https://launchpad.net/ubuntu/+source/fitgcp/0.0.20150429-3/+build/17965469 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-arm64-019 4.4.0-166-generic #195-Ubuntu SMP Tue Oct 1 09:36:37 UTC 2019 aarch64 Buildd toolchain package versions: launchpad-buildd_178 python-lpbuildd_178 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.6 dpkg-dev_1.18.4ubuntu1.6 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 25 Oct 21:08:09 ntpdate[1927]: adjust time server 10.211.37.1 offset 0.013596 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=focal --arch=arm64 PACKAGEBUILD-17965469 --image-type chroot /home/buildd/filecache-default/9d93b4075e16ce7cfbdf01f21507152b0a173b17 Creating target for build PACKAGEBUILD-17965469 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=focal --arch=arm64 PACKAGEBUILD-17965469 Starting target for build PACKAGEBUILD-17965469 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=focal --arch=arm64 PACKAGEBUILD-17965469 'deb http://ftpmaster.internal/ubuntu focal main universe' 'deb http://ftpmaster.internal/ubuntu focal-security main universe' 'deb http://ftpmaster.internal/ubuntu focal-updates main universe' 'deb http://ftpmaster.internal/ubuntu focal-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-17965469 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=focal --arch=arm64 PACKAGEBUILD-17965469 Updating target for build PACKAGEBUILD-17965469 Get:1 http://ftpmaster.internal/ubuntu focal InRelease [255 kB] Get:2 http://ftpmaster.internal/ubuntu focal-security InRelease [79.7 kB] Get:3 http://ftpmaster.internal/ubuntu focal-updates InRelease [79.7 kB] Get:4 http://ftpmaster.internal/ubuntu focal-proposed InRelease [107 kB] Get:5 http://ftpmaster.internal/ubuntu focal/main arm64 Packages [942 kB] Get:6 http://ftpmaster.internal/ubuntu focal/main Translation-en [505 kB] Get:7 http://ftpmaster.internal/ubuntu focal/universe arm64 Packages [8615 kB] Get:8 http://ftpmaster.internal/ubuntu focal/universe Translation-en [5191 kB] Get:9 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 Packages [87.9 kB] Get:10 http://ftpmaster.internal/ubuntu focal-proposed/main Translation-en [53.2 kB] Get:11 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 Packages [190 kB] Get:12 http://ftpmaster.internal/ubuntu focal-proposed/universe Translation-en [112 kB] Fetched 16.2 MB in 6s (2930 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libperl5.28 perl-modules-5.28 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: libperl5.30 perl-modules-5.30 The following packages will be upgraded: base-files binutils binutils-aarch64-linux-gnu binutils-common bzip2 cpp-9 debianutils g++-9 gcc-9 gcc-9-base libacl1 libapparmor1 libasan5 libatomic1 libattr1 libaudit-common libaudit1 libbinutils libbz2-1.0 libcap-ng0 libcc1-0 libcryptsetup12 libgcc-9-dev libgcc1 libgcrypt20 libgomp1 libitm1 libjson-c4 libkmod2 liblockfile-bin liblockfile1 liblsan0 liblz4-1 libp11-kit0 libseccomp2 libselinux1 libsemanage-common libsemanage1 libstdc++-9-dev libstdc++6 libsystemd0 libtsan0 libubsan1 libudev1 lsb-base perl perl-base systemd systemd-sysv sysvinit-utils 50 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 46.9 MB of archives. After this operation, 46.4 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu focal/main arm64 base-files arm64 11ubuntu1 [60.4 kB] Get:2 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 debianutils arm64 4.9 [85.7 kB] Get:3 http://ftpmaster.internal/ubuntu focal/main arm64 perl-modules-5.30 all 5.30.0-7 [2738 kB] Get:4 http://ftpmaster.internal/ubuntu focal/main arm64 libperl5.30 arm64 5.30.0-7 [3740 kB] Get:5 http://ftpmaster.internal/ubuntu focal/main arm64 perl arm64 5.30.0-7 [224 kB] Get:6 http://ftpmaster.internal/ubuntu focal/main arm64 perl-base arm64 5.30.0-7 [1390 kB] Get:7 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 bzip2 arm64 1.0.8-2 [33.0 kB] Get:8 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libbz2-1.0 arm64 1.0.8-2 [32.9 kB] Get:9 http://ftpmaster.internal/ubuntu focal/main arm64 lsb-base all 11.1.0ubuntu1 [12.2 kB] Get:10 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 sysvinit-utils arm64 2.96~beta-3ubuntu2 [20.5 kB] Get:11 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 systemd-sysv arm64 243-2ubuntu1 [9364 B] Get:12 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libacl1 arm64 2.2.53-5 [17.7 kB] Get:13 http://ftpmaster.internal/ubuntu focal/main arm64 libapparmor1 arm64 2.13.3-5ubuntu2 [33.5 kB] Get:14 http://ftpmaster.internal/ubuntu focal/main arm64 libaudit-common all 1:2.8.5-2ubuntu2 [4080 B] Get:15 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libcap-ng0 arm64 0.7.9-2.1 [10.5 kB] Get:16 http://ftpmaster.internal/ubuntu focal/main arm64 libaudit1 arm64 1:2.8.5-2ubuntu2 [38.3 kB] Get:17 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libjson-c4 arm64 0.13.1+dfsg-6 [28.0 kB] Get:18 http://ftpmaster.internal/ubuntu focal/main arm64 libcryptsetup12 arm64 2:2.2.1-1ubuntu1 [165 kB] Get:19 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libkmod2 arm64 26-3ubuntu1 [39.5 kB] Get:20 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 liblz4-1 arm64 1.9.1-2 [50.0 kB] Get:21 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libseccomp2 arm64 2.4.1-0ubuntu0.19.10.4 [39.9 kB] Get:22 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 systemd arm64 243-2ubuntu1 [3338 kB] Get:23 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libsystemd0 arm64 243-2ubuntu1 [243 kB] Get:24 http://ftpmaster.internal/ubuntu focal/main arm64 libcc1-0 arm64 9.2.1-12ubuntu1 [46.2 kB] Get:25 http://ftpmaster.internal/ubuntu focal/main arm64 binutils-aarch64-linux-gnu arm64 2.33.1-1ubuntu1 [2021 kB] Get:26 http://ftpmaster.internal/ubuntu focal/main arm64 libbinutils arm64 2.33.1-1ubuntu1 [470 kB] Get:27 http://ftpmaster.internal/ubuntu focal/main arm64 binutils-common arm64 2.33.1-1ubuntu1 [203 kB] Get:28 http://ftpmaster.internal/ubuntu focal/main arm64 binutils arm64 2.33.1-1ubuntu1 [3376 B] Get:29 http://ftpmaster.internal/ubuntu focal/main arm64 libgomp1 arm64 9.2.1-12ubuntu1 [80.5 kB] Get:30 http://ftpmaster.internal/ubuntu focal/main arm64 libitm1 arm64 9.2.1-12ubuntu1 [25.0 kB] Get:31 http://ftpmaster.internal/ubuntu focal/main arm64 libatomic1 arm64 9.2.1-12ubuntu1 [9172 B] Get:32 http://ftpmaster.internal/ubuntu focal/main arm64 libasan5 arm64 9.2.1-12ubuntu1 [364 kB] Get:33 http://ftpmaster.internal/ubuntu focal/main arm64 liblsan0 arm64 9.2.1-12ubuntu1 [126 kB] Get:34 http://ftpmaster.internal/ubuntu focal/main arm64 libtsan0 arm64 9.2.1-12ubuntu1 [283 kB] Get:35 http://ftpmaster.internal/ubuntu focal/main arm64 libubsan1 arm64 9.2.1-12ubuntu1 [121 kB] Get:36 http://ftpmaster.internal/ubuntu focal/main arm64 gcc-9-base arm64 9.2.1-12ubuntu1 [19.4 kB] Get:37 http://ftpmaster.internal/ubuntu focal/main arm64 libstdc++6 arm64 9.2.1-12ubuntu1 [467 kB] Get:38 http://ftpmaster.internal/ubuntu focal/main arm64 g++-9 arm64 9.2.1-12ubuntu1 [9463 kB] Get:39 http://ftpmaster.internal/ubuntu focal/main arm64 libstdc++-9-dev arm64 9.2.1-12ubuntu1 [1673 kB] Get:40 http://ftpmaster.internal/ubuntu focal/main arm64 libgcc-9-dev arm64 9.2.1-12ubuntu1 [914 kB] Get:41 http://ftpmaster.internal/ubuntu focal/main arm64 gcc-9 arm64 9.2.1-12ubuntu1 [9106 kB] Get:42 http://ftpmaster.internal/ubuntu focal/main arm64 cpp-9 arm64 9.2.1-12ubuntu1 [8352 kB] Get:43 http://ftpmaster.internal/ubuntu focal/main arm64 libgcc1 arm64 1:9.2.1-12ubuntu1 [34.2 kB] Get:44 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libattr1 arm64 1:2.4.48-5 [12.5 kB] Get:45 http://ftpmaster.internal/ubuntu focal/main arm64 libgcrypt20 arm64 1.8.5-3ubuntu1 [350 kB] Get:46 http://ftpmaster.internal/ubuntu focal/main arm64 libselinux1 arm64 2.9-2build1 [65.6 kB] Get:47 http://ftpmaster.internal/ubuntu focal/main arm64 libsemanage-common all 2.9-3build1 [9736 B] Get:48 http://ftpmaster.internal/ubuntu focal/main arm64 libsemanage1 arm64 2.9-3build1 [79.3 kB] Get:49 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libudev1 arm64 243-2ubuntu1 [73.4 kB] Get:50 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libp11-kit0 arm64 0.23.18.1-2 [177 kB] Get:51 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 liblockfile-bin arm64 1.16-1 [11.2 kB] Get:52 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 liblockfile1 arm64 1.16-1 [6432 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 46.9 MB in 2s (27.6 MB/s) (Reading database ... 12731 files and directories currently installed.) Preparing to unpack .../base-files_11ubuntu1_arm64.deb ... Unpacking base-files (11ubuntu1) over (10.2ubuntu7) ... Setting up base-files (11ubuntu1) ... Installing new version of config file /etc/debian_version ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... Updating /root/.profile to current default. (Reading database ... 12731 files and directories currently installed.) Preparing to unpack .../debianutils_4.9_arm64.deb ... Unpacking debianutils (4.9) over (4.8.6.3) ... Setting up debianutils (4.9) ... (Reading database ... 12731 files and directories currently installed.) Preparing to unpack .../perl_5.30.0-7_arm64.deb ... Unpacking perl (5.30.0-7) over (5.28.1-6build1) ... Replacing files in old package perl-base (5.28.1-6build1) ... Selecting previously unselected package perl-modules-5.30. Preparing to unpack .../perl-modules-5.30_5.30.0-7_all.deb ... 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Setting up binutils-aarch64-linux-gnu (2.33.1-1ubuntu1) ... Setting up binutils (2.33.1-1ubuntu1) ... Setting up libgcc-9-dev:arm64 (9.2.1-12ubuntu1) ... Setting up perl (5.30.0-7) ... Setting up libcryptsetup12:arm64 (2:2.2.1-1ubuntu1) ... Setting up gcc-9 (9.2.1-12ubuntu1) ... Setting up libstdc++-9-dev:arm64 (9.2.1-12ubuntu1) ... Setting up systemd (243-2ubuntu1) ... Installing new version of config file /etc/systemd/networkd.conf ... Installing new version of config file /etc/systemd/system.conf ... Installing new version of config file /etc/systemd/user.conf ... Initializing machine ID from KVM UUID. Setting up g++-9 (9.2.1-12ubuntu1) ... Setting up systemd-sysv (243-2ubuntu1) ... Processing triggers for libc-bin (2.30-0ubuntu2) ... RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-17965469 arm64 focal-proposed -c chroot:build-PACKAGEBUILD-17965469 --arch=arm64 --dist=focal-proposed --nolog fitgcp_0.0.20150429-3.dsc Initiating build PACKAGEBUILD-17965469 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-166-generic #195-Ubuntu SMP Tue Oct 1 09:36:37 UTC 2019 aarch64 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on bos02-arm64-019.buildd +==============================================================================+ | fitgcp 0.0.20150429-3 (arm64) 25 Oct 2019 21:08 | +==============================================================================+ Package: fitgcp Version: 0.0.20150429-3 Source Version: 0.0.20150429-3 Distribution: focal-proposed Machine Architecture: arm64 Host Architecture: arm64 Build Architecture: arm64 I: NOTICE: Log filtering will replace 'build/fitgcp-o8dBRS/fitgcp-0.0.20150429' with '<>' I: NOTICE: Log filtering will replace 'build/fitgcp-o8dBRS' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-17965469/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- fitgcp_0.0.20150429-3.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-nlRkpE/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-nlRkpE/apt_archive ./ InRelease Get:2 copy:/<>/resolver-nlRkpE/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-nlRkpE/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-nlRkpE/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-nlRkpE/apt_archive ./ Packages [524 B] Fetched 2857 B in 0s (124 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libperl5.28 perl-modules-5.28 Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 856 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-nlRkpE/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [856 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 856 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 14659 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_arm64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper-compat (= 12), dh-python, python3, python3-pysam Filtered Build-Depends: debhelper-compat (= 12), dh-python, python3, python3-pysam dpkg-deb: building package 'sbuild-build-depends-fitgcp-dummy' in '/<>/resolver-Oq8j_h/apt_archive/sbuild-build-depends-fitgcp-dummy.deb'. Ign:1 copy:/<>/resolver-Oq8j_h/apt_archive ./ InRelease Get:2 copy:/<>/resolver-Oq8j_h/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-Oq8j_h/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-Oq8j_h/apt_archive ./ Sources [231 B] Get:5 copy:/<>/resolver-Oq8j_h/apt_archive ./ Packages [549 B] Fetched 2899 B in 0s (139 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install fitgcp build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libperl5.28 perl-modules-5.28 Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasn1-8-heimdal libbsd0 libcroco3 libcurl3-gnutls libdebhelper-perl libdeflate0 libelf1 libexpat1 libfile-stripnondeterminism-perl libglib2.0-0 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhts2 libhx509-5-heimdal libicu63 libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common libmagic-mgc libmagic1 libmpdec2 libnghttp2-14 libpipeline1 libpsl5 libpython3-stdlib libpython3.7-minimal libpython3.7-stdlib libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh-4 libsub-override-perl libtool libuchardet0 libwind0-heimdal libxml2 m4 man-db mime-support po-debconf python3 python3-distutils python3-lib2to3 python3-minimal python3-pysam python3.7 python3.7-minimal Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff krb5-doc krb5-user libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl python3-doc python3-tk python3-venv python3.7-venv python3.7-doc binfmt-support Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs krb5-locales publicsuffix libsasl2-modules libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasn1-8-heimdal libbsd0 libcroco3 libcurl3-gnutls libdebhelper-perl libdeflate0 libelf1 libexpat1 libfile-stripnondeterminism-perl libglib2.0-0 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhts2 libhx509-5-heimdal libicu63 libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common libmagic-mgc libmagic1 libmpdec2 libnghttp2-14 libpipeline1 libpsl5 libpython3-stdlib libpython3.7-minimal libpython3.7-stdlib libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh-4 libsub-override-perl libtool libuchardet0 libwind0-heimdal libxml2 m4 man-db mime-support po-debconf python3 python3-distutils python3-lib2to3 python3-minimal python3-pysam python3.7 python3.7-minimal sbuild-build-depends-fitgcp-dummy 0 upgraded, 73 newly installed, 0 to remove and 0 not upgraded. Need to get 26.1 MB of archives. After this operation, 111 MB of additional disk space will be used. Get:1 copy:/<>/resolver-Oq8j_h/apt_archive ./ sbuild-build-depends-fitgcp-dummy 0.invalid.0 [876 B] Get:2 http://ftpmaster.internal/ubuntu focal/main arm64 libpython3.7-minimal arm64 3.7.5-1ubuntu1 [544 kB] Get:3 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libexpat1 arm64 2.2.9-1 [61.3 kB] Get:4 http://ftpmaster.internal/ubuntu focal/main arm64 python3.7-minimal arm64 3.7.5-1ubuntu1 [1719 kB] Get:5 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 python3-minimal arm64 3.7.5-1ubuntu1 [23.3 kB] Get:6 http://ftpmaster.internal/ubuntu focal/main arm64 mime-support all 3.64ubuntu1 [30.6 kB] Get:7 http://ftpmaster.internal/ubuntu focal/main arm64 libmpdec2 arm64 2.4.2-2 [74.0 kB] Get:8 http://ftpmaster.internal/ubuntu focal/main arm64 libpython3.7-stdlib arm64 3.7.5-1ubuntu1 [1712 kB] Get:9 http://ftpmaster.internal/ubuntu focal/main arm64 python3.7 arm64 3.7.5-1ubuntu1 [301 kB] Get:10 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libpython3-stdlib arm64 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arm64 libcurl3-gnutls arm64 7.65.3-1ubuntu3 [209 kB] Get:71 http://ftpmaster.internal/ubuntu focal/universe arm64 libdeflate0 arm64 1.2-1 [51.4 kB] Get:72 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libhts2 arm64 1.9-11 [264 kB] Get:73 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 python3-pysam arm64 0.15.2+ds-2build1 [2319 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 26.1 MB in 1s (19.7 MB/s) Selecting previously unselected package libpython3.7-minimal:arm64. (Reading database ... 14659 files and directories currently installed.) Preparing to unpack .../libpython3.7-minimal_3.7.5-1ubuntu1_arm64.deb ... Unpacking libpython3.7-minimal:arm64 (3.7.5-1ubuntu1) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../libexpat1_2.2.9-1_arm64.deb ... Unpacking libexpat1:arm64 (2.2.9-1) ... Selecting previously unselected package python3.7-minimal. Preparing to unpack .../python3.7-minimal_3.7.5-1ubuntu1_arm64.deb ... Unpacking python3.7-minimal (3.7.5-1ubuntu1) ... Setting up libpython3.7-minimal:arm64 (3.7.5-1ubuntu1) ... Setting up libexpat1:arm64 (2.2.9-1) ... Setting up python3.7-minimal (3.7.5-1ubuntu1) ... Selecting previously unselected package python3-minimal. (Reading database ... 14908 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.7.5-1ubuntu1_arm64.deb ... Unpacking python3-minimal (3.7.5-1ubuntu1) ... Selecting previously unselected package mime-support. 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Selecting previously unselected package libroken18-heimdal:arm64. Preparing to unpack .../43-libroken18-heimdal_7.5.0+dfsg-3build1_arm64.deb ... Unpacking libroken18-heimdal:arm64 (7.5.0+dfsg-3build1) ... Selecting previously unselected package libasn1-8-heimdal:arm64. Preparing to unpack .../44-libasn1-8-heimdal_7.5.0+dfsg-3build1_arm64.deb ... Unpacking libasn1-8-heimdal:arm64 (7.5.0+dfsg-3build1) ... Selecting previously unselected package libheimbase1-heimdal:arm64. Preparing to unpack .../45-libheimbase1-heimdal_7.5.0+dfsg-3build1_arm64.deb ... Unpacking libheimbase1-heimdal:arm64 (7.5.0+dfsg-3build1) ... Selecting previously unselected package libhcrypto4-heimdal:arm64. Preparing to unpack .../46-libhcrypto4-heimdal_7.5.0+dfsg-3build1_arm64.deb ... Unpacking libhcrypto4-heimdal:arm64 (7.5.0+dfsg-3build1) ... Selecting previously unselected package libwind0-heimdal:arm64. Preparing to unpack .../47-libwind0-heimdal_7.5.0+dfsg-3build1_arm64.deb ... 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Preparing to unpack .../57-librtmp1_2.4+20151223.gitfa8646d.1-2_arm64.deb ... Unpacking librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2) ... Selecting previously unselected package libssh-4:arm64. Preparing to unpack .../58-libssh-4_0.9.0-1ubuntu1_arm64.deb ... Unpacking libssh-4:arm64 (0.9.0-1ubuntu1) ... Selecting previously unselected package libcurl3-gnutls:arm64. Preparing to unpack .../59-libcurl3-gnutls_7.65.3-1ubuntu3_arm64.deb ... Unpacking libcurl3-gnutls:arm64 (7.65.3-1ubuntu3) ... Selecting previously unselected package libdeflate0:arm64. Preparing to unpack .../60-libdeflate0_1.2-1_arm64.deb ... Unpacking libdeflate0:arm64 (1.2-1) ... Selecting previously unselected package libhts2:arm64. Preparing to unpack .../61-libhts2_1.9-11_arm64.deb ... Unpacking libhts2:arm64 (1.9-11) ... Selecting previously unselected package python3-pysam. Preparing to unpack .../62-python3-pysam_0.15.2+ds-2build1_arm64.deb ... Unpacking python3-pysam (0.15.2+ds-2build1) ... Selecting previously unselected package sbuild-build-depends-fitgcp-dummy. Preparing to unpack .../63-sbuild-build-depends-fitgcp-dummy_0.invalid.0_arm64.deb ... Unpacking sbuild-build-depends-fitgcp-dummy (0.invalid.0) ... Setting up libpipeline1:arm64 (1.5.1-2) ... Setting up libkeyutils1:arm64 (1.6-6ubuntu1) ... Setting up libpsl5:arm64 (0.20.2-2) ... Setting up mime-support (3.64ubuntu1) ... Setting up libmagic-mgc (1:5.37-6) ... Setting up libarchive-zip-perl (1.67-1) ... Setting up libglib2.0-0:arm64 (2.62.2-1) ... No schema files found: doing nothing. Setting up libdebhelper-perl (12.7ubuntu1) ... Setting up libnghttp2-14:arm64 (1.39.2-1) ... Setting up libmagic1:arm64 (1:5.37-6) ... Setting up libdeflate0:arm64 (1.2-1) ... Setting up gettext-base (0.19.8.1-9) ... Setting up file (1:5.37-6) ... Setting up libldap-common (2.4.48+dfsg-1ubuntu2) ... Setting up libicu63:arm64 (63.2-2) ... Setting up libkrb5support0:arm64 (1.17-6) ... Setting up libsasl2-modules-db:arm64 (2.1.27+dfsg-1build3) ... Setting up autotools-dev (20180224.1) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2) ... Setting up libsigsegv2:arm64 (2.12-2) ... Setting up autopoint (0.19.8.1-9) ... Setting up libk5crypto3:arm64 (1.17-6) ... Setting up libsasl2-2:arm64 (2.1.27+dfsg-1build3) ... Setting up libroken18-heimdal:arm64 (7.5.0+dfsg-3build1) ... Setting up libuchardet0:arm64 (0.0.6-3) ... Setting up libsub-override-perl (0.09-2) ... Setting up libkrb5-3:arm64 (1.17-6) ... Setting up libmpdec2:arm64 (2.4.2-2) ... Setting up libbsd0:arm64 (0.10.0-1) ... Setting up libelf1:arm64 (0.176-1.1) ... Setting up libxml2:arm64 (2.9.4+dfsg1-7ubuntu5) ... Setting up libheimbase1-heimdal:arm64 (7.5.0+dfsg-3build1) ... Setting up libfile-stripnondeterminism-perl (1.6.0-1) ... Setting up libpython3.7-stdlib:arm64 (3.7.5-1ubuntu1) ... Setting up libtool (2.4.6-11) ... Setting up libasn1-8-heimdal:arm64 (7.5.0+dfsg-3build1) ... Setting up m4 (1.4.18-2) ... Setting up libhcrypto4-heimdal:arm64 (7.5.0+dfsg-3build1) ... Setting up libwind0-heimdal:arm64 (7.5.0+dfsg-3build1) ... Setting up bsdmainutils (11.1.2ubuntu2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:arm64 (1.17-6) ... Setting up libcroco3:arm64 (0.6.13-1) ... Setting up libssh-4:arm64 (0.9.0-1ubuntu1) ... Setting up autoconf (2.69-11ubuntu1) ... Setting up dwz (0.13-1) ... Setting up groff-base (1.22.4-3) ... Setting up libpython3-stdlib:arm64 (3.7.5-1ubuntu1) ... Setting up automake (1:1.16.1-4ubuntu3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up python3.7 (3.7.5-1ubuntu1) ... Setting up gettext (0.19.8.1-9) ... Setting up libhx509-5-heimdal:arm64 (7.5.0+dfsg-3build1) ... Setting up python3 (3.7.5-1ubuntu1) ... Setting up man-db (2.9.0-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up intltool-debian (0.35.0+20060710.5) ... Setting up python3-lib2to3 (3.7.5-1build1) ... Setting up libkrb5-26-heimdal:arm64 (7.5.0+dfsg-3build1) ... Setting up python3-distutils (3.7.5-1build1) ... Setting up dh-python (4.20191017ubuntu1) ... Setting up po-debconf (1.0.21) ... Setting up libheimntlm0-heimdal:arm64 (7.5.0+dfsg-3build1) ... Setting up libgssapi3-heimdal:arm64 (7.5.0+dfsg-3build1) ... Setting up libldap-2.4-2:arm64 (2.4.48+dfsg-1ubuntu2) ... Setting up libcurl3-gnutls:arm64 (7.65.3-1ubuntu3) ... Setting up libhts2:arm64 (1.9-11) ... Setting up python3-pysam (0.15.2+ds-2build1) ... Setting up dh-strip-nondeterminism (1.6.0-1) ... Setting up debhelper (12.7ubuntu1) ... Setting up dh-autoreconf (19) ... Setting up sbuild-build-depends-fitgcp-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.30-0ubuntu2) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-166-generic arm64 (aarch64) Toolchain package versions: binutils_2.33.1-1ubuntu1 dpkg-dev_1.19.7ubuntu2 g++-9_9.2.1-12ubuntu1 gcc-9_9.2.1-12ubuntu1 libc6-dev_2.30-0ubuntu2 libstdc++-9-dev_9.2.1-12ubuntu1 libstdc++6_9.2.1-12ubuntu1 linux-libc-dev_5.3.0-18.19 Package versions: adduser_3.118ubuntu1 advancecomp_2.1-2.1 apt_1.9.4 autoconf_2.69-11ubuntu1 automake_1:1.16.1-4ubuntu3 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_11ubuntu1 base-passwd_3.5.46 bash_5.0-4ubuntu1 binutils_2.33.1-1ubuntu1 binutils-aarch64-linux-gnu_2.33.1-1ubuntu1 binutils-common_2.33.1-1ubuntu1 bsdmainutils_11.1.2ubuntu2 bsdutils_1:2.34-0.1ubuntu2 build-essential_12.8ubuntu1 bzip2_1.0.8-2 ca-certificates_20190110 coreutils_8.30-3ubuntu2 cpp_4:9.2.1-3.1ubuntu1 cpp-9_9.2.1-12ubuntu1 dash_0.5.10.2-6 debconf_1.5.73 debhelper_12.7ubuntu1 debianutils_4.9 dh-autoreconf_19 dh-python_4.20191017ubuntu1 dh-strip-nondeterminism_1.6.0-1 diffutils_1:3.7-3 dpkg_1.19.7ubuntu2 dpkg-dev_1.19.7ubuntu2 dwz_0.13-1 e2fsprogs_1.45.3-4ubuntu2 fakeroot_1.24-1 fdisk_2.34-0.1ubuntu2 file_1:5.37-6 findutils_4.6.0+git+20190209-2ubuntu1 g++_4:9.2.1-3.1ubuntu1 g++-9_9.2.1-12ubuntu1 gcc_4:9.2.1-3.1ubuntu1 gcc-9_9.2.1-12ubuntu1 gcc-9-base_9.2.1-12ubuntu1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gpg_2.2.12-1ubuntu3 gpg-agent_2.2.12-1ubuntu3 gpgconf_2.2.12-1ubuntu3 gpgv_2.2.12-1ubuntu3 grep_3.3-1build1 groff-base_1.22.4-3 gzip_1.10-0ubuntu3 hostname_3.22 init_1.57 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-5 libapparmor1_2.13.3-5ubuntu2 libapt-pkg5.90_1.9.4 libarchive-zip-perl_1.67-1 libargon2-1_0~20171227-0.2 libasan5_9.2.1-12ubuntu1 libasn1-8-heimdal_7.5.0+dfsg-3build1 libassuan0_2.5.3-7ubuntu1 libatomic1_9.2.1-12ubuntu1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-2ubuntu2 libaudit1_1:2.8.5-2ubuntu2 libbinutils_2.33.1-1ubuntu1 libblkid1_2.34-0.1ubuntu2 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libc-bin_2.30-0ubuntu2 libc-dev-bin_2.30-0ubuntu2 libc6_2.30-0ubuntu2 libc6-dev_2.30-0ubuntu2 libcap-ng0_0.7.9-2.1 libcap2_1:2.25-2 libcc1-0_9.2.1-12ubuntu1 libcom-err2_1.45.3-4ubuntu2 libcroco3_0.6.13-1 libcryptsetup12_2:2.2.1-1ubuntu1 libcurl3-gnutls_7.65.3-1ubuntu3 libdb5.3_5.3.28+dfsg1-0.6ubuntu1 libdebconfclient0_0.249ubuntu1 libdebhelper-perl_12.7ubuntu1 libdeflate0_1.2-1 libdevmapper1.02.1_2:1.02.155-2ubuntu6 libdpkg-perl_1.19.7ubuntu2 libelf1_0.176-1.1 libexpat1_2.2.9-1 libext2fs2_1.45.3-4ubuntu2 libfakeroot_1.24-1 libfdisk1_2.34-0.1ubuntu2 libffi6_3.2.1-9 libfile-stripnondeterminism-perl_1.6.0-1 libgcc-9-dev_9.2.1-12ubuntu1 libgcc1_1:9.2.1-12ubuntu1 libgcrypt20_1.8.5-3ubuntu1 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libglib2.0-0_2.62.2-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.9-5ubuntu1 libgomp1_9.2.1-12ubuntu1 libgpg-error0_1.36-7 libgssapi-krb5-2_1.17-6 libgssapi3-heimdal_7.5.0+dfsg-3build1 libhcrypto4-heimdal_7.5.0+dfsg-3build1 libheimbase1-heimdal_7.5.0+dfsg-3build1 libheimntlm0-heimdal_7.5.0+dfsg-3build1 libhogweed4_3.4.1-1 libhts2_1.9-11 libhx509-5-heimdal_7.5.0+dfsg-3build1 libicu63_63.2-2 libidn2-0_2.2.0-2 libip4tc2_1.8.3-2ubuntu5 libisl21_0.21-2 libitm1_9.2.1-12ubuntu1 libjson-c4_0.13.1+dfsg-6 libk5crypto3_1.17-6 libkeyutils1_1.6-6ubuntu1 libkmod2_26-3ubuntu1 libkrb5-26-heimdal_7.5.0+dfsg-3build1 libkrb5-3_1.17-6 libkrb5support0_1.17-6 libldap-2.4-2_2.4.48+dfsg-1ubuntu2 libldap-common_2.4.48+dfsg-1ubuntu2 liblockfile-bin_1.16-1 liblockfile1_1.16-1 liblsan0_9.2.1-12ubuntu1 liblz4-1_1.9.1-2 liblzma5_5.2.4-1 libmagic-mgc_1:5.37-6 libmagic1_1:5.37-6 libmount1_2.34-0.1ubuntu2 libmpc3_1.1.0-1 libmpdec2_2.4.2-2 libmpfr6_4.0.2-1 libncurses6_6.1+20190803-1ubuntu1 libncursesw6_6.1+20190803-1ubuntu1 libnettle6_3.4.1-1 libnghttp2-14_1.39.2-1 libnpth0_1.6-1 libp11-kit0_0.23.18.1-2 libpam-modules_1.3.1-5ubuntu1 libpam-modules-bin_1.3.1-5ubuntu1 libpam-runtime_1.3.1-5ubuntu1 libpam0g_1.3.1-5ubuntu1 libpcre2-8-0_10.32-5 libpcre3_2:8.39-12 libperl5.28_5.28.1-6build1 libperl5.30_5.30.0-7 libpipeline1_1.5.1-2 libpng16-16_1.6.37-1 libprocps7_2:3.3.15-2ubuntu3 libpsl5_0.20.2-2 libpython3-stdlib_3.7.5-1ubuntu1 libpython3.7-minimal_3.7.5-1ubuntu1 libpython3.7-stdlib_3.7.5-1ubuntu1 libreadline8_8.0-3 libroken18-heimdal_7.5.0+dfsg-3build1 librtmp1_2.4+20151223.gitfa8646d.1-2 libsasl2-2_2.1.27+dfsg-1build3 libsasl2-modules-db_2.1.27+dfsg-1build3 libseccomp2_2.4.1-0ubuntu0.19.10.4 libselinux1_2.9-2build1 libsemanage-common_2.9-3build1 libsemanage1_2.9-3build1 libsepol1_2.9-2 libsigsegv2_2.12-2 libsmartcols1_2.34-0.1ubuntu2 libsqlite3-0_3.29.0-2 libss2_1.45.3-4ubuntu2 libssh-4_0.9.0-1ubuntu1 libssl1.1_1.1.1c-1ubuntu4 libstdc++-9-dev_9.2.1-12ubuntu1 libstdc++6_9.2.1-12ubuntu1 libsub-override-perl_0.09-2 libsystemd0_243-2ubuntu1 libtasn1-6_4.14-3 libtinfo6_6.1+20190803-1ubuntu1 libtool_2.4.6-11 libtsan0_9.2.1-12ubuntu1 libubsan1_9.2.1-12ubuntu1 libuchardet0_0.0.6-3 libudev1_243-2ubuntu1 libunistring2_0.9.10-2 libuuid1_2.34-0.1ubuntu2 libwind0-heimdal_7.5.0+dfsg-3build1 libxml2_2.9.4+dfsg1-7ubuntu5 libzstd1_1.4.3+dfsg-1 linux-libc-dev_5.3.0-18.19 lockfile-progs_0.1.18 login_1:4.5-1.1ubuntu4 logsave_1.45.3-4ubuntu2 lsb-base_11.1.0ubuntu1 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.9.0-1 mawk_1.3.3-17ubuntu3 mime-support_3.64ubuntu1 mount_2.34-0.1ubuntu2 ncurses-base_6.1+20190803-1ubuntu1 ncurses-bin_6.1+20190803-1ubuntu1 openssl_1.1.1c-1ubuntu4 optipng_0.7.7-1 passwd_1:4.5-1.1ubuntu4 patch_2.7.6-6 perl_5.30.0-7 perl-base_5.30.0-7 perl-modules-5.28_5.28.1-6build1 perl-modules-5.30_5.30.0-7 pinentry-curses_1.1.0-3 pkgbinarymangler_144 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.15-2ubuntu3 python3_3.7.5-1ubuntu1 python3-distutils_3.7.5-1build1 python3-lib2to3_3.7.5-1build1 python3-minimal_3.7.5-1ubuntu1 python3-pysam_0.15.2+ds-2build1 python3.7_3.7.5-1ubuntu1 python3.7-minimal_3.7.5-1ubuntu1 readline-common_8.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-fitgcp-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 systemd_243-2ubuntu1 systemd-sysv_243-2ubuntu1 sysvinit-utils_2.96~beta-3ubuntu2 tar_1.30+dfsg-6 tzdata_2019c-3 ubuntu-keyring_2018.09.18.1 util-linux_2.34-0.1ubuntu2 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1ubuntu3 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Tue Sep 10 08:30:05 2019 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./fitgcp_0.0.20150429-3.dsc dpkg-source: info: extracting fitgcp in fitgcp-0.0.20150429 dpkg-source: info: unpacking fitgcp_0.0.20150429.orig.tar.xz dpkg-source: info: unpacking fitgcp_0.0.20150429-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 2to3.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-17965469 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-17965469 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-17965469 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package fitgcp dpkg-buildpackage: info: source version 0.0.20150429-3 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 fakeroot debian/rules clean dh clean --with python3 dh_clean debian/rules build-arch dh build-arch --with python3 dh_update_autotools_config -a dh_autoreconf -a create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch --with python3 dh_testroot -a dh_prep -a dh_install -a dh_installdocs -a dh_installchangelogs -a dh_installman -a dh_python3 -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a debian/rules override_dh_fixperms make[1]: Entering directory '/<>' dh_fixperms find debian -name "*.py" -exec chmod 755 \{\} \; make[1]: Leaving directory '/<>' dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dpkg-gencontrol: warning: Depends field of package fitgcp: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums -a dh_builddeb -a INFO: pkgstriptranslations version 144 pkgstriptranslations: processing fitgcp (in debian/fitgcp); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/fitgcp/DEBIAN/control, package fitgcp, directory debian/fitgcp pkgstripfiles: Running PNG optimization (using 4 cpus) for package fitgcp ... pkgstripfiles: No PNG files. dpkg-deb: building package 'fitgcp' in '../fitgcp_0.0.20150429-3_arm64.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../fitgcp_0.0.20150429-3_arm64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20191025-2109 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ fitgcp_0.0.20150429-3_arm64.changes: ------------------------------------ Format: 1.8 Date: Tue, 10 Sep 2019 08:58:14 +0200 Source: fitgcp Binary: fitgcp Architecture: arm64 Version: 0.0.20150429-3 Distribution: focal-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Andreas Tille Description: fitgcp - fitting genome coverage distributions with mixture models Closes: 936518 Changes: fitgcp (0.0.20150429-3) unstable; urgency=medium . * Use 2to3 to port to Python3 Closes: #936518 * debhelper-compat 12 * Standards-Version: 4.4.0 * Secure URI in copyright format Checksums-Sha1: b2a0deb4178fe94f6b7df8da6784a14a20f87bce 6439 fitgcp_0.0.20150429-3_arm64.buildinfo df20214403f1fad142e552783bb8fdfa4b68dfe1 12652 fitgcp_0.0.20150429-3_arm64.deb Checksums-Sha256: 5bd1fba25c278b7a5e94fea642ea359605c0ace640d95a347cb44287218a2672 6439 fitgcp_0.0.20150429-3_arm64.buildinfo 6e35fc34935ad1a9db01a9b8f75368991b9efefb0ba176fa2eb28ab38e5d4b3a 12652 fitgcp_0.0.20150429-3_arm64.deb Files: 9ecfb88d0ccac5fa9e184c0017ac9817 6439 science optional fitgcp_0.0.20150429-3_arm64.buildinfo 4ace995c60d68e9a0a340be1f18f38b2 12652 science optional fitgcp_0.0.20150429-3_arm64.deb +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ fitgcp_0.0.20150429-3_arm64.deb ------------------------------- new debian package, version 2.0. size 12652 bytes: control archive=1560 bytes. 1381 bytes, 26 lines control 410 bytes, 6 lines md5sums 272 bytes, 12 lines * postinst #!/bin/sh 387 bytes, 12 lines * prerm #!/bin/sh Package: fitgcp Version: 0.0.20150429-3 Architecture: arm64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 49 Depends: python3:any, python3-scipy, python3-numpy, python3-pysam Section: science Priority: optional Homepage: http://sourceforge.net/projects/fitgcp/ Description: fitting genome coverage distributions with mixture models Genome coverage, the number of sequencing reads mapped to a position in a genome, is an insightful indicator of irregularities within sequencing experiments. While the average genome coverage is frequently used within algorithms in computational genomics, the complete information available in coverage profiles (i.e. histograms over all coverages) is currently not exploited to its full extent. Thus, biases such as fragmented or erroneous reference genomes often remain unaccounted for. Making this information accessible can improve the quality of sequencing experiments and quantitative analyses. . fitGCP is a framework for fitting mixtures of probability distributions to genome coverage profiles. Besides commonly used distributions, fitGCP uses distributions tailored to account for common artifacts. The mixture models are iteratively fitted based on the Expectation-Maximization algorithm. drwxr-xr-x root/root 0 2019-09-10 06:58 ./ drwxr-xr-x root/root 0 2019-09-10 06:58 ./usr/ drwxr-xr-x root/root 0 2019-09-10 06:58 ./usr/bin/ lrwxrwxrwx root/root 0 2019-09-10 06:58 ./usr/bin/fitgcp -> ../share/fitgcp/fitGCP.py drwxr-xr-x root/root 0 2019-09-10 06:58 ./usr/share/ drwxr-xr-x root/root 0 2019-09-10 06:58 ./usr/share/doc/ drwxr-xr-x root/root 0 2019-09-10 06:58 ./usr/share/doc/fitgcp/ -rw-r--r-- root/root 3813 2019-09-10 06:58 ./usr/share/doc/fitgcp/README.txt -rw-r--r-- root/root 764 2019-09-10 06:58 ./usr/share/doc/fitgcp/changelog.Debian.gz -rw-r--r-- root/root 1833 2019-09-10 06:58 ./usr/share/doc/fitgcp/copyright drwxr-xr-x root/root 0 2019-09-10 06:58 ./usr/share/fitgcp/ -rwxr-xr-x root/root 24485 2019-09-10 06:58 ./usr/share/fitgcp/fitGCP.py drwxr-xr-x root/root 0 2019-09-10 06:58 ./usr/share/man/ drwxr-xr-x root/root 0 2019-09-10 06:58 ./usr/share/man/man1/ -rw-r--r-- root/root 1159 2019-09-10 06:58 ./usr/share/man/man1/fitgcp.1.gz drwxr-xr-x root/root 0 2019-09-10 06:58 ./usr/share/python3/ drwxr-xr-x root/root 0 2019-09-10 06:58 ./usr/share/python3/runtime.d/ -rwxr-xr-x root/root 129 2019-09-10 06:58 ./usr/share/python3/runtime.d/fitgcp.rtupdate +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build-Space: 352 Build-Time: 8 Distribution: focal-proposed Host Architecture: arm64 Install-Time: 26 Job: fitgcp_0.0.20150429-3.dsc Machine Architecture: arm64 Package: fitgcp Package-Time: 37 Source-Version: 0.0.20150429-3 Space: 352 Status: successful Version: 0.0.20150429-3 -------------------------------------------------------------------------------- Finished at 20191025-2109 Build needed 00:00:37, 352k disc space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=focal --arch=arm64 PACKAGEBUILD-17965469 Scanning for processes to kill in build PACKAGEBUILD-17965469