RUN: /usr/share/launchpad-buildd/slavebin/slave-prep ['slave-prep'] Forking launchpad-buildd slave process... Kernel version: Linux lgw01-34 4.4.0-78-generic #99-Ubuntu SMP Thu Apr 27 15:29:09 UTC 2017 x86_64 Buildd toolchain package versions: launchpad-buildd_144 python-lpbuildd_144 sbuild_0.67.0-2ubuntu7 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3 git-build-recipe_0.3.4~git201611291343.dcee459~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.1 dpkg-dev_1.18.4ubuntu1.2 python-debian_0.1.27ubuntu2 qemu-user-static_1:2.5+dfsg-5ubuntu10.14. Syncing the system clock with the buildd NTP service... 7 Jun 11:06:00 ntpdate[1766]: adjust time server 10.211.37.1 offset -0.000763 sec RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', 'PACKAGEBUILD-12704487', '/home/buildd/filecache-default/7fe38ae672de2c40a7e6ba74a0e6690544a5bb48'] Unpacking chroot for build PACKAGEBUILD-12704487 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', 'PACKAGEBUILD-12704487'] Mounting chroot for build PACKAGEBUILD-12704487 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', 'PACKAGEBUILD-12704487', 'deb http://ftpmaster.internal/ubuntu artful main universe', 'deb http://ftpmaster.internal/ubuntu artful-security main universe', 'deb http://ftpmaster.internal/ubuntu artful-updates main universe', 'deb http://ftpmaster.internal/ubuntu artful-proposed main universe'] Overriding sources.list in build-PACKAGEBUILD-12704487 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', 'PACKAGEBUILD-12704487', 'i386'] Updating debian chroot for build PACKAGEBUILD-12704487 Get:1 http://ftpmaster.internal/ubuntu artful InRelease [237 kB] Get:2 http://ftpmaster.internal/ubuntu artful-security InRelease [65.5 kB] Get:3 http://ftpmaster.internal/ubuntu artful-updates InRelease [65.5 kB] Get:4 http://ftpmaster.internal/ubuntu artful-proposed InRelease [235 kB] Get:5 http://ftpmaster.internal/ubuntu artful/main i386 Packages [1174 kB] Get:6 http://ftpmaster.internal/ubuntu artful/main Translation-en [567 kB] Get:7 http://ftpmaster.internal/ubuntu artful/universe i386 Packages [8244 kB] Get:8 http://ftpmaster.internal/ubuntu artful/universe Translation-en [4750 kB] Get:9 http://ftpmaster.internal/ubuntu artful-proposed/main i386 Packages [82.2 kB] Get:10 http://ftpmaster.internal/ubuntu artful-proposed/main Translation-en [37.9 kB] Get:11 http://ftpmaster.internal/ubuntu artful-proposed/universe i386 Packages [124 kB] Get:12 http://ftpmaster.internal/ubuntu artful-proposed/universe Translation-en [67.9 kB] Fetched 15.6 MB in 5s (2622 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following NEW packages will be installed: gcc-7-base The following packages will be upgraded: advancecomp apt apt-transport-https bash binutils bsdutils ca-certificates cpp-6 debianutils dmsetup dpkg dpkg-dev g++-6 gcc-6 gcc-6-base init init-system-helpers libapparmor1 libapt-pkg5.0 libasan3 libasn1-8-heimdal libatomic1 libaudit-common libaudit1 libblkid1 libcc1-0 libcilkrts5 libdevmapper1.02.1 libdpkg-perl libfdisk1 libgcc-6-dev libgcc1 libgcrypt20 libgnutls30 libgomp1 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libitm1 libkmod2 libkrb5-26-heimdal libldap-2.4-2 libldap-common libmount1 libmpx2 libperl5.24 libquadmath0 libroken18-heimdal libselinux1 libsemanage-common libsemanage1 libsmartcols1 libsqlite3-0 libssl1.0.0 libstdc++-6-dev libstdc++6 libsystemd0 libtasn1-6 libubsan0 libudev1 libusb-0.1-4 libuuid1 libwind0-heimdal linux-libc-dev login mount openssl passwd perl perl-base perl-modules-5.24 systemd systemd-sysv util-linux 76 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 53.3 MB of archives. After this operation, 1312 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu artful/main i386 debianutils i386 4.8.1.1 [85.7 kB] Get:2 http://ftpmaster.internal/ubuntu artful/main i386 bash i386 4.4-5ubuntu1 [622 kB] Get:3 http://ftpmaster.internal/ubuntu artful/main i386 bsdutils i386 1:2.29-1ubuntu3 [57.9 kB] Get:4 http://ftpmaster.internal/ubuntu artful/main i386 dpkg i386 1.18.24ubuntu1 [1164 kB] Get:5 http://ftpmaster.internal/ubuntu artful/main i386 login i386 1:4.2-3.2ubuntu2 [306 kB] Get:6 http://ftpmaster.internal/ubuntu artful/main i386 util-linux i386 2.29-1ubuntu3 [952 kB] Get:7 http://ftpmaster.internal/ubuntu artful/main i386 mount i386 2.29-1ubuntu3 [137 kB] Get:8 http://ftpmaster.internal/ubuntu artful-proposed/main i386 libperl5.24 i386 5.24.1-3ubuntu1 [3097 kB] Get:9 http://ftpmaster.internal/ubuntu artful-proposed/main i386 perl i386 5.24.1-3ubuntu1 [219 kB] Get:10 http://ftpmaster.internal/ubuntu artful-proposed/main i386 perl-base i386 5.24.1-3ubuntu1 [1440 kB] Get:11 http://ftpmaster.internal/ubuntu artful-proposed/main i386 perl-modules-5.24 all 5.24.1-3ubuntu1 [2662 kB] Get:12 http://ftpmaster.internal/ubuntu artful-proposed/main i386 init-system-helpers all 1.48 [37.8 kB] Get:13 http://ftpmaster.internal/ubuntu artful/main i386 gcc-7-base i386 7.1.0-6ubuntu2 [18.8 kB] Get:14 http://ftpmaster.internal/ubuntu artful/main i386 libgcc1 i386 1:7.1.0-6ubuntu2 [46.9 kB] Get:15 http://ftpmaster.internal/ubuntu artful/main i386 libstdc++6 i386 7.1.0-6ubuntu2 [436 kB] Get:16 http://ftpmaster.internal/ubuntu artful-proposed/main i386 libapt-pkg5.0 i386 1.4.6 [854 kB] Get:17 http://ftpmaster.internal/ubuntu artful-proposed/main i386 apt i386 1.4.6 [1130 kB] Get:18 http://ftpmaster.internal/ubuntu artful-proposed/main i386 libapparmor1 i386 2.11.0-2ubuntu8 [31.2 kB] Get:19 http://ftpmaster.internal/ubuntu artful/main i386 libaudit-common all 1:2.6.6-1ubuntu2 [4626 B] Get:20 http://ftpmaster.internal/ubuntu artful/main i386 libaudit1 i386 1:2.6.6-1ubuntu2 [38.7 kB] Get:21 http://ftpmaster.internal/ubuntu artful/main i386 libselinux1 i386 2.6-3build1 [73.0 kB] Get:22 http://ftpmaster.internal/ubuntu artful/main i386 libsemanage-common all 2.6-2build1 [6738 B] Get:23 http://ftpmaster.internal/ubuntu artful/main i386 libsemanage1 i386 2.6-2build1 [89.9 kB] Get:24 http://ftpmaster.internal/ubuntu artful/main i386 passwd i386 1:4.2-3.2ubuntu2 [790 kB] Get:25 http://ftpmaster.internal/ubuntu artful/main i386 libuuid1 i386 2.29-1ubuntu3 [15.8 kB] Get:26 http://ftpmaster.internal/ubuntu artful/main i386 libblkid1 i386 2.29-1ubuntu3 [125 kB] Get:27 http://ftpmaster.internal/ubuntu artful-proposed/main i386 libgcrypt20 i386 1.7.6-2 [373 kB] Get:28 http://ftpmaster.internal/ubuntu artful/main i386 libkmod2 i386 24-1ubuntu1 [46.0 kB] Get:29 http://ftpmaster.internal/ubuntu artful/main i386 libmount1 i386 2.29-1ubuntu3 [131 kB] Get:30 http://ftpmaster.internal/ubuntu artful/main i386 systemd i386 233-6ubuntu3 [2488 kB] Get:31 http://ftpmaster.internal/ubuntu artful/main i386 libsystemd0 i386 233-6ubuntu3 [228 kB] Get:32 http://ftpmaster.internal/ubuntu artful-proposed/main i386 init i386 1.48 [5806 B] Get:33 http://ftpmaster.internal/ubuntu artful/main i386 systemd-sysv i386 233-6ubuntu3 [13.0 kB] Get:34 http://ftpmaster.internal/ubuntu artful/main i386 libfdisk1 i386 2.29-1ubuntu3 [160 kB] Get:35 http://ftpmaster.internal/ubuntu artful/main i386 libsmartcols1 i386 2.29-1ubuntu3 [76.1 kB] Get:36 http://ftpmaster.internal/ubuntu artful/main i386 libudev1 i386 233-6ubuntu3 [60.2 kB] Get:37 http://ftpmaster.internal/ubuntu artful/main i386 libdevmapper1.02.1 i386 2:1.02.137-2ubuntu2 [146 kB] Get:38 http://ftpmaster.internal/ubuntu artful/main i386 dmsetup i386 2:1.02.137-2ubuntu2 [72.9 kB] Get:39 http://ftpmaster.internal/ubuntu artful/main i386 libroken18-heimdal i386 7.1.0+dfsg-13 [44.4 kB] Get:40 http://ftpmaster.internal/ubuntu artful/main i386 libasn1-8-heimdal i386 7.1.0+dfsg-13 [187 kB] Get:41 http://ftpmaster.internal/ubuntu artful/main i386 libtasn1-6 i386 4.10-1.1 [38.5 kB] Get:42 http://ftpmaster.internal/ubuntu artful/main i386 libgnutls30 i386 3.5.8-5ubuntu1 [693 kB] Get:43 http://ftpmaster.internal/ubuntu artful/main i386 libheimbase1-heimdal i386 7.1.0+dfsg-13 [31.9 kB] Get:44 http://ftpmaster.internal/ubuntu artful/main i386 libhcrypto4-heimdal i386 7.1.0+dfsg-13 [93.4 kB] Get:45 http://ftpmaster.internal/ubuntu artful/main i386 libwind0-heimdal i386 7.1.0+dfsg-13 [48.6 kB] Get:46 http://ftpmaster.internal/ubuntu artful/main i386 libhx509-5-heimdal i386 7.1.0+dfsg-13 [118 kB] Get:47 http://ftpmaster.internal/ubuntu artful-proposed/main i386 libsqlite3-0 i386 3.16.2-4 [519 kB] Get:48 http://ftpmaster.internal/ubuntu artful/main i386 libkrb5-26-heimdal i386 7.1.0+dfsg-13 [232 kB] Get:49 http://ftpmaster.internal/ubuntu artful/main i386 libheimntlm0-heimdal i386 7.1.0+dfsg-13 [16.6 kB] Get:50 http://ftpmaster.internal/ubuntu artful/main i386 libgssapi3-heimdal i386 7.1.0+dfsg-13 [108 kB] Get:51 http://ftpmaster.internal/ubuntu artful/main i386 libldap-2.4-2 i386 2.4.44+dfsg-5ubuntu1 [168 kB] Get:52 http://ftpmaster.internal/ubuntu artful/main i386 libldap-common all 2.4.44+dfsg-5ubuntu1 [17.5 kB] Get:53 http://ftpmaster.internal/ubuntu artful/main i386 libssl1.0.0 i386 1.0.2g-1ubuntu13 [910 kB] Get:54 http://ftpmaster.internal/ubuntu artful-proposed/main i386 apt-transport-https i386 1.4.6 [38.0 kB] Get:55 http://ftpmaster.internal/ubuntu artful/main i386 openssl i386 1.0.2g-1ubuntu13 [506 kB] Get:56 http://ftpmaster.internal/ubuntu artful/main i386 ca-certificates all 20161130+nmu1 [186 kB] Get:57 http://ftpmaster.internal/ubuntu artful-proposed/main i386 advancecomp i386 1.23-1 [189 kB] Get:58 http://ftpmaster.internal/ubuntu artful-proposed/main i386 binutils i386 2.28-5ubuntu1 [2532 kB] Get:59 http://ftpmaster.internal/ubuntu artful/main i386 libquadmath0 i386 7.1.0-6ubuntu2 [204 kB] Get:60 http://ftpmaster.internal/ubuntu artful/main i386 libitm1 i386 7.1.0-6ubuntu2 [30.3 kB] Get:61 http://ftpmaster.internal/ubuntu artful/main i386 libmpx2 i386 7.1.0-6ubuntu2 [13.0 kB] Get:62 http://ftpmaster.internal/ubuntu artful/main i386 libubsan0 i386 7.1.0-6ubuntu2 [134 kB] Get:63 http://ftpmaster.internal/ubuntu artful/main i386 libcilkrts5 i386 7.1.0-6ubuntu2 [47.4 kB] Get:64 http://ftpmaster.internal/ubuntu artful/main i386 libgomp1 i386 7.1.0-6ubuntu2 [80.2 kB] Get:65 http://ftpmaster.internal/ubuntu artful/main i386 libatomic1 i386 7.1.0-6ubuntu2 [9694 B] Get:66 http://ftpmaster.internal/ubuntu artful/main i386 libasan3 i386 6.3.0-18ubuntu2 [308 kB] Get:67 http://ftpmaster.internal/ubuntu artful/main i386 g++-6 i386 6.3.0-18ubuntu2 [7652 kB] Get:68 http://ftpmaster.internal/ubuntu artful/main i386 libstdc++-6-dev i386 6.3.0-18ubuntu2 [1454 kB] Get:69 http://ftpmaster.internal/ubuntu artful/main i386 gcc-6 i386 6.3.0-18ubuntu2 [7469 kB] Get:70 http://ftpmaster.internal/ubuntu artful/main i386 libgcc-6-dev i386 6.3.0-18ubuntu2 [2333 kB] Get:71 http://ftpmaster.internal/ubuntu artful/main i386 libcc1-0 i386 7.1.0-6ubuntu2 [41.2 kB] Get:72 http://ftpmaster.internal/ubuntu artful/main i386 cpp-6 i386 6.3.0-18ubuntu2 [6850 kB] Get:73 http://ftpmaster.internal/ubuntu artful/main i386 gcc-6-base i386 6.3.0-18ubuntu2 [17.2 kB] Get:74 http://ftpmaster.internal/ubuntu artful/main i386 dpkg-dev all 1.18.24ubuntu1 [608 kB] Get:75 http://ftpmaster.internal/ubuntu artful/main i386 libdpkg-perl all 1.18.24ubuntu1 [209 kB] Get:76 http://ftpmaster.internal/ubuntu artful/main i386 libusb-0.1-4 i386 2:0.1.12-31 [17.7 kB] Get:77 http://ftpmaster.internal/ubuntu artful-proposed/main i386 linux-libc-dev i386 4.11.0-5.10 [915 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 53.3 MB in 3s (14.9 MB/s) (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12472 files and directories currently installed.) Preparing to unpack .../libselinux1_2.6-3build1_i386.deb ... Unpacking libselinux1:i386 (2.6-3build1) over (2.6-3) ... Setting up libselinux1:i386 (2.6-3build1) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12472 files and directories currently installed.) Preparing to unpack .../libsemanage1_2.6-2build1_i386.deb ... Unpacking libsemanage1:i386 (2.6-2build1) over (2.6-2) ... Setting up libsemanage1:i386 (2.6-2build1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12472 files and directories currently installed.) Preparing to unpack .../passwd_1%3a4.2-3.2ubuntu2_i386.deb ... Unpacking passwd (1:4.2-3.2ubuntu2) over (1:4.2-3.2ubuntu1) ... Setting up passwd (1:4.2-3.2ubuntu2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12472 files and directories currently installed.) Preparing to unpack .../libuuid1_2.29-1ubuntu3_i386.deb ... Unpacking libuuid1:i386 (2.29-1ubuntu3) over (2.29-1ubuntu2) ... Setting up libuuid1:i386 (2.29-1ubuntu3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12472 files and directories currently installed.) Preparing to unpack .../libblkid1_2.29-1ubuntu3_i386.deb ... Unpacking libblkid1:i386 (2.29-1ubuntu3) over (2.29-1ubuntu2) ... Setting up libblkid1:i386 (2.29-1ubuntu3) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12472 files and directories currently installed.) Preparing to unpack .../libkmod2_24-1ubuntu1_i386.deb ... Unpacking libkmod2:i386 (24-1ubuntu1) over (22-1.1ubuntu1) ... Preparing to unpack .../libmount1_2.29-1ubuntu3_i386.deb ... Unpacking libmount1:i386 (2.29-1ubuntu3) over (2.29-1ubuntu2) ... Setting up libmount1:i386 (2.29-1ubuntu3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12472 files and directories currently installed.) Preparing to unpack .../systemd_233-6ubuntu3_i386.deb ... Unpacking systemd (233-6ubuntu3) over (232-21ubuntu3) ... dpkg: warning: unable to delete old directory '/etc/dbus-1/system.d': Directory not empty dpkg: warning: unable to delete old directory '/etc/dbus-1': Directory not empty Preparing to unpack .../libsystemd0_233-6ubuntu3_i386.deb ... Unpacking libsystemd0:i386 (233-6ubuntu3) over (232-21ubuntu3) ... Setting up libsystemd0:i386 (233-6ubuntu3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12498 files and directories currently installed.) Preparing to unpack .../archives/init_1.48_i386.deb ... Unpacking init (1.48) over (1.47) ... Setting up libapparmor1:i386 (2.11.0-2ubuntu8) ... Setting up libkmod2:i386 (24-1ubuntu1) ... Setting up systemd (233-6ubuntu3) ... Installing new version of config file /etc/systemd/resolved.conf ... addgroup: The group `systemd-journal' already exists as a system group. Exiting. Removing obsolete conffile /etc/dbus-1/system.d/org.freedesktop.hostname1.conf ... Removing obsolete conffile /etc/dbus-1/system.d/org.freedesktop.locale1.conf ... Removing obsolete conffile /etc/dbus-1/system.d/org.freedesktop.login1.conf ... Removing obsolete conffile /etc/dbus-1/system.d/org.freedesktop.network1.conf ... Removing obsolete conffile /etc/dbus-1/system.d/org.freedesktop.resolve1.conf ... Removing obsolete conffile /etc/dbus-1/system.d/org.freedesktop.systemd1.conf ... Removing obsolete conffile /etc/dbus-1/system.d/org.freedesktop.timedate1.conf ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12498 files and directories currently installed.) Preparing to unpack .../libudev1_233-6ubuntu3_i386.deb ... Unpacking libudev1:i386 (233-6ubuntu3) over (232-21ubuntu3) ... Setting up libudev1:i386 (233-6ubuntu3) ... (Reading database ... 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Unpacking libroken18-heimdal:i386 (7.1.0+dfsg-13) over (7.1.0+dfsg-9ubuntu1) ... Preparing to unpack .../03-libasn1-8-heimdal_7.1.0+dfsg-13_i386.deb ... Unpacking libasn1-8-heimdal:i386 (7.1.0+dfsg-13) over (7.1.0+dfsg-9ubuntu1) ... Preparing to unpack .../04-libtasn1-6_4.10-1.1_i386.deb ... Unpacking libtasn1-6:i386 (4.10-1.1) over (4.10-1) ... Preparing to unpack .../05-libgnutls30_3.5.8-5ubuntu1_i386.deb ... Unpacking libgnutls30:i386 (3.5.8-5ubuntu1) over (3.5.6-4ubuntu4) ... Preparing to unpack .../06-libheimbase1-heimdal_7.1.0+dfsg-13_i386.deb ... Unpacking libheimbase1-heimdal:i386 (7.1.0+dfsg-13) over (7.1.0+dfsg-9ubuntu1) ... Preparing to unpack .../07-libhcrypto4-heimdal_7.1.0+dfsg-13_i386.deb ... Unpacking libhcrypto4-heimdal:i386 (7.1.0+dfsg-13) over (7.1.0+dfsg-9ubuntu1) ... Preparing to unpack .../08-libwind0-heimdal_7.1.0+dfsg-13_i386.deb ... Unpacking libwind0-heimdal:i386 (7.1.0+dfsg-13) over (7.1.0+dfsg-9ubuntu1) ... 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Unpacking g++-6 (6.3.0-18ubuntu2) over (6.3.0-14ubuntu3) ... Preparing to unpack .../31-libstdc++-6-dev_6.3.0-18ubuntu2_i386.deb ... Unpacking libstdc++-6-dev:i386 (6.3.0-18ubuntu2) over (6.3.0-14ubuntu3) ... Preparing to unpack .../32-gcc-6_6.3.0-18ubuntu2_i386.deb ... Unpacking gcc-6 (6.3.0-18ubuntu2) over (6.3.0-14ubuntu3) ... Preparing to unpack .../33-libgcc-6-dev_6.3.0-18ubuntu2_i386.deb ... Unpacking libgcc-6-dev:i386 (6.3.0-18ubuntu2) over (6.3.0-14ubuntu3) ... Preparing to unpack .../34-libcc1-0_7.1.0-6ubuntu2_i386.deb ... Unpacking libcc1-0:i386 (7.1.0-6ubuntu2) over (6.3.0-14ubuntu3) ... Preparing to unpack .../35-cpp-6_6.3.0-18ubuntu2_i386.deb ... Unpacking cpp-6 (6.3.0-18ubuntu2) over (6.3.0-14ubuntu3) ... Preparing to unpack .../36-gcc-6-base_6.3.0-18ubuntu2_i386.deb ... Unpacking gcc-6-base:i386 (6.3.0-18ubuntu2) over (6.3.0-14ubuntu3) ... Preparing to unpack .../37-dpkg-dev_1.18.24ubuntu1_all.deb ... Unpacking dpkg-dev (1.18.24ubuntu1) over (1.18.23ubuntu4) ... Preparing to unpack .../38-libdpkg-perl_1.18.24ubuntu1_all.deb ... Unpacking libdpkg-perl (1.18.24ubuntu1) over (1.18.23ubuntu4) ... Preparing to unpack .../39-libusb-0.1-4_2%3a0.1.12-31_i386.deb ... Unpacking libusb-0.1-4:i386 (2:0.1.12-31) over (2:0.1.12-30) ... Preparing to unpack .../40-linux-libc-dev_4.11.0-5.10_i386.deb ... Unpacking linux-libc-dev:i386 (4.11.0-5.10) over (4.10.0-20.22) ... Setting up libquadmath0:i386 (7.1.0-6ubuntu2) ... Setting up libgomp1:i386 (7.1.0-6ubuntu2) ... Setting up libatomic1:i386 (7.1.0-6ubuntu2) ... Setting up perl-modules-5.24 (5.24.1-3ubuntu1) ... Setting up libperl5.24:i386 (5.24.1-3ubuntu1) ... Setting up libcc1-0:i386 (7.1.0-6ubuntu2) ... Setting up apt-transport-https (1.4.6) ... Setting up libssl1.0.0:i386 (1.0.2g-1ubuntu13) ... Setting up libldap-common (2.4.44+dfsg-5ubuntu1) ... Setting up libcilkrts5:i386 (7.1.0-6ubuntu2) ... Setting up systemd-sysv (233-6ubuntu3) ... Setting up libubsan0:i386 (7.1.0-6ubuntu2) ... Setting up gcc-6-base:i386 (6.3.0-18ubuntu2) ... Setting up linux-libc-dev:i386 (4.11.0-5.10) ... Setting up advancecomp (1.23-1) ... Setting up libroken18-heimdal:i386 (7.1.0+dfsg-13) ... Setting up libdevmapper1.02.1:i386 (2:1.02.137-2ubuntu2) ... Setting up libtasn1-6:i386 (4.10-1.1) ... Setting up perl (5.24.1-3ubuntu1) ... Setting up libmpx2:i386 (7.1.0-6ubuntu2) ... Processing triggers for libc-bin (2.24-9ubuntu2) ... Setting up libheimbase1-heimdal:i386 (7.1.0+dfsg-13) ... Setting up openssl (1.0.2g-1ubuntu13) ... Setting up libsqlite3-0:i386 (3.16.2-4) ... Setting up dmsetup (2:1.02.137-2ubuntu2) ... Setting up binutils (2.28-5ubuntu1) ... Setting up cpp-6 (6.3.0-18ubuntu2) ... Setting up ca-certificates (20161130+nmu1) ... Updating certificates in /etc/ssl/certs... 0 added, 7 removed; done. Setting up libusb-0.1-4:i386 (2:0.1.12-31) ... Setting up libitm1:i386 (7.1.0-6ubuntu2) ... Setting up libasan3:i386 (6.3.0-18ubuntu2) ... Setting up libgcc-6-dev:i386 (6.3.0-18ubuntu2) ... Setting up libstdc++-6-dev:i386 (6.3.0-18ubuntu2) ... Setting up libwind0-heimdal:i386 (7.1.0+dfsg-13) ... Setting up init (1.48) ... Setting up libasn1-8-heimdal:i386 (7.1.0+dfsg-13) ... Setting up libhcrypto4-heimdal:i386 (7.1.0+dfsg-13) ... Setting up libgnutls30:i386 (3.5.8-5ubuntu1) ... Setting up libdpkg-perl (1.18.24ubuntu1) ... Setting up libhx509-5-heimdal:i386 (7.1.0+dfsg-13) ... Setting up gcc-6 (6.3.0-18ubuntu2) ... Setting up g++-6 (6.3.0-18ubuntu2) ... Setting up dpkg-dev (1.18.24ubuntu1) ... Setting up libkrb5-26-heimdal:i386 (7.1.0+dfsg-13) ... Setting up libheimntlm0-heimdal:i386 (7.1.0+dfsg-13) ... Setting up libgssapi3-heimdal:i386 (7.1.0+dfsg-13) ... Setting up libldap-2.4-2:i386 (2.4.44+dfsg-5ubuntu1) ... Processing triggers for libc-bin (2.24-9ubuntu2) ... Processing triggers for ca-certificates (20161130+nmu1) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', 'PACKAGEBUILD-12704487', 'i386', 'artful-proposed', '-c', 'chroot:autobuild', '--arch=i386', '--dist=artful-proposed', '--purge=never', '--nolog', 'fastx-toolkit_0.0.14-4.dsc'] Initiating build PACKAGEBUILD-12704487 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-78-generic #99-Ubuntu SMP Thu Apr 27 15:29:09 UTC 2017 i686 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on lgw01-34.buildd +==============================================================================+ | fastx-toolkit 0.0.14-4 (i386) 07 Jun 2017 11:06 | +==============================================================================+ Package: fastx-toolkit Version: 0.0.14-4 Source Version: 0.0.14-4 Distribution: artful-proposed Machine Architecture: amd64 Host Architecture: i386 Build Architecture: i386 I: NOTICE: Log filtering will replace 'build/fastx-toolkit-bUtKQl/fastx-toolkit-0.0.14' with '<>' I: NOTICE: Log filtering will replace 'build/fastx-toolkit-bUtKQl' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-12704487/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- fastx-toolkit_0.0.14-4.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-Sar8CM/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-Sar8CM/apt_archive ./ InRelease Get:2 copy:/<>/resolver-Sar8CM/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-Sar8CM/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-Sar8CM/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-Sar8CM/apt_archive ./ Packages [524 B] Fetched 2857 B in 0s (134 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 778 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-Sar8CM/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [778 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 778 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12503 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_i386.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper (>= 10), automake, autotools-dev, libtool, pkg-config, libgtextutils-dev, help2man, libgd-graph-perl, libperlio-gzip-perl Filtered Build-Depends: debhelper (>= 10), automake, autotools-dev, libtool, pkg-config, libgtextutils-dev, help2man, libgd-graph-perl, libperlio-gzip-perl dpkg-deb: building package 'sbuild-build-depends-fastx-toolkit-dummy' in '/<>/resolver-CropW8/apt_archive/sbuild-build-depends-fastx-toolkit-dummy.deb'. Ign:1 copy:/<>/resolver-CropW8/apt_archive ./ InRelease Get:2 copy:/<>/resolver-CropW8/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-CropW8/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-CropW8/apt_archive ./ Sources [270 B] Get:5 copy:/<>/resolver-CropW8/apt_archive ./ Packages [590 B] Fetched 2979 B in 0s (140 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install fastx-toolkit build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism file fontconfig-config fonts-dejavu-core gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libbsd0 libcroco3 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgd-graph-perl libgd-perl libgd-text-perl libgd3 libglib2.0-0 libgtextutils-dev libgtextutils0v5 libicu57 libjbig0 libjpeg-turbo8 libjpeg8 liblocale-gettext-perl libmagic-mgc libmagic1 libperlio-gzip-perl libpipeline1 libsigsegv2 libtiff5 libtimedate-perl libtool libwebp6 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxml2 libxpm4 m4 man-db pkg-config po-debconf ucf Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff fonts-dustin libgd-tools libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc less www-browser libmail-box-perl Recommended packages: curl | wget | lynx-cur libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev xml-core libmail-sendmail-perl The following packages will be REMOVED: pkg-create-dbgsym* The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism file fontconfig-config fonts-dejavu-core gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libbsd0 libcroco3 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgd-graph-perl libgd-perl libgd-text-perl libgd3 libglib2.0-0 libgtextutils-dev libgtextutils0v5 libicu57 libjbig0 libjpeg-turbo8 libjpeg8 liblocale-gettext-perl libmagic-mgc libmagic1 libperlio-gzip-perl libpipeline1 libsigsegv2 libtiff5 libtimedate-perl libtool libwebp6 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxml2 libxpm4 m4 man-db pkg-config po-debconf sbuild-build-depends-fastx-toolkit-dummy ucf 0 upgraded, 57 newly installed, 1 to remove and 0 not upgraded. Need to get 20.5 MB of archives. After this operation, 75.0 MB of additional disk space will be used. 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i386 libmagic-mgc i386 1:5.30-1 [181 kB] Get:12 http://ftpmaster.internal/ubuntu artful/main i386 libmagic1 i386 1:5.30-1 [74.3 kB] Get:13 http://ftpmaster.internal/ubuntu artful/main i386 file i386 1:5.30-1 [21.7 kB] Get:14 http://ftpmaster.internal/ubuntu artful/main i386 libexpat1 i386 2.2.0-2 [75.0 kB] Get:15 http://ftpmaster.internal/ubuntu artful/main i386 ucf all 3.0036 [52.9 kB] Get:16 http://ftpmaster.internal/ubuntu artful/main i386 gettext-base i386 0.19.8.1-2ubuntu1 [48.9 kB] Get:17 http://ftpmaster.internal/ubuntu artful/main i386 libglib2.0-0 i386 2.53.1-1 [1219 kB] Get:18 http://ftpmaster.internal/ubuntu artful/main i386 libicu57 i386 57.1-6 [7837 kB] Get:19 http://ftpmaster.internal/ubuntu artful/main i386 libxdmcp6 i386 1:1.1.2-3 [11.1 kB] Get:20 http://ftpmaster.internal/ubuntu artful/main i386 libxcb1 i386 1.11.1-1ubuntu1 [44.1 kB] Get:21 http://ftpmaster.internal/ubuntu artful/main i386 libx11-data all 2:1.6.4-3 [114 kB] Get:22 http://ftpmaster.internal/ubuntu artful/main i386 libx11-6 i386 2:1.6.4-3 [594 kB] Get:23 http://ftpmaster.internal/ubuntu artful/main i386 libxml2 i386 2.9.4+dfsg1-2.2ubuntu1 [733 kB] Get:24 http://ftpmaster.internal/ubuntu artful/main i386 libsigsegv2 i386 2.10-5 [14.3 kB] Get:25 http://ftpmaster.internal/ubuntu artful/main i386 m4 i386 1.4.18-1 [196 kB] Get:26 http://ftpmaster.internal/ubuntu artful/main i386 autoconf all 2.69-10 [321 kB] Get:27 http://ftpmaster.internal/ubuntu artful/main i386 autotools-dev all 20161112.1 [39.5 kB] Get:28 http://ftpmaster.internal/ubuntu artful/main i386 automake all 1:1.15-6ubuntu1 [509 kB] Get:29 http://ftpmaster.internal/ubuntu artful/main i386 autopoint all 0.19.8.1-2ubuntu1 [411 kB] Get:30 http://ftpmaster.internal/ubuntu artful/main i386 libtool all 2.4.6-2 [194 kB] Get:31 http://ftpmaster.internal/ubuntu artful/main i386 dh-autoreconf all 14 [15.5 kB] Get:32 http://ftpmaster.internal/ubuntu artful/main i386 libarchive-zip-perl all 1.59-1 [84.0 kB] Get:33 http://ftpmaster.internal/ubuntu artful/main i386 libfile-stripnondeterminism-perl all 0.034-1 [12.8 kB] Get:34 http://ftpmaster.internal/ubuntu artful/main i386 libtimedate-perl all 2.3000-2 [37.5 kB] Get:35 http://ftpmaster.internal/ubuntu artful/main i386 dh-strip-nondeterminism all 0.034-1 [5010 B] Get:36 http://ftpmaster.internal/ubuntu artful/main i386 libcroco3 i386 0.6.11-3 [87.2 kB] Get:37 http://ftpmaster.internal/ubuntu artful/main i386 gettext i386 0.19.8.1-2ubuntu1 [1088 kB] Get:38 http://ftpmaster.internal/ubuntu artful/main i386 intltool-debian all 0.35.0+20060710.4 [24.9 kB] Get:39 http://ftpmaster.internal/ubuntu artful/main i386 po-debconf all 1.0.20 [232 kB] Get:40 http://ftpmaster.internal/ubuntu artful/main i386 debhelper all 10.4ubuntu3 [876 kB] Get:41 http://ftpmaster.internal/ubuntu artful/main i386 fonts-dejavu-core all 2.37-1 [1041 kB] Get:42 http://ftpmaster.internal/ubuntu artful/main i386 fontconfig-config all 2.11.94-0ubuntu2 [49.9 kB] Get:43 http://ftpmaster.internal/ubuntu artful/universe i386 help2man i386 1.47.4 [155 kB] Get:44 http://ftpmaster.internal/ubuntu artful/main i386 libfreetype6 i386 2.6.3-3.2ubuntu1 [336 kB] Get:45 http://ftpmaster.internal/ubuntu artful/main i386 libfontconfig1 i386 2.11.94-0ubuntu2 [140 kB] Get:46 http://ftpmaster.internal/ubuntu artful/main i386 libjpeg8 i386 8c-2ubuntu8 [2188 B] Get:47 http://ftpmaster.internal/ubuntu artful/main i386 libtiff5 i386 4.0.8-2 [161 kB] Get:48 http://ftpmaster.internal/ubuntu artful/main i386 libwebp6 i386 0.5.2-1 [182 kB] Get:49 http://ftpmaster.internal/ubuntu artful/main i386 libxpm4 i386 1:3.5.12-1 [35.8 kB] Get:50 http://ftpmaster.internal/ubuntu artful/main i386 libgd3 i386 2.2.4-2 [113 kB] Get:51 http://ftpmaster.internal/ubuntu artful/universe i386 libgtextutils0v5 i386 0.7-4 [19.4 kB] Get:52 http://ftpmaster.internal/ubuntu artful/universe i386 libgtextutils-dev i386 0.7-4 [23.1 kB] Get:53 http://ftpmaster.internal/ubuntu artful/main i386 libperlio-gzip-perl i386 0.19-1build2 [14.6 kB] Get:54 http://ftpmaster.internal/ubuntu artful/main i386 pkg-config i386 0.29.1-0ubuntu2 [45.8 kB] Get:55 http://ftpmaster.internal/ubuntu artful/main i386 libgd-perl i386 2.53-3build1 [165 kB] Get:56 http://ftpmaster.internal/ubuntu artful/main i386 libgd-text-perl all 0.86-9 [36.3 kB] Get:57 http://ftpmaster.internal/ubuntu artful/main i386 libgd-graph-perl all 1.48-2 [379 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 20.5 MB in 0s (22.8 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12503 files and directories currently installed.) Removing pkg-create-dbgsym (0.73) ... Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 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Unpacking sbuild-build-depends-fastx-toolkit-dummy (0.invalid.0) ... Setting up libexpat1:i386 (2.2.0-2) ... Setting up libarchive-zip-perl (1.59-1) ... Setting up libperlio-gzip-perl (0.19-1build2) ... Setting up libtimedate-perl (2.3000-2) ... Setting up libjbig0:i386 (2.1-3.1) ... Setting up libsigsegv2:i386 (2.10-5) ... Setting up fonts-dejavu-core (2.37-1) ... Setting up libgtextutils0v5:i386 (0.7-4) ... Setting up groff-base (1.22.3-9) ... Setting up libglib2.0-0:i386 (2.53.1-1) ... No schema files found: doing nothing. Setting up gettext-base (0.19.8.1-2ubuntu1) ... Setting up libjpeg-turbo8:i386 (1.5.1-0ubuntu1) ... Setting up libpipeline1:i386 (1.4.1-2) ... Setting up m4 (1.4.18-1) ... Setting up libicu57:i386 (57.1-6) ... Setting up libbsd0:i386 (0.8.3-1) ... Setting up ucf (3.0036) ... Setting up libxml2:i386 (2.9.4+dfsg1-2.2ubuntu1) ... Setting up libfreetype6:i386 (2.6.3-3.2ubuntu1) ... Setting up libmagic-mgc (1:5.30-1) ... Setting up libmagic1:i386 (1:5.30-1) ... Setting up libcroco3:i386 (0.6.11-3) ... Setting up pkg-config (0.29.1-0ubuntu2) ... Processing triggers for libc-bin (2.24-9ubuntu2) ... Setting up autotools-dev (20161112.1) ... Setting up libgtextutils-dev:i386 (0.7-4) ... Setting up liblocale-gettext-perl (1.07-3build1) ... Setting up libxdmcp6:i386 (1:1.1.2-3) ... Setting up bsdmainutils (9.0.12ubuntu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libx11-data (2:1.6.4-3) ... Setting up libxau6:i386 (1:1.0.8-1) ... Setting up autopoint (0.19.8.1-2ubuntu1) ... Setting up libwebp6:i386 (0.5.2-1) ... Setting up libfile-stripnondeterminism-perl (0.034-1) ... Setting up libjpeg8:i386 (8c-2ubuntu8) ... Setting up fontconfig-config (2.11.94-0ubuntu2) ... Setting up gettext (0.19.8.1-2ubuntu1) ... Setting up libtiff5:i386 (4.0.8-2) ... Setting up autoconf (2.69-10) ... Setting up file (1:5.30-1) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up automake (1:1.15-6ubuntu1) ... update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode Setting up help2man (1.47.4) ... Setting up man-db (2.7.6.1-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libxcb1:i386 (1.11.1-1ubuntu1) ... Setting up libtool (2.4.6-2) ... Setting up libfontconfig1:i386 (2.11.94-0ubuntu2) ... Setting up po-debconf (1.0.20) ... Setting up libx11-6:i386 (2:1.6.4-3) ... Setting up libxpm4:i386 (1:3.5.12-1) ... Setting up libgd3:i386 (2.2.4-2) ... Setting up libgd-perl (2.53-3build1) ... Setting up libgd-text-perl (0.86-9) ... Setting up libgd-graph-perl (1.48-2) ... Setting up dh-autoreconf (14) ... Setting up debhelper (10.4ubuntu3) ... Setting up dh-strip-nondeterminism (0.034-1) ... Setting up sbuild-build-depends-fastx-toolkit-dummy (0.invalid.0) ... (Reading database ... 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Processing triggers for libc-bin (2.24-9ubuntu2) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-78-generic amd64 (i686) Toolchain package versions: binutils_2.28-5ubuntu1 dpkg-dev_1.18.24ubuntu1 g++-6_6.3.0-18ubuntu2 gcc-6_6.3.0-18ubuntu2 libc6-dev_2.24-9ubuntu2 libstdc++-6-dev_6.3.0-18ubuntu2 libstdc++6_7.1.0-6ubuntu2 linux-libc-dev_4.11.0-5.10 Package versions: adduser_3.113+nmu3ubuntu5 advancecomp_1.23-1 apt_1.4.6 apt-transport-https_1.4.6 autoconf_2.69-10 automake_1:1.15-6ubuntu1 autopoint_0.19.8.1-2ubuntu1 autotools-dev_20161112.1 base-files_9.6ubuntu99 base-passwd_3.5.43 bash_4.4-5ubuntu1 binutils_2.28-5ubuntu1 bsdmainutils_9.0.12ubuntu1 bsdutils_1:2.29-1ubuntu3 build-essential_12.1ubuntu2 bzip2_1.0.6-8.1 ca-certificates_20161130+nmu1 coreutils_8.26-3ubuntu3 cpp_4:6.3.0-2ubuntu1 cpp-6_6.3.0-18ubuntu2 dash_0.5.8-2.3ubuntu1 debconf_1.5.60ubuntu1 debhelper_10.4ubuntu3 debianutils_4.8.1.1 dh-autoreconf_14 dh-strip-nondeterminism_0.034-1 diffutils_1:3.5-3 dmsetup_2:1.02.137-2ubuntu2 dpkg_1.18.24ubuntu1 dpkg-dev_1.18.24ubuntu1 e2fslibs_1.43.4-2 e2fsprogs_1.43.4-2 fakeroot_1.21-1ubuntu2 file_1:5.30-1 findutils_4.6.0+git+20161106-2 fontconfig-config_2.11.94-0ubuntu2 fonts-dejavu-core_2.37-1 g++_4:6.3.0-2ubuntu1 g++-6_6.3.0-18ubuntu2 gcc_4:6.3.0-2ubuntu1 gcc-6_6.3.0-18ubuntu2 gcc-6-base_6.3.0-18ubuntu2 gcc-7-base_7.1.0-6ubuntu2 gettext_0.19.8.1-2ubuntu1 gettext-base_0.19.8.1-2ubuntu1 gnupg_2.1.15-1ubuntu7 gnupg-agent_2.1.15-1ubuntu7 gpgv_2.1.15-1ubuntu7 grep_2.27-2 groff-base_1.22.3-9 gzip_1.6-5ubuntu1 help2man_1.47.4 hostname_3.18 init_1.48 init-system-helpers_1.48 initscripts_2.88dsf-59.3ubuntu2 insserv_1.14.0-5ubuntu3 intltool-debian_0.35.0+20060710.4 libacl1_2.2.52-3build1 libapparmor1_2.11.0-2ubuntu8 libapt-pkg5.0_1.4.6 libarchive-zip-perl_1.59-1 libasan3_6.3.0-18ubuntu2 libasn1-8-heimdal_7.1.0+dfsg-13 libassuan0_2.4.3-2 libatomic1_7.1.0-6ubuntu2 libattr1_1:2.4.47-2build1 libaudit-common_1:2.6.6-1ubuntu2 libaudit1_1:2.6.6-1ubuntu2 libblkid1_2.29-1ubuntu3 libbsd0_0.8.3-1 libbz2-1.0_1.0.6-8.1 libc-bin_2.24-9ubuntu2 libc-dev-bin_2.24-9ubuntu2 libc6_2.24-9ubuntu2 libc6-dev_2.24-9ubuntu2 libcap-ng0_0.7.7-3 libcap2_1:2.25-1 libcc1-0_7.1.0-6ubuntu2 libcilkrts5_7.1.0-6ubuntu2 libcomerr2_1.43.4-2 libcroco3_0.6.11-3 libcryptsetup4_2:1.7.2-0ubuntu1 libcurl3-gnutls_7.52.1-5ubuntu1 libdb5.3_5.3.28-12 libdebconfclient0_0.213ubuntu1 libdevmapper1.02.1_2:1.02.137-2ubuntu2 libdpkg-perl_1.18.24ubuntu1 libexpat1_2.2.0-2 libfakeroot_1.21-1ubuntu2 libfdisk1_2.29-1ubuntu3 libffi6_3.2.1-6 libfile-stripnondeterminism-perl_0.034-1 libfontconfig1_2.11.94-0ubuntu2 libfreetype6_2.6.3-3.2ubuntu1 libgcc-6-dev_6.3.0-18ubuntu2 libgcc1_1:7.1.0-6ubuntu2 libgcrypt20_1.7.6-2 libgd-graph-perl_1.48-2 libgd-perl_2.53-3build1 libgd-text-perl_0.86-9 libgd3_2.2.4-2 libgdbm3_1.8.3-14 libglib2.0-0_2.53.1-1 libgmp10_2:6.1.2+dfsg-1 libgnutls30_3.5.8-5ubuntu1 libgomp1_7.1.0-6ubuntu2 libgpg-error0_1.26-2 libgssapi-krb5-2_1.15-2 libgssapi3-heimdal_7.1.0+dfsg-13 libgtextutils-dev_0.7-4 libgtextutils0v5_0.7-4 libhcrypto4-heimdal_7.1.0+dfsg-13 libheimbase1-heimdal_7.1.0+dfsg-13 libheimntlm0-heimdal_7.1.0+dfsg-13 libhogweed4_3.3-1 libhx509-5-heimdal_7.1.0+dfsg-13 libicu57_57.1-6 libidn11_1.33-1 libidn2-0_0.16-1 libip4tc0_1.6.0-3ubuntu2 libisl15_0.18-1 libitm1_7.1.0-6ubuntu2 libjbig0_2.1-3.1 libjpeg-turbo8_1.5.1-0ubuntu1 libjpeg8_8c-2ubuntu8 libk5crypto3_1.15-2 libkeyutils1_1.5.9-9ubuntu1 libkmod2_24-1ubuntu1 libkrb5-26-heimdal_7.1.0+dfsg-13 libkrb5-3_1.15-2 libkrb5support0_1.15-2 libksba8_1.3.5-2 libldap-2.4-2_2.4.44+dfsg-5ubuntu1 libldap-common_2.4.44+dfsg-5ubuntu1 liblocale-gettext-perl_1.07-3build1 liblockfile-bin_1.14-1 liblockfile1_1.14-1 liblz4-1_0.0~r131-2ubuntu2 liblzma5_5.2.2-1.2 libmagic-mgc_1:5.30-1 libmagic1_1:5.30-1 libmount1_2.29-1ubuntu3 libmpc3_1.0.3-1 libmpfr4_3.1.5-1 libmpx2_7.1.0-6ubuntu2 libncurses5_6.0+20160625-1ubuntu1 libncursesw5_6.0+20160625-1ubuntu1 libnettle6_3.3-1 libnpth0_1.3-1 libp11-kit0_0.23.3-5 libpam-modules_1.1.8-3.2ubuntu3 libpam-modules-bin_1.1.8-3.2ubuntu3 libpam-runtime_1.1.8-3.2ubuntu3 libpam0g_1.1.8-3.2ubuntu3 libpcre3_2:8.39-3 libperl5.24_5.24.1-3ubuntu1 libperlio-gzip-perl_0.19-1build2 libpipeline1_1.4.1-2 libpng16-16_1.6.29-2 libprocps6_2:3.3.12-1ubuntu2 libpsl5_0.17.0-4 libquadmath0_7.1.0-6ubuntu2 libreadline7_7.0-0ubuntu2 libroken18-heimdal_7.1.0+dfsg-13 librtmp1_2.4+20151223.gitfa8646d.1-1 libsasl2-2_2.1.27~101-g0780600+dfsg-2ubuntu1 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-2ubuntu1 libseccomp2_2.3.1-2.1ubuntu1 libselinux1_2.6-3build1 libsemanage-common_2.6-2build1 libsemanage1_2.6-2build1 libsepol1_2.6-2 libsigsegv2_2.10-5 libslang2_2.3.1-5ubuntu1 libsmartcols1_2.29-1ubuntu3 libsqlite3-0_3.16.2-4 libss2_1.43.4-2 libssl1.0.0_1.0.2g-1ubuntu13 libstdc++-6-dev_6.3.0-18ubuntu2 libstdc++6_7.1.0-6ubuntu2 libsystemd0_233-6ubuntu3 libtasn1-6_4.10-1.1 libtiff5_4.0.8-2 libtimedate-perl_2.3000-2 libtinfo5_6.0+20160625-1ubuntu1 libtool_2.4.6-2 libubsan0_7.1.0-6ubuntu2 libudev1_233-6ubuntu3 libunistring0_0.9.3-5.2ubuntu1 libusb-0.1-4_2:0.1.12-31 libustr-1.0-1_1.0.4-6 libuuid1_2.29-1ubuntu3 libwebp6_0.5.2-1 libwind0-heimdal_7.1.0+dfsg-13 libx11-6_2:1.6.4-3 libx11-data_2:1.6.4-3 libxau6_1:1.0.8-1 libxcb1_1.11.1-1ubuntu1 libxdmcp6_1:1.1.2-3 libxml2_2.9.4+dfsg1-2.2ubuntu1 libxpm4_1:3.5.12-1 linux-libc-dev_4.11.0-5.10 lockfile-progs_0.1.17build1 login_1:4.2-3.2ubuntu2 lsb-base_9.20160110ubuntu5 m4_1.4.18-1 make_4.1-9.1 man-db_2.7.6.1-2 mawk_1.3.3-17ubuntu2 mount_2.29-1ubuntu3 multiarch-support_2.24-9ubuntu2 ncurses-base_6.0+20160625-1ubuntu1 ncurses-bin_6.0+20160625-1ubuntu1 openssl_1.0.2g-1ubuntu13 optipng_0.7.6-1build1 passwd_1:4.2-3.2ubuntu2 patch_2.7.5-1build1 perl_5.24.1-3ubuntu1 perl-base_5.24.1-3ubuntu1 perl-modules-5.24_5.24.1-3ubuntu1 pinentry-curses_1.0.0-2 pkg-config_0.29.1-0ubuntu2 pkgbinarymangler_131 po-debconf_1.0.20 policyrcd-script-zg2_0.1-3 procps_2:3.3.12-1ubuntu2 readline-common_7.0-0ubuntu2 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-fastx-toolkit-dummy_0.invalid.0 sed_4.4-1 sensible-utils_0.0.9 systemd_233-6ubuntu3 systemd-sysv_233-6ubuntu3 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.88dsf-59.8git1 tar_1.29b-1.1 tzdata_2017b-1 ubuntu-keyring_2016.10.27 ucf_3.0036 util-linux_2.29-1ubuntu3 xz-utils_5.2.2-1.2 zlib1g_1:1.2.11.dfsg-0ubuntu1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Wed Jun 7 06:13:34 2017 UTC gpgv: using RSA key gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./fastx-toolkit_0.0.14-4.dsc dpkg-source: info: extracting fastx-toolkit in fastx-toolkit-0.0.14 dpkg-source: info: unpacking fastx-toolkit_0.0.14.orig.tar.gz dpkg-source: info: unpacking fastx-toolkit_0.0.14-4.debian.tar.xz dpkg-source: info: applying Q_option_documentation.patch dpkg-source: info: applying reproducible_build.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/home/buildd LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd MAIL=/var/mail/buildd OLDPWD=/ PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games PWD=/<> SHELL=/bin/sh SUDO_COMMAND=/usr/sbin/chroot /<> su buildd -s /bin/sh -c cd '/<>' && 'env' SUDO_GID=2501 SUDO_UID=2001 SUDO_USER=buildd TERM=unknown USER=buildd USERNAME=root dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package fastx-toolkit dpkg-buildpackage: info: source version 0.0.14-4 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build fastx-toolkit-0.0.14 dpkg-buildpackage: info: host architecture i386 fakeroot debian/rules clean dh clean --with autotools_dev dh_testdir dh_auto_clean dh_autoreconf_clean dh_autotools-dev_restoreconfig for c_g in `find . -type f -name config.guess` ; do if test -e "$c_g.dh-orig" ; then mv -f "$c_g.dh-orig" "$c_g" ; fi ; done for c_s in `find . -type f -name config.sub` ; do if test -e "$c_s.dh-orig" ; then mv -f "$c_s.dh-orig" "$c_s" ; fi ; done find . -type f \( -name config.guess.dh-orig -o -name config.sub.dh-orig \) -delete dh_clean rm -f debian/debhelper-build-stamp rm -f debian/fastx-toolkit.substvars rm -f debian/fastx-toolkit.*.debhelper rm -rf debian/fastx-toolkit/ rm -rf debian/.debhelper/ rm -f debian/*.debhelper.log rm -f debian/files find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) rm -f *-stamp debian/rules build-arch dh build-arch --with autotools_dev dh_testdir -a dh_update_autotools_config -a dh_autoreconf -a find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + > debian/autoreconf.before autoreconf -f -i libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'config'. libtoolize: copying file 'config/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:20: installing 'config/compile' configure.ac:22: installing 'config/config.guess' configure.ac:22: installing 'config/config.sub' configure.ac:18: installing 'config/install-sh' configure.ac:18: installing 'config/missing' Makefile.am: installing './INSTALL' src/fasta_formatter/Makefile.am: installing 'config/depcomp' find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + > debian/autoreconf.after dh_autotools-dev_updateconfig -a for c_g in `find -type f -name config.guess` ; do if ! test -e "$c_g.dh-orig" ; then mv -f "$c_g" "$c_g.dh-orig" ; cp -f /usr/share/misc/config.guess "$c_g" ; fi ; done for c_s in `find -type f -name config.sub` ; do if ! test -e "$c_s.dh-orig" ; then mv -f "$c_s" "$c_s.dh-orig" ; cp -f /usr/share/misc/config.sub "$c_s" ; fi ; done rm -f debian/*.debhelper.log debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' ./reconf - libtoolize. - aclocal. - autoconf. - autoheader. - automake. dh_auto_configure ./configure --build=i686-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/i386-linux-gnu --libexecdir=\${prefix}/lib/i386-linux-gnu --disable-maintainer-mode --disable-dependency-tracking configure: WARNING: unrecognized options: --disable-maintainer-mode checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking for style of include used by make... GNU checking dependency style of gcc... none checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... none checking build system type... i686-pc-linux-gnu checking host system type... i686-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert i686-pc-linux-gnu file names to i686-pc-linux-gnu format... func_convert_file_noop checking how to convert i686-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for long long int... yes checking for ISO C++ TR1 include files... yes checking whether g++ supports C++11 features by default... yes checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for GTEXTUTILS... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating doc/Makefile config.status: creating m4/Makefile config.status: creating src/Makefile config.status: creating src/libfastx/Makefile config.status: creating src/fastx_clipper/Makefile config.status: creating src/fastq_to_fasta/Makefile config.status: creating src/fastx_quality_stats/Makefile config.status: creating src/fastq_quality_converter/Makefile config.status: creating src/fastx_trimmer/Makefile config.status: creating src/fastq_quality_filter/Makefile config.status: creating src/fastq_quality_trimmer/Makefile config.status: creating src/fastx_artifacts_filter/Makefile config.status: creating src/fastx_reverse_complement/Makefile config.status: creating src/fastx_collapser/Makefile config.status: creating src/fastx_uncollapser/Makefile config.status: creating src/seqalign_test/Makefile config.status: creating src/fasta_formatter/Makefile config.status: creating src/fasta_nucleotide_changer/Makefile config.status: creating src/fastx_renamer/Makefile config.status: creating src/fastq_masker/Makefile config.status: creating galaxy/Makefile config.status: creating galaxy/tools/Makefile config.status: creating galaxy/tools/fastx_toolkit/Makefile config.status: creating galaxy/test-data/Makefile config.status: creating galaxy/static/Makefile config.status: creating galaxy/static/fastx_icons/Makefile config.status: creating galaxy/tool-data/Makefile config.status: creating scripts/Makefile config.status: creating build_scripts/Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands configure: WARNING: unrecognized options: --disable-maintainer-mode make[1]: Leaving directory '/<>' dh_auto_build -a make -j4 make[1]: Entering directory '/<>' make all-recursive make[2]: Entering directory '/<>' Making all in m4 make[3]: Entering directory '/<>/m4' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/m4' Making all in src make[3]: Entering directory '/<>/src' Making all in libfastx make[4]: Entering directory '/<>/src/libfastx' gcc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -c -o chomp.o chomp.c gcc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -c -o fastx.o fastx.c gcc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -c -o fastx_args.o fastx_args.c g++ -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -c -o sequence_alignment.o sequence_alignment.cpp rm -f libfastx.a ar cru libfastx.a chomp.o fastx.o fastx_args.o sequence_alignment.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libfastx.a make[4]: Leaving directory '/<>/src/libfastx' Making all in fastx_clipper make[4]: Entering directory '/<>/src/fastx_clipper' g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/libfastx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -c -o fastx_clipper.o fastx_clipper.cpp /bin/bash ../../libtool --tag=CXX --mode=link g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -o fastx_clipper fastx_clipper.o ../libfastx/libfastx.a libtool: link: g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o fastx_clipper fastx_clipper.o ../libfastx/libfastx.a make[4]: Leaving directory '/<>/src/fastx_clipper' Making all in fastx_trimmer make[4]: Entering directory '/<>/src/fastx_trimmer' gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libfastx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -c -o fastx_trimmer.o fastx_trimmer.c /bin/bash ../../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -o fastx_trimmer fastx_trimmer.o ../libfastx/libfastx.a libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o fastx_trimmer fastx_trimmer.o ../libfastx/libfastx.a make[4]: Leaving directory '/<>/src/fastx_trimmer' Making all in fastx_quality_stats make[4]: Entering directory '/<>/src/fastx_quality_stats' gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libfastx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -c -o fastx_quality_stats.o fastx_quality_stats.c /bin/bash ../../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -o fastx_quality_stats fastx_quality_stats.o ../libfastx/libfastx.a libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o fastx_quality_stats fastx_quality_stats.o ../libfastx/libfastx.a make[4]: Leaving directory '/<>/src/fastx_quality_stats' Making all in fastq_quality_converter make[4]: Entering directory '/<>/src/fastq_quality_converter' gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libfastx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -c -o fastq_quality_converter.o fastq_quality_converter.c /bin/bash ../../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -o fastq_quality_converter fastq_quality_converter.o ../libfastx/libfastx.a libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o fastq_quality_converter fastq_quality_converter.o ../libfastx/libfastx.a make[4]: Leaving directory '/<>/src/fastq_quality_converter' Making all in fastq_to_fasta make[4]: Entering directory '/<>/src/fastq_to_fasta' gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libfastx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -c -o fastq_to_fasta.o fastq_to_fasta.c /bin/bash ../../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -o fastq_to_fasta fastq_to_fasta.o ../libfastx/libfastx.a libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o fastq_to_fasta fastq_to_fasta.o ../libfastx/libfastx.a make[4]: Leaving directory '/<>/src/fastq_to_fasta' Making all in fastq_quality_filter make[4]: Entering directory '/<>/src/fastq_quality_filter' gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libfastx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -c -o fastq_quality_filter.o fastq_quality_filter.c /bin/bash ../../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -o fastq_quality_filter fastq_quality_filter.o ../libfastx/libfastx.a libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o fastq_quality_filter fastq_quality_filter.o ../libfastx/libfastx.a make[4]: Leaving directory '/<>/src/fastq_quality_filter' Making all in fastq_quality_trimmer make[4]: Entering directory '/<>/src/fastq_quality_trimmer' gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libfastx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -c -o fastq_quality_trimmer.o fastq_quality_trimmer.c /bin/bash ../../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -o fastq_quality_trimmer fastq_quality_trimmer.o ../libfastx/libfastx.a libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o fastq_quality_trimmer fastq_quality_trimmer.o ../libfastx/libfastx.a make[4]: Leaving directory '/<>/src/fastq_quality_trimmer' Making all in fastx_artifacts_filter make[4]: Entering directory '/<>/src/fastx_artifacts_filter' gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libfastx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -c -o fastx_artifacts_filter.o fastx_artifacts_filter.c /bin/bash ../../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -o fastx_artifacts_filter fastx_artifacts_filter.o ../libfastx/libfastx.a libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o fastx_artifacts_filter fastx_artifacts_filter.o ../libfastx/libfastx.a make[4]: Leaving directory '/<>/src/fastx_artifacts_filter' Making all in fastx_reverse_complement make[4]: Entering directory '/<>/src/fastx_reverse_complement' gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libfastx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -c -o fastx_reverse_complement.o fastx_reverse_complement.c /bin/bash ../../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -o fastx_reverse_complement fastx_reverse_complement.o ../libfastx/libfastx.a libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o fastx_reverse_complement fastx_reverse_complement.o ../libfastx/libfastx.a make[4]: Leaving directory '/<>/src/fastx_reverse_complement' Making all in fastx_collapser make[4]: Entering directory '/<>/src/fastx_collapser' g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/libfastx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -c -o fastx_collapser.o fastx_collapser.cpp /bin/bash ../../libtool --tag=CXX --mode=link g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -o fastx_collapser fastx_collapser.o ../libfastx/libfastx.a libtool: link: g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o fastx_collapser fastx_collapser.o ../libfastx/libfastx.a make[4]: Leaving directory '/<>/src/fastx_collapser' Making all in fastx_uncollapser make[4]: Entering directory '/<>/src/fastx_uncollapser' g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include/gtextutils -I../../src/libfastx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -c -o fastx_uncollapser.o fastx_uncollapser.cpp /bin/bash ../../libtool --tag=CXX --mode=link g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -o fastx_uncollapser fastx_uncollapser.o -lgtextutils ../libfastx/libfastx.a libtool: link: g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o fastx_uncollapser fastx_uncollapser.o -lgtextutils ../libfastx/libfastx.a make[4]: Leaving directory '/<>/src/fastx_uncollapser' Making all in seqalign_test make[4]: Entering directory '/<>/src/seqalign_test' g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/libfastx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -c -o seqalign_test.o seqalign_test.cpp /bin/bash ../../libtool --tag=CXX --mode=link g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -o seqalign_test seqalign_test.o ../libfastx/libfastx.a libtool: link: g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o seqalign_test seqalign_test.o ../libfastx/libfastx.a make[4]: Leaving directory '/<>/src/seqalign_test' Making all in fasta_formatter make[4]: Entering directory '/<>/src/fasta_formatter' g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include/gtextutils -I../../src/libfastx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -c -o fasta_formatter.o fasta_formatter.cpp /bin/bash ../../libtool --tag=CXX --mode=link g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -o fasta_formatter fasta_formatter.o -lgtextutils ../libfastx/libfastx.a libtool: link: g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o fasta_formatter fasta_formatter.o -lgtextutils ../libfastx/libfastx.a make[4]: Leaving directory '/<>/src/fasta_formatter' Making all in fasta_nucleotide_changer make[4]: Entering directory '/<>/src/fasta_nucleotide_changer' gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libfastx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -c -o fasta_nucleotide_changer.o fasta_nucleotide_changer.c /bin/bash ../../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -o fasta_nucleotide_changer fasta_nucleotide_changer.o ../libfastx/libfastx.a libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o fasta_nucleotide_changer fasta_nucleotide_changer.o ../libfastx/libfastx.a make[4]: Leaving directory '/<>/src/fasta_nucleotide_changer' Making all in fastx_renamer make[4]: Entering directory '/<>/src/fastx_renamer' gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libfastx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -c -o fastx_renamer.o fastx_renamer.c /bin/bash ../../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -o fastx_renamer fastx_renamer.o ../libfastx/libfastx.a libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o fastx_renamer fastx_renamer.o ../libfastx/libfastx.a make[4]: Leaving directory '/<>/src/fastx_renamer' Making all in fastq_masker make[4]: Entering directory '/<>/src/fastq_masker' gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libfastx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -c -o fastq_masker.o fastq_masker.c /bin/bash ../../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -o fastq_masker fastq_masker.o ../libfastx/libfastx.a libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror -DDEBUG -g -O1 -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o fastq_masker fastq_masker.o ../libfastx/libfastx.a make[4]: Leaving directory '/<>/src/fastq_masker' make[4]: Entering directory '/<>/src' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' Making all in doc make[3]: Entering directory '/<>/doc' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/doc' Making all in galaxy make[3]: Entering directory '/<>/galaxy' Making all in tools make[4]: Entering directory '/<>/galaxy/tools' Making all in fastx_toolkit make[5]: Entering directory '/<>/galaxy/tools/fastx_toolkit' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/<>/galaxy/tools/fastx_toolkit' make[5]: Entering directory '/<>/galaxy/tools' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/<>/galaxy/tools' make[4]: Leaving directory '/<>/galaxy/tools' Making all in test-data make[4]: Entering directory '/<>/galaxy/test-data' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/galaxy/test-data' Making all in static make[4]: Entering directory '/<>/galaxy/static' Making all in fastx_icons make[5]: Entering directory '/<>/galaxy/static/fastx_icons' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/<>/galaxy/static/fastx_icons' make[5]: Entering directory '/<>/galaxy/static' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/<>/galaxy/static' make[4]: Leaving directory '/<>/galaxy/static' Making all in tool-data make[4]: Entering directory '/<>/galaxy/tool-data' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/galaxy/tool-data' make[4]: Entering directory '/<>/galaxy' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/<>/galaxy' make[3]: Leaving directory '/<>/galaxy' Making all in scripts make[3]: Entering directory '/<>/scripts' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/scripts' Making all in build_scripts make[3]: Entering directory '/<>/build_scripts' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/build_scripts' make[3]: Entering directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_auto_test -a make -j4 check VERBOSE=1 make[1]: Entering directory '/<>' Making check in m4 make[2]: Entering directory '/<>/m4' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/<>/m4' Making check in src make[2]: Entering directory '/<>/src' Making check in libfastx make[3]: Entering directory '/<>/src/libfastx' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/<>/src/libfastx' Making check in fastx_clipper make[3]: Entering directory '/<>/src/fastx_clipper' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/<>/src/fastx_clipper' Making check in fastx_trimmer make[3]: Entering directory '/<>/src/fastx_trimmer' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/<>/src/fastx_trimmer' Making check in fastx_quality_stats make[3]: Entering directory '/<>/src/fastx_quality_stats' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/<>/src/fastx_quality_stats' Making check in fastq_quality_converter make[3]: Entering directory '/<>/src/fastq_quality_converter' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/<>/src/fastq_quality_converter' Making check in fastq_to_fasta make[3]: Entering directory '/<>/src/fastq_to_fasta' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/<>/src/fastq_to_fasta' Making check in fastq_quality_filter make[3]: Entering directory '/<>/src/fastq_quality_filter' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/<>/src/fastq_quality_filter' Making check in fastq_quality_trimmer make[3]: Entering directory '/<>/src/fastq_quality_trimmer' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/<>/src/fastq_quality_trimmer' Making check in fastx_artifacts_filter make[3]: Entering directory '/<>/src/fastx_artifacts_filter' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/<>/src/fastx_artifacts_filter' Making check in fastx_reverse_complement make[3]: Entering directory '/<>/src/fastx_reverse_complement' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/<>/src/fastx_reverse_complement' Making check in fastx_collapser make[3]: Entering directory '/<>/src/fastx_collapser' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/<>/src/fastx_collapser' Making check in fastx_uncollapser make[3]: Entering directory '/<>/src/fastx_uncollapser' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/<>/src/fastx_uncollapser' Making check in seqalign_test make[3]: Entering directory '/<>/src/seqalign_test' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/<>/src/seqalign_test' Making check in fasta_formatter make[3]: Entering directory '/<>/src/fasta_formatter' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/<>/src/fasta_formatter' Making check in fasta_nucleotide_changer make[3]: Entering directory '/<>/src/fasta_nucleotide_changer' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/<>/src/fasta_nucleotide_changer' Making check in fastx_renamer make[3]: Entering directory '/<>/src/fastx_renamer' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/<>/src/fastx_renamer' Making check in fastq_masker make[3]: Entering directory '/<>/src/fastq_masker' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/<>/src/fastq_masker' make[3]: Entering directory '/<>/src' make[3]: Nothing to be done for 'check-am'. make[3]: Leaving directory '/<>/src' make[2]: Leaving directory '/<>/src' Making check in doc make[2]: Entering directory '/<>/doc' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/<>/doc' Making check in galaxy make[2]: Entering directory '/<>/galaxy' Making check in tools make[3]: Entering directory '/<>/galaxy/tools' Making check in fastx_toolkit make[4]: Entering directory '/<>/galaxy/tools/fastx_toolkit' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/<>/galaxy/tools/fastx_toolkit' make[4]: Entering directory '/<>/galaxy/tools' make[4]: Nothing to be done for 'check-am'. make[4]: Leaving directory '/<>/galaxy/tools' make[3]: Leaving directory '/<>/galaxy/tools' Making check in test-data make[3]: Entering directory '/<>/galaxy/test-data' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/<>/galaxy/test-data' Making check in static make[3]: Entering directory '/<>/galaxy/static' Making check in fastx_icons make[4]: Entering directory '/<>/galaxy/static/fastx_icons' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/<>/galaxy/static/fastx_icons' make[4]: Entering directory '/<>/galaxy/static' make[4]: Nothing to be done for 'check-am'. make[4]: Leaving directory '/<>/galaxy/static' make[3]: Leaving directory '/<>/galaxy/static' Making check in tool-data make[3]: Entering directory '/<>/galaxy/tool-data' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/<>/galaxy/tool-data' make[3]: Entering directory '/<>/galaxy' make[3]: Nothing to be done for 'check-am'. make[3]: Leaving directory '/<>/galaxy' make[2]: Leaving directory '/<>/galaxy' Making check in scripts make[2]: Entering directory '/<>/scripts' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/<>/scripts' Making check in build_scripts make[2]: Entering directory '/<>/build_scripts' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/<>/build_scripts' make[2]: Entering directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch --with autotools_dev dh_testroot -a dh_prep -a rm -f debian/fastx-toolkit.substvars rm -f debian/fastx-toolkit.*.debhelper rm -rf debian/.debhelper/generated/fastx-toolkit/ rm -rf debian/fastx-toolkit/ dh_auto_install -a install -d debian/fastx-toolkit make -j1 install DESTDIR=/<>/debian/fastx-toolkit AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' Making install in m4 make[2]: Entering directory '/<>/m4' make[3]: Entering directory '/<>/m4' make[3]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/debian/fastx-toolkit/usr/share/aclocal' /usr/bin/install -c -m 644 ax_c_long_long.m4 ax_cxx_compile_stdcxx_11.m4 ax_cxx_header_stdcxx_tr1.m4 '/<>/debian/fastx-toolkit/usr/share/aclocal' make[3]: Leaving directory '/<>/m4' make[2]: Leaving directory '/<>/m4' Making install in src make[2]: Entering directory '/<>/src' Making install in libfastx make[3]: Entering directory '/<>/src/libfastx' make[4]: Entering directory '/<>/src/libfastx' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/src/libfastx' make[3]: Leaving directory '/<>/src/libfastx' Making install in fastx_clipper make[3]: Entering directory '/<>/src/fastx_clipper' make[4]: Entering directory '/<>/src/fastx_clipper' /bin/mkdir -p '/<>/debian/fastx-toolkit/usr/bin' /bin/bash ../../libtool --mode=install /usr/bin/install -c fastx_clipper '/<>/debian/fastx-toolkit/usr/bin' libtool: install: /usr/bin/install -c fastx_clipper /<>/debian/fastx-toolkit/usr/bin/fastx_clipper make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/src/fastx_clipper' make[3]: Leaving directory '/<>/src/fastx_clipper' Making install in fastx_trimmer make[3]: Entering directory '/<>/src/fastx_trimmer' make[4]: Entering directory '/<>/src/fastx_trimmer' /bin/mkdir -p '/<>/debian/fastx-toolkit/usr/bin' /bin/bash ../../libtool --mode=install /usr/bin/install -c fastx_trimmer '/<>/debian/fastx-toolkit/usr/bin' libtool: install: /usr/bin/install -c fastx_trimmer /<>/debian/fastx-toolkit/usr/bin/fastx_trimmer make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/src/fastx_trimmer' make[3]: Leaving directory '/<>/src/fastx_trimmer' Making install in fastx_quality_stats make[3]: Entering directory '/<>/src/fastx_quality_stats' make[4]: Entering directory '/<>/src/fastx_quality_stats' /bin/mkdir -p '/<>/debian/fastx-toolkit/usr/bin' /bin/bash ../../libtool --mode=install /usr/bin/install -c fastx_quality_stats '/<>/debian/fastx-toolkit/usr/bin' libtool: install: /usr/bin/install -c fastx_quality_stats /<>/debian/fastx-toolkit/usr/bin/fastx_quality_stats make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/src/fastx_quality_stats' make[3]: Leaving directory '/<>/src/fastx_quality_stats' Making install in fastq_quality_converter make[3]: Entering directory '/<>/src/fastq_quality_converter' make[4]: Entering directory '/<>/src/fastq_quality_converter' /bin/mkdir -p '/<>/debian/fastx-toolkit/usr/bin' /bin/bash ../../libtool --mode=install /usr/bin/install -c fastq_quality_converter '/<>/debian/fastx-toolkit/usr/bin' libtool: install: /usr/bin/install -c fastq_quality_converter /<>/debian/fastx-toolkit/usr/bin/fastq_quality_converter make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/src/fastq_quality_converter' make[3]: Leaving directory '/<>/src/fastq_quality_converter' Making install in fastq_to_fasta make[3]: Entering directory '/<>/src/fastq_to_fasta' make[4]: Entering directory '/<>/src/fastq_to_fasta' /bin/mkdir -p '/<>/debian/fastx-toolkit/usr/bin' /bin/bash ../../libtool --mode=install /usr/bin/install -c fastq_to_fasta '/<>/debian/fastx-toolkit/usr/bin' libtool: install: /usr/bin/install -c fastq_to_fasta /<>/debian/fastx-toolkit/usr/bin/fastq_to_fasta make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/src/fastq_to_fasta' make[3]: Leaving directory '/<>/src/fastq_to_fasta' Making install in fastq_quality_filter make[3]: Entering directory '/<>/src/fastq_quality_filter' make[4]: Entering directory '/<>/src/fastq_quality_filter' /bin/mkdir -p '/<>/debian/fastx-toolkit/usr/bin' /bin/bash ../../libtool --mode=install /usr/bin/install -c fastq_quality_filter '/<>/debian/fastx-toolkit/usr/bin' libtool: install: /usr/bin/install -c fastq_quality_filter /<>/debian/fastx-toolkit/usr/bin/fastq_quality_filter make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/src/fastq_quality_filter' make[3]: Leaving directory '/<>/src/fastq_quality_filter' Making install in fastq_quality_trimmer make[3]: Entering directory '/<>/src/fastq_quality_trimmer' make[4]: Entering directory '/<>/src/fastq_quality_trimmer' /bin/mkdir -p '/<>/debian/fastx-toolkit/usr/bin' /bin/bash ../../libtool --mode=install /usr/bin/install -c fastq_quality_trimmer '/<>/debian/fastx-toolkit/usr/bin' libtool: install: /usr/bin/install -c fastq_quality_trimmer /<>/debian/fastx-toolkit/usr/bin/fastq_quality_trimmer make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/src/fastq_quality_trimmer' make[3]: Leaving directory '/<>/src/fastq_quality_trimmer' Making install in fastx_artifacts_filter make[3]: Entering directory '/<>/src/fastx_artifacts_filter' make[4]: Entering directory '/<>/src/fastx_artifacts_filter' /bin/mkdir -p '/<>/debian/fastx-toolkit/usr/bin' /bin/bash ../../libtool --mode=install /usr/bin/install -c fastx_artifacts_filter '/<>/debian/fastx-toolkit/usr/bin' libtool: install: /usr/bin/install -c fastx_artifacts_filter /<>/debian/fastx-toolkit/usr/bin/fastx_artifacts_filter make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/src/fastx_artifacts_filter' make[3]: Leaving directory '/<>/src/fastx_artifacts_filter' Making install in fastx_reverse_complement make[3]: Entering directory '/<>/src/fastx_reverse_complement' make[4]: Entering directory '/<>/src/fastx_reverse_complement' /bin/mkdir -p '/<>/debian/fastx-toolkit/usr/bin' /bin/bash ../../libtool --mode=install /usr/bin/install -c fastx_reverse_complement '/<>/debian/fastx-toolkit/usr/bin' libtool: install: /usr/bin/install -c fastx_reverse_complement /<>/debian/fastx-toolkit/usr/bin/fastx_reverse_complement make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/src/fastx_reverse_complement' make[3]: Leaving directory '/<>/src/fastx_reverse_complement' Making install in fastx_collapser make[3]: Entering directory '/<>/src/fastx_collapser' make[4]: Entering directory '/<>/src/fastx_collapser' /bin/mkdir -p '/<>/debian/fastx-toolkit/usr/bin' /bin/bash ../../libtool --mode=install /usr/bin/install -c fastx_collapser '/<>/debian/fastx-toolkit/usr/bin' libtool: install: /usr/bin/install -c fastx_collapser /<>/debian/fastx-toolkit/usr/bin/fastx_collapser make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/src/fastx_collapser' make[3]: Leaving directory '/<>/src/fastx_collapser' Making install in fastx_uncollapser make[3]: Entering directory '/<>/src/fastx_uncollapser' make[4]: Entering directory '/<>/src/fastx_uncollapser' /bin/mkdir -p '/<>/debian/fastx-toolkit/usr/bin' /bin/bash ../../libtool --mode=install /usr/bin/install -c fastx_uncollapser '/<>/debian/fastx-toolkit/usr/bin' libtool: install: /usr/bin/install -c fastx_uncollapser /<>/debian/fastx-toolkit/usr/bin/fastx_uncollapser make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/src/fastx_uncollapser' make[3]: Leaving directory '/<>/src/fastx_uncollapser' Making install in seqalign_test make[3]: Entering directory '/<>/src/seqalign_test' make[4]: Entering directory '/<>/src/seqalign_test' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/src/seqalign_test' make[3]: Leaving directory '/<>/src/seqalign_test' Making install in fasta_formatter make[3]: Entering directory '/<>/src/fasta_formatter' make[4]: Entering directory '/<>/src/fasta_formatter' /bin/mkdir -p '/<>/debian/fastx-toolkit/usr/bin' /bin/bash ../../libtool --mode=install /usr/bin/install -c fasta_formatter '/<>/debian/fastx-toolkit/usr/bin' libtool: install: /usr/bin/install -c fasta_formatter /<>/debian/fastx-toolkit/usr/bin/fasta_formatter make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/src/fasta_formatter' make[3]: Leaving directory '/<>/src/fasta_formatter' Making install in fasta_nucleotide_changer make[3]: Entering directory '/<>/src/fasta_nucleotide_changer' make[4]: Entering directory '/<>/src/fasta_nucleotide_changer' /bin/mkdir -p '/<>/debian/fastx-toolkit/usr/bin' /bin/bash ../../libtool --mode=install /usr/bin/install -c fasta_nucleotide_changer '/<>/debian/fastx-toolkit/usr/bin' libtool: install: /usr/bin/install -c fasta_nucleotide_changer /<>/debian/fastx-toolkit/usr/bin/fasta_nucleotide_changer make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/src/fasta_nucleotide_changer' make[3]: Leaving directory '/<>/src/fasta_nucleotide_changer' Making install in fastx_renamer make[3]: Entering directory '/<>/src/fastx_renamer' make[4]: Entering directory '/<>/src/fastx_renamer' /bin/mkdir -p '/<>/debian/fastx-toolkit/usr/bin' /bin/bash ../../libtool --mode=install /usr/bin/install -c fastx_renamer '/<>/debian/fastx-toolkit/usr/bin' libtool: install: /usr/bin/install -c fastx_renamer /<>/debian/fastx-toolkit/usr/bin/fastx_renamer make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/src/fastx_renamer' make[3]: Leaving directory '/<>/src/fastx_renamer' Making install in fastq_masker make[3]: Entering directory '/<>/src/fastq_masker' make[4]: Entering directory '/<>/src/fastq_masker' /bin/mkdir -p '/<>/debian/fastx-toolkit/usr/bin' /bin/bash ../../libtool --mode=install /usr/bin/install -c fastq_masker '/<>/debian/fastx-toolkit/usr/bin' libtool: install: /usr/bin/install -c fastq_masker /<>/debian/fastx-toolkit/usr/bin/fastq_masker make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/src/fastq_masker' make[3]: Leaving directory '/<>/src/fastq_masker' make[3]: Entering directory '/<>/src' make[4]: Entering directory '/<>/src' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' make[2]: Leaving directory '/<>/src' Making install in doc make[2]: Entering directory '/<>/doc' make[3]: Entering directory '/<>/doc' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/doc' make[2]: Leaving directory '/<>/doc' Making install in galaxy make[2]: Entering directory '/<>/galaxy' Making install in tools make[3]: Entering directory '/<>/galaxy/tools' Making install in fastx_toolkit make[4]: Entering directory '/<>/galaxy/tools/fastx_toolkit' make[5]: Entering directory '/<>/galaxy/tools/fastx_toolkit' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/<>/galaxy/tools/fastx_toolkit' make[4]: Leaving directory '/<>/galaxy/tools/fastx_toolkit' make[4]: Entering directory '/<>/galaxy/tools' make[5]: Entering directory '/<>/galaxy/tools' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/<>/galaxy/tools' make[4]: Leaving directory '/<>/galaxy/tools' make[3]: Leaving directory '/<>/galaxy/tools' Making install in test-data make[3]: Entering directory '/<>/galaxy/test-data' make[4]: Entering directory '/<>/galaxy/test-data' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/galaxy/test-data' make[3]: Leaving directory '/<>/galaxy/test-data' Making install in static make[3]: Entering directory '/<>/galaxy/static' Making install in fastx_icons make[4]: Entering directory '/<>/galaxy/static/fastx_icons' make[5]: Entering directory '/<>/galaxy/static/fastx_icons' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/<>/galaxy/static/fastx_icons' make[4]: Leaving directory '/<>/galaxy/static/fastx_icons' make[4]: Entering directory '/<>/galaxy/static' make[5]: Entering directory '/<>/galaxy/static' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/<>/galaxy/static' make[4]: Leaving directory '/<>/galaxy/static' make[3]: Leaving directory '/<>/galaxy/static' Making install in tool-data make[3]: Entering directory '/<>/galaxy/tool-data' make[4]: Entering directory '/<>/galaxy/tool-data' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/galaxy/tool-data' make[3]: Leaving directory '/<>/galaxy/tool-data' make[3]: Entering directory '/<>/galaxy' make[4]: Entering directory '/<>/galaxy' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/galaxy' make[3]: Leaving directory '/<>/galaxy' make[2]: Leaving directory '/<>/galaxy' Making install in scripts make[2]: Entering directory '/<>/scripts' make[3]: Entering directory '/<>/scripts' /bin/mkdir -p '/<>/debian/fastx-toolkit/usr/bin' /usr/bin/install -c fastx_barcode_splitter.pl fastx_nucleotide_distribution_graph.sh fastx_nucleotide_distribution_line_graph.sh fastq_quality_boxplot_graph.sh fasta_clipping_histogram.pl '/<>/debian/fastx-toolkit/usr/bin' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/scripts' make[2]: Leaving directory '/<>/scripts' Making install in build_scripts make[2]: Entering directory '/<>/build_scripts' make[3]: Entering directory '/<>/build_scripts' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/build_scripts' make[2]: Leaving directory '/<>/build_scripts' make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' rm -f debian/*.debhelper.log debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install install -d debian/.debhelper/generated/fastx-toolkit rm --recursive /<>/debian/fastx-toolkit/usr/share/aclocal make[1]: Leaving directory '/<>' dh_installdocs -a install -d debian/fastx-toolkit/usr/share/doc/fastx-toolkit cp --reflink=auto -a NEWS debian/fastx-toolkit/usr/share/doc/fastx-toolkit cp --reflink=auto -a README debian/fastx-toolkit/usr/share/doc/fastx-toolkit cp --reflink=auto -a THANKS debian/fastx-toolkit/usr/share/doc/fastx-toolkit cd 'galaxy/test-data/..' && find 'test-data' \( -type f -or -type l \) -and ! -empty -print0 | LC_ALL=C sort -z | xargs -0 -I {} cp --reflink=auto --parents -dp {} /<>/debian/fastx-toolkit/usr/share/doc/fastx-toolkit cp --reflink=auto -a debian/README.test debian/fastx-toolkit/usr/share/doc/fastx-toolkit cp --reflink=auto -a debian/tests/run-unit-test debian/fastx-toolkit/usr/share/doc/fastx-toolkit chown -R 0:0 debian/fastx-toolkit/usr/share/doc chmod -R go=rX debian/fastx-toolkit/usr/share/doc chmod -R u\+rw debian/fastx-toolkit/usr/share/doc install -p -m0644 debian/README.Debian debian/fastx-toolkit/usr/share/doc/fastx-toolkit/README.Debian install -p -m0644 debian/copyright debian/fastx-toolkit/usr/share/doc/fastx-toolkit/copyright rm -f debian/*.debhelper.log debian/rules override_dh_installchangelogs make[1]: Entering directory '/<>' dh_installchangelogs -k NEWS install -p -m0644 debian/changelog debian/fastx-toolkit/usr/share/doc/fastx-toolkit/changelog.Debian install -p -m0644 debian/NEWS debian/fastx-toolkit/usr/share/doc/fastx-toolkit/NEWS.Debian install -p -m0644 NEWS debian/fastx-toolkit/usr/share/doc/fastx-toolkit/changelog ln -sf changelog debian/fastx-toolkit/usr/share/doc/fastx-toolkit/NEWS make[1]: Leaving directory '/<>' rm -f debian/*.debhelper.log debian/rules override_dh_installman make[1]: Entering directory '/<>' mkdir -p /<>/debian/fastx-toolkit/usr/share/man/man1 # The name strings are obtained from # http://hannonlab.cshl.edu/fastx_toolkit/ (Section "Available Tools") # and # http://hannonlab.cshl.edu/fastx_toolkit/commandline.html help2man --no-info --no-discard-stderr --version-string='0.0.14' --help-option='-h' \ --name='changes the width of sequences line in a FASTA file' \ /<>/debian/fastx-toolkit/usr/bin/fasta_formatter > /<>/debian/fastx-toolkit/usr/share/man/man1/fasta_formatter.1 help2man --no-info --no-discard-stderr --version-string='0.0.14' --help-option='-h' \ --name='Convets FASTA sequences from/to RNA/DNA' \ /<>/debian/fastx-toolkit/usr/bin/fasta_nucleotide_changer > /<>/debian/fastx-toolkit/usr/share/man/man1/fasta_nucleotide_changer.1 help2man --no-info --no-discard-stderr --version-string='0.0.14' --help-option='-h' \ --name="Masks nucleotides with 'N' (or other character) based on quality" \ /<>/debian/fastx-toolkit/usr/bin/fastq_masker > /<>/debian/fastx-toolkit/usr/share/man/man1/fastq_masker.1 # FIXME: The tool `fasta_quality_converter` was NOT described at the URLs above help2man --no-info --no-discard-stderr --version-string='0.0.14' --help-option='-h' \ --name='Converts sequences based on quality' \ /<>/debian/fastx-toolkit/usr/bin/fastq_quality_converter > /<>/debian/fastx-toolkit/usr/share/man/man1/fastq_quality_converter.1 help2man --no-info --no-discard-stderr --version-string='0.0.14' --help-option='-h' \ --name='Filters sequences based on quality' \ /<>/debian/fastx-toolkit/usr/bin/fastq_quality_filter > /<>/debian/fastx-toolkit/usr/share/man/man1/fastq_quality_filter.1 dh_installman debian/fastq_quality_trimmer.1 install -p -m0644 debian/fastq_quality_trimmer.1 debian/fastx-toolkit/usr/share/man/man1/fastq_quality_trimmer.1 man --recode UTF-8 ./fasta_nucleotide_changer\.1 > fasta_nucleotide_changer\.1\.new chmod 0755 -- fasta_nucleotide_changer.1.new chown 0:0 -- fasta_nucleotide_changer.1.new mv -f fasta_nucleotide_changer.1.new fasta_nucleotide_changer.1 man --recode UTF-8 ./fasta_formatter\.1 > fasta_formatter\.1\.new chmod 0755 -- fasta_formatter.1.new chown 0:0 -- fasta_formatter.1.new mv -f fasta_formatter.1.new fasta_formatter.1 man --recode UTF-8 ./fastq_quality_converter\.1 > fastq_quality_converter\.1\.new chmod 0755 -- fastq_quality_converter.1.new chown 0:0 -- fastq_quality_converter.1.new mv -f fastq_quality_converter.1.new fastq_quality_converter.1 man --recode UTF-8 ./fastq_quality_filter\.1 > fastq_quality_filter\.1\.new chmod 0755 -- fastq_quality_filter.1.new chown 0:0 -- fastq_quality_filter.1.new mv -f fastq_quality_filter.1.new fastq_quality_filter.1 man --recode UTF-8 ./fastq_masker\.1 > fastq_masker\.1\.new chmod 0755 -- fastq_masker.1.new chown 0:0 -- fastq_masker.1.new mv -f fastq_masker.1.new fastq_masker.1 man --recode UTF-8 ./fastq_quality_trimmer\.1 > fastq_quality_trimmer\.1\.new chmod 0755 -- fastq_quality_trimmer.1.new chown 0:0 -- fastq_quality_trimmer.1.new mv -f fastq_quality_trimmer.1.new fastq_quality_trimmer.1 help2man --no-info --no-discard-stderr --version-string='0.0.14' --help-option='-h' \ --name='Convert FASTQ files to FASTA files' \ /<>/debian/fastx-toolkit/usr/bin/fastq_to_fasta > /<>/debian/fastx-toolkit/usr/share/man/man1/fastq_to_fasta.1 help2man --no-info --no-discard-stderr --version-string='0.0.14' --help-option='-h' \ --name='FASTQ/A Artifacts Filter' \ /<>/debian/fastx-toolkit/usr/bin/fastx_artifacts_filter > /<>/debian/fastx-toolkit/usr/share/man/man1/fastx_artifacts_filter.1 help2man --no-info --no-discard-stderr --version-string='0.0.14' --help-option='-h' \ --name='FASTA/Q Clipper' \ /<>/debian/fastx-toolkit/usr/bin/fastx_clipper > /<>/debian/fastx-toolkit/usr/share/man/man1/fastx_clipper.1 help2man --no-info --no-discard-stderr --version-string='0.0.14' --help-option='-h' \ --name='FASTA/Q Collapser' \ /<>/debian/fastx-toolkit/usr/bin/fastx_collapser > /<>/debian/fastx-toolkit/usr/share/man/man1/fastx_collapser.1 help2man --no-info --no-discard-stderr --version-string='0.0.14' --help-option='-h' \ --name='FASTX Statistics' \ /<>/debian/fastx-toolkit/usr/bin/fastx_quality_stats > /<>/debian/fastx-toolkit/usr/share/man/man1/fastx_quality_stats.1 help2man --no-info --no-discard-stderr --version-string='0.0.14' --help-option='-h' \ --name='FASTA/Q Renamer' \ /<>/debian/fastx-toolkit/usr/bin/fastx_renamer > /<>/debian/fastx-toolkit/usr/share/man/man1/fastx_renamer.1 help2man --no-info --no-discard-stderr --version-string='0.0.14' --help-option='-h' \ --name='FASTQ/A Reverse Complement' \ /<>/debian/fastx-toolkit/usr/bin/fastx_reverse_complement > /<>/debian/fastx-toolkit/usr/share/man/man1/fastx_reverse_complement.1 help2man --no-info --no-discard-stderr --version-string='0.0.14' --help-option='-h' \ --name='FASTA/Q Trimmer' \ /<>/debian/fastx-toolkit/usr/bin/fastx_trimmer > /<>/debian/fastx-toolkit/usr/share/man/man1/fastx_trimmer.1 help2man --no-info --no-discard-stderr --version-string='0.0.14' --help-option='-h' \ --name='FASTA/Q Uncollapser' \ /<>/debian/fastx-toolkit/usr/bin/fastx_uncollapser > /<>/debian/fastx-toolkit/usr/share/man/man1/fastx_uncollapser.1 # Perl scripts add the full path to usage advise which needs to be removed # The script fasta_clipping_histogram.pl does not feature a '-h' option help2man --no-info --no-discard-stderr --version-string='0.0.14' -h '' \ --name='Create a Linker Clipping Information Histogram' \ /<>/debian/fastx-toolkit/usr/bin/fasta_clipping_histogram.pl | \ sed -e 's?^usage: .*\([^/]\+\.pl\)?usage: \1?' \ > /<>/debian/fastx-toolkit/usr/share/man/man1/fasta_clipping_histogram.pl.1 help2man --no-info --no-discard-stderr --version-string='0.0.14' --help-option='-h' \ --name='FASTX Barcode Splitter' \ /<>/debian/fastx-toolkit/usr/bin/fastx_barcode_splitter.pl | \ sed -e 's?^usage: .*\([^/]\+\.pl\)?usage: \1?' \ > /<>/debian/fastx-toolkit/usr/share/man/man1/fastx_barcode_splitter.pl.1 help2man --no-info --no-discard-stderr --version-string='0.0.14' --help-option='-h' \ --name='Solexa-Quality BoxPlot plotter' \ /<>/debian/fastx-toolkit/usr/bin/fastq_quality_boxplot_graph.sh > /<>/debian/fastx-toolkit/usr/share/man/man1/fastq_quality_boxplot_graph.sh.1 help2man --no-info --no-discard-stderr --version-string='0.0.14' --help-option='-h' \ --name='FASTA/Q Nucleotide Distribution Plotter' \ /<>/debian/fastx-toolkit/usr/bin/fastx_nucleotide_distribution_graph.sh > /<>/debian/fastx-toolkit/usr/share/man/man1/fastx_nucleotide_distribution_graph.sh.1 help2man --no-info --no-discard-stderr --version-string='0.0.14' --help-option='-h' \ --name='FASTA/Q Nucleotide Distribution Plotter' \ /<>/debian/fastx-toolkit/usr/bin/fastx_nucleotide_distribution_line_graph.sh > /<>/debian/fastx-toolkit/usr/share/man/man1/fastx_nucleotide_distribution_line_graph.sh.1 for man in `find /<>/debian/fastx-toolkit/usr/share/man/man1 "*.1"` ; do cat debian/manpages_see_also >> $man ; done find: ‘*.1’: No such file or directory /bin/sh: 1: cannot create /<>/debian/fastx-toolkit/usr/share/man/man1: Is a directory make[1]: Leaving directory '/<>' dh_perl -a (grep -a -s -v perl:Depends debian/fastx-toolkit.substvars; echo perl:Depends=perl:any) > debian/fastx-toolkit.substvars.new mv debian/fastx-toolkit.substvars.new debian/fastx-toolkit.substvars dh_link -a rm -f debian/fastx-toolkit/usr/share/doc/fastx-toolkit/NEWS ln -sf changelog debian/fastx-toolkit/usr/share/doc/fastx-toolkit/NEWS dh_strip_nondeterminism -a dh_compress -a cd debian/fastx-toolkit chmod a-x usr/share/doc/fastx-toolkit/NEWS.Debian usr/share/doc/fastx-toolkit/README usr/share/doc/fastx-toolkit/changelog usr/share/doc/fastx-toolkit/changelog.Debian usr/share/doc/fastx-toolkit/test-data/Makefile usr/share/doc/fastx-toolkit/test-data/Makefile.in usr/share/doc/fastx-toolkit/test-data/fasta_formatter1.fasta usr/share/doc/fastx-toolkit/test-data/fasta_formatter1.out usr/share/doc/fastx-toolkit/test-data/fasta_formatter2.out usr/share/man/man1/fasta_clipping_histogram.pl.1 usr/share/man/man1/fasta_formatter.1 usr/share/man/man1/fasta_nucleotide_changer.1 usr/share/man/man1/fastq_masker.1 usr/share/man/man1/fastq_quality_boxplot_graph.sh.1 usr/share/man/man1/fastq_quality_converter.1 usr/share/man/man1/fastq_quality_filter.1 usr/share/man/man1/fastq_quality_trimmer.1 usr/share/man/man1/fastq_to_fasta.1 usr/share/man/man1/fastx_artifacts_filter.1 usr/share/man/man1/fastx_barcode_splitter.pl.1 usr/share/man/man1/fastx_clipper.1 usr/share/man/man1/fastx_collapser.1 usr/share/man/man1/fastx_nucleotide_distribution_graph.sh.1 usr/share/man/man1/fastx_nucleotide_distribution_line_graph.sh.1 usr/share/man/man1/fastx_quality_stats.1 usr/share/man/man1/fastx_renamer.1 usr/share/man/man1/fastx_reverse_complement.1 usr/share/man/man1/fastx_trimmer.1 usr/share/man/man1/fastx_uncollapser.1 gzip -9nf usr/share/doc/fastx-toolkit/NEWS.Debian usr/share/doc/fastx-toolkit/README usr/share/doc/fastx-toolkit/changelog usr/share/doc/fastx-toolkit/changelog.Debian usr/share/doc/fastx-toolkit/test-data/Makefile usr/share/doc/fastx-toolkit/test-data/Makefile.in usr/share/doc/fastx-toolkit/test-data/fasta_formatter1.fasta usr/share/doc/fastx-toolkit/test-data/fasta_formatter1.out usr/share/doc/fastx-toolkit/test-data/fasta_formatter2.out usr/share/man/man1/fasta_clipping_histogram.pl.1 usr/share/man/man1/fasta_formatter.1 usr/share/man/man1/fasta_nucleotide_changer.1 usr/share/man/man1/fastq_masker.1 usr/share/man/man1/fastq_quality_boxplot_graph.sh.1 usr/share/man/man1/fastq_quality_converter.1 usr/share/man/man1/fastq_quality_filter.1 usr/share/man/man1/fastq_quality_trimmer.1 usr/share/man/man1/fastq_to_fasta.1 usr/share/man/man1/fastx_artifacts_filter.1 usr/share/man/man1/fastx_barcode_splitter.pl.1 usr/share/man/man1/fastx_clipper.1 usr/share/man/man1/fastx_collapser.1 usr/share/man/man1/fastx_nucleotide_distribution_graph.sh.1 usr/share/man/man1/fastx_nucleotide_distribution_line_graph.sh.1 usr/share/man/man1/fastx_quality_stats.1 usr/share/man/man1/fastx_renamer.1 usr/share/man/man1/fastx_reverse_complement.1 usr/share/man/man1/fastx_trimmer.1 usr/share/man/man1/fastx_uncollapser.1 cd '/<>' rm -f debian/fastx-toolkit/usr/share/doc/fastx-toolkit/NEWS ln -sf changelog.gz debian/fastx-toolkit/usr/share/doc/fastx-toolkit/NEWS.gz dh_fixperms -a find debian/fastx-toolkit -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/fastx-toolkit ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/fastx-toolkit/usr/share/doc -type f -a -true -a ! -regex 'debian/fastx-toolkit/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/fastx-toolkit/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/fastx-toolkit/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/fastx-toolkit -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/fastx-toolkit/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x dh_missing -a dh_strip -a install -d debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/e5 objcopy --only-keep-debug --compress-debug-sections debian/fastx-toolkit/usr/bin/fastx_trimmer debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/e5/6f2042e0b72258ac4fc16427dd0596e9bcd10b.debug chmod 0644 -- debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/e5/6f2042e0b72258ac4fc16427dd0596e9bcd10b.debug chown 0:0 -- debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/e5/6f2042e0b72258ac4fc16427dd0596e9bcd10b.debug strip --remove-section=.comment --remove-section=.note debian/fastx-toolkit/usr/bin/fastx_trimmer objcopy --add-gnu-debuglink debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/e5/6f2042e0b72258ac4fc16427dd0596e9bcd10b.debug debian/fastx-toolkit/usr/bin/fastx_trimmer install -d debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/3e objcopy --only-keep-debug --compress-debug-sections debian/fastx-toolkit/usr/bin/fastx_clipper debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/3e/98560dde42113e51b1143c7675221f2bfd38e4.debug chmod 0644 -- debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/3e/98560dde42113e51b1143c7675221f2bfd38e4.debug chown 0:0 -- debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/3e/98560dde42113e51b1143c7675221f2bfd38e4.debug strip --remove-section=.comment --remove-section=.note debian/fastx-toolkit/usr/bin/fastx_clipper objcopy --add-gnu-debuglink debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/3e/98560dde42113e51b1143c7675221f2bfd38e4.debug debian/fastx-toolkit/usr/bin/fastx_clipper install -d debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/b4 objcopy --only-keep-debug --compress-debug-sections debian/fastx-toolkit/usr/bin/fastq_quality_converter debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/b4/340e3afa4157d49cf5a957af634105bb41dc91.debug chmod 0644 -- debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/b4/340e3afa4157d49cf5a957af634105bb41dc91.debug chown 0:0 -- debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/b4/340e3afa4157d49cf5a957af634105bb41dc91.debug strip --remove-section=.comment --remove-section=.note debian/fastx-toolkit/usr/bin/fastq_quality_converter objcopy --add-gnu-debuglink debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/b4/340e3afa4157d49cf5a957af634105bb41dc91.debug debian/fastx-toolkit/usr/bin/fastq_quality_converter install -d debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/65 objcopy --only-keep-debug --compress-debug-sections debian/fastx-toolkit/usr/bin/fastq_to_fasta debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/65/6f50e4cad7b259bdb7c79dbb939f6b3df8f603.debug chmod 0644 -- debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/65/6f50e4cad7b259bdb7c79dbb939f6b3df8f603.debug chown 0:0 -- debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/65/6f50e4cad7b259bdb7c79dbb939f6b3df8f603.debug strip --remove-section=.comment --remove-section=.note debian/fastx-toolkit/usr/bin/fastq_to_fasta objcopy --add-gnu-debuglink debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/65/6f50e4cad7b259bdb7c79dbb939f6b3df8f603.debug debian/fastx-toolkit/usr/bin/fastq_to_fasta install -d debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/ec objcopy --only-keep-debug --compress-debug-sections debian/fastx-toolkit/usr/bin/fastq_quality_filter debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/ec/8f660f8a34a00cd6cc344603353b901f221d87.debug chmod 0644 -- debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/ec/8f660f8a34a00cd6cc344603353b901f221d87.debug chown 0:0 -- debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/ec/8f660f8a34a00cd6cc344603353b901f221d87.debug strip --remove-section=.comment --remove-section=.note debian/fastx-toolkit/usr/bin/fastq_quality_filter objcopy --add-gnu-debuglink debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/ec/8f660f8a34a00cd6cc344603353b901f221d87.debug debian/fastx-toolkit/usr/bin/fastq_quality_filter install -d debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/1a objcopy --only-keep-debug --compress-debug-sections debian/fastx-toolkit/usr/bin/fastx_quality_stats debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/1a/b433433e362967be8e3e731db6b422233a0fe6.debug chmod 0644 -- debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/1a/b433433e362967be8e3e731db6b422233a0fe6.debug chown 0:0 -- debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/1a/b433433e362967be8e3e731db6b422233a0fe6.debug strip --remove-section=.comment --remove-section=.note debian/fastx-toolkit/usr/bin/fastx_quality_stats objcopy --add-gnu-debuglink debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/1a/b433433e362967be8e3e731db6b422233a0fe6.debug debian/fastx-toolkit/usr/bin/fastx_quality_stats install -d debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/0f objcopy --only-keep-debug --compress-debug-sections debian/fastx-toolkit/usr/bin/fastx_reverse_complement debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/0f/fc664edb03be0d6828e11deecc3524d3b7518e.debug chmod 0644 -- debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/0f/fc664edb03be0d6828e11deecc3524d3b7518e.debug chown 0:0 -- debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/0f/fc664edb03be0d6828e11deecc3524d3b7518e.debug strip --remove-section=.comment --remove-section=.note debian/fastx-toolkit/usr/bin/fastx_reverse_complement objcopy --add-gnu-debuglink debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/0f/fc664edb03be0d6828e11deecc3524d3b7518e.debug debian/fastx-toolkit/usr/bin/fastx_reverse_complement install -d debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/50 objcopy --only-keep-debug --compress-debug-sections debian/fastx-toolkit/usr/bin/fasta_nucleotide_changer debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/50/e7bd3db0106049082573d7ddc5cd73e5f22e27.debug chmod 0644 -- debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/50/e7bd3db0106049082573d7ddc5cd73e5f22e27.debug chown 0:0 -- debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/50/e7bd3db0106049082573d7ddc5cd73e5f22e27.debug strip --remove-section=.comment --remove-section=.note debian/fastx-toolkit/usr/bin/fasta_nucleotide_changer objcopy --add-gnu-debuglink debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/50/e7bd3db0106049082573d7ddc5cd73e5f22e27.debug debian/fastx-toolkit/usr/bin/fasta_nucleotide_changer install -d debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/c0 objcopy --only-keep-debug --compress-debug-sections debian/fastx-toolkit/usr/bin/fastq_quality_trimmer debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/c0/0d6d68bc5297a933d8f246b7335cd5ee49fc57.debug chmod 0644 -- debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/c0/0d6d68bc5297a933d8f246b7335cd5ee49fc57.debug chown 0:0 -- debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/c0/0d6d68bc5297a933d8f246b7335cd5ee49fc57.debug strip --remove-section=.comment --remove-section=.note debian/fastx-toolkit/usr/bin/fastq_quality_trimmer objcopy --add-gnu-debuglink debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/c0/0d6d68bc5297a933d8f246b7335cd5ee49fc57.debug debian/fastx-toolkit/usr/bin/fastq_quality_trimmer install -d debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/e3 objcopy --only-keep-debug --compress-debug-sections debian/fastx-toolkit/usr/bin/fastx_renamer debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/e3/e7eaae68e21725f3dcbc6e9e14ac6f85b3154c.debug chmod 0644 -- debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/e3/e7eaae68e21725f3dcbc6e9e14ac6f85b3154c.debug chown 0:0 -- debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/e3/e7eaae68e21725f3dcbc6e9e14ac6f85b3154c.debug strip --remove-section=.comment --remove-section=.note debian/fastx-toolkit/usr/bin/fastx_renamer objcopy --add-gnu-debuglink debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/e3/e7eaae68e21725f3dcbc6e9e14ac6f85b3154c.debug debian/fastx-toolkit/usr/bin/fastx_renamer install -d debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/a0 objcopy --only-keep-debug --compress-debug-sections debian/fastx-toolkit/usr/bin/fastx_uncollapser debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/a0/18e3d5fbfed1f2a7781b78af738ac75cb5a9dd.debug chmod 0644 -- debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/a0/18e3d5fbfed1f2a7781b78af738ac75cb5a9dd.debug chown 0:0 -- debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/a0/18e3d5fbfed1f2a7781b78af738ac75cb5a9dd.debug strip --remove-section=.comment --remove-section=.note debian/fastx-toolkit/usr/bin/fastx_uncollapser objcopy --add-gnu-debuglink debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/a0/18e3d5fbfed1f2a7781b78af738ac75cb5a9dd.debug debian/fastx-toolkit/usr/bin/fastx_uncollapser install -d debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/97 objcopy --only-keep-debug --compress-debug-sections debian/fastx-toolkit/usr/bin/fasta_formatter debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/97/42f018e10fb9b7687675e3fc2b787832e05d12.debug chmod 0644 -- debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/97/42f018e10fb9b7687675e3fc2b787832e05d12.debug chown 0:0 -- debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/97/42f018e10fb9b7687675e3fc2b787832e05d12.debug strip --remove-section=.comment --remove-section=.note debian/fastx-toolkit/usr/bin/fasta_formatter objcopy --add-gnu-debuglink debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/97/42f018e10fb9b7687675e3fc2b787832e05d12.debug debian/fastx-toolkit/usr/bin/fasta_formatter install -d debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/9b objcopy --only-keep-debug --compress-debug-sections debian/fastx-toolkit/usr/bin/fastq_masker debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/9b/fbe46080f67a66925bd1c951b17b0b917bef17.debug chmod 0644 -- debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/9b/fbe46080f67a66925bd1c951b17b0b917bef17.debug chown 0:0 -- debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/9b/fbe46080f67a66925bd1c951b17b0b917bef17.debug strip --remove-section=.comment --remove-section=.note debian/fastx-toolkit/usr/bin/fastq_masker objcopy --add-gnu-debuglink debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/9b/fbe46080f67a66925bd1c951b17b0b917bef17.debug debian/fastx-toolkit/usr/bin/fastq_masker install -d debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/90 objcopy --only-keep-debug --compress-debug-sections debian/fastx-toolkit/usr/bin/fastx_artifacts_filter debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/90/f23d96357efc8f9902b359eb0b13347bd0b226.debug chmod 0644 -- debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/90/f23d96357efc8f9902b359eb0b13347bd0b226.debug chown 0:0 -- debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/90/f23d96357efc8f9902b359eb0b13347bd0b226.debug strip --remove-section=.comment --remove-section=.note debian/fastx-toolkit/usr/bin/fastx_artifacts_filter objcopy --add-gnu-debuglink debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/90/f23d96357efc8f9902b359eb0b13347bd0b226.debug debian/fastx-toolkit/usr/bin/fastx_artifacts_filter install -d debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/b2 objcopy --only-keep-debug --compress-debug-sections debian/fastx-toolkit/usr/bin/fastx_collapser debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/b2/c1c926ab8951c29c5bf87ffaa1cb5d7de90cc5.debug chmod 0644 -- debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/b2/c1c926ab8951c29c5bf87ffaa1cb5d7de90cc5.debug chown 0:0 -- debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/b2/c1c926ab8951c29c5bf87ffaa1cb5d7de90cc5.debug strip --remove-section=.comment --remove-section=.note debian/fastx-toolkit/usr/bin/fastx_collapser objcopy --add-gnu-debuglink debian/.debhelper/fastx-toolkit/dbgsym-root/usr/lib/debug/.build-id/b2/c1c926ab8951c29c5bf87ffaa1cb5d7de90cc5.debug debian/fastx-toolkit/usr/bin/fastx_collapser install -d debian/.debhelper/fastx-toolkit/dbgsym-root/usr/share/doc ln -s fastx-toolkit debian/.debhelper/fastx-toolkit/dbgsym-root/usr/share/doc/fastx-toolkit-dbgsym dh_makeshlibs -a rm -f debian/fastx-toolkit/DEBIAN/shlibs dh_shlibdeps -a install -d debian/fastx-toolkit/DEBIAN dpkg-shlibdeps -Tdebian/fastx-toolkit.substvars debian/fastx-toolkit/usr/bin/fastx_trimmer debian/fastx-toolkit/usr/bin/fastx_clipper debian/fastx-toolkit/usr/bin/fastq_quality_converter debian/fastx-toolkit/usr/bin/fastq_to_fasta debian/fastx-toolkit/usr/bin/fastq_quality_filter debian/fastx-toolkit/usr/bin/fastx_quality_stats debian/fastx-toolkit/usr/bin/fastx_reverse_complement debian/fastx-toolkit/usr/bin/fasta_nucleotide_changer debian/fastx-toolkit/usr/bin/fastq_quality_trimmer debian/fastx-toolkit/usr/bin/fastx_renamer debian/fastx-toolkit/usr/bin/fastx_uncollapser debian/fastx-toolkit/usr/bin/fasta_formatter debian/fastx-toolkit/usr/bin/fastq_masker debian/fastx-toolkit/usr/bin/fastx_artifacts_filter debian/fastx-toolkit/usr/bin/fastx_collapser dh_installdeb -a dh_gencontrol -a echo misc:Depends= >> debian/fastx-toolkit.substvars echo misc:Pre-Depends= >> debian/fastx-toolkit.substvars install -d debian/.debhelper/fastx-toolkit/dbgsym-root/DEBIAN dpkg-gencontrol -pfastx-toolkit -ldebian/changelog -Tdebian/fastx-toolkit.substvars -Pdebian/.debhelper/fastx-toolkit/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=extra -UHomepage -DAuto-Built-Package=debug-symbols -DPackage=fastx-toolkit-dbgsym "-DDepends=fastx-toolkit (= \${binary:Version})" "-DDescription=Debug symbols for fastx-toolkit" "-DBuild-Ids=0ffc664edb03be0d6828e11deecc3524d3b7518e 1ab433433e362967be8e3e731db6b422233a0fe6 3e98560dde42113e51b1143c7675221f2bfd38e4 50e7bd3db0106049082573d7ddc5cd73e5f22e27 656f50e4cad7b259bdb7c79dbb939f6b3df8f603 90f23d96357efc8f9902b359eb0b13347bd0b226 9742f018e10fb9b7687675e3fc2b787832e05d12 9bfbe46080f67a66925bd1c951b17b0b917bef17 a018e3d5fbfed1f2a7781b78af738ac75cb5a9dd b2c1c926ab8951c29c5bf87ffaa1cb5d7de90cc5 b4340e3afa4157d49cf5a957af634105bb41dc91 c00d6d68bc5297a933d8f246b7335cd5ee49fc57 e3e7eaae68e21725f3dcbc6e9e14ac6f85b3154c e56f2042e0b72258ac4fc16427dd0596e9bcd10b ec8f660f8a34a00cd6cc344603353b901f221d87" -DSection=debug -DPackage-Type=ddeb -UMulti-Arch -UReplaces -UBreaks dpkg-gencontrol: warning: package fastx-toolkit: unused substitution variable ${perl:Depends} chmod 0644 -- debian/.debhelper/fastx-toolkit/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/fastx-toolkit/dbgsym-root/DEBIAN/control dpkg-gencontrol -pfastx-toolkit -ldebian/changelog -Tdebian/fastx-toolkit.substvars -Pdebian/fastx-toolkit -UMulti-Arch dpkg-gencontrol: warning: package fastx-toolkit: unused substitution variable ${perl:Depends} chmod 0644 -- debian/fastx-toolkit/DEBIAN/control chown 0:0 -- debian/fastx-toolkit/DEBIAN/control dh_md5sums -a (cd debian/fastx-toolkit >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums) >/dev/null chmod 0644 -- debian/fastx-toolkit/DEBIAN/md5sums chown 0:0 -- debian/fastx-toolkit/DEBIAN/md5sums (cd debian/.debhelper/fastx-toolkit/dbgsym-root >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums) >/dev/null chmod 0644 -- debian/.debhelper/fastx-toolkit/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/fastx-toolkit/dbgsym-root/DEBIAN/md5sums dh_builddeb -a install -d debian/.debhelper/scratch-space/build-fastx-toolkit dpkg-deb -z1 -Zxz -Sextreme --build debian/.debhelper/fastx-toolkit/dbgsym-root debian/.debhelper/scratch-space/build-fastx-toolkit INFO: pkgstriptranslations version 131 pkgstriptranslations: processing fastx-toolkit-dbgsym (in debian/.debhelper/fastx-toolkit/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/.debhelper/fastx-toolkit/dbgsym-root/DEBIAN/control, package fastx-toolkit-dbgsym, directory debian/.debhelper/fastx-toolkit/dbgsym-root pkgstripfiles: Running PNG optimization (using 4 cpus) for package fastx-toolkit-dbgsym ... pkgstripfiles: No PNG files. dpkg-deb: building package 'fastx-toolkit-dbgsym' in 'debian/.debhelper/scratch-space/build-fastx-toolkit/fastx-toolkit-dbgsym_0.0.14-4_i386.deb'. Renaming fastx-toolkit-dbgsym_0.0.14-4_i386.deb to fastx-toolkit-dbgsym_0.0.14-4_i386.ddeb mv -f debian/.debhelper/scratch-space/build-fastx-toolkit/fastx-toolkit-dbgsym_0.0.14-4_i386.deb ../fastx-toolkit-dbgsym_0.0.14-4_i386.ddeb dpkg-deb --build debian/fastx-toolkit .. INFO: pkgstriptranslations version 131 pkgstriptranslations: processing fastx-toolkit (in debian/fastx-toolkit); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/fastx-toolkit/DEBIAN/control, package fastx-toolkit, directory debian/fastx-toolkit .. removing usr/share/doc/fastx-toolkit/changelog.gz pkgstripfiles: Running PNG optimization (using 4 cpus) for package fastx-toolkit ... pkgstripfiles: No PNG files. dpkg-deb: building package 'fastx-toolkit' in '../fastx-toolkit_0.0.14-4_i386.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../fastx-toolkit_0.0.14-4_i386.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build fastx-toolkit-0.0.14 dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20170607-1108 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ fastx-toolkit_0.0.14-4_i386.changes: ------------------------------------ Format: 1.8 Date: Mon, 05 Jun 2017 17:55:44 -0400 Source: fastx-toolkit Binary: fastx-toolkit Architecture: i386 Version: 0.0.14-4 Distribution: artful-proposed Urgency: low Maintainer: Launchpad Build Daemon Changed-By: Nadiya Sitdykova Description: fastx-toolkit - FASTQ/A short nucleotide reads pre-processing tools Changes: fastx-toolkit (0.0.14-4) unstable; urgency=low . * Team upload. . [ Nadiya Sitdykova ] * Add autopkgtest test-suite * Add tests for fastx_quality_stats and fastq_quality_filter * Fix typos in fastq_quality_filter test * Additional tests * Add info about -Q option to help screens for commmands, where it's relevant Checksums-Sha1: b81925a10d88af307cc22b3359197238823e8979 421628 fastx-toolkit-dbgsym_0.0.14-4_i386.ddeb defa007078826e4236d17da03ded10ff78e2aa7a 5809 fastx-toolkit_0.0.14-4_i386.buildinfo a25becd1aa18c78f8126a72f85767e83e3f5e96f 116500 fastx-toolkit_0.0.14-4_i386.deb Checksums-Sha256: fcd974b042e454d2a71f40663796fc1176af29ba22f007f97a0b53d8ccdfe833 421628 fastx-toolkit-dbgsym_0.0.14-4_i386.ddeb ec93877975fe68289e3b8e5725f623e6528a149ebb4140cbf92bdf13bffd85d7 5809 fastx-toolkit_0.0.14-4_i386.buildinfo d778312c1d923f9765b8cc4451a455f5e3601c20819090b6d7030e326a5a1d35 116500 fastx-toolkit_0.0.14-4_i386.deb Files: 194f13041e505bfb0da99977adcb740e 421628 debug extra fastx-toolkit-dbgsym_0.0.14-4_i386.ddeb 8dd8386a1d10541f7793f6a11b03fbbe 5809 science optional fastx-toolkit_0.0.14-4_i386.buildinfo d06e8a5128b918f516b632a6d91a8d21 116500 science optional fastx-toolkit_0.0.14-4_i386.deb +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ fastx-toolkit_0.0.14-4_i386.deb ------------------------------- new debian package, version 2.0. size 116500 bytes: control archive=3492 bytes. 1143 bytes, 20 lines control 8703 bytes, 103 lines md5sums Package: fastx-toolkit Version: 0.0.14-4 Architecture: i386 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 537 Depends: libc6 (>= 2.4), libgcc1 (>= 1:3.0), libgtextutils0v5, libstdc++6 (>= 5.2), libgd-graph-perl, libperlio-gzip-perl Section: science Priority: optional Homepage: http://hannonlab.cshl.edu/fastx_toolkit/ Description: FASTQ/A short nucleotide reads pre-processing tools The FASTX-Toolkit is a collection of command line tools for preprocessing short nucleotide reads in FASTA and FASTQ formats, usually produced by Next-Generation sequencing machines. The main processing of such FASTA/FASTQ files is mapping (aligning) the sequences to reference genomes or other databases using specialized programs like BWA, Bowtie and many others. However, it is sometimes more productive to preprocess the FASTA/FASTQ files before mapping the sequences to the genome—manipulating the sequences to produce better mapping results. 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+------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Not removing build depends: as requested Keeping session: +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: i386 Build-Space: 13084 Build-Time: 62 Distribution: artful-proposed Host Architecture: i386 Install-Time: 17 Job: fastx-toolkit_0.0.14-4.dsc Machine Architecture: amd64 Package: fastx-toolkit Package-Time: 80 Source-Version: 0.0.14-4 Space: 13084 Status: successful Version: 0.0.14-4 -------------------------------------------------------------------------------- Finished at 20170607-1108 Build needed 00:01:20, 13084k disc space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['scan-for-processes', 'PACKAGEBUILD-12704487'] Scanning for processes to kill in build /home/buildd/build-PACKAGEBUILD-12704487/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', 'PACKAGEBUILD-12704487'] Unmounting chroot for build PACKAGEBUILD-12704487... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', 'PACKAGEBUILD-12704487'] Removing build PACKAGEBUILD-12704487