exonerate 2.2.0-2 source package in Ubuntu
Changelog
exonerate (2.2.0-2) unstable; urgency=low
[ Charles Plessy ]
* debian/control:
- Enhances bioperl-run instead of bioperl.
- Incremented Standards-Version to reflect conformance with Policy
3.8.3 (no changes needed).
[ Andreas Tille ]
* debian/control
- s/libreadline5-dev/libreadline-dev/
- s/Debian-Med/Debian Med/
-- Ubuntu Archive Auto-Sync <email address hidden> Thu, 05 Nov 2009 05:57:30 +0000
Upload details
- Uploaded by:
- Ubuntu Archive Auto-Sync
- Uploaded to:
- Lucid
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- science
- Urgency:
- Low Urgency
See full publishing history Publishing
| Series | Published | Component | Section |
|---|
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| exonerate_2.2.0.orig.tar.gz | 497.9 KiB | 0ea2720b1388fa329f889522f43029b416ae311f57b229129a65e779616fe5ff |
| exonerate_2.2.0-2.diff.gz | 4.5 KiB | b083725c098f1a72cb0bf2ae8989aca10c443f9ff36075a741d69103309a777f |
| exonerate_2.2.0-2.dsc | 1.4 KiB | 6373b2fae788b4f51864f48b0c9406b3e776402dffc18a402d2ecaa1ffba9e19 |
Available diffs
- diff from 2.2.0-1 to 2.2.0-2 (1.2 KiB)
Binary packages built by this source
- exonerate: generic tool for pairwise sequence comparison
Exonerate allows you to align sequences using a many alignment models, using
either exhaustive dynamic programming, or a variety of heuristics. Much of
the functionality of the Wise dynamic programming suite was reimplemented in C
for better efficiency. Exonerate is an intrinsic component of the building of
the Ensembl genome databases, providing similarity scores between RNA and DNA
sequences and thus determining splice variants and coding sequences in
general.
.
An In-silico PCR Experiment Simulation System (see the ipcress man page) is
packaged with exonerate.
.
This package also comes with a selection of utilities for performing
simple manipulations quickly on fasta files beyond 2Gb
