS -I/usr/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -isystem /usr/include/python3.7m -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -isystem /<>/debian/tmp/usr/include -DVERSION_INFO=\"2018.1.0\" -O3 -DNDEBUG -fPIC -fvisibility=hidden -std=c++14 -flto -fno-fat-lto-objects -fvisibility=hidden -std=c++11 -o CMakeFiles/cpp.dir/src/ts.cpp.o -c /<>/python/src/ts.cpp [ 76%] Building CXX object CMakeFiles/cpp.dir/src/io.cpp.o /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_PYBIND11_MPI4PY -DHAS_PYBIND11_PETSC4PY -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Dcpp_EXPORTS -I/usr/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -isystem /usr/include/python3.7m -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -isystem /<>/debian/tmp/usr/include -DVERSION_INFO=\"2018.1.0\" -O3 -DNDEBUG -fPIC -fvisibility=hidden -std=c++14 -flto -fno-fat-lto-objects -fvisibility=hidden -std=c++11 -o CMakeFiles/cpp.dir/src/io.cpp.o -c /<>/python/src/io.cpp [ 80%] Building CXX object CMakeFiles/cpp.dir/src/la.cpp.o /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_PYBIND11_MPI4PY -DHAS_PYBIND11_PETSC4PY -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Dcpp_EXPORTS -I/usr/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -isystem /usr/include/python3.7m -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -isystem /<>/debian/tmp/usr/include -DVERSION_INFO=\"2018.1.0\" -O3 -DNDEBUG -fPIC -fvisibility=hidden -std=c++14 -flto -fno-fat-lto-objects -fvisibility=hidden -std=c++11 -o CMakeFiles/cpp.dir/src/la.cpp.o -c /<>/python/src/la.cpp [ 85%] Building CXX object CMakeFiles/cpp.dir/src/nls.cpp.o /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_PYBIND11_MPI4PY -DHAS_PYBIND11_PETSC4PY -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Dcpp_EXPORTS -I/usr/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -isystem /usr/include/python3.7m -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -isystem /<>/debian/tmp/usr/include -DVERSION_INFO=\"2018.1.0\" -O3 -DNDEBUG -fPIC -fvisibility=hidden -std=c++14 -flto -fno-fat-lto-objects -fvisibility=hidden -std=c++11 -o CMakeFiles/cpp.dir/src/nls.cpp.o -c /<>/python/src/nls.cpp [ 90%] Building CXX object CMakeFiles/cpp.dir/src/refinement.cpp.o /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_PYBIND11_MPI4PY -DHAS_PYBIND11_PETSC4PY -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Dcpp_EXPORTS -I/usr/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -isystem /usr/include/python3.7m -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -isystem /<>/debian/tmp/usr/include -DVERSION_INFO=\"2018.1.0\" -O3 -DNDEBUG -fPIC -fvisibility=hidden -std=c++14 -flto -fno-fat-lto-objects -fvisibility=hidden -std=c++11 -o CMakeFiles/cpp.dir/src/refinement.cpp.o -c /<>/python/src/refinement.cpp [ 95%] Building CXX object CMakeFiles/cpp.dir/src/MPICommWrapper.cpp.o /usr/bin/c++ -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_PYBIND11_MPI4PY -DHAS_PYBIND11_PETSC4PY -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -D_FORTIFY_SOURCE=2 -Dcpp_EXPORTS -I/usr/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -isystem /usr/include/python3.7m -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -isystem /<>/debian/tmp/usr/include -DVERSION_INFO=\"2018.1.0\" -O3 -DNDEBUG -fPIC -fvisibility=hidden -std=c++14 -flto -fno-fat-lto-objects -fvisibility=hidden -std=c++11 -o CMakeFiles/cpp.dir/src/MPICommWrapper.cpp.o -c /<>/python/src/MPICommWrapper.cpp [100%] Linking CXX shared library ../lib.linux-x86_64-3.7/dolfin/cpp.cpython-37m-x86_64-linux-gnu.so /usr/bin/cmake -E cmake_link_script CMakeFiles/cpp.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -isystem /<>/debian/tmp/usr/include -DVERSION_INFO=\"2018.1.0\" -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -Wl,-soname,cpp.cpython-37m-x86_64-linux-gnu.so -o ../lib.linux-x86_64-3.7/dolfin/cpp.cpython-37m-x86_64-linux-gnu.so CMakeFiles/cpp.dir/src/dolfin.cpp.o CMakeFiles/cpp.dir/src/parameter.cpp.o CMakeFiles/cpp.dir/src/adaptivity.cpp.o CMakeFiles/cpp.dir/src/ale.cpp.o CMakeFiles/cpp.dir/src/common.cpp.o CMakeFiles/cpp.dir/src/fem.cpp.o CMakeFiles/cpp.dir/src/function.cpp.o CMakeFiles/cpp.dir/src/generation.cpp.o CMakeFiles/cpp.dir/src/geometry.cpp.o CMakeFiles/cpp.dir/src/graph.cpp.o CMakeFiles/cpp.dir/src/log.cpp.o CMakeFiles/cpp.dir/src/math.cpp.o CMakeFiles/cpp.dir/src/mesh.cpp.o CMakeFiles/cpp.dir/src/multistage.cpp.o CMakeFiles/cpp.dir/src/ts.cpp.o CMakeFiles/cpp.dir/src/io.cpp.o CMakeFiles/cpp.dir/src/la.cpp.o CMakeFiles/cpp.dir/src/nls.cpp.o CMakeFiles/cpp.dir/src/refinement.cpp.o CMakeFiles/cpp.dir/src/MPICommWrapper.cpp.o -Wl,-rpath,/<>/debian/tmp/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib:/usr/lib/x86_64-linux-gnu/openmpi/lib -flto /<>/debian/tmp/usr/lib/x86_64-linux-gnu/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so -lsz -lz -ldl -lm /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/bin/strip /<>/python/build/lib.linux-x86_64-3.7/dolfin/cpp.cpython-37m-x86_64-linux-gnu.so make[4]: Leaving directory '/<>/python/build/temp.linux-x86_64-3.7' [100%] Built target cpp make[3]: Leaving directory '/<>/python/build/temp.linux-x86_64-3.7' /usr/bin/cmake -E cmake_progress_start /<>/python/build/temp.linux-x86_64-3.7/CMakeFiles 0 make[2]: Leaving directory '/<>/python/build/temp.linux-x86_64-3.7' running install_lib creating /<>/debian/tmp/usr/lib/python3 creating /<>/debian/tmp/usr/lib/python3/dist-packages creating /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin creating /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/parameter copying build/lib.linux-x86_64-3.7/dolfin/parameter/__init__.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/parameter copying build/lib.linux-x86_64-3.7/dolfin/cpp.cpython-37m-x86_64-linux-gnu.so -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin creating /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/common copying build/lib.linux-x86_64-3.7/dolfin/common/timer.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/common copying build/lib.linux-x86_64-3.7/dolfin/common/plotting.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/common copying build/lib.linux-x86_64-3.7/dolfin/common/__init__.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/common creating /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/multistage copying build/lib.linux-x86_64-3.7/dolfin/multistage/factorize.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/multistage copying build/lib.linux-x86_64-3.7/dolfin/multistage/multistagesolvers.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/multistage copying build/lib.linux-x86_64-3.7/dolfin/multistage/rushlarsenschemes.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/multistage copying build/lib.linux-x86_64-3.7/dolfin/multistage/__init__.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/multistage copying build/lib.linux-x86_64-3.7/dolfin/multistage/multistagescheme.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/multistage creating /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/fem copying build/lib.linux-x86_64-3.7/dolfin/fem/form.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/fem copying build/lib.linux-x86_64-3.7/dolfin/fem/solving.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/fem copying build/lib.linux-x86_64-3.7/dolfin/fem/dirichletbc.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/fem copying build/lib.linux-x86_64-3.7/dolfin/fem/multimeshdirichletbc.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/fem copying build/lib.linux-x86_64-3.7/dolfin/fem/projection.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/fem copying build/lib.linux-x86_64-3.7/dolfin/fem/errorcontrolgenerator.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/fem copying build/lib.linux-x86_64-3.7/dolfin/fem/solvers.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/fem copying build/lib.linux-x86_64-3.7/dolfin/fem/norms.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/fem copying build/lib.linux-x86_64-3.7/dolfin/fem/problem.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/fem copying build/lib.linux-x86_64-3.7/dolfin/fem/adaptivesolving.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/fem copying build/lib.linux-x86_64-3.7/dolfin/fem/assembling.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/fem copying build/lib.linux-x86_64-3.7/dolfin/fem/formmanipulations.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/fem copying build/lib.linux-x86_64-3.7/dolfin/fem/__init__.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/fem copying build/lib.linux-x86_64-3.7/dolfin/fem/interpolation.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/fem creating /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/io copying build/lib.linux-x86_64-3.7/dolfin/io/__init__.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/io creating /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/la copying build/lib.linux-x86_64-3.7/dolfin/la/__init__.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/la copying build/lib.linux-x86_64-3.7/dolfin/la/solver.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/la creating /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/function copying build/lib.linux-x86_64-3.7/dolfin/function/constant.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/function copying build/lib.linux-x86_64-3.7/dolfin/function/expression.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/function copying build/lib.linux-x86_64-3.7/dolfin/function/specialfunctions.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/function copying build/lib.linux-x86_64-3.7/dolfin/function/functionspace.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/function copying build/lib.linux-x86_64-3.7/dolfin/function/function.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/function copying build/lib.linux-x86_64-3.7/dolfin/function/multimeshfunction.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/function copying build/lib.linux-x86_64-3.7/dolfin/function/multimeshfunctionspace.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/function copying build/lib.linux-x86_64-3.7/dolfin/function/__init__.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/function copying build/lib.linux-x86_64-3.7/dolfin/function/argument.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/function copying build/lib.linux-x86_64-3.7/dolfin/function/jit.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/function copying build/lib.linux-x86_64-3.7/dolfin/__init__.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin creating /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/jit copying build/lib.linux-x86_64-3.7/dolfin/jit/pybind11jit.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/jit copying build/lib.linux-x86_64-3.7/dolfin/jit/__init__.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/jit copying build/lib.linux-x86_64-3.7/dolfin/jit/jit.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/jit creating /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/mesh copying build/lib.linux-x86_64-3.7/dolfin/mesh/meshfunction.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/mesh copying build/lib.linux-x86_64-3.7/dolfin/mesh/ale.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/mesh copying build/lib.linux-x86_64-3.7/dolfin/mesh/svgtools.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/mesh copying build/lib.linux-x86_64-3.7/dolfin/mesh/meshvaluecollection.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/mesh copying build/lib.linux-x86_64-3.7/dolfin/mesh/__init__.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/mesh copying build/lib.linux-x86_64-3.7/dolfin/mesh/subdomain.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/mesh copying build/lib.linux-x86_64-3.7/dolfin/mesh/ufl_util.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/mesh creating /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin_utils creating /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin_utils/meshconvert copying build/lib.linux-x86_64-3.7/dolfin_utils/meshconvert/xml_writer.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin_utils/meshconvert copying build/lib.linux-x86_64-3.7/dolfin_utils/meshconvert/abaqus.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin_utils/meshconvert copying build/lib.linux-x86_64-3.7/dolfin_utils/meshconvert/__init__.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin_utils/meshconvert copying build/lib.linux-x86_64-3.7/dolfin_utils/meshconvert/meshconvert.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin_utils/meshconvert creating /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin_utils/test copying build/lib.linux-x86_64-3.7/dolfin_utils/test/paths.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin_utils/test copying build/lib.linux-x86_64-3.7/dolfin_utils/test/__init__.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin_utils/test copying build/lib.linux-x86_64-3.7/dolfin_utils/test/fixtures.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin_utils/test copying build/lib.linux-x86_64-3.7/dolfin_utils/test/skips.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin_utils/test creating /<>/debian/tmp/usr/lib/python3/dist-packages/fenics copying build/lib.linux-x86_64-3.7/fenics/__init__.py -> /<>/debian/tmp/usr/lib/python3/dist-packages/fenics byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/parameter/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/common/timer.py to timer.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/common/plotting.py to plotting.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/common/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/multistage/factorize.py to factorize.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/multistage/multistagesolvers.py to multistagesolvers.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/multistage/rushlarsenschemes.py to rushlarsenschemes.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/multistage/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/multistage/multistagescheme.py to multistagescheme.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/fem/form.py to form.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/fem/solving.py to solving.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/fem/dirichletbc.py to dirichletbc.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/fem/multimeshdirichletbc.py to multimeshdirichletbc.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/fem/projection.py to projection.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/fem/errorcontrolgenerator.py to errorcontrolgenerator.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/fem/solvers.py to solvers.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/fem/norms.py to norms.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/fem/problem.py to problem.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/fem/adaptivesolving.py to adaptivesolving.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/fem/assembling.py to assembling.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/fem/formmanipulations.py to formmanipulations.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/fem/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/fem/interpolation.py to interpolation.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/io/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/la/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/la/solver.py to solver.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/function/constant.py to constant.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/function/expression.py to expression.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/function/specialfunctions.py to specialfunctions.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/function/functionspace.py to functionspace.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/function/function.py to function.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/function/multimeshfunction.py to multimeshfunction.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/function/multimeshfunctionspace.py to multimeshfunctionspace.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/function/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/function/argument.py to argument.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/function/jit.py to jit.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/jit/pybind11jit.py to pybind11jit.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/jit/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/jit/jit.py to jit.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/mesh/meshfunction.py to meshfunction.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/mesh/ale.py to ale.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/mesh/svgtools.py to svgtools.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/mesh/meshvaluecollection.py to meshvaluecollection.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/mesh/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/mesh/subdomain.py to subdomain.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin/mesh/ufl_util.py to ufl_util.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin_utils/meshconvert/xml_writer.py to xml_writer.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin_utils/meshconvert/abaqus.py to abaqus.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin_utils/meshconvert/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin_utils/meshconvert/meshconvert.py to meshconvert.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin_utils/test/paths.py to paths.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin_utils/test/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin_utils/test/fixtures.py to fixtures.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/dolfin_utils/test/skips.py to skips.cpython-37.pyc byte-compiling /<>/debian/tmp/usr/lib/python3/dist-packages/fenics/__init__.py to __init__.cpython-37.pyc running install_egg_info running egg_info creating fenics_dolfin.egg-info writing fenics_dolfin.egg-info/PKG-INFO writing dependency_links to fenics_dolfin.egg-info/dependency_links.txt writing requirements to fenics_dolfin.egg-info/requires.txt writing top-level names to fenics_dolfin.egg-info/top_level.txt writing manifest file 'fenics_dolfin.egg-info/SOURCES.txt' reading manifest file 'fenics_dolfin.egg-info/SOURCES.txt' writing manifest file 'fenics_dolfin.egg-info/SOURCES.txt' Copying fenics_dolfin.egg-info to /<>/debian/tmp/usr/lib/python3/dist-packages/fenics_dolfin-2018.1.0.egg-info Skipping SOURCES.txt running install_scripts chrpath -d /<>/debian/tmp/usr/lib/python*/dist-packages/dolfin/*.so sed -i "s/-D_FORTIFY_SOURCE=2//g" /<>/debian/tmp/usr/lib/x86_64-linux-gnu/pkgconfig/dolfin.pc sed -i "s|-DNDEBUG||g" /<>/debian/tmp/usr/lib/x86_64-linux-gnu/pkgconfig/dolfin.pc make[1]: Leaving directory '/<>' debian/rules override_dh_install-indep make[1]: Entering directory '/<>' py3versions: no X-Python3-Version in control file, using supported versions cd python/demo; \ python3 generate-demo-files.py extract written to /<>/python/demo/documented/stokes-iterative/demo_stokes-iterative.py extract written to /<>/python/demo/documented/hyperelasticity/demo_hyperelasticity.py extract written to /<>/python/demo/documented/eigenvalue/demo_eigenvalue.py extract written to /<>/python/demo/documented/nonlinear-poisson/demo_nonlinear-poisson.py extract written to /<>/python/demo/documented/auto-adaptive-poisson/demo_auto-adaptive-poisson.py extract written to /<>/python/demo/documented/neumann-poisson/demo_neumann-poisson.py extract written to /<>/python/demo/documented/singular-poisson/demo_singular-poisson.py extract written to /<>/python/demo/documented/biharmonic/demo_biharmonic.py extract written to /<>/python/demo/documented/mixed-poisson/demo_mixed-poisson.py extract written to /<>/python/demo/documented/maxwell-eigenvalues/demo_maxwell-eigenvalues.py extract written to /<>/python/demo/documented/poisson/demo_poisson.py extract written to /<>/python/demo/documented/cahn-hilliard/demo_cahn-hilliard.py extract written to /<>/python/demo/documented/nonmatching-interpolation/demo_nonmatching-interpolation.py extract written to /<>/python/demo/documented/built-in-meshes/demo_built-in-meshes.py Converting rst files in in /<>/python/demo/documented/stokes-iterative ... Converting rst files in in /<>/python/demo/documented/hyperelasticity ... Converting rst files in in /<>/python/demo/documented/eigenvalue ... Converting rst files in in /<>/python/demo/documented/nonlinear-poisson ... Converting rst files in in /<>/python/demo/documented/auto-adaptive-poisson ... Converting rst files in in /<>/python/demo/documented/neumann-poisson ... Converting rst files in in /<>/python/demo/documented/singular-poisson ... Converting rst files in in /<>/python/demo/documented/biharmonic ... Converting rst files in in /<>/python/demo/documented/mixed-poisson ... Converting rst files in in /<>/python/demo/documented/maxwell-eigenvalues ... Converting rst files in in /<>/python/demo/documented/poisson ... Converting rst files in in /<>/python/demo/documented/cahn-hilliard ... Converting rst files in in /<>/python/demo/documented/nonmatching-interpolation ... Converting rst files in in /<>/python/demo/documented/built-in-meshes ... dh_install -X*.rst make[1]: Leaving directory '/<>' dh_install -O--buildsystem=cmake -Npython-dolfin -Ndolfin-doc -Ndolfin-bin dh_installdocs -O--buildsystem=cmake dh_installchangelogs -O--buildsystem=cmake dh_installman -O--buildsystem=cmake dh_python3 -O--buildsystem=cmake I: dh_python3 tools:113: replacing shebang in debian/dolfin-bin/usr/bin/dolfin-plot I: dh_python3 tools:113: replacing shebang in debian/dolfin-bin/usr/bin/dolfin-order I: dh_python3 tools:113: replacing shebang in debian/dolfin-bin/usr/bin/dolfin-convert dh_installinit -O--buildsystem=cmake dh_lintian -O--buildsystem=cmake dh_perl -O--buildsystem=cmake dh_link -O--buildsystem=cmake dh_strip_nondeterminism -O--buildsystem=cmake debian/rules override_dh_compress make[1]: Entering directory '/<>' py3versions: no X-Python3-Version in control file, using supported versions dh_compress -X.py -X.cpp -X.h -X.pdf -X.ufl make[1]: Leaving directory '/<>' debian/rules override_dh_fixperms-indep make[1]: Entering directory '/<>' py3versions: no X-Python3-Version in control file, using supported versions dh_fixperms chmod a-x debian/dolfin-doc/usr/share/dolfin/demo-python/*/*/*.py make[1]: Leaving directory '/<>' dh_fixperms -O--buildsystem=cmake -Npython-dolfin -Ndolfin-doc -Ndolfin-bin dh_missing -O--buildsystem=cmake debian/rules override_dh_strip make[1]: Entering directory '/<>' py3versions: no X-Python3-Version in control file, using supported versions dh_strip --package=libdolfin2018.1 --dbgsym-migration='libdolfin2017.2-dbg (<< 2017.2.0.post0-1~)' -Xpython dh_strip --package=python3-dolfin --dbgsym-migration='python3-dolfin-dbg (<< 2017.2.0.post0-1~)' -Xpython2 make[1]: Leaving directory '/<>' dh_makeshlibs -O--buildsystem=cmake debian/rules override_dh_shlibdeps make[1]: Entering directory '/<>' py3versions: no X-Python3-Version in control file, using supported versions dh_shlibdeps --dpkg-shlibdeps-params=--ignore-missing-info dpkg-shlibdeps: warning: debian/python3-dolfin/usr/lib/python3/dist-packages/dolfin/cpp.cpython-37m-x86_64-linux-gnu.so contains an unresolvable reference to symbol Py_GetVersion: it's probably a plugin dpkg-shlibdeps: warning: 129 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: symbol pthread_create used by debian/libdolfin2018.1/usr/lib/x86_64-linux-gnu/libdolfin.so.2018.1.0 found in none of the libraries make[1]: Leaving directory '/<>' dh_installdeb -O--buildsystem=cmake debian/rules override_dh_gencontrol make[1]: Entering directory '/<>' py3versions: no X-Python3-Version in control file, using supported versions echo "python3-petsc4py:Depends=python3-petsc4py (>= 3.10), python3-petsc4py (<< 3.11), python3-slepc4py (>= 3.10), python3-slepc4py (<< 3.11)" >> debian/python3-dolfin.substvars echo "python-petsc4py-alt:Depends=python3-petsc4py (>= 3.10), python3-petsc4py (<< 3.11), python3-slepc4py (>= 3.10), python3-slepc4py (<< 3.11)" >> debian/libdolfin-dev.substvars dh_gencontrol -- -Vpetsc:Depends="libpetsc-real3.10-dev | libpetsc3.10.3-dev, libslepc-real3.10-dev | libslepc3.10.1-dev" -Vfenics:Upstream-Version=2018.1 -Vfenics:Next-Upstream-Version=2018.2~ \ -Vpybind11:Upstream-Version=2.2.4 -Vpybind11:Next-Upstream-Version=2.2.5 dpkg-gencontrol: warning: package python3-dolfin: substitution variable ${python3:Provides} unused, but is defined dpkg-gencontrol: warning: package python3-dolfin: substitution variable ${python3:Versions} unused, but is defined dpkg-gencontrol: warning: package libdolfin-dev: substitution variable ${python-petsc4py-alt:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfin-dev: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package dolfin-doc: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package python-dolfin: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfin2018.1: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfin2018.1: substitution variable ${python3:Depends} unused, but is defined make[1]: Leaving directory '/<>' dh_md5sums -O--buildsystem=cmake dh_builddeb -O--buildsystem=cmake INFO: pkgstriptranslations version 143 INFO: pkgstriptranslations version 143 INFO: pkgstriptranslations version 143 INFO: pkgstriptranslations version 143 pkgstriptranslations: processing libdolfin-dev (in debian/libdolfin-dev); do_strip: , oemstrip: pkgstriptranslations: processing dolfin-bin (in debian/dolfin-bin); do_strip: , oemstrip: pkgstriptranslations: processing python-dolfin (in debian/python-dolfin); do_strip: , oemstrip: pkgstriptranslations: processing libdolfin2018.1-dbgsym (in debian/.debhelper/libdolfin2018.1/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/libdolfin-dev/DEBIAN/control, package libdolfin-dev, directory debian/libdolfin-dev pkgstripfiles: processing control file: debian/python-dolfin/DEBIAN/control, package python-dolfin, directory debian/python-dolfin INFO: pkgstripfiles: waiting for lock (python-dolfin) ... Searching for duplicated docs in dependency libdolfin2018.1... symlinking changelog.Debian.gz in libdolfin-dev to file in libdolfin2018.1 pkgstripfiles: Running PNG optimization (using 4 cpus) for package libdolfin-dev ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libdolfin-dev' in '../libdolfin-dev_2018.1.0.post1-13_amd64.deb'. INFO: pkgstripfiles: waiting for lock (python-dolfin) ... INFO: pkgstripfiles: waiting for lock (python-dolfin) ... INFO: pkgstripfiles: waiting for lock (python-dolfin) ... INFO: pkgstripfiles: waiting for lock (python-dolfin) ... pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " INFO: pkgstripfiles: waiting for lock (python-dolfin) ... INFO: pkgstriptranslations version 143 INFO: pkgstripfiles: waiting for lock (python-dolfin) ... pkgstriptranslations: processing libdolfin2018.1 (in debian/libdolfin2018.1); do_strip: , oemstrip: pkgstripfiles: processing control file: debian/dolfin-bin/DEBIAN/control, package dolfin-bin, directory debian/dolfin-bin INFO: pkgstripfiles: waiting for lock (dolfin-bin) ... pkgstripfiles: processing control file: debian/.debhelper/libdolfin2018.1/dbgsym-root/DEBIAN/control, package libdolfin2018.1-dbgsym, directory debian/.debhelper/libdolfin2018.1/dbgsym-root dpkg-deb: building package 'libdolfin2018.1-dbgsym' in 'debian/.debhelper/scratch-space/build-libdolfin2018.1/libdolfin2018.1-dbgsym_2018.1.0.post1-13_amd64.deb'. INFO: pkgstripfiles: waiting for lock (python-dolfin) ... INFO: pkgstripfiles: waiting for lock (dolfin-bin) ... INFO: pkgstripfiles: waiting for lock (python-dolfin) ... INFO: pkgstripfiles: waiting for lock (dolfin-bin) ... INFO: pkgstripfiles: waiting for lock (python-dolfin) ... INFO: pkgstripfiles: waiting for lock (dolfin-bin) ... pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/libdolfin2018.1/DEBIAN/control, package libdolfin2018.1, directory debian/libdolfin2018.1 pkgstripfiles: Truncating usr/share/doc/libdolfin2018.1/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package libdolfin2018.1 ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libdolfin2018.1' in '../libdolfin2018.1_2018.1.0.post1-13_amd64.deb'. INFO: pkgstripfiles: waiting for lock (python-dolfin) ... INFO: pkgstripfiles: waiting for lock (dolfin-bin) ... INFO: pkgstripfiles: waiting for lock (python-dolfin) ... INFO: pkgstripfiles: waiting for lock (dolfin-bin) ... INFO: pkgstripfiles: waiting for lock (python-dolfin) ... INFO: pkgstripfiles: waiting for lock (dolfin-bin) ... 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Searching for duplicated docs in dependency python3-dolfin... symlinking changelog.Debian.gz in dolfin-bin to file in libdolfin2018.1 pkgstripfiles: Running PNG optimization (using 4 cpus) for package dolfin-bin ... pkgstripfiles: No PNG files. dpkg-deb: building package 'dolfin-bin' in '../dolfin-bin_2018.1.0.post1-13_all.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary -mLaunchpad Build Daemon >../dolfin_2018.1.0.post1-13_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20181226-1854 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ dolfin_2018.1.0.post1-13_amd64.changes: --------------------------------------- Format: 1.8 Date: Wed, 26 Dec 2018 09:14:38 +0100 Source: dolfin Binary: libdolfin-dev libdolfin2018.1 python3-dolfin python-dolfin dolfin-doc dolfin-bin Architecture: all amd64 Version: 2018.1.0.post1-13 Distribution: disco-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Drew Parsons Description: dolfin-bin - Executable scripts for DOLFIN dolfin-doc - Documentation and demo programs for DOLFIN libdolfin-dev - Shared links and header files for DOLFIN libdolfin2018.1 - Shared libraries for DOLFIN python-dolfin - Python interface for DOLFIN python3-dolfin - Python interface for DOLFIN (Python 3) Changes: dolfin (2018.1.0.post1-13) unstable; urgency=medium . * Standards-Version: 4.3.0 * create patch PETSc_3.10_SNESTEST_removed.patch to work with PETSc 3.10 (SNESTEST has been removed). Thanks Jed Brown. 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Key features include a simple, consistent and intuitive object-oriented API; automatic and efficient evaluation of variational forms; automatic and efficient assembly of linear systems; and support for general families of finite elements. . This package contains executable scripts for DOLFIN. drwxr-xr-x root/root 0 2018-12-26 08:14 ./ drwxr-xr-x root/root 0 2018-12-26 08:14 ./usr/ drwxr-xr-x root/root 0 2018-12-26 08:14 ./usr/bin/ -rwxr-xr-x root/root 3744 2018-12-26 08:14 ./usr/bin/dolfin-convert -rwxr-xr-x root/root 1054 2018-12-26 08:14 ./usr/bin/dolfin-get-demos -rwxr-xr-x root/root 1710 2018-12-26 08:14 ./usr/bin/dolfin-order -rwxr-xr-x root/root 3696 2018-12-26 08:14 ./usr/bin/dolfin-plot -rwxr-xr-x root/root 74 2018-12-26 08:14 ./usr/bin/dolfin-version drwxr-xr-x root/root 0 2018-12-26 08:14 ./usr/share/ drwxr-xr-x root/root 0 2018-12-26 08:14 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-12-26 08:14 ./usr/share/doc/dolfin-bin/ lrwxrwxrwx root/root 0 2018-12-26 08:14 ./usr/share/doc/dolfin-bin/changelog.Debian.gz -> ../libdolfin2018.1/changelog.Debian.gz -rw-r--r-- root/root 11533 2018-12-26 08:14 ./usr/share/doc/dolfin-bin/copyright drwxr-xr-x root/root 0 2018-12-26 08:14 ./usr/share/man/ drwxr-xr-x root/root 0 2018-12-26 08:14 ./usr/share/man/man1/ -rw-r--r-- root/root 772 2018-12-26 08:14 ./usr/share/man/man1/dolfin-convert.1.gz -rw-r--r-- root/root 237 2018-12-26 08:14 ./usr/share/man/man1/dolfin-get-demos.1.gz -rw-r--r-- root/root 290 2018-12-26 08:14 ./usr/share/man/man1/dolfin-order.1.gz -rw-r--r-- root/root 307 2018-12-26 08:14 ./usr/share/man/man1/dolfin-plot.1.gz -rw-r--r-- root/root 219 2018-12-26 08:14 ./usr/share/man/man1/dolfin-version.1.gz dolfin-doc_2018.1.0.post1-13_all.deb ------------------------------------ new debian package, version 2.0. size 4095436 bytes: control archive=9708 bytes. 1046 bytes, 22 lines control 37885 bytes, 366 lines md5sums Package: dolfin-doc Source: dolfin Version: 2018.1.0.post1-13 Architecture: all Maintainer: Ubuntu Developers Original-Maintainer: Debian Science Team Installed-Size: 21621 Depends: libdolfin-dev (>= 2018.1.0.post1-13), python3-dolfin (>= 2018.1.0.post1-13) Suggests: cmake (>= 2.8.0) Section: doc Priority: optional Homepage: http://fenicsproject.org Description: Documentation and demo programs for DOLFIN DOLFIN is the Python and C++ interface of the FEniCS project for the automated solution of differential equations, providing a consistent PSE (Problem Solving Environment) for solving ordinary and partial differential equations. Key features include a simple, consistent and intuitive object-oriented API; automatic and efficient evaluation of variational forms; automatic and efficient assembly of linear systems; and support for general families of finite elements. . 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22300 bytes, 299 lines md5sums Package: libdolfin-dev Source: dolfin Version: 2018.1.0.post1-13 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Science Team Installed-Size: 1587 Depends: cmake (>= 2.8.0), libboost-chrono-dev, libboost-dev, libboost-filesystem-dev, libboost-iostreams-dev, libboost-math-dev, libboost-mpi-dev, libboost-program-options-dev, libboost-serialization-dev, libboost-thread-dev, libboost-timer-dev, libdolfin2018.1 (= 2018.1.0.post1-13), libeigen3-dev, libhdf5-mpi-dev, libsuitesparse-dev, libscotch-dev, libxml2-dev, pkg-config, python3-ffc (>= 2018.1), python3-ffc (<< 2018.2~), libpetsc-real3.10-dev | libpetsc3.10.3-dev, libslepc-real3.10-dev | libslepc3.10.1-dev Conflicts: libdolfin0-dev, libdolfin1.0-dev, libdolfin1.1-dev, libdolfin1.2-dev, libdolfin1.3-dev, libdolfin1.4-dev Replaces: libdolfin0-dev, libdolfin1.0-dev, libdolfin1.1-dev, libdolfin1.2-dev, libdolfin1.3-dev, libdolfin1.4-dev Section: libdevel Priority: optional Homepage: http://fenicsproject.org Description: Shared links and header files for DOLFIN DOLFIN is the Python and C++ interface of the FEniCS project for the automated solution of differential equations, providing a consistent PSE (Problem Solving Environment) for solving ordinary and partial differential equations. Key features include a simple, consistent and intuitive object-oriented API; automatic and efficient evaluation of variational forms; automatic and efficient assembly of linear systems; and support for general families of finite elements. . 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./usr/share/dolfin/cmake/UseDOLFIN.cmake libdolfin2018.1_2018.1.0.post1-13_amd64.deb ------------------------------------------- new debian package, version 2.0. size 1686500 bytes: control archive=1216 bytes. 1326 bytes, 23 lines control 239 bytes, 3 lines md5sums 33 bytes, 1 lines shlibs 70 bytes, 2 lines triggers Package: libdolfin2018.1 Source: dolfin Version: 2018.1.0.post1-13 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Science Team Installed-Size: 6018 Depends: libboost-filesystem1.67.0, libboost-iostreams1.67.0, libboost-program-options1.67.0, libboost-system1.67.0, libboost-timer1.67.0, libc6 (>= 2.14), libcholmod3 (>= 1:4.5.2), libgcc1 (>= 1:3.0), libhdf5-openmpi-103 (>= 1.10.3), libopenmpi3, libpetsc-real3.10, libptscotch-6.0, libslepc-real3.10, libstdc++6 (>= 6), libumfpack5 (>= 1:4.5.2), zlib1g (>= 1:1.1.4) Suggests: dolfin-doc, python3-dolfin Section: libs Priority: optional Multi-Arch: same Homepage: http://fenicsproject.org Description: Shared libraries for DOLFIN DOLFIN is the Python and C++ interface of the FEniCS project for the automated solution of differential equations, providing a consistent PSE (Problem Solving Environment) for solving ordinary and partial differential equations. Key features include a simple, consistent and intuitive object-oriented API; automatic and efficient evaluation of variational forms; automatic and efficient assembly of linear systems; and support for general families of finite elements. . This package contains the shared libraries. drwxr-xr-x root/root 0 2018-12-26 08:14 ./ drwxr-xr-x root/root 0 2018-12-26 08:14 ./usr/ drwxr-xr-x root/root 0 2018-12-26 08:14 ./usr/lib/ drwxr-xr-x root/root 0 2018-12-26 08:14 ./usr/lib/x86_64-linux-gnu/ lrwxrwxrwx root/root 0 2018-12-26 08:14 ./usr/lib/x86_64-linux-gnu/libdolfin.so.2018.1 -> libdolfin.so.2018.1.0 -rw-r--r-- root/root 6127504 2018-12-26 08:14 ./usr/lib/x86_64-linux-gnu/libdolfin.so.2018.1.0 drwxr-xr-x root/root 0 2018-12-26 08:14 ./usr/share/ drwxr-xr-x root/root 0 2018-12-26 08:14 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-12-26 08:14 ./usr/share/doc/libdolfin2018.1/ -rw-r--r-- root/root 1012 2018-12-26 08:14 ./usr/share/doc/libdolfin2018.1/changelog.Debian.gz -rw-r--r-- root/root 11533 2018-12-26 08:14 ./usr/share/doc/libdolfin2018.1/copyright python-dolfin_2018.1.0.post1-13_all.deb --------------------------------------- new debian package, version 2.0. size 5160 bytes: control archive=904 bytes. 987 bytes, 22 lines control 148 bytes, 2 lines md5sums Package: python-dolfin Source: dolfin Version: 2018.1.0.post1-13 Architecture: all Maintainer: Ubuntu Developers Original-Maintainer: Debian Science Team Installed-Size: 32 Depends: python3-dolfin (>= 2018.1) Section: python Priority: optional Homepage: http://fenicsproject.org Description: Python interface for DOLFIN DOLFIN is the Python and C++ interface of the FEniCS project for the automated solution of differential equations, providing a consistent PSE (Problem Solving Environment) for solving ordinary and partial differential equations. Key features include a simple, consistent and intuitive object-oriented API; automatic and efficient evaluation of variational forms; automatic and efficient assembly of linear systems; and support for general families of finite elements. . This is a dummy package that depends on python3-dolfin. (DOLFIN no longer supports Python 2). drwxr-xr-x root/root 0 2018-12-26 08:14 ./ drwxr-xr-x root/root 0 2018-12-26 08:14 ./usr/ drwxr-xr-x root/root 0 2018-12-26 08:14 ./usr/share/ drwxr-xr-x root/root 0 2018-12-26 08:14 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-12-26 08:14 ./usr/share/doc/python-dolfin/ lrwxrwxrwx root/root 0 2018-12-26 08:14 ./usr/share/doc/python-dolfin/changelog.Debian.gz -> ../libdolfin2018.1/changelog.Debian.gz -rw-r--r-- root/root 11533 2018-12-26 08:14 ./usr/share/doc/python-dolfin/copyright drwxr-xr-x root/root 0 2018-12-26 08:14 ./usr/share/lintian/ drwxr-xr-x root/root 0 2018-12-26 08:14 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 182 2018-12-26 08:14 ./usr/share/lintian/overrides/python-dolfin python3-dolfin_2018.1.0.post1-13_amd64.deb ------------------------------------------ new debian package, version 2.0. size 749988 bytes: control archive=3144 bytes. 1625 bytes, 22 lines control 5886 bytes, 63 lines md5sums 254 bytes, 12 lines * postinst #!/bin/sh 403 bytes, 12 lines * prerm #!/bin/sh 48 bytes, 1 lines shlibs 70 bytes, 2 lines triggers Package: python3-dolfin Source: dolfin Version: 2018.1.0.post1-13 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Science Team Installed-Size: 3844 Depends: libdolfin-dev (= 2018.1.0.post1-13), libdolfin2018.1 (= 2018.1.0.post1-13), python3-dijitso (>= 2018.1), python3-dijitso (<< 2018.2~), python3-ffc (>= 2018.1), python3-ffc (<< 2018.2~), python3-ufl (>= 2018.1), python3-ufl (<< 2018.2~), python3-numpy (>= 1:1.14.3), python3-ply, python3-pybind11 (>= 2.2.4), python3-pybind11 (<< 2.2.5), python3-six, python3-sympy, python3-petsc4py (>= 3.10), python3-petsc4py (<< 3.11), python3-slepc4py (>= 3.10), python3-slepc4py (<< 3.11), python3-numpy-abi9, python3 (<< 3.8), python3 (>= 3.7~), python3-pkgconfig, python3:any, libc6 (>= 2.14), libgcc1 (>= 1:3.3.1), libopenmpi3, libpetsc-real3.10, libstdc++6 (>= 5.2) Suggests: dolfin-doc Section: python Priority: optional Homepage: http://fenicsproject.org Description: Python interface for DOLFIN (Python 3) DOLFIN is the Python and C++ interface of the FEniCS project for the automated solution of differential equations, providing a consistent PSE (Problem Solving Environment) for solving ordinary and partial differential equations. Key features include a simple, consistent and intuitive object-oriented API; automatic and efficient evaluation of variational forms; automatic and efficient assembly of linear systems; and support for general families of finite elements. . 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+------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build-Space: 3290736 Build-Time: 6025 Distribution: disco-proposed Host Architecture: amd64 Install-Time: 180 Job: dolfin_2018.1.0.post1-13.dsc Machine Architecture: amd64 Package: dolfin Package-Time: 6208 Source-Version: 2018.1.0.post1-13 Space: 3290736 Status: successful Version: 2018.1.0.post1-13 -------------------------------------------------------------------------------- Finished at 20181226-1854 Build needed 01:43:28, 3290736k disc space RUN: /usr/share/launchpad-buildd/slavebin/in-target scan-for-processes --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-16205858 Scanning for processes to kill in build PACKAGEBUILD-16205858