https://launchpad.net/ubuntu/+source/fastaq/3.17.0-3/+build/19214428 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux lgw01-amd64-049 4.4.0-177-generic #207-Ubuntu SMP Mon Mar 16 01:16:10 UTC 2020 x86_64 Buildd toolchain package versions: launchpad-buildd_189 python-lpbuildd_189 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.8 dpkg-dev_1.18.4ubuntu1.6 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 27 Apr 19:35:56 ntpdate[1903]: adjust time server 10.211.37.1 offset -0.000342 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=groovy --arch=amd64 PACKAGEBUILD-19214428 --image-type chroot /home/buildd/filecache-default/7f6882774d93a6ce12d34cd2f4e4b83a707bcc6e Creating target for build PACKAGEBUILD-19214428 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=groovy --arch=amd64 PACKAGEBUILD-19214428 Starting target for build PACKAGEBUILD-19214428 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=groovy --arch=amd64 PACKAGEBUILD-19214428 'deb http://ftpmaster.internal/ubuntu groovy main universe' 'deb http://ftpmaster.internal/ubuntu groovy-security main universe' 'deb http://ftpmaster.internal/ubuntu groovy-updates main universe' 'deb http://ftpmaster.internal/ubuntu groovy-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-19214428 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=groovy --arch=amd64 PACKAGEBUILD-19214428 Updating target for build PACKAGEBUILD-19214428 Get:1 http://ftpmaster.internal/ubuntu groovy InRelease [268 kB] Get:2 http://ftpmaster.internal/ubuntu groovy-security InRelease [89.1 kB] Get:3 http://ftpmaster.internal/ubuntu groovy-updates InRelease [89.1 kB] Get:4 http://ftpmaster.internal/ubuntu groovy-proposed InRelease [109 kB] Get:5 http://ftpmaster.internal/ubuntu groovy/main amd64 Packages [970 kB] Get:6 http://ftpmaster.internal/ubuntu groovy/main Translation-en [506 kB] Get:7 http://ftpmaster.internal/ubuntu groovy/universe amd64 Packages [8632 kB] Get:8 http://ftpmaster.internal/ubuntu groovy/universe Translation-en [5124 kB] Get:9 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 Packages [40.0 kB] Get:10 http://ftpmaster.internal/ubuntu groovy-proposed/main Translation-en [20.4 kB] Get:11 http://ftpmaster.internal/ubuntu groovy-proposed/universe amd64 Packages [198 kB] Get:12 http://ftpmaster.internal/ubuntu groovy-proposed/universe Translation-en [118 kB] Fetched 16.2 MB in 2s (7722 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: base-files cpp-9 g++-9 gcc-10-base gcc-9 gcc-9-base libasan5 libatomic1 libcap2 libcc1-0 libgcc-9-dev libgcc-s1 libgomp1 libidn2-0 libitm1 liblsan0 libncurses6 libncursesw6 libquadmath0 libstdc++-9-dev libstdc++6 libtinfo6 libtsan0 libubsan1 ncurses-base ncurses-bin 26 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 30.7 MB of archives. After this operation, 27.6 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu groovy/main amd64 base-files amd64 11ubuntu6 [60.0 kB] Get:2 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 ncurses-bin amd64 6.2-1 [172 kB] Get:3 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 ncurses-base all 6.2-1 [18.7 kB] Get:4 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libubsan1 amd64 10-20200425-1ubuntu2 [136 kB] Get:5 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libtsan0 amd64 10-20200425-1ubuntu2 [319 kB] Get:6 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 gcc-10-base amd64 10-20200425-1ubuntu2 [19.3 kB] Get:7 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libstdc++6 amd64 10-20200425-1ubuntu2 [503 kB] Get:8 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libquadmath0 amd64 10-20200425-1ubuntu2 [146 kB] Get:9 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 liblsan0 amd64 10-20200425-1ubuntu2 [144 kB] Get:10 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libitm1 amd64 10-20200425-1ubuntu2 [26.4 kB] Get:11 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libgomp1 amd64 10-20200425-1ubuntu2 [101 kB] Get:12 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libcc1-0 amd64 10-20200425-1ubuntu2 [41.2 kB] Get:13 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libatomic1 amd64 10-20200425-1ubuntu2 [9276 B] Get:14 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libgcc-s1 amd64 10-20200425-1ubuntu2 [41.5 kB] Get:15 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libncursesw6 amd64 6.2-1 [132 kB] Get:16 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libncurses6 amd64 6.2-1 [101 kB] Get:17 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libtinfo6 amd64 6.2-1 [87.1 kB] Get:18 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libidn2-0 amd64 2.3.0-1 [52.6 kB] Get:19 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libcap2 amd64 1:2.33-1 [17.8 kB] Get:20 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libasan5 amd64 9.3.0-11ubuntu2 [395 kB] Get:21 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 g++-9 amd64 9.3.0-11ubuntu2 [8406 kB] Get:22 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 gcc-9 amd64 9.3.0-11ubuntu2 [8237 kB] Get:23 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libstdc++-9-dev amd64 9.3.0-11ubuntu2 [1713 kB] Get:24 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libgcc-9-dev amd64 9.3.0-11ubuntu2 [2359 kB] Get:25 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 cpp-9 amd64 9.3.0-11ubuntu2 [7490 kB] Get:26 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 gcc-9-base amd64 9.3.0-11ubuntu2 [19.4 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 30.7 MB in 1s (40.8 MB/s) (Reading database ... 12816 files and directories currently installed.) Preparing to unpack .../base-files_11ubuntu6_amd64.deb ... Unpacking base-files (11ubuntu6) over (11ubuntu5) ... Setting up base-files (11ubuntu6) ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... (Reading database ... 12816 files and directories currently installed.) Preparing to unpack .../ncurses-bin_6.2-1_amd64.deb ... Unpacking ncurses-bin (6.2-1) over (6.2-0ubuntu2) ... Setting up ncurses-bin (6.2-1) ... (Reading database ... 12816 files and directories currently installed.) Preparing to unpack .../ncurses-base_6.2-1_all.deb ... Unpacking ncurses-base (6.2-1) over (6.2-0ubuntu2) ... Setting up ncurses-base (6.2-1) ... (Reading database ... 12816 files and directories currently installed.) Preparing to unpack .../libubsan1_10-20200425-1ubuntu2_amd64.deb ... Unpacking libubsan1:amd64 (10-20200425-1ubuntu2) over (10-20200411-0ubuntu1) ... Preparing to unpack .../libtsan0_10-20200425-1ubuntu2_amd64.deb ... Unpacking libtsan0:amd64 (10-20200425-1ubuntu2) over (10-20200411-0ubuntu1) ... Preparing to unpack .../gcc-10-base_10-20200425-1ubuntu2_amd64.deb ... Unpacking gcc-10-base:amd64 (10-20200425-1ubuntu2) over (10-20200411-0ubuntu1) ... Setting up gcc-10-base:amd64 (10-20200425-1ubuntu2) ... (Reading database ... 12816 files and directories currently installed.) Preparing to unpack .../libstdc++6_10-20200425-1ubuntu2_amd64.deb ... Unpacking libstdc++6:amd64 (10-20200425-1ubuntu2) over (10-20200411-0ubuntu1) ... Setting up libstdc++6:amd64 (10-20200425-1ubuntu2) ... (Reading database ... 12816 files and directories currently installed.) Preparing to unpack .../0-libquadmath0_10-20200425-1ubuntu2_amd64.deb ... Unpacking libquadmath0:amd64 (10-20200425-1ubuntu2) over (10-20200411-0ubuntu1) ... Preparing to unpack .../1-liblsan0_10-20200425-1ubuntu2_amd64.deb ... Unpacking liblsan0:amd64 (10-20200425-1ubuntu2) over (10-20200411-0ubuntu1) ... Preparing to unpack .../2-libitm1_10-20200425-1ubuntu2_amd64.deb ... Unpacking libitm1:amd64 (10-20200425-1ubuntu2) over (10-20200411-0ubuntu1) ... Preparing to unpack .../3-libgomp1_10-20200425-1ubuntu2_amd64.deb ... Unpacking libgomp1:amd64 (10-20200425-1ubuntu2) over (10-20200411-0ubuntu1) ... Preparing to unpack .../4-libcc1-0_10-20200425-1ubuntu2_amd64.deb ... Unpacking libcc1-0:amd64 (10-20200425-1ubuntu2) over (10-20200411-0ubuntu1) ... Preparing to unpack .../5-libatomic1_10-20200425-1ubuntu2_amd64.deb ... Unpacking libatomic1:amd64 (10-20200425-1ubuntu2) over (10-20200411-0ubuntu1) ... Preparing to unpack .../6-libgcc-s1_10-20200425-1ubuntu2_amd64.deb ... Unpacking libgcc-s1:amd64 (10-20200425-1ubuntu2) over (10-20200411-0ubuntu1) ... Setting up libgcc-s1:amd64 (10-20200425-1ubuntu2) ... (Reading database ... 12816 files and directories currently installed.) Preparing to unpack .../libncursesw6_6.2-1_amd64.deb ... Unpacking libncursesw6:amd64 (6.2-1) over (6.2-0ubuntu2) ... Preparing to unpack .../libncurses6_6.2-1_amd64.deb ... Unpacking libncurses6:amd64 (6.2-1) over (6.2-0ubuntu2) ... Preparing to unpack .../libtinfo6_6.2-1_amd64.deb ... Unpacking libtinfo6:amd64 (6.2-1) over (6.2-0ubuntu2) ... Setting up libtinfo6:amd64 (6.2-1) ... (Reading database ... 12816 files and directories currently installed.) Preparing to unpack .../libidn2-0_2.3.0-1_amd64.deb ... Unpacking libidn2-0:amd64 (2.3.0-1) over (2.2.0-2) ... Setting up libidn2-0:amd64 (2.3.0-1) ... (Reading database ... 12816 files and directories currently installed.) Preparing to unpack .../0-libcap2_1%3a2.33-1_amd64.deb ... Unpacking libcap2:amd64 (1:2.33-1) over (1:2.32-1) ... Preparing to unpack .../1-libasan5_9.3.0-11ubuntu2_amd64.deb ... Unpacking libasan5:amd64 (9.3.0-11ubuntu2) over (9.3.0-10ubuntu2) ... Preparing to unpack .../2-g++-9_9.3.0-11ubuntu2_amd64.deb ... Unpacking g++-9 (9.3.0-11ubuntu2) over (9.3.0-10ubuntu2) ... Preparing to unpack .../3-gcc-9_9.3.0-11ubuntu2_amd64.deb ... Unpacking gcc-9 (9.3.0-11ubuntu2) over (9.3.0-10ubuntu2) ... Preparing to unpack .../4-libstdc++-9-dev_9.3.0-11ubuntu2_amd64.deb ... Unpacking libstdc++-9-dev:amd64 (9.3.0-11ubuntu2) over (9.3.0-10ubuntu2) ... Preparing to unpack .../5-libgcc-9-dev_9.3.0-11ubuntu2_amd64.deb ... Unpacking libgcc-9-dev:amd64 (9.3.0-11ubuntu2) over (9.3.0-10ubuntu2) ... Preparing to unpack .../6-cpp-9_9.3.0-11ubuntu2_amd64.deb ... Unpacking cpp-9 (9.3.0-11ubuntu2) over (9.3.0-10ubuntu2) ... Preparing to unpack .../7-gcc-9-base_9.3.0-11ubuntu2_amd64.deb ... Unpacking gcc-9-base:amd64 (9.3.0-11ubuntu2) over (9.3.0-10ubuntu2) ... Setting up libgomp1:amd64 (10-20200425-1ubuntu2) ... Setting up libcap2:amd64 (1:2.33-1) ... Setting up libncurses6:amd64 (6.2-1) ... Setting up libquadmath0:amd64 (10-20200425-1ubuntu2) ... Setting up libatomic1:amd64 (10-20200425-1ubuntu2) ... Setting up libncursesw6:amd64 (6.2-1) ... Setting up libubsan1:amd64 (10-20200425-1ubuntu2) ... Setting up libcc1-0:amd64 (10-20200425-1ubuntu2) ... Setting up liblsan0:amd64 (10-20200425-1ubuntu2) ... Setting up libitm1:amd64 (10-20200425-1ubuntu2) ... Setting up gcc-9-base:amd64 (9.3.0-11ubuntu2) ... Setting up libtsan0:amd64 (10-20200425-1ubuntu2) ... Setting up libasan5:amd64 (9.3.0-11ubuntu2) ... Setting up cpp-9 (9.3.0-11ubuntu2) ... Setting up libgcc-9-dev:amd64 (9.3.0-11ubuntu2) ... Setting up gcc-9 (9.3.0-11ubuntu2) ... Setting up libstdc++-9-dev:amd64 (9.3.0-11ubuntu2) ... Setting up g++-9 (9.3.0-11ubuntu2) ... Processing triggers for libc-bin (2.31-0ubuntu9) ... RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-19214428 amd64 groovy-proposed -c chroot:build-PACKAGEBUILD-19214428 --arch=amd64 --dist=groovy-proposed --nolog -A fastaq_3.17.0-3.dsc Initiating build PACKAGEBUILD-19214428 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-177-generic #207-Ubuntu SMP Mon Mar 16 01:16:10 UTC 2020 x86_64 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on lgw01-amd64-049.buildd +==============================================================================+ | fastaq 3.17.0-3 (amd64) 27 Apr 2020 19:36 | +==============================================================================+ Package: fastaq Version: 3.17.0-3 Source Version: 3.17.0-3 Distribution: groovy-proposed Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 I: NOTICE: Log filtering will replace 'build/fastaq-pTVW2l/fastaq-3.17.0' with '<>' I: NOTICE: Log filtering will replace 'build/fastaq-pTVW2l' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-19214428/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- fastaq_3.17.0-3.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-hcSOT5/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-hcSOT5/apt_archive ./ InRelease Get:2 copy:/<>/resolver-hcSOT5/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-hcSOT5/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-hcSOT5/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-hcSOT5/apt_archive ./ Packages [527 B] Fetched 2860 B in 0s (194 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-hcSOT5/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 12816 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper-compat (= 12), dh-python, python3, python3-setuptools, python3-pkg-resources, python3-nose, samtools, help2man Filtered Build-Depends: debhelper-compat (= 12), dh-python, python3, python3-setuptools, python3-pkg-resources, python3-nose, samtools, help2man dpkg-deb: building package 'sbuild-build-depends-fastaq-dummy' in '/<>/resolver-Za58n4/apt_archive/sbuild-build-depends-fastaq-dummy.deb'. Ign:1 copy:/<>/resolver-Za58n4/apt_archive ./ InRelease Get:2 copy:/<>/resolver-Za58n4/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-Za58n4/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-Za58n4/apt_archive ./ Sources [258 B] Get:5 copy:/<>/resolver-Za58n4/apt_archive ./ Packages [578 B] Fetched 2955 B in 0s (249 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install fastaq build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libasn1-8-heimdal libbrotli1 libbsd0 libcroco3 libcurl3-gnutls libdebhelper-perl libdeflate0 libelf1 libexpat1 libfile-stripnondeterminism-perl libglib2.0-0 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhts3 libhx509-5-heimdal libicu66 libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common liblocale-gettext-perl libmagic-mgc libmagic1 libmpdec2 libnghttp2-14 libpipeline1 libpsl5 libpython3-stdlib libpython3.8-minimal libpython3.8-stdlib libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh-4 libsub-override-perl libtool libuchardet0 libwind0-heimdal libxml2 m4 man-db mime-support po-debconf python3 python3-distutils python3-lib2to3 python3-minimal python3-nose python3-pkg-resources python3-setuptools python3.8 python3.8-minimal samtools Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff krb5-doc krb5-user libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl python3-doc python3-tk python3-venv python-nose-doc python-setuptools-doc python3.8-venv python3.8-doc binfmt-support Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs krb5-locales publicsuffix libsasl2-modules libltdl-dev libmail-sendmail-perl cwltool The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libasn1-8-heimdal libbrotli1 libbsd0 libcroco3 libcurl3-gnutls libdebhelper-perl libdeflate0 libelf1 libexpat1 libfile-stripnondeterminism-perl libglib2.0-0 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhts3 libhx509-5-heimdal libicu66 libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common liblocale-gettext-perl libmagic-mgc libmagic1 libmpdec2 libnghttp2-14 libpipeline1 libpsl5 libpython3-stdlib libpython3.8-minimal libpython3.8-stdlib libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh-4 libsub-override-perl libtool libuchardet0 libwind0-heimdal libxml2 m4 man-db mime-support po-debconf python3 python3-distutils python3-lib2to3 python3-minimal python3-nose python3-pkg-resources python3-setuptools python3.8 python3.8-minimal samtools sbuild-build-depends-fastaq-dummy 0 upgraded, 79 newly installed, 0 to remove and 0 not upgraded. Need to get 26.6 MB of archives. After this operation, 103 MB of additional disk space will be used. Get:1 copy:/<>/resolver-Za58n4/apt_archive ./ sbuild-build-depends-fastaq-dummy 0.invalid.0 [904 B] Get:2 http://ftpmaster.internal/ubuntu groovy/main amd64 liblocale-gettext-perl amd64 1.07-4 [17.1 kB] Get:3 http://ftpmaster.internal/ubuntu groovy/main amd64 libpython3.8-minimal amd64 3.8.2-1ubuntu1 [705 kB] Get:4 http://ftpmaster.internal/ubuntu groovy/main amd64 libexpat1 amd64 2.2.9-1build1 [73.3 kB] Get:5 http://ftpmaster.internal/ubuntu groovy/main amd64 python3.8-minimal amd64 3.8.2-1ubuntu1 [1897 kB] Get:6 http://ftpmaster.internal/ubuntu groovy/main amd64 python3-minimal amd64 3.8.2-0ubuntu2 [23.6 kB] Get:7 http://ftpmaster.internal/ubuntu groovy/main amd64 mime-support all 3.64ubuntu1 [30.6 kB] Get:8 http://ftpmaster.internal/ubuntu groovy/main amd64 libmpdec2 amd64 2.4.2-3 [81.1 kB] Get:9 http://ftpmaster.internal/ubuntu groovy/main amd64 libpython3.8-stdlib amd64 3.8.2-1ubuntu1 [1668 kB] Get:10 http://ftpmaster.internal/ubuntu groovy/main amd64 python3.8 amd64 3.8.2-1ubuntu1 [364 kB] Get:11 http://ftpmaster.internal/ubuntu groovy/main amd64 libpython3-stdlib amd64 3.8.2-0ubuntu2 [7068 B] Get:12 http://ftpmaster.internal/ubuntu groovy/main amd64 python3 amd64 3.8.2-0ubuntu2 [47.6 kB] Get:13 http://ftpmaster.internal/ubuntu groovy/main amd64 libbsd0 amd64 0.10.0-1 [45.4 kB] Get:14 http://ftpmaster.internal/ubuntu groovy/main amd64 bsdmainutils amd64 11.1.2ubuntu3 [181 kB] Get:15 http://ftpmaster.internal/ubuntu groovy/main amd64 libuchardet0 amd64 0.0.6-3build1 [65.2 kB] Get:16 http://ftpmaster.internal/ubuntu groovy/main amd64 groff-base amd64 1.22.4-4build1 [847 kB] Get:17 http://ftpmaster.internal/ubuntu groovy/main amd64 libpipeline1 amd64 1.5.2-2build1 [27.7 kB] Get:18 http://ftpmaster.internal/ubuntu groovy/main amd64 man-db amd64 2.9.1-1 [1112 kB] Get:19 http://ftpmaster.internal/ubuntu groovy/main amd64 libmagic-mgc amd64 1:5.38-4 [218 kB] Get:20 http://ftpmaster.internal/ubuntu groovy/main amd64 libmagic1 amd64 1:5.38-4 [75.9 kB] Get:21 http://ftpmaster.internal/ubuntu groovy/main amd64 file amd64 1:5.38-4 [23.3 kB] Get:22 http://ftpmaster.internal/ubuntu groovy/main amd64 libelf1 amd64 0.176-1.1build1 [44.0 kB] Get:23 http://ftpmaster.internal/ubuntu groovy/main amd64 libglib2.0-0 amd64 2.64.2-1~fakesync1 [1284 kB] Get:24 http://ftpmaster.internal/ubuntu groovy/main amd64 libicu66 amd64 66.1-2ubuntu2 [8520 kB] Get:25 http://ftpmaster.internal/ubuntu groovy/main amd64 libxml2 amd64 2.9.10+dfsg-5 [640 kB] Get:26 http://ftpmaster.internal/ubuntu groovy/main amd64 python3-pkg-resources all 45.2.0-1 [130 kB] Get:27 http://ftpmaster.internal/ubuntu groovy/main amd64 gettext-base amd64 0.19.8.1-10build1 [50.2 kB] Get:28 http://ftpmaster.internal/ubuntu groovy/main amd64 libkrb5support0 amd64 1.17-6ubuntu4 [30.9 kB] Get:29 http://ftpmaster.internal/ubuntu groovy/main amd64 libk5crypto3 amd64 1.17-6ubuntu4 [80.2 kB] Get:30 http://ftpmaster.internal/ubuntu groovy/main amd64 libkeyutils1 amd64 1.6.1-2ubuntu1 [10.1 kB] 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amd64 dh-autoreconf all 19 [16.1 kB] Get:42 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libdebhelper-perl all 13ubuntu1 [62.5 kB] Get:43 http://ftpmaster.internal/ubuntu groovy/main amd64 libarchive-zip-perl all 1.68-1 [90.2 kB] Get:44 http://ftpmaster.internal/ubuntu groovy/main amd64 libsub-override-perl all 0.09-2 [9532 B] Get:45 http://ftpmaster.internal/ubuntu groovy/main amd64 libfile-stripnondeterminism-perl all 1.7.0-1 [15.9 kB] Get:46 http://ftpmaster.internal/ubuntu groovy/main amd64 dh-strip-nondeterminism all 1.7.0-1 [5228 B] Get:47 http://ftpmaster.internal/ubuntu groovy/main amd64 dwz amd64 0.13-5 [151 kB] Get:48 http://ftpmaster.internal/ubuntu groovy/main amd64 libcroco3 amd64 0.6.13-1 [82.5 kB] Get:49 http://ftpmaster.internal/ubuntu groovy/main amd64 gettext amd64 0.19.8.1-10build1 [895 kB] Get:50 http://ftpmaster.internal/ubuntu groovy/main amd64 intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:51 http://ftpmaster.internal/ubuntu groovy/main amd64 po-debconf all 1.0.21 [233 kB] Get:52 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 debhelper all 13ubuntu1 [877 kB] Get:53 http://ftpmaster.internal/ubuntu groovy/main amd64 python3-lib2to3 all 3.8.2-1ubuntu1 [74.1 kB] Get:54 http://ftpmaster.internal/ubuntu groovy/main amd64 python3-distutils all 3.8.2-1ubuntu1 [140 kB] Get:55 http://ftpmaster.internal/ubuntu groovy-proposed/universe amd64 dh-python all 4.20200315 [85.8 kB] Get:56 http://ftpmaster.internal/ubuntu groovy/universe amd64 help2man amd64 1.47.15 [173 kB] Get:57 http://ftpmaster.internal/ubuntu groovy/main amd64 libroken18-heimdal amd64 7.7.0+dfsg-1ubuntu1 [41.8 kB] Get:58 http://ftpmaster.internal/ubuntu groovy/main amd64 libasn1-8-heimdal amd64 7.7.0+dfsg-1ubuntu1 [181 kB] Get:59 http://ftpmaster.internal/ubuntu groovy/main amd64 libbrotli1 amd64 1.0.7-6build1 [270 kB] Get:60 http://ftpmaster.internal/ubuntu groovy/main amd64 libheimbase1-heimdal amd64 7.7.0+dfsg-1ubuntu1 [29.7 kB] Get:61 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http://ftpmaster.internal/ubuntu groovy/main amd64 libldap-2.4-2 amd64 2.4.49+dfsg-2ubuntu1 [156 kB] Get:71 http://ftpmaster.internal/ubuntu groovy/main amd64 libnghttp2-14 amd64 1.40.0-1build1 [78.7 kB] Get:72 http://ftpmaster.internal/ubuntu groovy/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2build1 [54.9 kB] Get:73 http://ftpmaster.internal/ubuntu groovy/main amd64 libssh-4 amd64 0.9.3-2ubuntu2 [170 kB] Get:74 http://ftpmaster.internal/ubuntu groovy/main amd64 libcurl3-gnutls amd64 7.68.0-1ubuntu2 [231 kB] Get:75 http://ftpmaster.internal/ubuntu groovy/universe amd64 libdeflate0 amd64 1.5-3 [55.6 kB] Get:76 http://ftpmaster.internal/ubuntu groovy/universe amd64 libhts3 amd64 1.10.2-3 [349 kB] Get:77 http://ftpmaster.internal/ubuntu groovy/universe amd64 python3-nose all 1.3.7-5 [116 kB] Get:78 http://ftpmaster.internal/ubuntu groovy/main amd64 python3-setuptools all 45.2.0-1 [330 kB] Get:79 http://ftpmaster.internal/ubuntu groovy/universe amd64 samtools amd64 1.10-3 [496 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 26.6 MB in 1s (26.7 MB/s) Selecting previously unselected package liblocale-gettext-perl. 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Setting up libkrb5support0:amd64 (1.17-6ubuntu4) ... Setting up libsasl2-modules-db:amd64 (2.1.27+dfsg-2) ... Setting up autotools-dev (20180224.1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2build1) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up autopoint (0.19.8.1-10build1) ... Setting up libk5crypto3:amd64 (1.17-6ubuntu4) ... Setting up libsasl2-2:amd64 (2.1.27+dfsg-2) ... Setting up libroken18-heimdal:amd64 (7.7.0+dfsg-1ubuntu1) ... Setting up libuchardet0:amd64 (0.0.6-3build1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libkrb5-3:amd64 (1.17-6ubuntu4) ... Setting up libmpdec2:amd64 (2.4.2-3) ... Setting up libpython3.8-stdlib:amd64 (3.8.2-1ubuntu1) ... Setting up python3.8 (3.8.2-1ubuntu1) ... Setting up libbsd0:amd64 (0.10.0-1) ... Setting up libelf1:amd64 (0.176-1.1build1) ... Setting up libxml2:amd64 (2.9.10+dfsg-5) ... Setting up liblocale-gettext-perl (1.07-4) ... Setting up libpython3-stdlib:amd64 (3.8.2-0ubuntu2) ... Setting up libheimbase1-heimdal:amd64 (7.7.0+dfsg-1ubuntu1) ... Setting up libfile-stripnondeterminism-perl (1.7.0-1) ... Setting up libtool (2.4.6-14) ... Setting up libasn1-8-heimdal:amd64 (7.7.0+dfsg-1ubuntu1) ... Setting up m4 (1.4.18-4) ... Setting up python3 (3.8.2-0ubuntu2) ... Setting up libhcrypto4-heimdal:amd64 (7.7.0+dfsg-1ubuntu1) ... Setting up help2man (1.47.15) ... Setting up libwind0-heimdal:amd64 (7.7.0+dfsg-1ubuntu1) ... Setting up bsdmainutils (11.1.2ubuntu3) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:amd64 (1.17-6ubuntu4) ... Setting up libcroco3:amd64 (0.6.13-1) ... Setting up libssh-4:amd64 (0.9.3-2ubuntu2) ... Setting up autoconf (2.69-11.1) ... Setting up dh-strip-nondeterminism (1.7.0-1) ... Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-4build1) ... Setting up python3-lib2to3 (3.8.2-1ubuntu1) ... Setting up python3-pkg-resources (45.2.0-1) ... Setting up automake (1:1.16.1-4ubuntu6) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up python3-distutils (3.8.2-1ubuntu1) ... Setting up dh-python (4.20200315) ... Setting up gettext (0.19.8.1-10build1) ... Setting up python3-setuptools (45.2.0-1) ... Setting up libhx509-5-heimdal:amd64 (7.7.0+dfsg-1ubuntu1) ... Setting up man-db (2.9.1-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up python3-nose (1.3.7-5) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libkrb5-26-heimdal:amd64 (7.7.0+dfsg-1ubuntu1) ... Setting up po-debconf (1.0.21) ... Setting up libheimntlm0-heimdal:amd64 (7.7.0+dfsg-1ubuntu1) ... Setting up libgssapi3-heimdal:amd64 (7.7.0+dfsg-1ubuntu1) ... Setting up libldap-2.4-2:amd64 (2.4.49+dfsg-2ubuntu1) ... Setting up libcurl3-gnutls:amd64 (7.68.0-1ubuntu2) ... Setting up libhts3:amd64 (1.10.2-3) ... Setting up samtools (1.10-3) ... Setting up dh-autoreconf (19) ... Setting up debhelper (13ubuntu1) ... Setting up sbuild-build-depends-fastaq-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.31-0ubuntu9) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-177-generic amd64 (x86_64) Toolchain package versions: binutils_2.34-6ubuntu1 dpkg-dev_1.19.7ubuntu3 g++-9_9.3.0-11ubuntu2 gcc-9_9.3.0-11ubuntu2 libc6-dev_2.31-0ubuntu9 libstdc++-9-dev_9.3.0-11ubuntu2 libstdc++6_10-20200425-1ubuntu2 linux-libc-dev_5.4.0-26.30 Package versions: adduser_3.118ubuntu2 advancecomp_2.1-2.1build1 apt_2.0.2 autoconf_2.69-11.1 automake_1:1.16.1-4ubuntu6 autopoint_0.19.8.1-10build1 autotools-dev_20180224.1 base-files_11ubuntu6 base-passwd_3.5.47 bash_5.0-6ubuntu1 binutils_2.34-6ubuntu1 binutils-common_2.34-6ubuntu1 binutils-x86-64-linux-gnu_2.34-6ubuntu1 bsdmainutils_11.1.2ubuntu3 bsdutils_1:2.34-0.1ubuntu9 build-essential_12.8ubuntu1 bzip2_1.0.8-2 ca-certificates_20190110ubuntu1 coreutils_8.30-3ubuntu2 cpp_4:9.3.0-1ubuntu2 cpp-9_9.3.0-11ubuntu2 dash_0.5.10.2-6 debconf_1.5.73 debhelper_13ubuntu1 debianutils_4.9.1 dh-autoreconf_19 dh-python_4.20200315 dh-strip-nondeterminism_1.7.0-1 diffutils_1:3.7-3 dpkg_1.19.7ubuntu3 dpkg-dev_1.19.7ubuntu3 dwz_0.13-5 e2fsprogs_1.45.5-2ubuntu1 fakeroot_1.24-1 fdisk_2.34-0.1ubuntu9 file_1:5.38-4 findutils_4.7.0-1ubuntu1 g++_4:9.3.0-1ubuntu2 g++-9_9.3.0-11ubuntu2 gcc_4:9.3.0-1ubuntu2 gcc-10-base_10-20200425-1ubuntu2 gcc-9_9.3.0-11ubuntu2 gcc-9-base_9.3.0-11ubuntu2 gettext_0.19.8.1-10build1 gettext-base_0.19.8.1-10build1 gpg_2.2.19-3ubuntu2 gpg-agent_2.2.19-3ubuntu2 gpgconf_2.2.19-3ubuntu2 gpgv_2.2.19-3ubuntu2 grep_3.4-1 groff-base_1.22.4-4build1 gzip_1.10-0ubuntu4 help2man_1.47.15 hostname_3.23 init_1.57 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-6 libapparmor1_2.13.3-7ubuntu5 libapt-pkg6.0_2.0.2 libarchive-zip-perl_1.68-1 libargon2-1_0~20171227-0.2 libasan5_9.3.0-11ubuntu2 libasn1-8-heimdal_7.7.0+dfsg-1ubuntu1 libassuan0_2.5.3-7ubuntu2 libatomic1_10-20200425-1ubuntu2 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-2ubuntu6 libaudit1_1:2.8.5-2ubuntu6 libbinutils_2.34-6ubuntu1 libblkid1_2.34-0.1ubuntu9 libbrotli1_1.0.7-6build1 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libc-bin_2.31-0ubuntu9 libc-dev-bin_2.31-0ubuntu9 libc6_2.31-0ubuntu9 libc6-dev_2.31-0ubuntu9 libcap-ng0_0.7.9-2.1build1 libcap2_1:2.33-1 libcc1-0_10-20200425-1ubuntu2 libcom-err2_1.45.5-2ubuntu1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.10-10ubuntu4 libcrypt1_1:4.4.10-10ubuntu4 libcryptsetup12_2:2.2.2-3ubuntu2 libctf-nobfd0_2.34-6ubuntu1 libctf0_2.34-6ubuntu1 libcurl3-gnutls_7.68.0-1ubuntu2 libdb5.3_5.3.28+dfsg1-0.6ubuntu2 libdebconfclient0_0.251ubuntu1 libdebhelper-perl_13ubuntu1 libdeflate0_1.5-3 libdevmapper1.02.1_2:1.02.167-1ubuntu1 libdpkg-perl_1.19.7ubuntu3 libelf1_0.176-1.1build1 libexpat1_2.2.9-1build1 libext2fs2_1.45.5-2ubuntu1 libfakeroot_1.24-1 libfdisk1_2.34-0.1ubuntu9 libffi7_3.3-4 libfile-stripnondeterminism-perl_1.7.0-1 libgcc-9-dev_9.3.0-11ubuntu2 libgcc-s1_10-20200425-1ubuntu2 libgcrypt20_1.8.5-5ubuntu1 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libglib2.0-0_2.64.2-1~fakesync1 libgmp10_2:6.2.0+dfsg-4 libgnutls30_3.6.13-2ubuntu1 libgomp1_10-20200425-1ubuntu2 libgpg-error0_1.37-1 libgssapi-krb5-2_1.17-6ubuntu4 libgssapi3-heimdal_7.7.0+dfsg-1ubuntu1 libhcrypto4-heimdal_7.7.0+dfsg-1ubuntu1 libheimbase1-heimdal_7.7.0+dfsg-1ubuntu1 libheimntlm0-heimdal_7.7.0+dfsg-1ubuntu1 libhogweed5_3.5.1+really3.5.1-2 libhts3_1.10.2-3 libhx509-5-heimdal_7.7.0+dfsg-1ubuntu1 libicu66_66.1-2ubuntu2 libidn2-0_2.3.0-1 libip4tc2_1.8.4-3ubuntu2 libisl22_0.22.1-1 libitm1_10-20200425-1ubuntu2 libjson-c4_0.13.1+dfsg-7 libk5crypto3_1.17-6ubuntu4 libkeyutils1_1.6.1-2ubuntu1 libkmod2_27-1ubuntu2 libkrb5-26-heimdal_7.7.0+dfsg-1ubuntu1 libkrb5-3_1.17-6ubuntu4 libkrb5support0_1.17-6ubuntu4 libldap-2.4-2_2.4.49+dfsg-2ubuntu1 libldap-common_2.4.49+dfsg-2ubuntu1 liblocale-gettext-perl_1.07-4 liblockfile-bin_1.16-1.1 liblockfile1_1.16-1.1 liblsan0_10-20200425-1ubuntu2 liblz4-1_1.9.2-2 liblzma5_5.2.4-1 libmagic-mgc_1:5.38-4 libmagic1_1:5.38-4 libmount1_2.34-0.1ubuntu9 libmpc3_1.1.0-1 libmpdec2_2.4.2-3 libmpfr6_4.0.2-1 libncurses6_6.2-1 libncursesw6_6.2-1 libnettle7_3.5.1+really3.5.1-2 libnghttp2-14_1.40.0-1build1 libnpth0_1.6-1 libp11-kit0_0.23.20-1build1 libpam-modules_1.3.1-5ubuntu4 libpam-modules-bin_1.3.1-5ubuntu4 libpam-runtime_1.3.1-5ubuntu4 libpam0g_1.3.1-5ubuntu4 libpcre2-8-0_10.34-7 libpcre3_2:8.39-12build1 libperl5.30_5.30.0-9build1 libpipeline1_1.5.2-2build1 libpng16-16_1.6.37-2 libprocps8_2:3.3.16-1ubuntu2 libpsl5_0.21.0-1ubuntu1 libpython3-stdlib_3.8.2-0ubuntu2 libpython3.8-minimal_3.8.2-1ubuntu1 libpython3.8-stdlib_3.8.2-1ubuntu1 libquadmath0_10-20200425-1ubuntu2 libreadline8_8.0-4 libroken18-heimdal_7.7.0+dfsg-1ubuntu1 librtmp1_2.4+20151223.gitfa8646d.1-2build1 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.3-1ubuntu1 libselinux1_3.0-1build2 libsemanage-common_3.0-1build2 libsemanage1_3.0-1build2 libsepol1_3.0-1 libsigsegv2_2.12-2 libsmartcols1_2.34-0.1ubuntu9 libsqlite3-0_3.31.1-4 libss2_1.45.5-2ubuntu1 libssh-4_0.9.3-2ubuntu2 libssl1.1_1.1.1f-1ubuntu2 libstdc++-9-dev_9.3.0-11ubuntu2 libstdc++6_10-20200425-1ubuntu2 libsub-override-perl_0.09-2 libsystemd0_245.4-4ubuntu3 libtasn1-6_4.16.0-2 libtinfo6_6.2-1 libtool_2.4.6-14 libtsan0_10-20200425-1ubuntu2 libubsan1_10-20200425-1ubuntu2 libuchardet0_0.0.6-3build1 libudev1_245.4-4ubuntu3 libunistring2_0.9.10-2 libuuid1_2.34-0.1ubuntu9 libwind0-heimdal_7.7.0+dfsg-1ubuntu1 libxml2_2.9.10+dfsg-5 libzstd1_1.4.4+dfsg-3 linux-libc-dev_5.4.0-26.30 lockfile-progs_0.1.18 login_1:4.8.1-1ubuntu5 logsave_1.45.5-2ubuntu1 lsb-base_11.1.0ubuntu2 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.1-1 mawk_1.3.4.20200120-2 mime-support_3.64ubuntu1 mount_2.34-0.1ubuntu9 ncurses-base_6.2-1 ncurses-bin_6.2-1 openssl_1.1.1f-1ubuntu2 optipng_0.7.7-1 passwd_1:4.8.1-1ubuntu5 patch_2.7.6-6 perl_5.30.0-9build1 perl-base_5.30.0-9build1 perl-modules-5.30_5.30.0-9build1 pinentry-curses_1.1.0-3build1 pkgbinarymangler_144 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.16-1ubuntu2 python3_3.8.2-0ubuntu2 python3-distutils_3.8.2-1ubuntu1 python3-lib2to3_3.8.2-1ubuntu1 python3-minimal_3.8.2-0ubuntu2 python3-nose_1.3.7-5 python3-pkg-resources_45.2.0-1 python3-setuptools_45.2.0-1 python3.8_3.8.2-1ubuntu1 python3.8-minimal_3.8.2-1ubuntu1 readline-common_8.0-4 samtools_1.10-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-fastaq-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 systemd_245.4-4ubuntu3 systemd-sysv_245.4-4ubuntu3 systemd-timesyncd_245.4-4ubuntu3 sysvinit-utils_2.96-2.1ubuntu1 tar_1.30+dfsg-7 tzdata_2019c-3ubuntu1 ubuntu-keyring_2020.02.11.2 util-linux_2.34-0.1ubuntu9 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-2ubuntu1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Fri Apr 17 10:12:18 2020 UTC gpgv: using RSA key 5B34BA5AAB5507E903426E85E8D37AE2F09F4872 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./fastaq_3.17.0-3.dsc dpkg-source: info: extracting fastaq in fastaq-3.17.0 dpkg-source: info: unpacking fastaq_3.17.0.orig.tar.gz dpkg-source: info: unpacking fastaq_3.17.0-3.debian.tar.xz Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-19214428 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-19214428 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-19214428 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package fastaq dpkg-buildpackage: info: source version 3.17.0-3 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean --with python3 --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' rm -rf build .pybuild doc pyfastaq.egg-info find . -name __pycache__ | xargs rm -rf rm -rf /<>/debian/man make[1]: Leaving directory '/<>' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/fastaq.substvars debian/files rm -fr -- debian/fastaq/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules build dh build --with python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild pybuild --configure --test-nose -i python{version} -p 3.8 I: pybuild base:217: python3.8 setup.py config running config debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_python3 D: dh_python3 dh_python3:161: version: 4.20200315 D: dh_python3 dh_python3:162: argv: ['/usr/bin/dh_python3'] D: dh_python3 dh_python3:163: options: {'guess_deps': True, 'skip_private': False, 'verbose': False, 'arch': None, 'package': None, 'no_package': None, 'compile_all': False, 'vrange': None, 'regexpr': None, 'accept_upstream_versions': False, 'depends': None, 'depends_section': None, 'recommends': None, 'recommends_section': None, 'suggests': None, 'suggests_section': None, 'requires': None, 'shebang': None, 'ignore_shebangs': False, 'clean_dbg_pkg': True, 'no_ext_rename': False, 'no_shebang_rewrite': False, 'O': None} D: dh_python3 dh_python3:164: args: [] D: dh_python3 dh_python3:165: supported Python versions: 3.8 (default=3.8) D: dh_python3 debhelper:152: source=fastaq, binary packages=['fastaq'] D: dh_python3 dh_python3:183: processing package fastaq... D: dh_python3 fs:260: package fastaq details = {'requires.txt': set(), 'egg-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': set(), 'private_dirs': {}, 'compile': False, 'ext_vers': set(), 'ext_no_version': set()} D: dh_python3 depends:117: generating dependencies for package fastaq D: dh_python3 depends:275: D=set(); R=[]; S=[]; E=[], B=[]; RT=[] dh_auto_build pybuild --build --test-nose -i python{version} -p 3.8 I: pybuild base:217: /usr/bin/python3 setup.py build running build running build_py creating /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq copying pyfastaq/intervals.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq copying pyfastaq/sequences.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq copying pyfastaq/__init__.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq copying pyfastaq/genetic_codes.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq copying pyfastaq/utils.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq copying pyfastaq/tasks.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq copying pyfastaq/caf.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq creating /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/to_fasta.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/version.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/reverse_complement.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/make_random_contigs.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/scaffolds_to_contigs.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/to_unique_by_id.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/to_mira_xml.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/merge.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/sort_by_size.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/trim_contigs.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/trim_ends.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/deinterleave.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/to_perfect_reads.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/enumerate_names.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/search_for_seq.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/__init__.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/filter.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/interleave.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/caf_to_fastq.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/to_fake_qual.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/translate.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/capillary_to_pairs.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/replace_bases.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/count_sequences.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/to_random_subset.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/to_orfs_gff.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/get_ids.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/expand_nucleotides.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/to_tiling_bam.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/chunker.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/acgtn_only.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/strip_illumina_suffix.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/to_boulderio.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/sequence_trim.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/trim_Ns_at_end.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/fasta_to_fastq.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/get_seq_flanking_gaps.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/sort_by_name.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/add_indels.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners copying pyfastaq/runners/split_by_base_count.py -> /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners running build_scripts creating build creating build/scripts-3.8 copying and adjusting scripts/fastaq -> build/scripts-3.8 changing mode of build/scripts-3.8/fastaq from 644 to 755 mkdir /<>/doc cd /<>/doc make[1]: Leaving directory '/<>' dh_auto_test -O--buildsystem=pybuild pybuild --test --test-nose -i python{version} -p 3.8 I: pybuild base:217: cd /<>/.pybuild/cpython3_3.8_fastaq/build; python3.8 -m nose -v ---------------------------------------------------------------------- Ran 0 tests in 0.050s OK create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --with python3 --buildsystem=pybuild dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild rm -f -- debian/fastaq.substvars rm -fr -- debian/.debhelper/generated/fastaq/ debian/fastaq/ debian/tmp/ dh_auto_install -O--buildsystem=pybuild install -d /<>/debian/fastaq pybuild --install --test-nose -i python{version} -p 3.8 --dest-dir /<>/debian/fastaq I: pybuild base:217: /usr/bin/python3 setup.py install --root /<>/debian/fastaq running install running build running build_py running build_scripts running install_lib creating /<>/debian/fastaq/usr creating /<>/debian/fastaq/usr/lib creating /<>/debian/fastaq/usr/lib/python3.8 creating /<>/debian/fastaq/usr/lib/python3.8/dist-packages creating /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/intervals.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/sequences.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/__init__.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/genetic_codes.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/utils.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq creating /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/__pycache__ copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/__pycache__/utils.cpython-38.pyc -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/__pycache__ copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/__pycache__/caf.cpython-38.pyc -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/__pycache__ copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/__pycache__/tasks.cpython-38.pyc -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/__pycache__ copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/__pycache__/genetic_codes.cpython-38.pyc -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/__pycache__ copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/__pycache__/sequences.cpython-38.pyc -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/__pycache__ copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/__pycache__/intervals.cpython-38.pyc -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/__pycache__ copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/__pycache__/__init__.cpython-38.pyc -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/__pycache__ copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/tasks.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq creating /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/to_fasta.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/version.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/reverse_complement.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/make_random_contigs.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/scaffolds_to_contigs.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/to_unique_by_id.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/to_mira_xml.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/merge.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/sort_by_size.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/trim_contigs.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/trim_ends.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/deinterleave.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/to_perfect_reads.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/enumerate_names.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/search_for_seq.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/__init__.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/filter.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/interleave.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/caf_to_fastq.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/to_fake_qual.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/translate.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/capillary_to_pairs.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/replace_bases.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/count_sequences.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/to_random_subset.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/to_orfs_gff.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/get_ids.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/expand_nucleotides.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/to_tiling_bam.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/chunker.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/acgtn_only.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners creating /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/__pycache__ copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/__pycache__/__init__.cpython-38.pyc -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/__pycache__ copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/strip_illumina_suffix.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/to_boulderio.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/sequence_trim.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/trim_Ns_at_end.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/fasta_to_fastq.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/get_seq_flanking_gaps.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/sort_by_name.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/add_indels.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/runners/split_by_base_count.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners copying /<>/.pybuild/cpython3_3.8_fastaq/build/pyfastaq/caf.py -> /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/intervals.py to intervals.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/sequences.py to sequences.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/__init__.py to __init__.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/genetic_codes.py to genetic_codes.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/utils.py to utils.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/tasks.py to tasks.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/to_fasta.py to to_fasta.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/version.py to version.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/reverse_complement.py to reverse_complement.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/make_random_contigs.py to make_random_contigs.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/scaffolds_to_contigs.py to scaffolds_to_contigs.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/to_unique_by_id.py to to_unique_by_id.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/to_mira_xml.py to to_mira_xml.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/merge.py to merge.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/sort_by_size.py to sort_by_size.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/trim_contigs.py to trim_contigs.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/trim_ends.py to trim_ends.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/deinterleave.py to deinterleave.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/to_perfect_reads.py to to_perfect_reads.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/enumerate_names.py to enumerate_names.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/search_for_seq.py to search_for_seq.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/__init__.py to __init__.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/filter.py to filter.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/interleave.py to interleave.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/caf_to_fastq.py to caf_to_fastq.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/to_fake_qual.py to to_fake_qual.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/translate.py to translate.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/capillary_to_pairs.py to capillary_to_pairs.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/replace_bases.py to replace_bases.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/count_sequences.py to count_sequences.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/to_random_subset.py to to_random_subset.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/to_orfs_gff.py to to_orfs_gff.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/get_ids.py to get_ids.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/expand_nucleotides.py to expand_nucleotides.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/to_tiling_bam.py to to_tiling_bam.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/chunker.py to chunker.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/acgtn_only.py to acgtn_only.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/strip_illumina_suffix.py to strip_illumina_suffix.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/to_boulderio.py to to_boulderio.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/sequence_trim.py to sequence_trim.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/trim_Ns_at_end.py to trim_Ns_at_end.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/fasta_to_fastq.py to fasta_to_fastq.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/get_seq_flanking_gaps.py to get_seq_flanking_gaps.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/sort_by_name.py to sort_by_name.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/add_indels.py to add_indels.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/runners/split_by_base_count.py to split_by_base_count.cpython-38.pyc byte-compiling /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq/caf.py to caf.cpython-38.pyc running install_egg_info running egg_info creating pyfastaq.egg-info writing pyfastaq.egg-info/PKG-INFO writing dependency_links to pyfastaq.egg-info/dependency_links.txt writing top-level names to pyfastaq.egg-info/top_level.txt writing manifest file 'pyfastaq.egg-info/SOURCES.txt' reading manifest file 'pyfastaq.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'pyfastaq.egg-info/SOURCES.txt' Copying pyfastaq.egg-info to /<>/debian/fastaq/usr/lib/python3.8/dist-packages/pyfastaq-3.17.0.egg-info Skipping SOURCES.txt running install_scripts creating /<>/debian/fastaq/usr/bin copying build/scripts-3.8/fastaq -> /<>/debian/fastaq/usr/bin changing mode of /<>/debian/fastaq/usr/bin/fastaq to 755 dh_installdocs -O--buildsystem=pybuild install -d debian/fastaq/usr/share/doc/fastaq install -d debian/.debhelper/generated/fastaq install -p -m0644 debian/copyright debian/fastaq/usr/share/doc/fastaq/copyright dh_installchangelogs -O--buildsystem=pybuild install -p -m0644 debian/changelog debian/fastaq/usr/share/doc/fastaq/changelog.Debian rm -f debian/fastaq.debhelper.log debian/rules override_dh_installman make[1]: Entering directory '/<>' mkdir -p /<>/debian/man PYTHONPATH=. help2man -N -o debian/man/fastaq.1 \ -n 'FASTA and FASTQ file manipulation tools' \ --no-discard-stderr \ --version-string=`PYTHONPATH=. scripts/fastaq version` scripts/fastaq sed -i 's/.SH DESCRIPTION/.SH DESCRIPTION\\n.nf/' debian/man/fastaq.1 scripts/fastaq 2>&1 | tail -n +13 | debian/make_man dh_installman -- install -d debian/fastaq/usr/share/man/man1/ install -p -m0644 ./debian/man/fastaq-acgtn_only.1 debian/fastaq/usr/share/man/man1/fastaq-acgtn_only.1 install -p -m0644 ./debian/man/fastaq-add_indels.1 debian/fastaq/usr/share/man/man1/fastaq-add_indels.1 install -p -m0644 ./debian/man/fastaq-caf_to_fastq.1 debian/fastaq/usr/share/man/man1/fastaq-caf_to_fastq.1 install -p -m0644 ./debian/man/fastaq-capillary_to_pairs.1 debian/fastaq/usr/share/man/man1/fastaq-capillary_to_pairs.1 install -p -m0644 ./debian/man/fastaq-chunker.1 debian/fastaq/usr/share/man/man1/fastaq-chunker.1 install -p -m0644 ./debian/man/fastaq-count_sequences.1 debian/fastaq/usr/share/man/man1/fastaq-count_sequences.1 install -p -m0644 ./debian/man/fastaq-deinterleave.1 debian/fastaq/usr/share/man/man1/fastaq-deinterleave.1 install -p -m0644 ./debian/man/fastaq-enumerate_names.1 debian/fastaq/usr/share/man/man1/fastaq-enumerate_names.1 install -p -m0644 ./debian/man/fastaq-expand_nucleotides.1 debian/fastaq/usr/share/man/man1/fastaq-expand_nucleotides.1 install -p -m0644 ./debian/man/fastaq-fasta_to_fastq.1 debian/fastaq/usr/share/man/man1/fastaq-fasta_to_fastq.1 install -p -m0644 ./debian/man/fastaq-filter.1 debian/fastaq/usr/share/man/man1/fastaq-filter.1 install -p -m0644 ./debian/man/fastaq-get_ids.1 debian/fastaq/usr/share/man/man1/fastaq-get_ids.1 install -p -m0644 ./debian/man/fastaq-get_seq_flanking_gaps.1 debian/fastaq/usr/share/man/man1/fastaq-get_seq_flanking_gaps.1 install -p -m0644 ./debian/man/fastaq-interleave.1 debian/fastaq/usr/share/man/man1/fastaq-interleave.1 install -p -m0644 ./debian/man/fastaq-make_random_contigs.1 debian/fastaq/usr/share/man/man1/fastaq-make_random_contigs.1 install -p -m0644 ./debian/man/fastaq-merge.1 debian/fastaq/usr/share/man/man1/fastaq-merge.1 install -p -m0644 ./debian/man/fastaq-replace_bases.1 debian/fastaq/usr/share/man/man1/fastaq-replace_bases.1 install -p -m0644 ./debian/man/fastaq-reverse_complement.1 debian/fastaq/usr/share/man/man1/fastaq-reverse_complement.1 install -p -m0644 ./debian/man/fastaq-scaffolds_to_contigs.1 debian/fastaq/usr/share/man/man1/fastaq-scaffolds_to_contigs.1 install -p -m0644 ./debian/man/fastaq-search_for_seq.1 debian/fastaq/usr/share/man/man1/fastaq-search_for_seq.1 install -p -m0644 ./debian/man/fastaq-sequence_trim.1 debian/fastaq/usr/share/man/man1/fastaq-sequence_trim.1 install -p -m0644 ./debian/man/fastaq-sort_by_name.1 debian/fastaq/usr/share/man/man1/fastaq-sort_by_name.1 install -p -m0644 ./debian/man/fastaq-sort_by_size.1 debian/fastaq/usr/share/man/man1/fastaq-sort_by_size.1 install -p -m0644 ./debian/man/fastaq-split_by_base_count.1 debian/fastaq/usr/share/man/man1/fastaq-split_by_base_count.1 install -p -m0644 ./debian/man/fastaq-strip_illumina_suffix.1 debian/fastaq/usr/share/man/man1/fastaq-strip_illumina_suffix.1 install -p -m0644 ./debian/man/fastaq-to_boulderio.1 debian/fastaq/usr/share/man/man1/fastaq-to_boulderio.1 install -p -m0644 ./debian/man/fastaq-to_fake_qual.1 debian/fastaq/usr/share/man/man1/fastaq-to_fake_qual.1 install -p -m0644 ./debian/man/fastaq-to_fasta.1 debian/fastaq/usr/share/man/man1/fastaq-to_fasta.1 install -p -m0644 ./debian/man/fastaq-to_mira_xml.1 debian/fastaq/usr/share/man/man1/fastaq-to_mira_xml.1 install -p -m0644 ./debian/man/fastaq-to_orfs_gff.1 debian/fastaq/usr/share/man/man1/fastaq-to_orfs_gff.1 install -p -m0644 ./debian/man/fastaq-to_perfect_reads.1 debian/fastaq/usr/share/man/man1/fastaq-to_perfect_reads.1 install -p -m0644 ./debian/man/fastaq-to_random_subset.1 debian/fastaq/usr/share/man/man1/fastaq-to_random_subset.1 install -p -m0644 ./debian/man/fastaq-to_tiling_bam.1 debian/fastaq/usr/share/man/man1/fastaq-to_tiling_bam.1 install -p -m0644 ./debian/man/fastaq-to_unique_by_id.1 debian/fastaq/usr/share/man/man1/fastaq-to_unique_by_id.1 install -p -m0644 ./debian/man/fastaq-translate.1 debian/fastaq/usr/share/man/man1/fastaq-translate.1 install -p -m0644 ./debian/man/fastaq-trim_contigs.1 debian/fastaq/usr/share/man/man1/fastaq-trim_contigs.1 install -p -m0644 ./debian/man/fastaq-trim_ends.1 debian/fastaq/usr/share/man/man1/fastaq-trim_ends.1 install -p -m0644 ./debian/man/fastaq-trim_Ns_at_end.1 debian/fastaq/usr/share/man/man1/fastaq-trim_Ns_at_end.1 install -p -m0644 ./debian/man/fastaq-version.1 debian/fastaq/usr/share/man/man1/fastaq-version.1 install -p -m0644 ./debian/man/fastaq.1 debian/fastaq/usr/share/man/man1/fastaq.1 man-recode --to-code UTF-8 --suffix .dh-new debian/fastaq/usr/share/man/man1/fastaq-acgtn_only.1 debian/fastaq/usr/share/man/man1/fastaq-add_indels.1 debian/fastaq/usr/share/man/man1/fastaq-caf_to_fastq.1 debian/fastaq/usr/share/man/man1/fastaq-capillary_to_pairs.1 debian/fastaq/usr/share/man/man1/fastaq-chunker.1 debian/fastaq/usr/share/man/man1/fastaq-count_sequences.1 debian/fastaq/usr/share/man/man1/fastaq-deinterleave.1 debian/fastaq/usr/share/man/man1/fastaq-enumerate_names.1 debian/fastaq/usr/share/man/man1/fastaq-expand_nucleotides.1 debian/fastaq/usr/share/man/man1/fastaq-fasta_to_fastq.1 man-recode --to-code UTF-8 --suffix .dh-new debian/fastaq/usr/share/man/man1/fastaq-filter.1 debian/fastaq/usr/share/man/man1/fastaq-get_ids.1 debian/fastaq/usr/share/man/man1/fastaq-get_seq_flanking_gaps.1 debian/fastaq/usr/share/man/man1/fastaq-interleave.1 debian/fastaq/usr/share/man/man1/fastaq-make_random_contigs.1 debian/fastaq/usr/share/man/man1/fastaq-merge.1 debian/fastaq/usr/share/man/man1/fastaq-replace_bases.1 debian/fastaq/usr/share/man/man1/fastaq-reverse_complement.1 debian/fastaq/usr/share/man/man1/fastaq-scaffolds_to_contigs.1 debian/fastaq/usr/share/man/man1/fastaq-search_for_seq.1 man-recode --to-code UTF-8 --suffix .dh-new debian/fastaq/usr/share/man/man1/fastaq-sequence_trim.1 debian/fastaq/usr/share/man/man1/fastaq-sort_by_name.1 debian/fastaq/usr/share/man/man1/fastaq-sort_by_size.1 debian/fastaq/usr/share/man/man1/fastaq-split_by_base_count.1 debian/fastaq/usr/share/man/man1/fastaq-strip_illumina_suffix.1 debian/fastaq/usr/share/man/man1/fastaq-to_boulderio.1 debian/fastaq/usr/share/man/man1/fastaq-to_fake_qual.1 debian/fastaq/usr/share/man/man1/fastaq-to_fasta.1 debian/fastaq/usr/share/man/man1/fastaq-to_mira_xml.1 debian/fastaq/usr/share/man/man1/fastaq-to_orfs_gff.1 man-recode --to-code UTF-8 --suffix .dh-new debian/fastaq/usr/share/man/man1/fastaq-to_perfect_reads.1 debian/fastaq/usr/share/man/man1/fastaq-to_random_subset.1 debian/fastaq/usr/share/man/man1/fastaq-to_tiling_bam.1 debian/fastaq/usr/share/man/man1/fastaq-to_unique_by_id.1 debian/fastaq/usr/share/man/man1/fastaq-translate.1 debian/fastaq/usr/share/man/man1/fastaq-trim_Ns_at_end.1 debian/fastaq/usr/share/man/man1/fastaq-trim_contigs.1 debian/fastaq/usr/share/man/man1/fastaq-trim_ends.1 debian/fastaq/usr/share/man/man1/fastaq-version.1 debian/fastaq/usr/share/man/man1/fastaq.1 mv debian/fastaq/usr/share/man/man1/fastaq-sequence_trim.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-sequence_trim.1 mv debian/fastaq/usr/share/man/man1/fastaq-sort_by_name.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-sort_by_name.1 mv debian/fastaq/usr/share/man/man1/fastaq-sort_by_size.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-sort_by_size.1 mv debian/fastaq/usr/share/man/man1/fastaq-split_by_base_count.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-split_by_base_count.1 mv debian/fastaq/usr/share/man/man1/fastaq-strip_illumina_suffix.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-strip_illumina_suffix.1 mv debian/fastaq/usr/share/man/man1/fastaq-to_boulderio.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-to_boulderio.1 mv debian/fastaq/usr/share/man/man1/fastaq-to_fake_qual.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-to_fake_qual.1 mv debian/fastaq/usr/share/man/man1/fastaq-to_fasta.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-to_fasta.1 mv debian/fastaq/usr/share/man/man1/fastaq-to_mira_xml.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-to_mira_xml.1 mv debian/fastaq/usr/share/man/man1/fastaq-to_orfs_gff.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-to_orfs_gff.1 chmod 0644 -- debian/fastaq/usr/share/man/man1/fastaq-sequence_trim.1 debian/fastaq/usr/share/man/man1/fastaq-sort_by_name.1 debian/fastaq/usr/share/man/man1/fastaq-sort_by_size.1 debian/fastaq/usr/share/man/man1/fastaq-split_by_base_count.1 debian/fastaq/usr/share/man/man1/fastaq-strip_illumina_suffix.1 debian/fastaq/usr/share/man/man1/fastaq-to_boulderio.1 debian/fastaq/usr/share/man/man1/fastaq-to_fake_qual.1 debian/fastaq/usr/share/man/man1/fastaq-to_fasta.1 debian/fastaq/usr/share/man/man1/fastaq-to_mira_xml.1 debian/fastaq/usr/share/man/man1/fastaq-to_orfs_gff.1 mv debian/fastaq/usr/share/man/man1/fastaq-filter.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-filter.1 mv debian/fastaq/usr/share/man/man1/fastaq-get_ids.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-get_ids.1 mv debian/fastaq/usr/share/man/man1/fastaq-get_seq_flanking_gaps.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-get_seq_flanking_gaps.1 mv debian/fastaq/usr/share/man/man1/fastaq-interleave.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-interleave.1 mv debian/fastaq/usr/share/man/man1/fastaq-make_random_contigs.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-make_random_contigs.1 mv debian/fastaq/usr/share/man/man1/fastaq-merge.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-merge.1 mv debian/fastaq/usr/share/man/man1/fastaq-replace_bases.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-replace_bases.1 mv debian/fastaq/usr/share/man/man1/fastaq-reverse_complement.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-reverse_complement.1 mv debian/fastaq/usr/share/man/man1/fastaq-scaffolds_to_contigs.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-scaffolds_to_contigs.1 mv debian/fastaq/usr/share/man/man1/fastaq-search_for_seq.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-search_for_seq.1 chmod 0644 -- debian/fastaq/usr/share/man/man1/fastaq-filter.1 debian/fastaq/usr/share/man/man1/fastaq-get_ids.1 debian/fastaq/usr/share/man/man1/fastaq-get_seq_flanking_gaps.1 debian/fastaq/usr/share/man/man1/fastaq-interleave.1 debian/fastaq/usr/share/man/man1/fastaq-make_random_contigs.1 debian/fastaq/usr/share/man/man1/fastaq-merge.1 debian/fastaq/usr/share/man/man1/fastaq-replace_bases.1 debian/fastaq/usr/share/man/man1/fastaq-reverse_complement.1 debian/fastaq/usr/share/man/man1/fastaq-scaffolds_to_contigs.1 debian/fastaq/usr/share/man/man1/fastaq-search_for_seq.1 mv debian/fastaq/usr/share/man/man1/fastaq-acgtn_only.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-acgtn_only.1 mv debian/fastaq/usr/share/man/man1/fastaq-add_indels.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-add_indels.1 mv debian/fastaq/usr/share/man/man1/fastaq-caf_to_fastq.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-caf_to_fastq.1 mv debian/fastaq/usr/share/man/man1/fastaq-capillary_to_pairs.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-capillary_to_pairs.1 mv debian/fastaq/usr/share/man/man1/fastaq-chunker.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-chunker.1 mv debian/fastaq/usr/share/man/man1/fastaq-count_sequences.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-count_sequences.1 mv debian/fastaq/usr/share/man/man1/fastaq-deinterleave.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-deinterleave.1 mv debian/fastaq/usr/share/man/man1/fastaq-enumerate_names.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-enumerate_names.1 mv debian/fastaq/usr/share/man/man1/fastaq-expand_nucleotides.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-expand_nucleotides.1 mv debian/fastaq/usr/share/man/man1/fastaq-fasta_to_fastq.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-fasta_to_fastq.1 chmod 0644 -- debian/fastaq/usr/share/man/man1/fastaq-acgtn_only.1 debian/fastaq/usr/share/man/man1/fastaq-add_indels.1 debian/fastaq/usr/share/man/man1/fastaq-caf_to_fastq.1 debian/fastaq/usr/share/man/man1/fastaq-capillary_to_pairs.1 debian/fastaq/usr/share/man/man1/fastaq-chunker.1 debian/fastaq/usr/share/man/man1/fastaq-count_sequences.1 debian/fastaq/usr/share/man/man1/fastaq-deinterleave.1 debian/fastaq/usr/share/man/man1/fastaq-enumerate_names.1 debian/fastaq/usr/share/man/man1/fastaq-expand_nucleotides.1 debian/fastaq/usr/share/man/man1/fastaq-fasta_to_fastq.1 mv debian/fastaq/usr/share/man/man1/fastaq-to_perfect_reads.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-to_perfect_reads.1 mv debian/fastaq/usr/share/man/man1/fastaq-to_random_subset.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-to_random_subset.1 mv debian/fastaq/usr/share/man/man1/fastaq-to_tiling_bam.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-to_tiling_bam.1 mv debian/fastaq/usr/share/man/man1/fastaq-to_unique_by_id.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-to_unique_by_id.1 mv debian/fastaq/usr/share/man/man1/fastaq-translate.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-translate.1 mv debian/fastaq/usr/share/man/man1/fastaq-trim_Ns_at_end.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-trim_Ns_at_end.1 mv debian/fastaq/usr/share/man/man1/fastaq-trim_contigs.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-trim_contigs.1 mv debian/fastaq/usr/share/man/man1/fastaq-trim_ends.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-trim_ends.1 mv debian/fastaq/usr/share/man/man1/fastaq-version.1.dh-new debian/fastaq/usr/share/man/man1/fastaq-version.1 mv debian/fastaq/usr/share/man/man1/fastaq.1.dh-new debian/fastaq/usr/share/man/man1/fastaq.1 chmod 0644 -- debian/fastaq/usr/share/man/man1/fastaq-to_perfect_reads.1 debian/fastaq/usr/share/man/man1/fastaq-to_random_subset.1 debian/fastaq/usr/share/man/man1/fastaq-to_tiling_bam.1 debian/fastaq/usr/share/man/man1/fastaq-to_unique_by_id.1 debian/fastaq/usr/share/man/man1/fastaq-translate.1 debian/fastaq/usr/share/man/man1/fastaq-trim_Ns_at_end.1 debian/fastaq/usr/share/man/man1/fastaq-trim_contigs.1 debian/fastaq/usr/share/man/man1/fastaq-trim_ends.1 debian/fastaq/usr/share/man/man1/fastaq-version.1 debian/fastaq/usr/share/man/man1/fastaq.1 make[1]: Leaving directory '/<>' dh_python3 -O--buildsystem=pybuild D: dh_python3 dh_python3:161: version: 4.20200315 D: dh_python3 dh_python3:162: argv: ['/usr/bin/dh_python3', '-O--buildsystem=pybuild'] D: dh_python3 dh_python3:163: options: {'guess_deps': True, 'skip_private': False, 'verbose': False, 'arch': None, 'package': None, 'no_package': None, 'compile_all': False, 'vrange': None, 'regexpr': None, 'accept_upstream_versions': False, 'depends': None, 'depends_section': None, 'recommends': None, 'recommends_section': None, 'suggests': None, 'suggests_section': None, 'requires': None, 'shebang': None, 'ignore_shebangs': False, 'clean_dbg_pkg': True, 'no_ext_rename': False, 'no_shebang_rewrite': False, 'O': '--buildsystem=pybuild'} D: dh_python3 dh_python3:164: args: [] D: dh_python3 dh_python3:165: supported Python versions: 3.8 (default=3.8) D: dh_python3 debhelper:152: source=fastaq, binary packages=['fastaq'] D: dh_python3 dh_python3:183: processing package fastaq... D: dh_python3 fs:49: moving files from debian/fastaq/usr/lib/python3.8/dist-packages to debian/fastaq/usr/lib/python3/dist-packages/ D: dh_python3 fs:260: package fastaq details = {'requires.txt': set(), 'egg-info': set(), 'nsp.txt': set(), 'shebangs': {/usr/bin/python3}, 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': set(), 'ext_no_version': set()} D: dh_python3 depends:117: generating dependencies for package fastaq D: dh_python3 depends:275: D={'python3:any'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_installinit -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild cd debian/fastaq chmod a-x usr/share/doc/fastaq/changelog.Debian usr/share/man/man1/fastaq-acgtn_only.1 usr/share/man/man1/fastaq-add_indels.1 usr/share/man/man1/fastaq-caf_to_fastq.1 usr/share/man/man1/fastaq-capillary_to_pairs.1 usr/share/man/man1/fastaq-chunker.1 usr/share/man/man1/fastaq-count_sequences.1 usr/share/man/man1/fastaq-deinterleave.1 usr/share/man/man1/fastaq-enumerate_names.1 usr/share/man/man1/fastaq-expand_nucleotides.1 usr/share/man/man1/fastaq-fasta_to_fastq.1 usr/share/man/man1/fastaq-filter.1 usr/share/man/man1/fastaq-get_ids.1 usr/share/man/man1/fastaq-get_seq_flanking_gaps.1 usr/share/man/man1/fastaq-interleave.1 usr/share/man/man1/fastaq-make_random_contigs.1 usr/share/man/man1/fastaq-merge.1 usr/share/man/man1/fastaq-replace_bases.1 usr/share/man/man1/fastaq-reverse_complement.1 usr/share/man/man1/fastaq-scaffolds_to_contigs.1 usr/share/man/man1/fastaq-search_for_seq.1 usr/share/man/man1/fastaq-sequence_trim.1 usr/share/man/man1/fastaq-sort_by_name.1 usr/share/man/man1/fastaq-sort_by_size.1 usr/share/man/man1/fastaq-split_by_base_count.1 usr/share/man/man1/fastaq-strip_illumina_suffix.1 usr/share/man/man1/fastaq-to_boulderio.1 usr/share/man/man1/fastaq-to_fake_qual.1 usr/share/man/man1/fastaq-to_fasta.1 usr/share/man/man1/fastaq-to_mira_xml.1 usr/share/man/man1/fastaq-to_orfs_gff.1 usr/share/man/man1/fastaq-to_perfect_reads.1 usr/share/man/man1/fastaq-to_random_subset.1 usr/share/man/man1/fastaq-to_tiling_bam.1 usr/share/man/man1/fastaq-to_unique_by_id.1 usr/share/man/man1/fastaq-translate.1 usr/share/man/man1/fastaq-trim_Ns_at_end.1 usr/share/man/man1/fastaq-trim_contigs.1 usr/share/man/man1/fastaq-trim_ends.1 usr/share/man/man1/fastaq-version.1 usr/share/man/man1/fastaq.1 gzip -9nf usr/share/doc/fastaq/changelog.Debian usr/share/man/man1/fastaq-acgtn_only.1 usr/share/man/man1/fastaq-add_indels.1 usr/share/man/man1/fastaq-caf_to_fastq.1 usr/share/man/man1/fastaq-capillary_to_pairs.1 usr/share/man/man1/fastaq-chunker.1 usr/share/man/man1/fastaq-count_sequences.1 usr/share/man/man1/fastaq-deinterleave.1 usr/share/man/man1/fastaq-enumerate_names.1 usr/share/man/man1/fastaq-expand_nucleotides.1 usr/share/man/man1/fastaq-fasta_to_fastq.1 usr/share/man/man1/fastaq-filter.1 usr/share/man/man1/fastaq-get_ids.1 usr/share/man/man1/fastaq-get_seq_flanking_gaps.1 usr/share/man/man1/fastaq-interleave.1 usr/share/man/man1/fastaq-make_random_contigs.1 usr/share/man/man1/fastaq-merge.1 usr/share/man/man1/fastaq-replace_bases.1 usr/share/man/man1/fastaq-reverse_complement.1 usr/share/man/man1/fastaq-scaffolds_to_contigs.1 usr/share/man/man1/fastaq-search_for_seq.1 usr/share/man/man1/fastaq-sequence_trim.1 usr/share/man/man1/fastaq-sort_by_name.1 usr/share/man/man1/fastaq-sort_by_size.1 usr/share/man/man1/fastaq-split_by_base_count.1 usr/share/man/man1/fastaq-strip_illumina_suffix.1 usr/share/man/man1/fastaq-to_boulderio.1 usr/share/man/man1/fastaq-to_fake_qual.1 usr/share/man/man1/fastaq-to_fasta.1 usr/share/man/man1/fastaq-to_mira_xml.1 usr/share/man/man1/fastaq-to_orfs_gff.1 usr/share/man/man1/fastaq-to_perfect_reads.1 usr/share/man/man1/fastaq-to_random_subset.1 usr/share/man/man1/fastaq-to_tiling_bam.1 usr/share/man/man1/fastaq-to_unique_by_id.1 usr/share/man/man1/fastaq-translate.1 usr/share/man/man1/fastaq-trim_Ns_at_end.1 usr/share/man/man1/fastaq-trim_contigs.1 usr/share/man/man1/fastaq-trim_ends.1 usr/share/man/man1/fastaq-version.1 usr/share/man/man1/fastaq.1 cd '/<>' dh_fixperms -O--buildsystem=pybuild find debian/fastaq -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/fastaq ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/fastaq/usr/share/doc -type f -a -true -a ! -regex 'debian/fastaq/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/fastaq/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/fastaq/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/fastaq -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/fastaq/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/fastaq/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild install -d debian/fastaq/DEBIAN printf '#!/bin/sh\nset -e\n' > debian/fastaq/DEBIAN/postinst cat debian/fastaq.postinst.debhelper >> debian/fastaq/DEBIAN/postinst chmod 0755 -- debian/fastaq/DEBIAN/postinst chown 0:0 -- debian/fastaq/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/fastaq/DEBIAN/prerm cat debian/fastaq.prerm.debhelper >> debian/fastaq/DEBIAN/prerm chmod 0755 -- debian/fastaq/DEBIAN/prerm chown 0:0 -- debian/fastaq/DEBIAN/prerm dh_gencontrol -O--buildsystem=pybuild echo misc:Depends= >> debian/fastaq.substvars echo misc:Pre-Depends= >> debian/fastaq.substvars dpkg-gencontrol -pfastaq -ldebian/changelog -Tdebian/fastaq.substvars -Pdebian/fastaq -UMulti-Arch chmod 0644 -- debian/fastaq/DEBIAN/control chown 0:0 -- debian/fastaq/DEBIAN/control dh_md5sums -O--buildsystem=pybuild cd debian/fastaq >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/fastaq/DEBIAN/md5sums chown 0:0 -- debian/fastaq/DEBIAN/md5sums dh_builddeb -O--buildsystem=pybuild dpkg-deb --build debian/fastaq .. INFO: pkgstriptranslations version 144 pkgstriptranslations: processing fastaq (in debian/fastaq); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/fastaq/DEBIAN/control, package fastaq, directory debian/fastaq pkgstripfiles: Truncating usr/share/doc/fastaq/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package fastaq ... pkgstripfiles: No PNG files. dpkg-deb: building package 'fastaq' in '../fastaq_3.17.0-3_all.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary -mLaunchpad Build Daemon >../fastaq_3.17.0-3_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20200427-1936 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ fastaq_3.17.0-3_amd64.changes: ------------------------------ Format: 1.8 Date: Fri, 17 Apr 2020 11:59:51 +0200 Source: fastaq Binary: fastaq Architecture: all Version: 3.17.0-3 Distribution: groovy-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Sascha Steinbiss Description: fastaq - FASTA and FASTQ file manipulation tools Changes: fastaq (3.17.0-3) unstable; urgency=medium . * Use debhelper-compat 12. * Remove RRID and fix EDAM syntax (Thanks Andreas Tille). * Bump Standards-Version. * Add missing DEP-12 fields. * Update d/copyright with myself in debian/* Checksums-Sha1: dd2ca6efd70c675e74d782b482c4e770a1bf2de4 47660 fastaq_3.17.0-3_all.deb a64ee6692da244e6e097e7b7e71dd829cc51be04 6889 fastaq_3.17.0-3_amd64.buildinfo Checksums-Sha256: 541d2d96211cd99320e8db126f6832ecc7bcaca34f3ec7095b8ca0caeed652c1 47660 fastaq_3.17.0-3_all.deb 26faf42db16926f5fbfc79786b91741478fab47e4669f1cf31de1f2cbae3f68a 6889 fastaq_3.17.0-3_amd64.buildinfo Files: 58a37ed7b30e7b053878f786ed0df0e7 47660 science optional fastaq_3.17.0-3_all.deb a107f50cd919204fc8fcd830c8311ebf 6889 science optional fastaq_3.17.0-3_amd64.buildinfo +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ fastaq_3.17.0-3_all.deb ----------------------- new debian package, version 2.0. size 47660 bytes: control archive=3572 bytes. 756 bytes, 16 lines control 8150 bytes, 93 lines md5sums 237 bytes, 12 lines * postinst #!/bin/sh 386 bytes, 12 lines * prerm #!/bin/sh Package: fastaq Version: 3.17.0-3 Architecture: all Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 196 Depends: python3:any, python3-pkg-resources, samtools Section: science Priority: optional Homepage: https://github.com/sanger-pathogens/Fastaq Description: FASTA and FASTQ file manipulation tools Fastaq represents a diverse collection of scripts that perform useful and common FASTA/FASTQ manipulation tasks, such as filtering, merging, splitting, sorting, trimming, search/replace, etc. Input and output files can be gzipped (format is automatically detected) and individual Fastaq commands can be piped together. drwxr-xr-x root/root 0 2020-04-17 09:59 ./ drwxr-xr-x root/root 0 2020-04-17 09:59 ./usr/ drwxr-xr-x root/root 0 2020-04-17 09:59 ./usr/bin/ -rwxr-xr-x root/root 4178 2020-04-17 09:59 ./usr/bin/fastaq drwxr-xr-x root/root 0 2020-04-17 09:59 ./usr/lib/ drwxr-xr-x root/root 0 2020-04-17 09:59 ./usr/lib/python3/ drwxr-xr-x root/root 0 2020-04-17 09:59 ./usr/lib/python3/dist-packages/ drwxr-xr-x root/root 0 2020-04-17 09:59 ./usr/lib/python3/dist-packages/pyfastaq-3.17.0.egg-info/ -rw-r--r-- root/root 534 2020-04-17 09:59 ./usr/lib/python3/dist-packages/pyfastaq-3.17.0.egg-info/PKG-INFO -rw-r--r-- root/root 1 2020-04-17 09:59 ./usr/lib/python3/dist-packages/pyfastaq-3.17.0.egg-info/dependency_links.txt -rw-r--r-- root/root 9 2020-04-17 09:59 ./usr/lib/python3/dist-packages/pyfastaq-3.17.0.egg-info/top_level.txt drwxr-xr-x root/root 0 2020-04-17 09:59 ./usr/lib/python3/dist-packages/pyfastaq/ -rw-r--r-- root/root 284 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/__init__.py -rw-r--r-- root/root 2090 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/caf.py -rw-r--r-- root/root 2546 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/genetic_codes.py -rw-r--r-- root/root 3790 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/intervals.py drwxr-xr-x root/root 0 2020-04-17 09:59 ./usr/lib/python3/dist-packages/pyfastaq/runners/ -rw-r--r-- root/root 0 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/__init__.py -rw-r--r-- root/root 463 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/acgtn_only.py -rw-r--r-- root/root 4215 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/add_indels.py -rw-r--r-- root/root 894 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/caf_to_fastq.py -rw-r--r-- root/root 714 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/capillary_to_pairs.py -rw-r--r-- root/root 1544 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/chunker.py -rw-r--r-- root/root 379 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/count_sequences.py -rw-r--r-- root/root 831 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/deinterleave.py -rw-r--r-- root/root 1089 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/enumerate_names.py -rw-r--r-- root/root 609 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/expand_nucleotides.py -rw-r--r-- root/root 587 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/fasta_to_fastq.py -rw-r--r-- root/root 2082 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/filter.py -rw-r--r-- root/root 433 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/get_ids.py -rw-r--r-- root/root 733 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/get_seq_flanking_gaps.py -rw-r--r-- root/root 871 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/interleave.py -rw-r--r-- root/root 1367 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/make_random_contigs.py -rw-r--r-- root/root 581 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/merge.py -rw-r--r-- root/root 574 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/replace_bases.py -rw-r--r-- root/root 423 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/reverse_complement.py -rw-r--r-- root/root 704 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/scaffolds_to_contigs.py -rw-r--r-- root/root 757 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/search_for_seq.py -rw-r--r-- root/root 1495 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/sequence_trim.py -rw-r--r-- root/root 433 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/sort_by_name.py -rw-r--r-- root/root 618 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/sort_by_size.py -rw-r--r-- root/root 939 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/split_by_base_count.py -rw-r--r-- root/root 429 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/strip_illumina_suffix.py -rw-r--r-- root/root 483 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/to_boulderio.py -rw-r--r-- root/root 596 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/to_fake_qual.py -rw-r--r-- root/root 1114 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/to_fasta.py -rw-r--r-- root/root 428 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/to_mira_xml.py -rw-r--r-- root/root 651 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/to_orfs_gff.py -rw-r--r-- root/root 4237 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/to_perfect_reads.py -rw-r--r-- root/root 1606 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/to_random_subset.py -rw-r--r-- root/root 3207 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/to_tiling_bam.py -rw-r--r-- root/root 593 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/to_unique_by_id.py -rw-r--r-- root/root 627 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/translate.py -rw-r--r-- root/root 507 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/trim_Ns_at_end.py -rw-r--r-- root/root 766 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/trim_contigs.py -rw-r--r-- root/root 648 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/trim_ends.py -rw-r--r-- root/root 71 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/runners/version.py -rw-r--r-- root/root 25087 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/sequences.py -rw-r--r-- root/root 29245 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/tasks.py -rw-r--r-- root/root 2277 2018-02-19 09:37 ./usr/lib/python3/dist-packages/pyfastaq/utils.py drwxr-xr-x root/root 0 2020-04-17 09:59 ./usr/share/ drwxr-xr-x root/root 0 2020-04-17 09:59 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-04-17 09:59 ./usr/share/doc/fastaq/ -rw-r--r-- root/root 812 2020-04-17 09:59 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+------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build-Space: 2772 Build-Time: 13 Distribution: groovy-proposed Host Architecture: amd64 Install-Time: 15 Job: fastaq_3.17.0-3.dsc Machine Architecture: amd64 Package: fastaq Package-Time: 28 Source-Version: 3.17.0-3 Space: 2772 Status: successful Version: 3.17.0-3 -------------------------------------------------------------------------------- Finished at 20200427-1936 Build needed 00:00:28, 2772k disc space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=groovy --arch=amd64 PACKAGEBUILD-19214428 Scanning for processes to kill in build PACKAGEBUILD-19214428