RUN: /usr/share/launchpad-buildd/slavebin/slave-prep ['slave-prep'] Forking launchpad-buildd slave process... Kernel version: Linux bos01-arm64-041 4.4.0-89-generic #112-Ubuntu SMP Mon Jul 31 19:40:11 UTC 2017 aarch64 Buildd toolchain package versions: launchpad-buildd_147 python-lpbuildd_147 sbuild_0.67.0-2ubuntu7 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3 git-build-recipe_0.3.4~git201611291343.dcee459~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.1 dpkg-dev_1.18.4ubuntu1.2 python-debian_0.1.27ubuntu2 qemu-user-static_1:2.5+dfsg-5ubuntu10.14. Syncing the system clock with the buildd NTP service... 4 Aug 20:32:05 ntpdate[1795]: adjust time server 10.211.37.1 offset -0.013713 sec RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', 'PACKAGEBUILD-13199385', '/home/buildd/filecache-default/42e17d2fa25e748a1aa6eaeef2fe6722beaed5a9'] Unpacking chroot for build PACKAGEBUILD-13199385 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', 'PACKAGEBUILD-13199385'] Mounting chroot for build PACKAGEBUILD-13199385 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', 'PACKAGEBUILD-13199385', 'deb http://ftpmaster.internal/ubuntu artful main universe', 'deb http://ftpmaster.internal/ubuntu artful-security main universe', 'deb http://ftpmaster.internal/ubuntu artful-updates main universe', 'deb http://ftpmaster.internal/ubuntu artful-proposed main universe'] Overriding sources.list in build-PACKAGEBUILD-13199385 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', 'PACKAGEBUILD-13199385', 'armhf'] Updating debian chroot for build PACKAGEBUILD-13199385 Get:1 http://ftpmaster.internal/ubuntu artful InRelease [237 kB] Get:2 http://ftpmaster.internal/ubuntu artful-security InRelease [65.5 kB] Get:3 http://ftpmaster.internal/ubuntu artful-updates InRelease [65.5 kB] Get:4 http://ftpmaster.internal/ubuntu artful-proposed InRelease [235 kB] Get:5 http://ftpmaster.internal/ubuntu artful/main armhf Packages [1103 kB] Get:6 http://ftpmaster.internal/ubuntu artful/main Translation-en [559 kB] Get:7 http://ftpmaster.internal/ubuntu artful/universe armhf Packages [8024 kB] Get:8 http://ftpmaster.internal/ubuntu artful/universe Translation-en [4777 kB] Get:9 http://ftpmaster.internal/ubuntu artful-proposed/main armhf Packages [152 kB] Get:10 http://ftpmaster.internal/ubuntu artful-proposed/main Translation-en [96.4 kB] Get:11 http://ftpmaster.internal/ubuntu artful-proposed/universe armhf Packages [550 kB] Get:12 http://ftpmaster.internal/ubuntu artful-proposed/universe Translation-en [344 kB] Fetched 16.2 MB in 8s (1853 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: g++-6 libperl5.24 libstdc++-6-dev perl-modules-5.24 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: cpp-7 g++-7 gcc-7 gcc-7-base libasan4 libcilkrts5 libgcc-7-dev libperl5.26 libstdc++-7-dev perl-modules-5.26 The following packages will be upgraded: advancecomp apt apt-transport-https base-files bash binutils bsdutils ca-certificates cpp cpp-6 debconf debianutils dmsetup dpkg dpkg-dev findutils g++ g++-6 gcc gcc-6 gcc-6-base grep init init-system-helpers libapparmor1 libapt-pkg5.0 libasan3 libasn1-8-heimdal libatomic1 libaudit-common libaudit1 libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcc1-0 libdb5.3 libdevmapper1.02.1 libdpkg-perl libfdisk1 libgcc-6-dev libgcc1 libgcrypt20 libgnutls30 libgomp1 libgpg-error0 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libidn2-0 libip4tc0 libk5crypto3 libkmod2 libkrb5-26-heimdal libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common liblzma5 libmount1 libnpth0 libp11-kit0 libpcre3 libperl5.24 libpng16-16 libpsl5 libroken18-heimdal libselinux1 libsemanage-common libsemanage1 libsmartcols1 libsqlite3-0 libssl1.0.0 libstdc++-6-dev libstdc++6 libsystemd0 libtasn1-6 libubsan0 libudev1 libusb-0.1-4 libuuid1 libwind0-heimdal linux-libc-dev login mount multiarch-support openssl passwd perl perl-base perl-modules-5.24 sensible-utils systemd systemd-sysv tar tzdata util-linux xz-utils 103 upgraded, 10 newly installed, 0 to remove and 0 not upgraded. Need to get 150 MB of archives. After this operation, 423 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu artful/main armhf debconf all 1.5.63 [136 kB] Get:2 http://ftpmaster.internal/ubuntu artful-proposed/main armhf perl armhf 5.26.0-5 [205 kB] Get:3 http://ftpmaster.internal/ubuntu artful-proposed/main armhf perl-modules-5.26 all 5.26.0-5 [2762 kB] Get:4 http://ftpmaster.internal/ubuntu artful/main armhf libperl5.24 armhf 5.24.1-7ubuntu1 [2794 kB] Get:5 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libperl5.26 armhf 5.26.0-5 [2860 kB] Get:6 http://ftpmaster.internal/ubuntu artful-proposed/main armhf perl-base armhf 5.26.0-5 [1280 kB] Get:7 http://ftpmaster.internal/ubuntu artful/main armhf perl-modules-5.24 all 5.24.1-7ubuntu1 [2664 kB] Get:8 http://ftpmaster.internal/ubuntu artful/main armhf libc6-dev armhf 2.24-12ubuntu1 [1810 kB] Get:9 http://ftpmaster.internal/ubuntu artful/main armhf libc-dev-bin armhf 2.24-12ubuntu1 [59.4 kB] Get:10 http://ftpmaster.internal/ubuntu artful-proposed/main armhf linux-libc-dev armhf 4.11.0-13.19 [910 kB] Get:11 http://ftpmaster.internal/ubuntu artful-proposed/main armhf gcc-7-base armhf 7.1.0-12ubuntu1 [18.3 kB] Get:12 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libgcc1 armhf 1:7.1.0-12ubuntu1 [38.5 kB] Get:13 http://ftpmaster.internal/ubuntu artful/main armhf libc6 armhf 2.24-12ubuntu1 [2143 kB] Get:14 http://ftpmaster.internal/ubuntu artful/main armhf libdb5.3 armhf 5.3.28-13 [589 kB] Get:15 http://ftpmaster.internal/ubuntu artful-proposed/main armhf init-system-helpers all 1.49 [37.0 kB] Get:16 http://ftpmaster.internal/ubuntu artful/main armhf base-files armhf 9.6ubuntu101 [59.1 kB] Get:17 http://ftpmaster.internal/ubuntu artful/main armhf sensible-utils all 0.0.9+nmu1 [10.2 kB] Get:18 http://ftpmaster.internal/ubuntu artful/main armhf debianutils armhf 4.8.1.1 [84.3 kB] Get:19 http://ftpmaster.internal/ubuntu artful/main armhf bash armhf 4.4-5ubuntu1 [527 kB] Get:20 http://ftpmaster.internal/ubuntu artful-proposed/main armhf bsdutils armhf 1:2.30.1-0ubuntu2 [55.2 kB] Get:21 http://ftpmaster.internal/ubuntu artful/main armhf tar armhf 1.29b-2 [209 kB] Get:22 http://ftpmaster.internal/ubuntu artful/main armhf dpkg armhf 1.18.24ubuntu1 [1099 kB] Get:23 http://ftpmaster.internal/ubuntu artful/main armhf findutils armhf 4.6.0+git+20170606-3 [277 kB] Get:24 http://ftpmaster.internal/ubuntu artful/main armhf grep armhf 3.1-2 [145 kB] Get:25 http://ftpmaster.internal/ubuntu artful/main armhf login armhf 1:4.2-3.2ubuntu2 [301 kB] Get:26 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libuuid1 armhf 2.30.1-0ubuntu2 [14.0 kB] Get:27 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libblkid1 armhf 2.30.1-0ubuntu2 [105 kB] Get:28 http://ftpmaster.internal/ubuntu artful/main armhf libpcre3 armhf 2:8.39-4 [208 kB] Get:29 http://ftpmaster.internal/ubuntu artful/main armhf libselinux1 armhf 2.6-3build1 [59.4 kB] Get:30 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libmount1 armhf 2.30.1-0ubuntu2 [117 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armhf libp11-kit0 armhf 0.23.7-3 [163 kB] Get:41 http://ftpmaster.internal/ubuntu artful/main armhf libtasn1-6 armhf 4.12-2.1 [30.7 kB] Get:42 http://ftpmaster.internal/ubuntu artful/main armhf libgnutls30 armhf 3.5.8-6ubuntu1 [617 kB] Get:43 http://ftpmaster.internal/ubuntu artful/main armhf apt armhf 1.5~beta1 [1067 kB] Get:44 http://ftpmaster.internal/ubuntu artful/main armhf libip4tc0 armhf 1.6.1-2ubuntu1 [17.9 kB] Get:45 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libapparmor1 armhf 2.11.0-2ubuntu12 [25.1 kB] Get:46 http://ftpmaster.internal/ubuntu artful/main armhf libaudit-common all 1:2.7.7-1ubuntu1 [4118 B] Get:47 http://ftpmaster.internal/ubuntu artful/main armhf libcap-ng0 armhf 0.7.7-3build1 [9794 B] Get:48 http://ftpmaster.internal/ubuntu artful/main armhf libaudit1 armhf 1:2.7.7-1ubuntu1 [35.1 kB] Get:49 http://ftpmaster.internal/ubuntu artful/main armhf libgpg-error0 armhf 1.27-3 [32.0 kB] Get:50 http://ftpmaster.internal/ubuntu artful/main armhf libgcrypt20 armhf 1.7.8-2 [344 kB] Get:51 http://ftpmaster.internal/ubuntu artful/main armhf libkmod2 armhf 24-1ubuntu1 [34.8 kB] Get:52 http://ftpmaster.internal/ubuntu artful-proposed/main armhf systemd armhf 234-2ubuntu2 [2642 kB] Get:53 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libsystemd0 armhf 234-2ubuntu2 [195 kB] Get:54 http://ftpmaster.internal/ubuntu artful-proposed/main armhf init armhf 1.49 [6040 B] Get:55 http://ftpmaster.internal/ubuntu artful-proposed/main armhf systemd-sysv armhf 234-2ubuntu2 [13.7 kB] Get:56 http://ftpmaster.internal/ubuntu artful/main armhf libsemanage-common all 2.6-2build1 [6738 B] Get:57 http://ftpmaster.internal/ubuntu artful/main armhf libsemanage1 armhf 2.6-2build1 [71.1 kB] Get:58 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libudev1 armhf 234-2ubuntu2 [50.9 kB] Get:59 http://ftpmaster.internal/ubuntu artful/main armhf passwd armhf 1:4.2-3.2ubuntu2 [747 kB] Get:60 http://ftpmaster.internal/ubuntu artful/main armhf libdevmapper1.02.1 armhf 2:1.02.137-2ubuntu2 [125 kB] Get:61 http://ftpmaster.internal/ubuntu artful/main armhf dmsetup armhf 2:1.02.137-2ubuntu2 [71.2 kB] Get:62 http://ftpmaster.internal/ubuntu artful/main armhf libroken18-heimdal armhf 7.4.0.dfsg.1-2 [33.9 kB] Get:63 http://ftpmaster.internal/ubuntu artful/main armhf libasn1-8-heimdal armhf 7.4.0.dfsg.1-2 [138 kB] Get:64 http://ftpmaster.internal/ubuntu artful/main armhf libheimbase1-heimdal armhf 7.4.0.dfsg.1-2 [24.0 kB] Get:65 http://ftpmaster.internal/ubuntu artful/main armhf libhcrypto4-heimdal armhf 7.4.0.dfsg.1-2 [77.4 kB] Get:66 http://ftpmaster.internal/ubuntu artful/main armhf libwind0-heimdal armhf 7.4.0.dfsg.1-2 [46.9 kB] Get:67 http://ftpmaster.internal/ubuntu artful/main armhf libhx509-5-heimdal armhf 7.4.0.dfsg.1-2 [88.3 kB] Get:68 http://ftpmaster.internal/ubuntu artful/main armhf libsqlite3-0 armhf 3.19.3-3 [416 kB] Get:69 http://ftpmaster.internal/ubuntu artful/main armhf libkrb5-26-heimdal armhf 7.4.0.dfsg.1-2 [168 kB] Get:70 http://ftpmaster.internal/ubuntu artful/main armhf libheimntlm0-heimdal armhf 7.4.0.dfsg.1-2 [13.3 kB] Get:71 http://ftpmaster.internal/ubuntu artful/main armhf libgssapi3-heimdal armhf 7.4.0.dfsg.1-2 [79.5 kB] Get:72 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libldap-2.4-2 armhf 2.4.45+dfsg-1ubuntu1 [132 kB] Get:73 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libldap-common all 2.4.45+dfsg-1ubuntu1 [16.6 kB] Get:74 http://ftpmaster.internal/ubuntu artful/main armhf libnpth0 armhf 1.5-2 [6582 B] Get:75 http://ftpmaster.internal/ubuntu artful/main armhf libssl1.0.0 armhf 1.0.2g-1ubuntu13 [711 kB] Get:76 http://ftpmaster.internal/ubuntu artful/main armhf multiarch-support armhf 2.24-12ubuntu1 [6836 B] Get:77 http://ftpmaster.internal/ubuntu artful/main armhf tzdata all 2017b-2 [203 kB] Get:78 http://ftpmaster.internal/ubuntu artful-proposed/main armhf xz-utils armhf 5.2.2-1.3 [82.0 kB] Get:79 http://ftpmaster.internal/ubuntu artful/main armhf openssl armhf 1.0.2g-1ubuntu13 [485 kB] Get:80 http://ftpmaster.internal/ubuntu artful/main armhf ca-certificates all 20161130+nmu1 [186 kB] Get:81 http://ftpmaster.internal/ubuntu artful/main armhf libgssapi-krb5-2 armhf 1.15.1-2 [98.7 kB] Get:82 http://ftpmaster.internal/ubuntu artful/main armhf libkrb5-3 armhf 1.15.1-2 [231 kB] Get:83 http://ftpmaster.internal/ubuntu artful/main armhf libkrb5support0 armhf 1.15.1-2 [28.4 kB] Get:84 http://ftpmaster.internal/ubuntu artful/main armhf libk5crypto3 armhf 1.15.1-2 [83.3 kB] Get:85 http://ftpmaster.internal/ubuntu artful/main armhf libidn2-0 armhf 2.0.2-1 [86.6 kB] Get:86 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libpng16-16 armhf 1.6.31-1~exp1 [158 kB] Get:87 http://ftpmaster.internal/ubuntu artful/main armhf libpsl5 armhf 0.17.0-5 [39.4 kB] Get:88 http://ftpmaster.internal/ubuntu artful/main armhf advancecomp armhf 2.0-1 [167 kB] Get:89 http://ftpmaster.internal/ubuntu artful-proposed/main armhf binutils armhf 2.29-3ubuntu1 [2657 kB] Get:90 http://ftpmaster.internal/ubuntu artful-proposed/main armhf cpp-7 armhf 7.1.0-12ubuntu1 [29.4 MB] Get:91 http://ftpmaster.internal/ubuntu artful-proposed/main armhf cpp armhf 4:7.1.0-1ubuntu1 [27.6 kB] Get:92 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libgomp1 armhf 7.1.0-12ubuntu1 [64.3 kB] Get:93 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libubsan0 armhf 7.1.0-12ubuntu1 [105 kB] Get:94 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libatomic1 armhf 7.1.0-12ubuntu1 [6258 B] Get:95 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libasan3 armhf 6.4.0-2ubuntu1 [292 kB] Get:96 http://ftpmaster.internal/ubuntu artful-proposed/main armhf g++-6 armhf 6.4.0-2ubuntu1 [5923 kB] Get:97 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libstdc++-6-dev armhf 6.4.0-2ubuntu1 [1480 kB] Get:98 http://ftpmaster.internal/ubuntu artful-proposed/main armhf gcc-6 armhf 6.4.0-2ubuntu1 [5803 kB] Get:99 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libgcc-6-dev armhf 6.4.0-2ubuntu1 [550 kB] Get:100 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libcc1-0 armhf 7.1.0-12ubuntu1 [31.5 kB] Get:101 http://ftpmaster.internal/ubuntu artful-proposed/main armhf cpp-6 armhf 6.4.0-2ubuntu1 [5200 kB] Get:102 http://ftpmaster.internal/ubuntu artful-proposed/main armhf gcc-6-base armhf 6.4.0-2ubuntu1 [17.4 kB] Get:103 http://ftpmaster.internal/ubuntu artful/main armhf dpkg-dev all 1.18.24ubuntu1 [608 kB] Get:104 http://ftpmaster.internal/ubuntu artful/main armhf libdpkg-perl all 1.18.24ubuntu1 [209 kB] Get:105 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libasan4 armhf 7.1.0-12ubuntu1 [308 kB] Get:106 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libcilkrts5 armhf 7.1.0-12ubuntu1 [36.1 kB] Get:107 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libgcc-7-dev armhf 7.1.0-12ubuntu1 [682 kB] Get:108 http://ftpmaster.internal/ubuntu artful-proposed/main armhf gcc-7 armhf 7.1.0-12ubuntu1 [28.9 MB] Get:109 http://ftpmaster.internal/ubuntu artful-proposed/main armhf gcc armhf 4:7.1.0-1ubuntu1 [5290 B] Get:110 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libstdc++-7-dev armhf 7.1.0-12ubuntu1 [1512 kB] Get:111 http://ftpmaster.internal/ubuntu artful-proposed/universe armhf g++-7 armhf 7.1.0-12ubuntu1 [31.7 MB] Get:112 http://ftpmaster.internal/ubuntu artful-proposed/main armhf g++ armhf 4:7.1.0-1ubuntu1 [1490 B] Get:113 http://ftpmaster.internal/ubuntu artful/main armhf libusb-0.1-4 armhf 2:0.1.12-31 [15.6 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 150 MB in 26s (5651 kB/s) (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 14052 files and directories currently installed.) Preparing to unpack .../mount_2.30.1-0ubuntu2_armhf.deb ... Unpacking mount (2.30.1-0ubuntu2) over (2.29-1ubuntu2) ... Setting up mount (2.30.1-0ubuntu2) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 14054 files and directories currently installed.) Preparing to unpack .../libtasn1-6_4.12-2.1_armhf.deb ... Unpacking libtasn1-6:armhf (4.12-2.1) over (4.10-1) ... Setting up libtasn1-6:armhf (4.12-2.1) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 14054 files and directories currently installed.) Preparing to unpack .../apt_1.5~beta1_armhf.deb ... Unpacking apt (1.5~beta1) over (1.4.1ubuntu2) ... Setting up apt (1.5~beta1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 14053 files and directories currently installed.) Preparing to unpack .../libip4tc0_1.6.1-2ubuntu1_armhf.deb ... Unpacking libip4tc0:armhf (1.6.1-2ubuntu1) over (1.6.0-3ubuntu2) ... Preparing to unpack .../libapparmor1_2.11.0-2ubuntu12_armhf.deb ... Unpacking libapparmor1:armhf (2.11.0-2ubuntu12) over (2.11.0-2ubuntu4) ... Preparing to unpack .../libaudit-common_1%3a2.7.7-1ubuntu1_all.deb ... Unpacking libaudit-common (1:2.7.7-1ubuntu1) over (1:2.6.6-1ubuntu1) ... Setting up libaudit-common (1:2.7.7-1ubuntu1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 14053 files and directories currently installed.) Preparing to unpack .../libcap-ng0_0.7.7-3build1_armhf.deb ... Unpacking libcap-ng0:armhf (0.7.7-3build1) over (0.7.7-3) ... Setting up libcap-ng0:armhf (0.7.7-3build1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 14053 files and directories currently installed.) Preparing to unpack .../libaudit1_1%3a2.7.7-1ubuntu1_armhf.deb ... Unpacking libaudit1:armhf (1:2.7.7-1ubuntu1) over (1:2.6.6-1ubuntu1) ... Setting up libaudit1:armhf (1:2.7.7-1ubuntu1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 14053 files and directories currently installed.) Preparing to unpack .../libgpg-error0_1.27-3_armhf.deb ... Unpacking libgpg-error0:armhf (1.27-3) over (1.26-2) ... Setting up libgpg-error0:armhf (1.27-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 14053 files and directories currently installed.) Preparing to unpack .../libgcrypt20_1.7.8-2_armhf.deb ... Unpacking libgcrypt20:armhf (1.7.8-2) over (1.7.6-1) ... Setting up libgcrypt20:armhf (1.7.8-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 14053 files and directories currently installed.) Preparing to unpack .../libkmod2_24-1ubuntu1_armhf.deb ... Unpacking libkmod2:armhf (24-1ubuntu1) over (22-1.1ubuntu1) ... Preparing to unpack .../systemd_234-2ubuntu2_armhf.deb ... Unpacking systemd (234-2ubuntu2) over (232-21ubuntu3) ... dpkg: warning: unable to delete old directory '/etc/dbus-1/system.d': Directory not empty dpkg: warning: unable to delete old directory '/etc/dbus-1': Directory not empty Preparing to unpack .../libsystemd0_234-2ubuntu2_armhf.deb ... Unpacking libsystemd0:armhf (234-2ubuntu2) over (232-21ubuntu3) ... Setting up libsystemd0:armhf (234-2ubuntu2) ... (Reading database ... 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Installing new version of config file /etc/systemd/resolved.conf ... Created symlink /etc/systemd/system/dbus-org.freedesktop.resolve1.service -> /lib/systemd/system/systemd-resolved.service. Created symlink /etc/systemd/system/multi-user.target.wants/systemd-resolved.service -> /lib/systemd/system/systemd-resolved.service. addgroup: The group `systemd-journal' already exists as a system group. Exiting. Removing obsolete conffile /etc/dbus-1/system.d/org.freedesktop.hostname1.conf ... Removing obsolete conffile /etc/dbus-1/system.d/org.freedesktop.locale1.conf ... Removing obsolete conffile /etc/dbus-1/system.d/org.freedesktop.login1.conf ... Removing obsolete conffile /etc/dbus-1/system.d/org.freedesktop.network1.conf ... Removing obsolete conffile /etc/dbus-1/system.d/org.freedesktop.resolve1.conf ... Removing obsolete conffile /etc/dbus-1/system.d/org.freedesktop.systemd1.conf ... Removing obsolete conffile /etc/dbus-1/system.d/org.freedesktop.timedate1.conf ... 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Unpacking libstdc++-7-dev:armhf (7.1.0-12ubuntu1) ... Selecting previously unselected package g++-7. Preparing to unpack .../51-g++-7_7.1.0-12ubuntu1_armhf.deb ... Unpacking g++-7 (7.1.0-12ubuntu1) ... Preparing to unpack .../52-g++_4%3a7.1.0-1ubuntu1_armhf.deb ... Unpacking g++ (4:7.1.0-1ubuntu1) over (4:6.3.0-2ubuntu1) ... Preparing to unpack .../53-libusb-0.1-4_2%3a0.1.12-31_armhf.deb ... Unpacking libusb-0.1-4:armhf (2:0.1.12-31) over (2:0.1.12-30) ... Setting up libnpth0:armhf (1.5-2) ... Setting up libgomp1:armhf (7.1.0-12ubuntu1) ... Setting up libatomic1:armhf (7.1.0-12ubuntu1) ... Setting up perl-modules-5.24 (5.24.1-7ubuntu1) ... Setting up libperl5.24:armhf (5.24.1-7ubuntu1) ... Setting up libcc1-0:armhf (7.1.0-12ubuntu1) ... Setting up apt-transport-https (1.5~beta1) ... Setting up libidn2-0:armhf (2.0.2-1) ... Setting up libssl1.0.0:armhf (1.0.2g-1ubuntu13) ... Setting up libasan4:armhf (7.1.0-12ubuntu1) ... Setting up libpng16-16:armhf (1.6.31-1~exp1) ... Setting up libldap-common (2.4.45+dfsg-1ubuntu1) ... Setting up libcilkrts5:armhf (7.1.0-12ubuntu1) ... Setting up libpsl5:armhf (0.17.0-5) ... Setting up multiarch-support (2.24-12ubuntu1) ... Setting up tzdata (2017b-2) ... Current default time zone: 'Etc/UTC' Local time is now: Fri Aug 4 20:34:15 UTC 2017. Universal Time is now: Fri Aug 4 20:34:15 UTC 2017. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up systemd-sysv (234-2ubuntu2) ... Setting up libubsan0:armhf (7.1.0-12ubuntu1) ... Setting up gcc-6-base:armhf (6.4.0-2ubuntu1) ... Setting up linux-libc-dev:armhf (4.11.0-13.19) ... Setting up advancecomp (2.0-1) ... Setting up libroken18-heimdal:armhf (7.4.0.dfsg.1-2) ... Setting up libdevmapper1.02.1:armhf (2:1.02.137-2ubuntu2) ... Setting up perl-modules-5.26 (5.26.0-5) ... Setting up libkrb5support0:armhf (1.15.1-2) ... Setting up libgcc-7-dev:armhf (7.1.0-12ubuntu1) ... Setting up cpp-7 (7.1.0-12ubuntu1) ... Processing triggers for libc-bin (2.24-12ubuntu1) ... Setting up libperl5.26:armhf (5.26.0-5) ... Setting up xz-utils (5.2.2-1.3) ... Setting up libheimbase1-heimdal:armhf (7.4.0.dfsg.1-2) ... Setting up openssl (1.0.2g-1ubuntu13) ... Setting up libsqlite3-0:armhf (3.19.3-3) ... Setting up dmsetup (2:1.02.137-2ubuntu2) ... Setting up binutils (2.29-3ubuntu1) ... Setting up cpp-6 (6.4.0-2ubuntu1) ... Setting up libc-dev-bin (2.24-12ubuntu1) ... Setting up ca-certificates (20161130+nmu1) ... Updating certificates in /etc/ssl/certs... 0 added, 7 removed; done. Setting up libc6-dev:armhf (2.24-12ubuntu1) ... Setting up libusb-0.1-4:armhf (2:0.1.12-31) ... Setting up cpp (4:7.1.0-1ubuntu1) ... Setting up libk5crypto3:armhf (1.15.1-2) ... Setting up libasan3:armhf (6.4.0-2ubuntu1) ... Setting up libgcc-6-dev:armhf (6.4.0-2ubuntu1) ... Setting up libstdc++-6-dev:armhf (6.4.0-2ubuntu1) ... Setting up libwind0-heimdal:armhf (7.4.0.dfsg.1-2) ... Setting up gcc-7 (7.1.0-12ubuntu1) ... Setting up init (1.49) ... Setting up libasn1-8-heimdal:armhf (7.4.0.dfsg.1-2) ... Setting up libhcrypto4-heimdal:armhf (7.4.0.dfsg.1-2) ... Setting up gcc (4:7.1.0-1ubuntu1) ... Setting up libhx509-5-heimdal:armhf (7.4.0.dfsg.1-2) ... Setting up gcc-6 (6.4.0-2ubuntu1) ... Setting up g++-6 (6.4.0-2ubuntu1) ... Setting up libstdc++-7-dev:armhf (7.1.0-12ubuntu1) ... Setting up perl (5.26.0-5) ... Removing obsolete conffile /etc/perl/sitecustomize.pl ... Setting up libkrb5-3:armhf (1.15.1-2) ... Setting up libkrb5-26-heimdal:armhf (7.4.0.dfsg.1-2) ... Setting up libheimntlm0-heimdal:armhf (7.4.0.dfsg.1-2) ... Setting up g++-7 (7.1.0-12ubuntu1) ... Setting up libdpkg-perl (1.18.24ubuntu1) ... Setting up libgssapi-krb5-2:armhf (1.15.1-2) ... Setting up dpkg-dev (1.18.24ubuntu1) ... Setting up g++ (4:7.1.0-1ubuntu1) ... Setting up libgssapi3-heimdal:armhf (7.4.0.dfsg.1-2) ... Setting up libldap-2.4-2:armhf (2.4.45+dfsg-1ubuntu1) ... Processing triggers for libc-bin (2.24-12ubuntu1) ... Processing triggers for ca-certificates (20161130+nmu1) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', 'PACKAGEBUILD-13199385', 'armhf', 'artful-proposed', '-c', 'chroot:autobuild', '--arch=armhf', '--dist=artful-proposed', '--purge=never', '--nolog', 'freecontact_1.0.21-5build1.dsc'] Initiating build PACKAGEBUILD-13199385 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-89-generic #112-Ubuntu SMP Mon Jul 31 19:40:11 UTC 2017 armv7l sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on bos01-arm64-041.buildd +==============================================================================+ | freecontact 1.0.21-5build1 (armhf) 04 Aug 2017 20:34 | +==============================================================================+ Package: freecontact Version: 1.0.21-5build1 Source Version: 1.0.21-5build1 Distribution: artful-proposed Machine Architecture: arm64 Host Architecture: armhf Build Architecture: armhf I: NOTICE: Log filtering will replace 'build/freecontact-yHAIRc/freecontact-1.0.21' with '<>' I: NOTICE: Log filtering will replace 'build/freecontact-yHAIRc' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-13199385/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- freecontact_1.0.21-5build1.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-PKnypz/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-PKnypz/apt_archive ./ InRelease Get:2 copy:/<>/resolver-PKnypz/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-PKnypz/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-PKnypz/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-PKnypz/apt_archive ./ Packages [525 B] Fetched 2858 B in 0s (59.7 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: g++-6 libperl5.24 libstdc++-6-dev perl-modules-5.24 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 780 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-PKnypz/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [780 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 780 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 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Merged Build-Depends: debhelper (>= 9.0.0), automake, autotools-dev, bash-completion, dh-autoreconf, d-shlibs, dpkg-dev (>= 1.16.2), gfortran, libblas-dev | libblas-3.so, libboost-dev, libboost-program-options-dev, liblapack-dev | liblapack-3.so, libtool, libxerces-c-dev, perl, xsdcxx (>= 3.3) Filtered Build-Depends: debhelper (>= 9.0.0), automake, autotools-dev, bash-completion, dh-autoreconf, d-shlibs, dpkg-dev (>= 1.16.2), gfortran, libblas-dev | libblas-3.so, libboost-dev, libboost-program-options-dev, liblapack-dev | liblapack-3.so, libtool, libxerces-c-dev, perl, xsdcxx (>= 3.3) dpkg-deb: building package 'sbuild-build-depends-freecontact-dummy' in '/<>/resolver-z4NLlK/apt_archive/sbuild-build-depends-freecontact-dummy.deb'. Ign:1 copy:/<>/resolver-z4NLlK/apt_archive ./ InRelease Get:2 copy:/<>/resolver-z4NLlK/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-z4NLlK/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-z4NLlK/apt_archive ./ Sources [337 B] Get:5 copy:/<>/resolver-z4NLlK/apt_archive ./ Packages [656 B] Fetched 3112 B in 0s (63.5 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install freecontact build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: g++-6 libperl5.24 perl-modules-5.24 Use 'sudo apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bash-completion bsdmainutils d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism file gettext gettext-base gfortran gfortran-7 groff-base icu-devtools intltool-debian libarchive-zip-perl libblas-common libblas-dev libblas3 libboost-dev libboost-program-options-dev libboost-program-options1.62-dev libboost-program-options1.62.0 libboost1.62-dev libbsd0 libcroco3 libfile-stripnondeterminism-perl libgfortran-7-dev libgfortran4 libglib2.0-0 libicu-dev libicu57 liblapack-dev liblapack3 libmagic-mgc libmagic1 libpipeline1 libsigsegv2 libtimedate-perl libtool libxerces-c-dev libxerces-c3.1 libxml2 m4 man-db po-debconf xsdcxx Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev gfortran-multilib gfortran-doc gfortran-7-multilib gfortran-7-doc libgfortran4-dbg libcoarrays-dev groff liblapack-doc libboost-doc libboost1.62-doc libboost-atomic1.62-dev libboost-chrono1.62-dev libboost-context1.62-dev libboost-coroutine1.62-dev libboost-date-time1.62-dev libboost-exception1.62-dev libboost-fiber1.62-dev libboost-filesystem1.62-dev libboost-graph1.62-dev libboost-graph-parallel1.62-dev libboost-iostreams1.62-dev libboost-locale1.62-dev libboost-log1.62-dev libboost-math1.62-dev libboost-mpi1.62-dev libboost-mpi-python1.62-dev libboost-python1.62-dev libboost-random1.62-dev libboost-regex1.62-dev libboost-serialization1.62-dev libboost-signals1.62-dev libboost-system1.62-dev libboost-test1.62-dev libboost-thread1.62-dev libboost-timer1.62-dev libboost-type-erasure1.62-dev libboost-wave1.62-dev libboost1.62-tools-dev libmpfrc++-dev libntl-dev icu-doc libtool-doc gcj-jdk libxerces-c-doc m4-doc less www-browser libmail-box-perl Recommended packages: curl | wget | lynx-cur libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev xml-core libmail-sendmail-perl The following packages will be REMOVED: pkg-create-dbgsym* The following NEW packages will be installed: autoconf automake autopoint autotools-dev bash-completion bsdmainutils d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism file gettext gettext-base gfortran gfortran-7 groff-base icu-devtools intltool-debian libarchive-zip-perl libblas-common libblas-dev libblas3 libboost-dev libboost-program-options-dev libboost-program-options1.62-dev libboost-program-options1.62.0 libboost1.62-dev libbsd0 libcroco3 libfile-stripnondeterminism-perl libgfortran-7-dev libgfortran4 libglib2.0-0 libicu-dev libicu57 liblapack-dev liblapack3 libmagic-mgc libmagic1 libpipeline1 libsigsegv2 libtimedate-perl libtool libxerces-c-dev libxerces-c3.1 libxml2 m4 man-db po-debconf sbuild-build-depends-freecontact-dummy xsdcxx 0 upgraded, 51 newly installed, 1 to remove and 0 not upgraded. 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http://ftpmaster.internal/ubuntu artful/universe armhf libxerces-c-dev armhf 3.1.4+debian-2 [1518 kB] Get:51 http://ftpmaster.internal/ubuntu artful/universe armhf xsdcxx armhf 4.0.0-6 [1729 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 76.7 MB in 6s (11.3 MB/s) (Reading database ... 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Setting up d-shlibs (0.81) ... Setting up gettext-base (0.19.8.1-2ubuntu1) ... Setting up libpipeline1:armhf (1.4.2-1) ... Setting up m4 (1.4.18-1) ... Setting up libicu57:armhf (57.1-6) ... Setting up libbsd0:armhf (0.8.6-1) ... Setting up libxml2:armhf (2.9.4+dfsg1-3build2) ... Setting up libmagic-mgc (1:5.30-1) ... Setting up libmagic1:armhf (1:5.30-1) ... Setting up libcroco3:armhf (0.6.12-1) ... Setting up libblas3 (3.7.1-1ubuntu1) ... update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode Processing triggers for libc-bin (2.24-12ubuntu1) ... Setting up autotools-dev (20161112.1) ... Setting up libgfortran-7-dev:armhf (7.1.0-12ubuntu1) ... Setting up gfortran-7 (7.1.0-12ubuntu1) ... Setting up icu-devtools (57.1-6) ... Setting up libboost-dev:armhf (1.62.0.1) ... Setting up bsdmainutils (9.0.12+nmu1ubuntu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up autopoint (0.19.8.1-2ubuntu1) ... Setting up libboost-program-options-dev:armhf (1.62.0.1) ... Setting up libfile-stripnondeterminism-perl (0.038-1) ... Setting up gfortran (4:7.1.0-1ubuntu1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libxerces-c3.1:armhf (3.1.4+debian-2) ... Setting up gettext (0.19.8.1-2ubuntu1) ... Setting up libblas-dev (3.7.1-1ubuntu1) ... update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode Setting up liblapack3 (3.7.1-1ubuntu1) ... update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode Setting up autoconf (2.69-10) ... Setting up libicu-dev (57.1-6) ... Setting up file (1:5.30-1) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up automake (1:1.15-6ubuntu1) ... update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode Setting up man-db (2.7.6.1-2) ... Not building database; man-db/auto-update is not 'true'. Setting up xsdcxx (4.0.0-6) ... Setting up liblapack-dev (3.7.1-1ubuntu1) ... update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode Setting up libtool (2.4.6-2) ... Setting up libxerces-c-dev (3.1.4+debian-2) ... Setting up po-debconf (1.0.20) ... Setting up dh-autoreconf (14) ... Setting up dh-strip-nondeterminism (0.038-1) ... Setting up debhelper (10.6.4ubuntu1) ... Setting up sbuild-build-depends-freecontact-dummy (0.invalid.0) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 32185 files and directories currently installed.) Purging configuration files for pkg-create-dbgsym (0.73) ... Processing triggers for libc-bin (2.24-12ubuntu1) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-89-generic arm64 (armv7l) Toolchain package versions: binutils_2.29-3ubuntu1 dpkg-dev_1.18.24ubuntu1 g++-6_6.4.0-2ubuntu1 g++-7_7.1.0-12ubuntu1 gcc-6_6.4.0-2ubuntu1 gcc-7_7.1.0-12ubuntu1 libc6-dev_2.24-12ubuntu1 libstdc++-6-dev_6.4.0-2ubuntu1 libstdc++-7-dev_7.1.0-12ubuntu1 libstdc++6_7.1.0-12ubuntu1 linux-libc-dev_4.11.0-13.19 Package versions: adduser_3.113+nmu3ubuntu5 advancecomp_2.0-1 apt_1.5~beta1 apt-transport-https_1.5~beta1 autoconf_2.69-10 automake_1:1.15-6ubuntu1 autopoint_0.19.8.1-2ubuntu1 autotools-dev_20161112.1 base-files_9.6ubuntu101 base-passwd_3.5.43 bash_4.4-5ubuntu1 bash-completion_1:2.1-4.3ubuntu1 binutils_2.29-3ubuntu1 bsdmainutils_9.0.12+nmu1ubuntu1 bsdutils_1:2.30.1-0ubuntu2 build-essential_12.1ubuntu2 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libcurl3-gnutls_7.52.1-5ubuntu1 libdb5.3_5.3.28-13 libdebconfclient0_0.213ubuntu1 libdevmapper1.02.1_2:1.02.137-2ubuntu2 libdpkg-perl_1.18.24ubuntu1 libfakeroot_1.21-1ubuntu2 libfdisk1_2.30.1-0ubuntu2 libffi6_3.2.1-6 libfile-stripnondeterminism-perl_0.038-1 libgcc-6-dev_6.4.0-2ubuntu1 libgcc-7-dev_7.1.0-12ubuntu1 libgcc1_1:7.1.0-12ubuntu1 libgcrypt20_1.7.8-2 libgdbm3_1.8.3-14 libgfortran-7-dev_7.1.0-12ubuntu1 libgfortran4_7.1.0-12ubuntu1 libglib2.0-0_2.53.4-3 libgmp10_2:6.1.2+dfsg-1 libgnutls30_3.5.8-6ubuntu1 libgomp1_7.1.0-12ubuntu1 libgpg-error0_1.27-3 libgssapi-krb5-2_1.15.1-2 libgssapi3-heimdal_7.4.0.dfsg.1-2 libhcrypto4-heimdal_7.4.0.dfsg.1-2 libheimbase1-heimdal_7.4.0.dfsg.1-2 libheimntlm0-heimdal_7.4.0.dfsg.1-2 libhogweed4_3.3-1 libhx509-5-heimdal_7.4.0.dfsg.1-2 libicu-dev_57.1-6 libicu57_57.1-6 libidn11_1.33-1 libidn2-0_2.0.2-1 libip4tc0_1.6.1-2ubuntu1 libisl15_0.18-1 libk5crypto3_1.15.1-2 libkeyutils1_1.5.9-9ubuntu1 libkmod2_24-1ubuntu1 libkrb5-26-heimdal_7.4.0.dfsg.1-2 libkrb5-3_1.15.1-2 libkrb5support0_1.15.1-2 libksba8_1.3.5-2 liblapack-dev_3.7.1-1ubuntu1 liblapack3_3.7.1-1ubuntu1 libldap-2.4-2_2.4.45+dfsg-1ubuntu1 libldap-common_2.4.45+dfsg-1ubuntu1 liblockfile-bin_1.14-1 liblockfile1_1.14-1 liblz4-1_0.0~r131-2ubuntu2 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.30-1 libmagic1_1:5.30-1 libmount1_2.30.1-0ubuntu2 libmpc3_1.0.3-1 libmpfr4_3.1.5-1 libncurses5_6.0+20160625-1ubuntu1 libncursesw5_6.0+20160625-1ubuntu1 libnettle6_3.3-1 libnpth0_1.5-2 libp11-kit0_0.23.7-3 libpam-modules_1.1.8-3.2ubuntu3 libpam-modules-bin_1.1.8-3.2ubuntu3 libpam-runtime_1.1.8-3.2ubuntu3 libpam0g_1.1.8-3.2ubuntu3 libpcre3_2:8.39-4 libperl5.24_5.24.1-7ubuntu1 libperl5.26_5.26.0-5 libpipeline1_1.4.2-1 libpng16-16_1.6.31-1~exp1 libprocps6_2:3.3.12-1ubuntu2 libpsl5_0.17.0-5 libreadline7_7.0-0ubuntu2 libroken18-heimdal_7.4.0.dfsg.1-2 librtmp1_2.4+20151223.gitfa8646d.1-1 libsasl2-2_2.1.27~101-g0780600+dfsg-2ubuntu1 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-2ubuntu1 libseccomp2_2.3.1-2.1ubuntu1 libselinux1_2.6-3build1 libsemanage-common_2.6-2build1 libsemanage1_2.6-2build1 libsepol1_2.6-2 libsigsegv2_2.11-1 libslang2_2.3.1-5ubuntu1 libsmartcols1_2.30.1-0ubuntu2 libsqlite3-0_3.19.3-3 libss2_1.43.4-2 libssl1.0.0_1.0.2g-1ubuntu13 libstdc++-6-dev_6.4.0-2ubuntu1 libstdc++-7-dev_7.1.0-12ubuntu1 libstdc++6_7.1.0-12ubuntu1 libsystemd0_234-2ubuntu2 libtasn1-6_4.12-2.1 libtimedate-perl_2.3000-2 libtinfo5_6.0+20160625-1ubuntu1 libtool_2.4.6-2 libubsan0_7.1.0-12ubuntu1 libudev1_234-2ubuntu2 libunistring0_0.9.3-5.2ubuntu1 libusb-0.1-4_2:0.1.12-31 libustr-1.0-1_1.0.4-6 libuuid1_2.30.1-0ubuntu2 libwind0-heimdal_7.4.0.dfsg.1-2 libxerces-c-dev_3.1.4+debian-2 libxerces-c3.1_3.1.4+debian-2 libxml2_2.9.4+dfsg1-3build2 linux-libc-dev_4.11.0-13.19 lockfile-progs_0.1.17build1 login_1:4.2-3.2ubuntu2 lsb-base_9.20160110ubuntu5 m4_1.4.18-1 make_4.1-9.1 man-db_2.7.6.1-2 mawk_1.3.3-17ubuntu2 mount_2.30.1-0ubuntu2 multiarch-support_2.24-12ubuntu1 ncurses-base_6.0+20160625-1ubuntu1 ncurses-bin_6.0+20160625-1ubuntu1 openssl_1.0.2g-1ubuntu13 optipng_0.7.6-1build1 passwd_1:4.2-3.2ubuntu2 patch_2.7.5-1build1 perl_5.26.0-5 perl-base_5.26.0-5 perl-modules-5.24_5.24.1-7ubuntu1 perl-modules-5.26_5.26.0-5 pinentry-curses_1.0.0-2 pkgbinarymangler_131 po-debconf_1.0.20 policyrcd-script-zg2_0.1-3 procps_2:3.3.12-1ubuntu2 readline-common_7.0-0ubuntu2 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-freecontact-dummy_0.invalid.0 sed_4.4-1 sensible-utils_0.0.9+nmu1 systemd_234-2ubuntu2 systemd-sysv_234-2ubuntu2 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.88dsf-59.8git1 tar_1.29b-2 tzdata_2017b-2 ubuntu-keyring_2016.10.27 util-linux_2.30.1-0ubuntu2 xsdcxx_4.0.0-6 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-0ubuntu1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Fri Aug 4 20:05:54 2017 UTC gpgv: using RSA key gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./freecontact_1.0.21-5build1.dsc dpkg-source: info: extracting freecontact in freecontact-1.0.21 dpkg-source: info: unpacking freecontact_1.0.21.orig.tar.xz dpkg-source: info: unpacking freecontact_1.0.21-5build1.debian.tar.xz Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/home/buildd LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd MAIL=/var/mail/buildd OLDPWD=/ PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games PWD=/<> SHELL=/bin/sh SUDO_COMMAND=/usr/sbin/chroot /<> su buildd -s /bin/sh -c cd '/<>' && 'env' SUDO_GID=2501 SUDO_UID=2001 SUDO_USER=buildd TERM=unknown USER=buildd USERNAME=root dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package freecontact dpkg-buildpackage: info: source version 1.0.21-5build1 dpkg-buildpackage: info: source distribution artful dpkg-source --before-build freecontact-1.0.21 dpkg-buildpackage: info: host architecture armhf dpkg-source: info: using options from freecontact-1.0.21/debian/source/options: --single-debian-patch --extend-diff-ignore=(^|/)(config.guess|config.sub|INSTALL)$ fakeroot debian/rules clean dh clean --parallel --with bash-completion --with autoreconf dh_testdir -O--parallel debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' rm -f build-indep-stamp dh_auto_clean make[1]: Leaving directory '/<>' dh_autoreconf_clean -O--parallel dh_clean -O--parallel debian/rules build-arch dh build-arch --parallel --with bash-completion --with autoreconf dh_testdir -a -O--parallel dh_update_autotools_config -a -O--parallel dh_autoreconf -a -O--parallel libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:29: installing './compile' configure.ac:22: installing './missing' lib/Makefile.am: installing './depcomp' debian/rules override_dh_auto_configure-arch make[1]: Entering directory '/<>' dh_auto_configure -- --with-boost-libdir=/usr/lib/arm-linux-gnueabihf ./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --libexecdir=\${prefix}/lib/arm-linux-gnueabihf --disable-maintainer-mode --disable-dependency-tracking --with-boost-libdir=/usr/lib/arm-linux-gnueabihf configure: WARNING: unrecognized options: --disable-maintainer-mode checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for g++... g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking for style of include used by make... GNU checking dependency style of g++... none checking for g77... no checking for xlf... no checking for f77... f77 checking whether we are using the GNU Fortran 77 compiler... yes checking whether f77 accepts -g... yes checking for gfortran... gfortran checking whether we are using the GNU Fortran compiler... yes checking whether gfortran accepts -g... yes checking build system type... arm-unknown-linux-gnueabihf checking host system type... arm-unknown-linux-gnueabihf checking how to get verbose linking output from gfortran... -v checking for Fortran libraries of gfortran... -L/usr/lib/gcc/arm-linux-gnueabihf/7 -L/usr/lib/gcc/arm-linux-gnueabihf/7/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/7/../../../../lib -L/lib/arm-linux-gnueabihf -L/lib/../lib -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/../lib -L/usr/lib/gcc/arm-linux-gnueabihf/7/../../.. -lgfortran -lm checking how to print strings... printf checking for gcc... gcc checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... none checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for f77 option to produce PIC... -fPIC checking if f77 PIC flag -fPIC works... yes checking if f77 static flag -static works... yes checking if f77 supports -c -o file.o... yes checking if f77 supports -c -o file.o... (cached) yes checking whether the f77 linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate configure: -O3 enables: -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -flra-remat -fmove-loop-invariants -fomit-frame-pointer -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -freorder-blocks -freorder-functions -frerun-cse-after-loop -fsched-pressure -fschedule-insns -fschedule-insns2 -fsection-anchors -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fstrict-overflow -fthread-jumps -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funswitch-loops checking for boostlib >= 1.20.0... yes checking whether the Boost::Program_Options library is available... yes checking for exit in -lboost_program_options... yes checking whether HAVE_BOOST_PROGRAM_OPTIONS is declared... yes checking for OpenMP flag of C++ compiler... -fopenmp checking how to get verbose linking output from f77... -v checking for Fortran 77 libraries of f77... -L/usr/lib/gcc/arm-linux-gnueabihf/7 -L/usr/lib/gcc/arm-linux-gnueabihf/7/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/7/../../../../lib -L/lib/arm-linux-gnueabihf -L/lib/../lib -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/../lib -L/usr/lib/gcc/arm-linux-gnueabihf/7/../../.. -lgfortran -lm checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking if sgemm_ is being linked in already... no checking for sgemm_ in -lopenblas... no checking for ATL_xerbla in -latlas... no checking for sgemm_ in -lblas... yes checking for dgemm_ in -ldgemm... no checking for sgemm_ in -lmkl... no checking for sgemm_ in -framework vecLib... no checking for sgemm_ in -lcxml... no checking for sgemm_ in -ldxml... no checking for sgemm_ in -lscs... no checking for sgemm_ in -lcomplib.sgimath... no checking for sgemm_ in -lblas... (cached) yes checking for sgemm_ in -lessl... no checking for sgemm_ in -lblas... (cached) yes checking for cheev_... no checking for cheev_ in -llapack... yes checking for the pthreads library -lpthreads... no checking whether pthreads work without any flags... no checking whether pthreads work with -Kthread... no checking whether pthreads work with -kthread... no checking for the pthreads library -llthread... no checking whether pthreads work with -pthread... yes checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE checking if more special flags are required for pthreads... no checking for PTHREAD_PRIO_INHERIT... yes checking for Xerces C++ Parser headers in /usr/include and /usr/include/xercesc... found checking for Xerces C++ Parser libraries... found checking for Xerces C++ Parser... yes checking for xsdcxx... xsdcxx checking for x86 cpuid output... unknown checking for doxygen... no configure: WARNING: doxygen not found - will not generate any doxygen documentation checking for perl... /usr/bin/perl checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating lib/Doxyfile config.status: creating lib/Makefile config.status: creating src/Makefile config.status: creating lib/config.h config.status: executing depfiles commands config.status: executing libtool commands configure: WARNING: unrecognized options: --disable-maintainer-mode make[1]: Leaving directory '/<>' dh_auto_build -a -O--parallel make -j4 make[1]: Entering directory '/<>' Making all in lib make[2]: Entering directory '/<>/lib' make all-am make[3]: Entering directory '/<>/lib' /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wall -fvisibility=hidden -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -flra-remat -fmove-loop-invariants -fomit-frame-pointer -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -freorder-blocks -freorder-functions -frerun-cse-after-loop -fsched-pressure -fschedule-insns -fschedule-insns2 -fsection-anchors -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fstrict-overflow -fthread-jumps -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funswitch-loops -ffast-math -funroll-loops -ftree-vectorizer-verbose=0 -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libfreecontact_la-freecontact.lo `test -f 'freecontact.cpp' || echo './'`freecontact.cpp /bin/bash ../libtool --tag=FC --mode=compile gfortran -fvisibility=hidden -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -flra-remat -fmove-loop-invariants -fomit-frame-pointer -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -freorder-blocks -freorder-functions -frerun-cse-after-loop -fsched-pressure -fschedule-insns -fschedule-insns2 -fsection-anchors -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fstrict-overflow -fthread-jumps -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funswitch-loops -ffast-math -funroll-loops -ftree-vectorizer-verbose=0 -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c -o libfreecontact_la-glassofast-real.lo `test -f 'glassofast-real.f90' || echo './'`glassofast-real.f90 libtool: compile: gfortran -fvisibility=hidden -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -flra-remat -fmove-loop-invariants -fomit-frame-pointer -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -freorder-blocks -freorder-functions -frerun-cse-after-loop -fsched-pressure -fschedule-insns -fschedule-insns2 -fsection-anchors -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fstrict-overflow -fthread-jumps -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funswitch-loops -ffast-math -funroll-loops -ftree-vectorizer-verbose=0 -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c glassofast-real.f90 -fPIC -o .libs/libfreecontact_la-glassofast-real.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wall -fvisibility=hidden -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -flra-remat -fmove-loop-invariants -fomit-frame-pointer -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -freorder-blocks -freorder-functions -frerun-cse-after-loop -fsched-pressure -fschedule-insns -fschedule-insns2 -fsection-anchors -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fstrict-overflow -fthread-jumps -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funswitch-loops -ffast-math -funroll-loops -ftree-vectorizer-verbose=0 -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c freecontact.cpp -fPIC -DPIC -o .libs/libfreecontact_la-freecontact.o libtool: compile: gfortran -fvisibility=hidden -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -flra-remat -fmove-loop-invariants -fomit-frame-pointer -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -freorder-blocks -freorder-functions -frerun-cse-after-loop -fsched-pressure -fschedule-insns -fschedule-insns2 -fsection-anchors -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fstrict-overflow -fthread-jumps -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funswitch-loops -ffast-math -funroll-loops -ftree-vectorizer-verbose=0 -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c glassofast-real.f90 -o libfreecontact_la-glassofast-real.o >/dev/null 2>&1 In file included from freecontact.cpp:32:0: freecontact.h:69:54: warning: ignoring attributes on template argument ‘freecontact::__m128i {aka __vector(2) long long int}’ [-Wignored-attributes] class LIBFREEC_API ali_t : public std::vector<__m128i> ^ In file included from freecontact.cpp:32:0: freecontact.h:113:56: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] ali_t& push(const std::vector& __al) throw (alilen_error); ^~~~~ freecontact.h:116:50: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] inline ali_t& push(const std::string& __l) throw (alilen_error) ^~~~~ In file included from freecontact.cpp:32:0: freecontact.h: In constructor ‘freecontact::ali_t::ali_t(uint16_t)’: freecontact.h:80:79: warning: ignoring attributes on template argument ‘freecontact::__m128i {aka __vector(2) long long int}’ [-Wignored-attributes] ali_t( const uint16_t __alilen = 0 ) : std::vector<__m128i>(), seqcnt(0), alilen(__alilen), alilen16(( alilen-1 )/16 + 1), alilenpad( 16 * alilen16 ) ^ In file included from freecontact.cpp:32:0: freecontact.h: At global scope: freecontact.h:185:23: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error); ^~~~~ freecontact.h:219:23: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error); ^~~~~ freecontact.h:227:23: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error); ^~~~~ freecontact.h:234:23: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error) ^~~~~ freecontact.cpp: In destructor ‘virtual freecontact::_glasso_timer::~_glasso_timer()’: freecontact.cpp:232:83: warning: throw will always call terminate() [-Wterminate] if (timer_delete(_timerid) == -1) throw std::runtime_error(strerror(errno)); ^ freecontact.cpp:232:83: note: in C++11 destructors default to noexcept freecontact.cpp: At global scope: freecontact.cpp:240:23: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error) ^~~~~ freecontact.cpp: In member function ‘void freecontact::predictor::get_seq_weights(freecontact::predictor::freq_vec_t&, double&, const freecontact::ali_t&, double, bool, int)’: freecontact.cpp:265:17: warning: unused variable ‘cache_holds_nseq’ [-Wunused-variable] uint32_t cache_holds_nseq = _cache_holds_nseq(__ali.alilenpad); ^~~~~~~~~~~~~~~~ freecontact.cpp: At global scope: freecontact.cpp:439:23: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error) ^~~~~ freecontact.cpp: In member function ‘freecontact::predictor::cont_res_t freecontact::predictor::run(const freecontact::ali_t&, const freq_vec_t&, double, double, double, uint16_t, double, double, bool, double, bool, bool, double, int, time_t, freecontact::predictor::time_res_t*)’: freecontact.cpp:545:9: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] if(__timing) (*__timing)["pairfreq"] = t_diff.tv_sec+t_diff.tv_usec/1e6; if(dbg) fprintf(stderr, "calculated pair frequency table in %g secs\n", t_diff.tv_sec+t_diff.tv_usec/1e6 ); } ^~ freecontact.cpp:545:82: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ if(__timing) (*__timing)["pairfreq"] = t_diff.tv_sec+t_diff.tv_usec/1e6; if(dbg) fprintf(stderr, "calculated pair frequency table in %g secs\n", t_diff.tv_sec+t_diff.tv_usec/1e6 ); } ^~ freecontact.cpp:690:13: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] if(__timing) (*__timing)["shrink"] = t_diff.tv_sec+t_diff.tv_usec/1e6; if(dbg) fprintf(stderr, "\nshrank covariance matrix in %g secs\n", t_diff.tv_sec+t_diff.tv_usec/1e6 ); } ^~ freecontact.cpp:690:84: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ if(__timing) (*__timing)["shrink"] = t_diff.tv_sec+t_diff.tv_usec/1e6; if(dbg) fprintf(stderr, "\nshrank covariance matrix in %g secs\n", t_diff.tv_sec+t_diff.tv_usec/1e6 ); } ^~ freecontact.cpp: At global scope: freecontact.cpp:976:23: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error) ^~~~~ freecontact.cpp: In member function ‘freecontact::predictor::cont_res_t freecontact::predictor::run(const freecontact::ali_t&, double, double, double, uint16_t, double, double, bool, double, bool, bool, double, bool, int, time_t, freecontact::predictor::time_res_t*)’: freecontact.cpp:995:9: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] if(__timing) (*__timing)["all"] = t_diff.tv_sec+t_diff.tv_usec/1e6; if(dbg) fprintf(stderr, "all done in %g secs\n", t_diff.tv_sec+t_diff.tv_usec/1e6); } ^~ freecontact.cpp:995:77: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ if(__timing) (*__timing)["all"] = t_diff.tv_sec+t_diff.tv_usec/1e6; if(dbg) fprintf(stderr, "all done in %g secs\n", t_diff.tv_sec+t_diff.tv_usec/1e6); } ^~ freecontact.cpp: At global scope: freecontact.cpp:1001:63: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] ali_t& ali_t::push(const std::vector& __al) throw (alilen_error) ^~~~~ In file included from /usr/include/c++/7/vector:69:0, from /usr/include/boost/format.hpp:17, from freecontact.cpp:22: /usr/include/c++/7/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = __vector(2) long long int; _Alloc = std::allocator<__vector(2) long long int>]’: /usr/include/c++/7/bits/vector.tcc:458:5: note: parameter passing for argument of type ‘std::vector<__vector(2) long long int>::iterator {aka __gnu_cxx::__normal_iterator<__vector(2) long long int*, std::vector<__vector(2) long long int> >}’ changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/7/map:60:0, from freecontact.h:21, from freecontact.cpp:32: /usr/include/c++/7/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, double>; _KeyOfValue = std::_Select1st, double> >; _Compare = std::less >; _Alloc = std::allocator, double> >]’: /usr/include/c++/7/bits/stl_tree.h:2130:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator {aka std::_Rb_tree_const_iterator, double> >}’ changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/7/vector:64:0, from /usr/include/boost/format.hpp:17, from freecontact.cpp:22: /usr/include/c++/7/bits/stl_vector.h: In member function ‘freecontact::ali_t& freecontact::ali_t::push(const std::vector&)’: /usr/include/c++/7/bits/stl_vector.h:712:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<__vector(2) long long int*, std::vector<__vector(2) long long int> >’ changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wall -fvisibility=hidden -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -flra-remat -fmove-loop-invariants -fomit-frame-pointer -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -freorder-blocks -freorder-functions -frerun-cse-after-loop -fsched-pressure -fschedule-insns -fschedule-insns2 -fsection-anchors -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fstrict-overflow -fthread-jumps -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funswitch-loops -ffast-math -funroll-loops -ftree-vectorizer-verbose=0 -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c freecontact.cpp -o libfreecontact_la-freecontact.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=link g++ -fopenmp -Wall -fvisibility=hidden -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -flra-remat -fmove-loop-invariants -fomit-frame-pointer -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -freorder-blocks -freorder-functions -frerun-cse-after-loop -fsched-pressure -fschedule-insns -fschedule-insns2 -fsection-anchors -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fstrict-overflow -fthread-jumps -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funswitch-loops -ffast-math -funroll-loops -ftree-vectorizer-verbose=0 -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -pthread -version-info 0:0:0 -Wl,-Bsymbolic-functions -Wl,-z,relro -o libfreecontact.la -rpath /usr/lib/arm-linux-gnueabihf libfreecontact_la-freecontact.lo libfreecontact_la-glassofast-real.lo -lrt -L/usr/lib/gcc/arm-linux-gnueabihf/7 -L/usr/lib/gcc/arm-linux-gnueabihf/7/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/7/../../../../lib -L/lib/arm-linux-gnueabihf -L/lib/../lib -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/../lib -L/usr/lib/gcc/arm-linux-gnueabihf/7/../../.. -lgfortran -lm -lblas -llapack libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/7/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/7/crtbeginS.o .libs/libfreecontact_la-freecontact.o .libs/libfreecontact_la-glassofast-real.o -lrt -L/usr/lib/gcc/arm-linux-gnueabihf/7 -L/usr/lib/gcc/arm-linux-gnueabihf/7/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/7/../../../../lib -L/lib/arm-linux-gnueabihf -L/lib/../lib -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/../lib -L/usr/lib/gcc/arm-linux-gnueabihf/7/../../.. -lgfortran -lblas -llapack -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/7/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/7/../../../arm-linux-gnueabihf/crtn.o -fopenmp -pthread -g -O2 -fstack-protector-strong -pthread -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -fopenmp -pthread -Wl,-soname -Wl,libfreecontact.so.0 -o .libs/libfreecontact.so.0.0.0 libtool: link: (cd ".libs" && rm -f "libfreecontact.so.0" && ln -s "libfreecontact.so.0.0.0" "libfreecontact.so.0") libtool: link: (cd ".libs" && rm -f "libfreecontact.so" && ln -s "libfreecontact.so.0.0.0" "libfreecontact.so") libtool: link: ar cru .libs/libfreecontact.a libfreecontact_la-freecontact.o libfreecontact_la-glassofast-real.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libfreecontact.a libtool: link: ( cd ".libs" && rm -f "libfreecontact.la" && ln -s "../libfreecontact.la" "libfreecontact.la" ) make[3]: Leaving directory '/<>/lib' make[2]: Leaving directory '/<>/lib' Making all in src make[2]: Entering directory '/<>/src' g++ -DHAVE_CONFIG_H -I. -I../lib -I../lib -I../src -I/usr/include -I/usr/include/xercesc -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o freecontact-freecontact.o `test -f 'freecontact.cpp' || echo './'`freecontact.cpp xsdcxx cxx-tree --location-map http://bioxsd.org/BioXSD-1.1.xsd=BioXSD-1.1.xsd \ --namespace-map http://rostlab.org/freecontact/input=freecontact_input_xsd \ --namespace-map http://rostlab.org/freecontact/output=freecontact_output_xsd \ --namespace-map http://bioxsd.org/BioXSD-1.1=BioXSD \ --generate-serialization --generate-doxygen \ --generate-polymorphic --polymorphic-type-all \ --omit-default-attributes \ --root-element-all \ --hxx-suffix _xsd.hxx --cxx-suffix _xsd.cxx \ BioXSD-1.1.xsd sed -e 's|__pkgdatadir__|/usr/share/freecontact|g;s|__examplesdir__|/usr/share/doc/freecontact/examples|g;s|__sysconfdir__|/etc|g;s|__bindir__|/usr/bin|g;s|__PACKAGE_VERSION__|1.0.21|g' "freecontact.cpp" | \ pod2man --utf8 -c 'User Commands' -r "1.0.21" -name FREECONTACT > "freecontact.1" xsdcxx cxx-tree --location-map http://bioxsd.org/BioXSD-1.1.xsd=BioXSD-1.1.xsd \ --namespace-map http://rostlab.org/freecontact/input=freecontact_input_xsd \ --namespace-map http://rostlab.org/freecontact/output=freecontact_output_xsd \ --namespace-map http://bioxsd.org/BioXSD-1.1=BioXSD \ --generate-serialization --generate-doxygen \ --generate-polymorphic --polymorphic-type-all \ --omit-default-attributes \ --root-element-all \ --hxx-suffix _xsd.hxx --cxx-suffix _xsd.cxx \ freecontact_input.xsd xsdcxx cxx-tree --location-map http://bioxsd.org/BioXSD-1.1.xsd=BioXSD-1.1.xsd \ --namespace-map http://rostlab.org/freecontact/input=freecontact_input_xsd \ --namespace-map http://rostlab.org/freecontact/output=freecontact_output_xsd \ --namespace-map http://bioxsd.org/BioXSD-1.1=BioXSD \ --generate-serialization --generate-doxygen \ --generate-polymorphic --polymorphic-type-all \ --omit-default-attributes \ --root-element-all \ --hxx-suffix _xsd.hxx --cxx-suffix _xsd.cxx \ freecontact_output.xsd g++ -DHAVE_CONFIG_H -I. -I../lib -I../lib -I../src -I/usr/include -I/usr/include/xercesc -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o freecontact-BioXSD-1.1_xsd.o `test -f 'BioXSD-1.1_xsd.cxx' || echo './'`BioXSD-1.1_xsd.cxx g++ -DHAVE_CONFIG_H -I. -I../lib -I../lib -I../src -I/usr/include -I/usr/include/xercesc -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o freecontact-freecontact_output_xsd.o `test -f 'freecontact_output_xsd.cxx' || echo './'`freecontact_output_xsd.cxx g++ -DHAVE_CONFIG_H -I. -I../lib -I../lib -I../src -I/usr/include -I/usr/include/xercesc -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o freecontact-_write_bioxsd.o `test -f '_write_bioxsd.cpp' || echo './'`_write_bioxsd.cpp In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:1507:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequence (::std::auto_ptr< sequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:1585:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] species (::std::auto_ptr< species_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:1665:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reference (::std::auto_ptr< reference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:1741:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:1817:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:1893:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] translationData (::std::auto_ptr< translationData_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:1969:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] inlineBaseQuality (::std::auto_ptr< inlineBaseQuality_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:1992:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] BiosequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:2105:45: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] GeneralNucleotideSequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:2186:44: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] GeneralAminoacidSequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:2267:38: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] NucleotideSequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:2348:37: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] AminoacidSequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:2611:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:3051:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:3109:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] len (::std::auto_ptr< len_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:3287:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] min (::std::auto_ptr< min_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:3366:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] max (::std::auto_ptr< max_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:3442:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:3500:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] minCertainty (::std::auto_ptr< minCertainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:3567:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] maxCertainty (::std::auto_ptr< maxCertainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:3877:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:3935:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] bases (::std::auto_ptr< bases_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:4110:36: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localAlignmentPosition (::std::auto_ptr< localAlignmentPosition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:4186:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceRecord (::std::auto_ptr< sequenceRecord_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:4262:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceReference (::std::auto_ptr< sequenceReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:4338:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceName (::std::auto_ptr< sequenceName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:4414:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] species (::std::auto_ptr< species_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:4490:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] genomeBuild (::std::auto_ptr< genomeBuild_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:4566:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] chromosome (::std::auto_ptr< chromosome_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:4644:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:4720:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantAccession (::std::auto_ptr< variantAccession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:4796:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantNote (::std::auto_ptr< variantNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:5064:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reversedDirection (::std::auto_ptr< reversedDirection_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:5589:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:5798:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] className (::std::auto_ptr< className_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:5938:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] properties (::std::auto_ptr< properties_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:6115:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] specificFeatureName (::std::auto_ptr< specificFeatureName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:6385:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:6627:36: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] appliesToWholeSequence (::std::auto_ptr< appliesToWholeSequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:6703:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] position (::std::auto_ptr< position_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:6843:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] occurrenceName (::std::auto_ptr< occurrenceName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:6919:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] occurrenceNote (::std::auto_ptr< occurrenceNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:6995:32: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] featureTypeDetails (::std::auto_ptr< featureTypeDetails_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:7203:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] frame (::std::auto_ptr< frame_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:7279:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] phase (::std::auto_ptr< phase_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:7419:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignment (::std::auto_ptr< alignment_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:7588:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] referenceSequence (::std::auto_ptr< referenceSequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:7742:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] FeatureRecord (::std::auto_ptr< referenceSequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:7901:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] predicted (::std::auto_ptr< predicted_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:7977:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] experimental (::std::auto_ptr< experimental_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:8130:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:8217:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] MethodResult (::std::auto_ptr< method_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:8357:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] methodIdRef (::std::auto_ptr< methodIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:8444:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] Result (::std::auto_ptr< methodIdRef_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:8602:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:8678:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] methodIdRef (::std::auto_ptr< methodIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:8818:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] verdict (::std::auto_ptr< verdict_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:8973:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dataReference (::std::auto_ptr< dataReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:9113:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] verdict (::std::auto_ptr< verdict_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:9189:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reliability (::std::auto_ptr< reliability_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:9212:34: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ExperimentalEvidence (::std::auto_ptr< dataReference_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:9566:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:9642:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] index (::std::auto_ptr< index_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:9718:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] unit (::std::auto_ptr< unit_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:9794:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:9974:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] position (::std::auto_ptr< position_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:10032:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] value (::std::auto_ptr< value_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:10108:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:10285:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:10361:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:10419:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:10679:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:10755:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:10813:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:11072:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:11148:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:11206:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:11465:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] min (::std::auto_ptr< min_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:11544:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] max (::std::auto_ptr< max_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:11620:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:11678:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] minCertainty (::std::auto_ptr< minCertainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:11745:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] maxCertainty (::std::auto_ptr< maxCertainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:12003:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] max (::std::auto_ptr< max_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:12061:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:12377:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] insertion (::std::auto_ptr< insertion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:12517:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] nextPoint (::std::auto_ptr< nextPoint_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:12593:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] nextPartition (::std::auto_ptr< nextPartition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:12669:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] samePoint (::std::auto_ptr< samePoint_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:12745:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] samePartition (::std::auto_ptr< samePartition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:12821:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] outside (::std::auto_ptr< outside_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:1507:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequence (::std::auto_ptr< sequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:1585:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] species (::std::auto_ptr< species_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:1665:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reference (::std::auto_ptr< reference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:1741:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:1817:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:1893:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] translationData (::std::auto_ptr< translationData_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:1969:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] inlineBaseQuality (::std::auto_ptr< inlineBaseQuality_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:1992:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] BiosequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:2105:45: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] GeneralNucleotideSequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:2186:44: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] GeneralAminoacidSequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:2267:38: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] NucleotideSequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:2348:37: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] AminoacidSequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:2611:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:3051:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:3109:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] len (::std::auto_ptr< len_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:3287:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] min (::std::auto_ptr< min_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:3366:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] max (::std::auto_ptr< max_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:3442:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:3500:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] minCertainty (::std::auto_ptr< minCertainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:3567:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] maxCertainty (::std::auto_ptr< maxCertainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:3877:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:3935:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] bases (::std::auto_ptr< bases_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:4110:36: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localAlignmentPosition (::std::auto_ptr< localAlignmentPosition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:13071:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] correspondance (::std::auto_ptr< correspondance_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:4186:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceRecord (::std::auto_ptr< sequenceRecord_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:4262:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceReference (::std::auto_ptr< sequenceReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:4338:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceName (::std::auto_ptr< sequenceName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:4414:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] species (::std::auto_ptr< species_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:4490:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] genomeBuild (::std::auto_ptr< genomeBuild_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:4566:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] chromosome (::std::auto_ptr< chromosome_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:4644:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:4720:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantAccession (::std::auto_ptr< variantAccession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:4796:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantNote (::std::auto_ptr< variantNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:13211:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] insertion (::std::auto_ptr< insertion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:13351:39: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] explicitSequenceReference (::std::auto_ptr< explicitSequenceReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:5064:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reversedDirection (::std::auto_ptr< reversedDirection_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:13597:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reference (::std::auto_ptr< reference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:5589:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:5798:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] className (::std::auto_ptr< className_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:13832:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] geneticCode (::std::auto_ptr< geneticCode_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:5938:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] properties (::std::auto_ptr< properties_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:13908:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] phase (::std::auto_ptr< phase_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:13984:42: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reversedTranslationDirection (::std::auto_ptr< reversedTranslationDirection_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:6115:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] specificFeatureName (::std::auto_ptr< specificFeatureName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:6385:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:6627:36: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] appliesToWholeSequence (::std::auto_ptr< appliesToWholeSequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:6703:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] position (::std::auto_ptr< position_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:6843:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] occurrenceName (::std::auto_ptr< occurrenceName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:6919:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] occurrenceNote (::std::auto_ptr< occurrenceNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:6995:32: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] featureTypeDetails (::std::auto_ptr< featureTypeDetails_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:14226:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dbName (::std::auto_ptr< dbName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:7203:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] frame (::std::auto_ptr< frame_type > p); ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:14304:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dbUri (::std::auto_ptr< dbUri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:14380:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dbVersion (::std::auto_ptr< dbVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:14511:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdl (::std::auto_ptr< wsdl_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:14587:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlService (::std::auto_ptr< wsdlService_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:7279:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] phase (::std::auto_ptr< phase_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:7419:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignment (::std::auto_ptr< alignment_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:7588:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] referenceSequence (::std::auto_ptr< referenceSequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:7742:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] FeatureRecord (::std::auto_ptr< referenceSequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:7901:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] predicted (::std::auto_ptr< predicted_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:7977:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] experimental (::std::auto_ptr< experimental_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:14663:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlPort (::std::auto_ptr< wsdlPort_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:14739:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceOperation (::std::auto_ptr< webserviceOperation_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:8130:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:8217:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] MethodResult (::std::auto_ptr< method_type >); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:8357:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] methodIdRef (::std::auto_ptr< methodIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:8444:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] Result (::std::auto_ptr< methodIdRef_type >); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:8602:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:8678:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] methodIdRef (::std::auto_ptr< methodIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:8818:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] verdict (::std::auto_ptr< verdict_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:8973:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dataReference (::std::auto_ptr< dataReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:14815:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceVersion (::std::auto_ptr< webserviceVersion_type > p); ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:9113:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] verdict (::std::auto_ptr< verdict_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:9189:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reliability (::std::auto_ptr< reliability_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:14894:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceDate (::std::auto_ptr< webserviceDate_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:9212:34: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ExperimentalEvidence (::std::auto_ptr< dataReference_type >); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:9566:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:9642:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] index (::std::auto_ptr< index_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:9718:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] unit (::std::auto_ptr< unit_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:9794:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:9974:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] position (::std::auto_ptr< position_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:10032:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] value (::std::auto_ptr< value_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:10108:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:10285:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:10361:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:10419:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:10679:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:10755:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:10813:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:11072:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:11148:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:11206:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:11465:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] min (::std::auto_ptr< min_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:11544:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] max (::std::auto_ptr< max_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:11620:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:11678:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] minCertainty (::std::auto_ptr< minCertainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:11745:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] maxCertainty (::std::auto_ptr< maxCertainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:12003:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] max (::std::auto_ptr< max_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:12061:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:12377:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] insertion (::std::auto_ptr< insertion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:12517:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] nextPoint (::std::auto_ptr< nextPoint_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:12593:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] nextPartition (::std::auto_ptr< nextPartition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:12669:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] samePoint (::std::auto_ptr< samePoint_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:12745:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] samePartition (::std::auto_ptr< samePartition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:12821:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] outside (::std::auto_ptr< outside_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:13071:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] correspondance (::std::auto_ptr< correspondance_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:13211:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] insertion (::std::auto_ptr< insertion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:13351:39: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] explicitSequenceReference (::std::auto_ptr< explicitSequenceReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:13597:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reference (::std::auto_ptr< reference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:13832:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] geneticCode (::std::auto_ptr< geneticCode_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:13908:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] phase (::std::auto_ptr< phase_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:13984:42: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reversedTranslationDirection (::std::auto_ptr< reversedTranslationDirection_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:14226:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dbName (::std::auto_ptr< dbName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:14304:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dbUri (::std::auto_ptr< dbUri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:14380:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dbVersion (::std::auto_ptr< dbVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:14511:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdl (::std::auto_ptr< wsdl_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:14587:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlService (::std::auto_ptr< wsdlService_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:14663:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlPort (::std::auto_ptr< wsdlPort_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:14739:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceOperation (::std::auto_ptr< webserviceOperation_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:14815:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceVersion (::std::auto_ptr< webserviceVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:14894:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceDate (::std::auto_ptr< webserviceDate_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:15075:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] accession (::std::auto_ptr< accession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:15075:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] accession (::std::auto_ptr< accession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:15151:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] entryUri (::std::auto_ptr< entryUri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:15227:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] entryVersion (::std::auto_ptr< entryVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:15305:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] date (::std::auto_ptr< date_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:15481:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyName (::std::auto_ptr< ontologyName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:15559:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyUri (::std::auto_ptr< ontologyUri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:15635:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyVersion (::std::auto_ptr< ontologyVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:15870:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] accession (::std::auto_ptr< accession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:15946:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] conceptUri (::std::auto_ptr< conceptUri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:16028:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] term (::std::auto_ptr< term_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:16207:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] speciesName (::std::auto_ptr< speciesName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:16283:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] speciesNote (::std::auto_ptr< speciesNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:16459:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:16538:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] supersequence (::std::auto_ptr< supersequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:16617:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] supersequenceName (::std::auto_ptr< supersequenceName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:16693:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceVersion (::std::auto_ptr< sequenceVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:16769:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantAccession (::std::auto_ptr< variantAccession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:16845:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantNote (::std::auto_ptr< variantNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:17130:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:17206:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] uri (::std::auto_ptr< uri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:17282:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] version (::std::auto_ptr< version_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:17358:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] date (::std::auto_ptr< date_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:17434:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdl (::std::auto_ptr< wsdl_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:17510:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlService (::std::auto_ptr< wsdlService_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:17586:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlPort (::std::auto_ptr< wsdlPort_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:17662:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceOperation (::std::auto_ptr< webserviceOperation_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:17738:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceVersion (::std::auto_ptr< webserviceVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:17817:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceDate (::std::auto_ptr< webserviceDate_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:15151:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] entryUri (::std::auto_ptr< entryUri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:15227:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] entryVersion (::std::auto_ptr< entryVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:15305:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] date (::std::auto_ptr< date_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:15481:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyName (::std::auto_ptr< ontologyName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:15559:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyUri (::std::auto_ptr< ontologyUri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:15635:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyVersion (::std::auto_ptr< ontologyVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:15870:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] accession (::std::auto_ptr< accession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:15946:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] conceptUri (::std::auto_ptr< conceptUri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:16028:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] term (::std::auto_ptr< term_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:22916:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] relationName (::std::auto_ptr< relationName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:16207:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] speciesName (::std::auto_ptr< speciesName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:16283:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] speciesNote (::std::auto_ptr< speciesNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:16459:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:16538:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] supersequence (::std::auto_ptr< supersequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:16617:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] supersequenceName (::std::auto_ptr< supersequenceName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:16693:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceVersion (::std::auto_ptr< sequenceVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:16769:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantAccession (::std::auto_ptr< variantAccession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:16845:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantNote (::std::auto_ptr< variantNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:23505:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] canonicalVariant (::std::auto_ptr< canonicalVariant_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:23645:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] missing (::std::auto_ptr< missing_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:23787:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] position (::std::auto_ptr< position_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:23961:34: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignmentOfReference (::std::auto_ptr< alignmentOfReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24019:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignedSequence (::std::auto_ptr< alignedSequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24042:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignment (::std::auto_ptr< alignedSequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:17130:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:17206:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] uri (::std::auto_ptr< uri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:17282:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] version (::std::auto_ptr< version_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:17358:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] date (::std::auto_ptr< date_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:17434:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdl (::std::auto_ptr< wsdl_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:17510:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlService (::std::auto_ptr< wsdlService_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:17586:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlPort (::std::auto_ptr< wsdlPort_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:17662:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceOperation (::std::auto_ptr< webserviceOperation_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:17738:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceVersion (::std::auto_ptr< webserviceVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:17817:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceDate (::std::auto_ptr< webserviceDate_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24200:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceRecord (::std::auto_ptr< sequenceRecord_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24276:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceReference (::std::auto_ptr< sequenceReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24352:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceName (::std::auto_ptr< sequenceName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24428:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] species (::std::auto_ptr< species_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24504:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] genomeBuild (::std::auto_ptr< genomeBuild_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24580:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] chromosome (::std::auto_ptr< chromosome_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24658:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24734:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantAccession (::std::auto_ptr< variantAccession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24810:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantNote (::std::auto_ptr< variantNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24970:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] feature (::std::auto_ptr< feature_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:25046:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] condensedReferences (::std::auto_ptr< condensedReferences_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:25133:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] annotation (::std::auto_ptr< feature_type >); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:25778:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:25932:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] code (::std::auto_ptr< code_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:26122:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] aminoacid (::std::auto_ptr< aminoacid_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:26253:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:26781:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:26857:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontology (::std::auto_ptr< ontology_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:26933:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] database (::std::auto_ptr< database_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:27009:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreType (::std::auto_ptr< scoreType_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:27164:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:27316:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:27468:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:27620:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:27773:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:27925:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] feature (::std::auto_ptr< feature_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:28001:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] condensedReferences (::std::auto_ptr< condensedReferences_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:28088:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] annotation1 (::std::auto_ptr< feature_type >); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:28471:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:28547:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] methodIdRef (::std::auto_ptr< methodIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:28623:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontology (::std::auto_ptr< ontology_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:28699:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyIdRef (::std::auto_ptr< ontologyIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:28775:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] database (::std::auto_ptr< database_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:28851:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] databaseIdRef (::std::auto_ptr< databaseIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:28927:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreType (::std::auto_ptr< scoreType_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:29003:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:29244:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:29415:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] relationName (::std::auto_ptr< relationName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:29826:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localIdRef (::std::auto_ptr< localIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:20:0: freecontact_input_xsd.hxx:723:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] flat (::std::auto_ptr< flat_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:20:0: freecontact_input_xsd.hxx:746:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] FcAlignment (::std::auto_ptr< flat_type >); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:20:0: freecontact_input_xsd.hxx:847:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:22916:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] relationName (::std::auto_ptr< relationName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:20:0: freecontact_input_xsd.hxx:863:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:20:0: freecontact_input_xsd.hxx:881:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:20:0: freecontact_input_xsd.hxx:897:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:20:0: freecontact_input_xsd.hxx:913:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:20:0: freecontact_input_xsd.hxx:931:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:20:0: freecontact_input_xsd.hxx:951:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:20:0: freecontact_input_xsd.hxx:973:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:20:0: freecontact_input_xsd.hxx:996:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:20:0: freecontact_input_xsd.hxx:1013:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:20:0: freecontact_input_xsd.hxx:1029:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:20:0: freecontact_input_xsd.hxx:1047:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:20:0: freecontact_input_xsd.hxx:1061:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:20:0: freecontact_input_xsd.hxx:1078:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:23505:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] canonicalVariant (::std::auto_ptr< canonicalVariant_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:23645:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] missing (::std::auto_ptr< missing_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:23787:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] position (::std::auto_ptr< position_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:23961:34: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignmentOfReference (::std::auto_ptr< alignmentOfReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:24019:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignedSequence (::std::auto_ptr< alignedSequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:24042:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignment (::std::auto_ptr< alignedSequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:24200:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceRecord (::std::auto_ptr< sequenceRecord_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:24276:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceReference (::std::auto_ptr< sequenceReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:24352:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceName (::std::auto_ptr< sequenceName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:24428:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] species (::std::auto_ptr< species_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:24504:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] genomeBuild (::std::auto_ptr< genomeBuild_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:24580:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] chromosome (::std::auto_ptr< chromosome_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:24658:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:24734:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantAccession (::std::auto_ptr< variantAccession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:24810:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantNote (::std::auto_ptr< variantNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:24970:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] feature (::std::auto_ptr< feature_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:25046:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] condensedReferences (::std::auto_ptr< condensedReferences_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:25133:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] annotation (::std::auto_ptr< feature_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:21:0: freecontact_output_xsd.hxx:681:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:21:0: freecontact_output_xsd.hxx:697:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:21:0: freecontact_output_xsd.hxx:715:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:21:0: freecontact_output_xsd.hxx:731:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:21:0: freecontact_output_xsd.hxx:747:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:21:0: freecontact_output_xsd.hxx:765:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:21:0: freecontact_output_xsd.hxx:785:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:21:0: freecontact_output_xsd.hxx:807:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:21:0: freecontact_output_xsd.hxx:830:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:21:0: freecontact_output_xsd.hxx:847:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:21:0: freecontact_output_xsd.hxx:863:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:21:0: freecontact_output_xsd.hxx:881:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:21:0: freecontact_output_xsd.hxx:895:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:21:0: freecontact_output_xsd.hxx:912:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:25778:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:25932:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] code (::std::auto_ptr< code_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:26122:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] aminoacid (::std::auto_ptr< aminoacid_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:26253:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:26781:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:26857:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontology (::std::auto_ptr< ontology_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:26933:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] database (::std::auto_ptr< database_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:27009:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreType (::std::auto_ptr< scoreType_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:27164:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:27316:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:27468:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:27620:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:27773:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:22:0: ../lib/freecontact.h:69:54: warning: ignoring attributes on template argument ‘freecontact::__m128i {aka __vector(2) long long int}’ [-Wignored-attributes] class LIBFREEC_API ali_t : public std::vector<__m128i> ^ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:27925:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] feature (::std::auto_ptr< feature_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:22:0: ../lib/freecontact.h:113:56: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] ali_t& push(const std::vector& __al) throw (alilen_error); ^~~~~ ../lib/freecontact.h:116:50: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] inline ali_t& push(const std::string& __l) throw (alilen_error) ^~~~~ In file included from _write_bioxsd.cpp:22:0: ../lib/freecontact.h: In constructor ‘freecontact::ali_t::ali_t(uint16_t)’: ../lib/freecontact.h:80:79: warning: ignoring attributes on template argument ‘freecontact::__m128i {aka __vector(2) long long int}’ [-Wignored-attributes] ali_t( const uint16_t __alilen = 0 ) : std::vector<__m128i>(), seqcnt(0), alilen(__alilen), alilen16(( alilen-1 )/16 + 1), alilenpad( 16 * alilen16 ) ^ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:28001:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] condensedReferences (::std::auto_ptr< condensedReferences_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:28088:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] annotation1 (::std::auto_ptr< feature_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:28471:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:28547:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] methodIdRef (::std::auto_ptr< methodIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:28623:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontology (::std::auto_ptr< ontology_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:28699:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyIdRef (::std::auto_ptr< ontologyIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:28775:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] database (::std::auto_ptr< database_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:28851:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] databaseIdRef (::std::auto_ptr< databaseIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from _write_bioxsd.cpp:22:0: ../lib/freecontact.h: At global scope: ../lib/freecontact.h:185:23: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error); ^~~~~ ../lib/freecontact.h:219:23: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error); ^~~~~ ../lib/freecontact.h:227:23: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error); ^~~~~ ../lib/freecontact.h:234:23: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error) ^~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:28927:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreType (::std::auto_ptr< scoreType_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:29003:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:29244:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:29415:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] relationName (::std::auto_ptr< relationName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41:0: BioXSD-1.1_xsd.hxx:29826:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localIdRef (::std::auto_ptr< localIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:110:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequence (::std::auto_ptr< sequence_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:140:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] species (::std::auto_ptr< species_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:170:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reference (::std::auto_ptr< reference_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:200:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:230:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:260:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] translationData (::std::auto_ptr< translationData_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:290:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] inlineBaseQuality (::std::auto_ptr< inlineBaseQuality_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:376:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:30:1: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr _get_bxScore(const fc::contact_t& __ct, const std::string& __scid); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp: In function ‘std::__cxx11::string _xml_flatali(std::istream&, bool)’: _write_bioxsd.cpp:38:9: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr xml( fix::alignment(__is) ); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:420:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp: In function ‘void _write_bioxsd(const freecontact::ali_t&, const resn_mapper_t&, const std::map, std::vector >&, bool)’: _write_bioxsd.cpp:53:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr seqSeg_p(new BioXSD::SequenceSegment()); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:444:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] len (::std::auto_ptr< len_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:478:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] min (::std::auto_ptr< min_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:508:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] max (::std::auto_ptr< max_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:56:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr seqPos_p(new BioXSD::SequencePosition()); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:59:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr seqRef_p(new BioXSD::SequenceReference()); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:538:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:562:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] minCertainty (::std::auto_ptr< minCertainty_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:592:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] maxCertainty (::std::auto_ptr< maxCertainty_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:634:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:63:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr seqRec_p( new BioXSD::GeneralAminoacidSequenceRecord( BioXSD::GeneralAminoacidSequence( ucq ))); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:658:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] bases (::std::auto_ptr< bases_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:692:34: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localAlignmentPosition (::std::auto_ptr< localAlignmentPosition_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:67:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr refSeq_p(new BioXSD::referenceSequence()); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:722:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceRecord (::std::auto_ptr< sequenceRecord_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:73:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr metCatCon_p(new BioXSD::SemanticConcept()); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:752:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceReference (::std::auto_ptr< sequenceReference_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:782:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceName (::std::auto_ptr< sequenceName_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:812:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] species (::std::auto_ptr< species_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:842:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] genomeBuild (::std::auto_ptr< genomeBuild_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:79:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr metCit_p(new BioXSD::EntryReference()); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:872:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] chromosome (::std::auto_ptr< chromosome_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:902:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] subsequencePosition (::std::auto_ptr< subsequencePosition_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:932:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantAccession (::std::auto_ptr< variantAccession_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:962:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantNote (::std::auto_ptr< variantNote_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1046:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reversedDirection (::std::auto_ptr< reversedDirection_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1114:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1180:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] className (::std::auto_ptr< className_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1228:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] properties (::std::auto_ptr< properties_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1262:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] specificFeatureName (::std::auto_ptr< specificFeatureName_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1346:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1398:34: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] appliesToWholeSequence (::std::auto_ptr< appliesToWholeSequence_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1428:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] position (::std::auto_ptr< position_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1476:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] occurrenceName (::std::auto_ptr< occurrenceName_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1506:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] occurrenceNote (::std::auto_ptr< occurrenceNote_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1536:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] featureTypeDetails (::std::auto_ptr< featureTypeDetails_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1602:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] frame (::std::auto_ptr< frame_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:82:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr method_p(new BioXSD::method1("freecontact", "M#fc")); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1632:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] phase (::std::auto_ptr< phase_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1680:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignment (::std::auto_ptr< alignment_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1507:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequence (::std::auto_ptr< sequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1708:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] referenceSequence (::std::auto_ptr< referenceSequence_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1585:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] species (::std::auto_ptr< species_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1665:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reference (::std::auto_ptr< reference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1741:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1817:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1893:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] translationData (::std::auto_ptr< translationData_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1778:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] predicted (::std::auto_ptr< predicted_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1969:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] inlineBaseQuality (::std::auto_ptr< inlineBaseQuality_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1992:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] BiosequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:86:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr sc_l1_p(new BioXSD::scoreType("S#l1")); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1808:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] experimental (::std::auto_ptr< experimental_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:88:9: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr metCit_p(new BioXSD::EntryReference()); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:94:9: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr method_p(new BioXSD::Method("l1-norm")); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1836:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:100:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr sc_MI_p(new BioXSD::scoreType("S#MI")); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:102:9: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr metCit_p(new BioXSD::EntryReference()); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1882:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] methodIdRef (::std::auto_ptr< methodIdRef_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:108:9: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr method_p(new BioXSD::Method("Mutual information")); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:114:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr sc_fr_p(new BioXSD::scoreType("S#fr")); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:116:9: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr metCit_p(new BioXSD::EntryReference()); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1934:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:122:9: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr method_p(new BioXSD::Method("Frobenius norm")); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:128:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr featCon_p(new BioXSD::SemanticConcept()); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:1964:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] methodIdRef (::std::auto_ptr< methodIdRef_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:135:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr feat_p(new BioXSD::FeatureType()); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2012:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] verdict (::std::auto_ptr< verdict_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2040:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dataReference (::std::auto_ptr< dataReference_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2088:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] verdict (::std::auto_ptr< verdict_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2105:45: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] GeneralNucleotideSequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2186:44: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] GeneralAminoacidSequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:139:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr cref_p(new BioXSD::condensedReferences1()); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2118:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reliability (::std::auto_ptr< reliability_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:142:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr ann_p(new BioXSD::annotation1(feat_p)); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2267:38: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] NucleotideSequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2206:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2348:37: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] AminoacidSequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2236:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] index (::std::auto_ptr< index_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2266:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] unit (::std::auto_ptr< unit_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2296:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2330:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] position (::std::auto_ptr< position_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2354:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] value (::std::auto_ptr< value_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2611:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2384:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2418:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2448:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2472:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2516:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3051:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3109:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] len (::std::auto_ptr< len_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2546:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2570:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2614:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2644:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2668:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2712:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] min (::std::auto_ptr< min_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2742:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] max (::std::auto_ptr< max_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:156:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr pt1_p(new BioXSD::SequencePoint()); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2772:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2796:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] minCertainty (::std::auto_ptr< minCertainty_type > x) ^~~~~~~~ _write_bioxsd.cpp:158:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr pt2_p(new BioXSD::SequencePoint()); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:161:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr pos_p(new BioXSD::SequencePosition()); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2826:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] maxCertainty (::std::auto_ptr< maxCertainty_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2870:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] max (::std::auto_ptr< max_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:165:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr occ_p(new BioXSD::occurrence()); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2894:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:2956:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] insertion (::std::auto_ptr< insertion_type > x) ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3287:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] min (::std::auto_ptr< min_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3366:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] max (::std::auto_ptr< max_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3442:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3500:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] minCertainty (::std::auto_ptr< minCertainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3567:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] maxCertainty (::std::auto_ptr< maxCertainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3004:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] nextPoint (::std::auto_ptr< nextPoint_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3034:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] nextPartition (::std::auto_ptr< nextPartition_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3064:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] samePoint (::std::auto_ptr< samePoint_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3094:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] samePartition (::std::auto_ptr< samePartition_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3877:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3935:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] bases (::std::auto_ptr< bases_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3124:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] outside (::std::auto_ptr< outside_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3162:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] correspondance (::std::auto_ptr< correspondance_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3210:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] insertion (::std::auto_ptr< insertion_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3258:37: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] explicitSequenceReference (::std::auto_ptr< explicitSequenceReference_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3296:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reference (::std::auto_ptr< reference_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp:177:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr occRef_p(new BioXSD::blockWithOccurrenceReferences()); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3348:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] geneticCode (::std::auto_ptr< geneticCode_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3378:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] phase (::std::auto_ptr< phase_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3408:40: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reversedTranslationDirection (::std::auto_ptr< reversedTranslationDirection_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4110:36: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localAlignmentPosition (::std::auto_ptr< localAlignmentPosition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4186:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceRecord (::std::auto_ptr< sequenceRecord_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4262:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceReference (::std::auto_ptr< sequenceReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4338:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceName (::std::auto_ptr< sequenceName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3446:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dbName (::std::auto_ptr< dbName_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4414:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] species (::std::auto_ptr< species_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4490:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] genomeBuild (::std::auto_ptr< genomeBuild_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4566:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] chromosome (::std::auto_ptr< chromosome_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4644:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3476:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dbUri (::std::auto_ptr< dbUri_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4720:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantAccession (::std::auto_ptr< variantAccession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4796:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantNote (::std::auto_ptr< variantNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3506:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dbVersion (::std::auto_ptr< dbVersion_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp: At global scope: _write_bioxsd.cpp:199:1: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr _get_bxScore( const fc::contact_t& __ct, const std::string& __scid ) ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ _write_bioxsd.cpp: In function ‘std::auto_ptr _get_bxScore(const freecontact::contact_t&, const string&)’: _write_bioxsd.cpp:201:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr MI_score_p(new BioXSD::Score( bo::str(bo::format("%g") % __ct.score) )); ^~~~~~~~ In file included from /usr/include/c++/7/bits/locale_conv.h:41:0, from /usr/include/c++/7/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3560:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdl (::std::auto_ptr< wsdl_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3590:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlService (::std::auto_ptr< wsdlService_type > x) ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:5064:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reversedDirection (::std::auto_ptr< reversedDirection_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3620:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlPort (::std::auto_ptr< wsdlPort_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3650:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceOperation (::std::auto_ptr< webserviceOperation_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3680:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceVersion (::std::auto_ptr< webserviceVersion_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3710:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceDate (::std::auto_ptr< webserviceDate_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3744:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] accession (::std::auto_ptr< accession_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3774:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] entryUri (::std::auto_ptr< entryUri_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3804:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] entryVersion (::std::auto_ptr< entryVersion_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3834:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] date (::std::auto_ptr< date_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3868:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyName (::std::auto_ptr< ontologyName_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3898:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyUri (::std::auto_ptr< ontologyUri_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3928:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyVersion (::std::auto_ptr< ontologyVersion_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:3986:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] accession (::std::auto_ptr< accession_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4016:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] conceptUri (::std::auto_ptr< conceptUri_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4046:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] term (::std::auto_ptr< term_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4080:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] speciesName (::std::auto_ptr< speciesName_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:5589:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4110:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] speciesNote (::std::auto_ptr< speciesNote_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:5798:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] className (::std::auto_ptr< className_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:5938:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] properties (::std::auto_ptr< properties_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4144:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] subsequencePosition (::std::auto_ptr< subsequencePosition_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4174:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] supersequence (::std::auto_ptr< supersequence_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4204:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] supersequenceName (::std::auto_ptr< supersequenceName_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4234:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceVersion (::std::auto_ptr< sequenceVersion_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4264:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantAccession (::std::auto_ptr< variantAccession_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4294:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantNote (::std::auto_ptr< variantNote_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6115:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] specificFeatureName (::std::auto_ptr< specificFeatureName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4358:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4388:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] uri (::std::auto_ptr< uri_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4418:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] version (::std::auto_ptr< version_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4448:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] date (::std::auto_ptr< date_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4478:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdl (::std::auto_ptr< wsdl_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4508:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlService (::std::auto_ptr< wsdlService_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4538:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlPort (::std::auto_ptr< wsdlPort_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4568:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceOperation (::std::auto_ptr< webserviceOperation_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6385:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6627:36: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] appliesToWholeSequence (::std::auto_ptr< appliesToWholeSequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6703:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] position (::std::auto_ptr< position_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6843:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] occurrenceName (::std::auto_ptr< occurrenceName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6919:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] occurrenceNote (::std::auto_ptr< occurrenceNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6995:32: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] featureTypeDetails (::std::auto_ptr< featureTypeDetails_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4598:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceVersion (::std::auto_ptr< webserviceVersion_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:4628:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceDate (::std::auto_ptr< webserviceDate_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5311:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] relationName (::std::auto_ptr< relationName_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5439:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] canonicalVariant (::std::auto_ptr< canonicalVariant_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5487:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] missing (::std::auto_ptr< missing_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5535:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] position (::std::auto_ptr< position_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5569:32: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignmentOfReference (::std::auto_ptr< alignmentOfReference_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5593:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignedSequence (::std::auto_ptr< alignedSequence_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5627:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceRecord (::std::auto_ptr< sequenceRecord_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5657:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceReference (::std::auto_ptr< sequenceReference_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5687:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceName (::std::auto_ptr< sequenceName_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5717:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] species (::std::auto_ptr< species_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5747:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] genomeBuild (::std::auto_ptr< genomeBuild_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5777:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] chromosome (::std::auto_ptr< chromosome_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5807:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] subsequencePosition (::std::auto_ptr< subsequencePosition_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5837:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantAccession (::std::auto_ptr< variantAccession_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5867:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantNote (::std::auto_ptr< variantNote_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5895:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] feature (::std::auto_ptr< feature_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:5925:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] condensedReferences (::std::auto_ptr< condensedReferences_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6089:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6117:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] code (::std::auto_ptr< code_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6195:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] aminoacid (::std::auto_ptr< aminoacid_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6249:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6359:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6389:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontology (::std::auto_ptr< ontology_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6419:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] database (::std::auto_ptr< database_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6449:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreType (::std::auto_ptr< scoreType_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6477:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7203:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] frame (::std::auto_ptr< frame_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7279:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] phase (::std::auto_ptr< phase_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6505:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6533:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6561:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6589:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6617:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] feature (::std::auto_ptr< feature_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6647:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] condensedReferences (::std::auto_ptr< condensedReferences_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6707:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6737:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] methodIdRef (::std::auto_ptr< methodIdRef_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6767:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontology (::std::auto_ptr< ontology_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6797:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyIdRef (::std::auto_ptr< ontologyIdRef_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6827:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] database (::std::auto_ptr< database_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6857:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] databaseIdRef (::std::auto_ptr< databaseIdRef_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6887:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreType (::std::auto_ptr< scoreType_type > x) ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7419:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignment (::std::auto_ptr< alignment_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6917:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:6969:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7003:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] relationName (::std::auto_ptr< relationName_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7103:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localIdRef (::std::auto_ptr< localIdRef_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7588:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] referenceSequence (::std::auto_ptr< referenceSequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7742:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] FeatureRecord (::std::auto_ptr< referenceSequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7901:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] predicted (::std::auto_ptr< predicted_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7977:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] experimental (::std::auto_ptr< experimental_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8130:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8217:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] MethodResult (::std::auto_ptr< method_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8357:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] methodIdRef (::std::auto_ptr< methodIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8444:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] Result (::std::auto_ptr< methodIdRef_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8602:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8678:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] methodIdRef (::std::auto_ptr< methodIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8818:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] verdict (::std::auto_ptr< verdict_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8973:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dataReference (::std::auto_ptr< dataReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9113:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] verdict (::std::auto_ptr< verdict_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9189:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reliability (::std::auto_ptr< reliability_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9212:34: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ExperimentalEvidence (::std::auto_ptr< dataReference_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9566:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9642:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] index (::std::auto_ptr< index_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9718:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] unit (::std::auto_ptr< unit_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9794:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9974:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] position (::std::auto_ptr< position_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10032:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] value (::std::auto_ptr< value_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10108:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10285:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10361:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10419:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10679:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10755:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10813:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11072:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11148:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11206:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11465:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] min (::std::auto_ptr< min_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11544:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] max (::std::auto_ptr< max_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11620:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11678:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] minCertainty (::std::auto_ptr< minCertainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11745:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] maxCertainty (::std::auto_ptr< maxCertainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12003:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] max (::std::auto_ptr< max_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12061:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12377:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] insertion (::std::auto_ptr< insertion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12517:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] nextPoint (::std::auto_ptr< nextPoint_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12593:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] nextPartition (::std::auto_ptr< nextPartition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12669:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] samePoint (::std::auto_ptr< samePoint_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12745:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] samePartition (::std::auto_ptr< samePartition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12821:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] outside (::std::auto_ptr< outside_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13071:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] correspondance (::std::auto_ptr< correspondance_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13211:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] insertion (::std::auto_ptr< insertion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13351:39: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] explicitSequenceReference (::std::auto_ptr< explicitSequenceReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13597:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reference (::std::auto_ptr< reference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13832:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] geneticCode (::std::auto_ptr< geneticCode_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13908:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] phase (::std::auto_ptr< phase_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13984:42: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reversedTranslationDirection (::std::auto_ptr< reversedTranslationDirection_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14226:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dbName (::std::auto_ptr< dbName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14304:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dbUri (::std::auto_ptr< dbUri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14380:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dbVersion (::std::auto_ptr< dbVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14511:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdl (::std::auto_ptr< wsdl_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14587:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlService (::std::auto_ptr< wsdlService_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14663:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlPort (::std::auto_ptr< wsdlPort_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14739:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceOperation (::std::auto_ptr< webserviceOperation_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14815:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceVersion (::std::auto_ptr< webserviceVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14894:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceDate (::std::auto_ptr< webserviceDate_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15075:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] accession (::std::auto_ptr< accession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15151:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] entryUri (::std::auto_ptr< entryUri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15227:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] entryVersion (::std::auto_ptr< entryVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15305:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] date (::std::auto_ptr< date_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15481:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyName (::std::auto_ptr< ontologyName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15559:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyUri (::std::auto_ptr< ontologyUri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15635:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyVersion (::std::auto_ptr< ontologyVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15870:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] accession (::std::auto_ptr< accession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15946:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] conceptUri (::std::auto_ptr< conceptUri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16028:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] term (::std::auto_ptr< term_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16207:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] speciesName (::std::auto_ptr< speciesName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16283:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] speciesNote (::std::auto_ptr< speciesNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16459:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16538:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] supersequence (::std::auto_ptr< supersequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16617:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] supersequenceName (::std::auto_ptr< supersequenceName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16693:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceVersion (::std::auto_ptr< sequenceVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16769:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantAccession (::std::auto_ptr< variantAccession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16845:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantNote (::std::auto_ptr< variantNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17130:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17206:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] uri (::std::auto_ptr< uri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17282:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] version (::std::auto_ptr< version_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17358:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] date (::std::auto_ptr< date_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17434:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdl (::std::auto_ptr< wsdl_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17510:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlService (::std::auto_ptr< wsdlService_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17586:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlPort (::std::auto_ptr< wsdlPort_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17662:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceOperation (::std::auto_ptr< webserviceOperation_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17738:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceVersion (::std::auto_ptr< webserviceVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17817:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceDate (::std::auto_ptr< webserviceDate_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:22916:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] relationName (::std::auto_ptr< relationName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:23505:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] canonicalVariant (::std::auto_ptr< canonicalVariant_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:23645:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] missing (::std::auto_ptr< missing_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:23787:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] position (::std::auto_ptr< position_type > p); ^~~~~~~~ BioXSD-1.1_xsd.cxx:7570:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] BiosequenceRecord (::std::auto_ptr< sequence_type > sequence) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:23961:34: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignmentOfReference (::std::auto_ptr< alignmentOfReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24019:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignedSequence (::std::auto_ptr< alignedSequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24042:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignment (::std::auto_ptr< alignedSequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::BiosequenceRecord::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:7630:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24200:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceRecord (::std::auto_ptr< sequenceRecord_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24276:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceReference (::std::auto_ptr< sequenceReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24352:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceName (::std::auto_ptr< sequenceName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24428:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] species (::std::auto_ptr< species_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24504:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] genomeBuild (::std::auto_ptr< genomeBuild_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24580:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] chromosome (::std::auto_ptr< chromosome_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24658:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24734:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantAccession (::std::auto_ptr< variantAccession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24810:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantNote (::std::auto_ptr< variantNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24970:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] feature (::std::auto_ptr< feature_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:25046:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] condensedReferences (::std::auto_ptr< condensedReferences_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:25133:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] annotation (::std::auto_ptr< feature_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:25778:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:25932:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] code (::std::auto_ptr< code_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26122:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] aminoacid (::std::auto_ptr< aminoacid_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26253:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26781:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26857:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontology (::std::auto_ptr< ontology_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26933:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] database (::std::auto_ptr< database_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27009:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreType (::std::auto_ptr< scoreType_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27164:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27316:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27468:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27620:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7641:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< sequence_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27773:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27925:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] feature (::std::auto_ptr< feature_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28001:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] condensedReferences (::std::auto_ptr< condensedReferences_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28088:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] annotation1 (::std::auto_ptr< feature_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7658:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7669:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< species_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7686:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7697:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< reference_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7714:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7725:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< name_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7742:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7753:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< note_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7770:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7781:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< translationData_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7798:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7809:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< inlineBaseQuality_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28471:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28547:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] methodIdRef (::std::auto_ptr< methodIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: At global scope: BioXSD-1.1_xsd.cxx:7880:43: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] GeneralNucleotideSequenceRecord (::std::auto_ptr< sequence_type > sequence) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28623:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontology (::std::auto_ptr< ontology_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28699:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyIdRef (::std::auto_ptr< ontologyIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28775:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] database (::std::auto_ptr< database_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28851:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] databaseIdRef (::std::auto_ptr< databaseIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28927:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreType (::std::auto_ptr< scoreType_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:29003:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:29244:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:29415:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] relationName (::std::auto_ptr< relationName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645:0, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:29826:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localIdRef (::std::auto_ptr< localIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7929:42: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] GeneralAminoacidSequenceRecord (::std::auto_ptr< sequence_type > sequence) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:7978:36: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] NucleotideSequenceRecord (::std::auto_ptr< sequence_type > sequence) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41:0: freecontact_output_xsd.hxx:681:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41:0: freecontact_output_xsd.hxx:697:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41:0: freecontact_output_xsd.hxx:715:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41:0: freecontact_output_xsd.hxx:731:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41:0: freecontact_output_xsd.hxx:747:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41:0: freecontact_output_xsd.hxx:765:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41:0: freecontact_output_xsd.hxx:785:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41:0: freecontact_output_xsd.hxx:807:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41:0: freecontact_output_xsd.hxx:830:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:8027:35: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] AminoacidSequenceRecord (::std::auto_ptr< sequence_type > sequence) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41:0: freecontact_output_xsd.hxx:847:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41:0: freecontact_output_xsd.hxx:863:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41:0: freecontact_output_xsd.hxx:881:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41:0: freecontact_output_xsd.hxx:895:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41:0: freecontact_output_xsd.hxx:912:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::BiosequenceAlignment::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:8118:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:8127:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< alignedBy_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:8143:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:8152:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< alignedSequence_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:8168:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:8179:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< note_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::AlignedBiosequence::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:8924:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:8935:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< localAlignmentPosition_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:8952:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:8963:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< sequenceRecord_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:8980:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:8991:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< sequenceReference_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9008:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9019:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< sequenceName_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9036:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9047:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< species_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9064:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9075:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< genomeBuild_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9092:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx:68:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9103:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< chromosome_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9120:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9131:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< subsequencePosition_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9148:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx: In function ‘std::auto_ptr freecontact_output_xsd::contactMap(const string&, xml_schema::flags, const properties&)’: freecontact_output_xsd.cxx:85:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] return ::std::auto_ptr< ::BioXSD::FeatureRecord > ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx: At global scope: freecontact_output_xsd.cxx:90:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx: In function ‘std::auto_ptr freecontact_output_xsd::contactMap(const string&, xml_schema::error_handler&, xml_schema::flags, const properties&)’: freecontact_output_xsd.cxx:107:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] return ::std::auto_ptr< ::BioXSD::FeatureRecord > ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx: At global scope: freecontact_output_xsd.cxx:112:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx: In function ‘std::auto_ptr freecontact_output_xsd::contactMap(const string&, xercesc_3_1::DOMErrorHandler&, xml_schema::flags, const properties&)’: freecontact_output_xsd.cxx:125:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] return ::std::auto_ptr< ::BioXSD::FeatureRecord > ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9159:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< variantAccession_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx: At global scope: freecontact_output_xsd.cxx:130:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9176:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx:143:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9187:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< variantNote_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9204:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx:157:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx:167:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx:181:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx:196:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx:207:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx: In function ‘std::auto_ptr freecontact_output_xsd::contactMap(xercesc_3_1::InputSource&, xml_schema::flags, const properties&)’: freecontact_output_xsd.cxx:220:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] return ::std::auto_ptr< ::BioXSD::FeatureRecord > ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx: At global scope: freecontact_output_xsd.cxx:225:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx: In function ‘std::auto_ptr freecontact_output_xsd::contactMap(xercesc_3_1::InputSource&, xml_schema::error_handler&, xml_schema::flags, const properties&)’: freecontact_output_xsd.cxx:238:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] return ::std::auto_ptr< ::BioXSD::FeatureRecord > ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx: At global scope: freecontact_output_xsd.cxx:243:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx: In function ‘std::auto_ptr freecontact_output_xsd::contactMap(xercesc_3_1::InputSource&, xercesc_3_1::DOMErrorHandler&, xml_schema::flags, const properties&)’: freecontact_output_xsd.cxx:256:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] return ::std::auto_ptr< ::BioXSD::FeatureRecord > ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx: At global scope: freecontact_output_xsd.cxx:261:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx: In function ‘std::auto_ptr freecontact_output_xsd::contactMap(const xercesc_3_1::DOMDocument&, xml_schema::flags, const properties&)’: freecontact_output_xsd.cxx:271:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] return ::std::auto_ptr< ::BioXSD::FeatureRecord > ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx:280:12: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9213:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< gap_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9229:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9238:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< insert_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9254:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9263:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< frameshift_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9279:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9290:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< reversedDirection_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9307:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9316:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< sequenceScore_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx:289:14: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx: At global scope: freecontact_output_xsd.cxx:307:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx: In function ‘std::auto_ptr freecontact_output_xsd::contactMap(xsd::cxx::xml::dom::auto_ptr, xml_schema::flags, const properties&)’: freecontact_output_xsd.cxx:329:12: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_output_xsd.cxx:339:14: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::BioXSD::FeatureRecord > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::FeatureType::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:9610:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9621:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< name_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9638:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9647:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< equalConcept_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9663:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9672:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< equalAlias_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9688:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9699:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< className_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9716:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9725:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< classConcept_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9741:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9752:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< properties_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::FeatureTypeDetails::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:9866:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9877:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< specificFeatureName_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9894:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9903:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< specificFeatureConcept_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9919:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9928:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< specificFeatureAlias_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9944:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9953:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< databaseEntry_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9969:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9980:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< note_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:9998:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< association_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::FeatureOccurrenceData::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:10123:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10134:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< appliesToWholeSequence_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10151:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10162:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< position_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10179:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10188:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< occurrenceEntryReference_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10204:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10215:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< occurrenceName_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10232:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10243:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< occurrenceNote_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10260:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10271:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< featureTypeDetails_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10288:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10297:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< score_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10313:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10322:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< evidence_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10339:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< frame_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10352:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10363:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< phase_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10381:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< variation_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10392:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< alignment_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: At global scope: BioXSD-1.1_xsd.cxx:10460:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] FeatureRecord (::std::auto_ptr< referenceSequence_type > referenceSequence) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::FeatureRecord::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:10509:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< referenceSequence_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10523:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< annotation_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10534:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< blockWithOccurrenceReferences_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::Evidence::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:10633:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10644:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< predicted_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10661:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10672:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< experimental_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: At global scope: BioXSD-1.1_xsd.cxx:10733:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] MethodResult (::std::auto_ptr< method_type > method) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::MethodResult::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:10779:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< method_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10792:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10801:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< score_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: At global scope: BioXSD-1.1_xsd.cxx:10868:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] Result (::std::auto_ptr< methodIdRef_type > methodIdRef) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::Result::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:10913:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10924:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< methodIdRef_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10941:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:10950:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< score_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::PredictionResult::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:11060:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11071:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< method_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11088:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11099:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< methodIdRef_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11116:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11125:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< score_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11141:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11152:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< verdict_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: At global scope: BioXSD-1.1_xsd.cxx:11217:32: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ExperimentalEvidence (::std::auto_ptr< dataReference_type > dataReference) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::ExperimentalEvidence::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:11268:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11279:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< dataReference_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11296:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11305:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< citation_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11321:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11332:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< verdict_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11349:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11360:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< reliability_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::ScoreType::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:11482:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11491:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< concept_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11507:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11516:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< method_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11532:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11541:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< methodIdRef_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::Score::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:11679:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:11690:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< position_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::GeneralSequencePosition::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:12613:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12622:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< point_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12638:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12649:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< insertion_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12666:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12675:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< segment_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12691:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12702:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< nextPoint_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12719:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12730:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< nextPartition_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12747:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12758:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< samePoint_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12775:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12786:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< samePartition_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12803:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12814:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< outside_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::GeneralOutsideSequencePosition::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:12970:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12981:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< correspondance_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:12998:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:13007:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< point_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:13023:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:13034:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< insertion_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:13051:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:13060:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< segment_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:13076:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:13087:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< explicitSequenceReference_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::GeneticCode::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:13231:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:13242:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< reference_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:13260:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< codon_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::TranslationData::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:13354:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:13365:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< geneticCode_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:13382:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:13393:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< phase_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:13410:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:13421:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< reversedTranslationDirection_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact.cpp:25:0: ../lib/freecontact.h:69:54: warning: ignoring attributes on template argument ‘freecontact::__m128i {aka __vector(2) long long int}’ [-Wignored-attributes] class LIBFREEC_API ali_t : public std::vector<__m128i> ^ In file included from freecontact.cpp:25:0: ../lib/freecontact.h:113:56: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] ali_t& push(const std::vector& __al) throw (alilen_error); ^~~~~ ../lib/freecontact.h:116:50: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] inline ali_t& push(const std::string& __l) throw (alilen_error) ^~~~~ In file included from freecontact.cpp:25:0: ../lib/freecontact.h: In constructor ‘freecontact::ali_t::ali_t(uint16_t)’: ../lib/freecontact.h:80:79: warning: ignoring attributes on template argument ‘freecontact::__m128i {aka __vector(2) long long int}’ [-Wignored-attributes] ali_t( const uint16_t __alilen = 0 ) : std::vector<__m128i>(), seqcnt(0), alilen(__alilen), alilen16(( alilen-1 )/16 + 1), alilenpad( 16 * alilen16 ) ^ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::SequenceReference::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:14184:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:14195:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< subsequencePosition_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact.cpp:25:0: ../lib/freecontact.h: At global scope: ../lib/freecontact.h:185:23: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error); ^~~~~ ../lib/freecontact.h:219:23: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error); ^~~~~ ../lib/freecontact.h:227:23: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error); ^~~~~ ../lib/freecontact.h:234:23: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error) ^~~~~ BioXSD-1.1_xsd.cxx:14212:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:14223:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< supersequence_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:14240:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:14251:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< supersequenceName_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::Method::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:14410:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:14419:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< categoryConcept_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:14435:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:14444:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< citation_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact.cpp: In function ‘int main(int, char**)’: freecontact.cpp:165:9: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] auto_ptr ali_ifs_p; ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/boost/function/function_base.hpp:16, from /usr/include/boost/function/detail/prologue.hpp:17, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:18, from /usr/include/boost/function/function1.hpp:11, from /usr/include/boost/program_options/value_semantic.hpp:13, from /usr/include/boost/program_options/options_description.hpp:13, from /usr/include/boost/program_options.hpp:15, from freecontact.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact.cpp:169:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ali_ifs_p = auto_ptr(new std::ifstream(vm["ali"].as().c_str())); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/boost/function/function_base.hpp:16, from /usr/include/boost/function/detail/prologue.hpp:17, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:18, from /usr/include/boost/function/function1.hpp:11, from /usr/include/boost/program_options/value_semantic.hpp:13, from /usr/include/boost/program_options/options_description.hpp:13, from /usr/include/boost/program_options.hpp:15, from freecontact.cpp:17: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::association::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:17632:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:17643:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< relationName_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:17660:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:17669:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< relationConcept_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:17685:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:17694:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< associatedConcept_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:17710:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:17719:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< associatedDatabaseEntry_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:17735:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:17744:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< associatedDatabase_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:17760:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:17769:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< associatedFeature_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::variation::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:17927:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:17938:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< canonicalVariant_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:17955:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:17964:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< variant_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:17980:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:17991:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< missing_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18008:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18017:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< score_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18033:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18044:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< position_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: At global scope: BioXSD-1.1_xsd.cxx:18102:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignment (::std::auto_ptr< alignedSequence_type > alignedSequence) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::alignment::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:18148:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< alignmentOfReference_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18161:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18172:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< alignedSequence_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::referenceSequence::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:18292:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18303:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< sequenceRecord_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18320:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18331:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< sequenceReference_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18348:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18359:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< sequenceName_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18376:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18387:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< species_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18404:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18415:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< genomeBuild_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18432:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18443:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< chromosome_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18460:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18471:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< subsequencePosition_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18488:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18499:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< variantAccession_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18516:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18527:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< variantNote_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: At global scope: BioXSD-1.1_xsd.cxx:18590:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] annotation (::std::auto_ptr< feature_type > feature) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::annotation::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:18638:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18649:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< feature_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18667:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< condensedReferences_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18680:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18689:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< occurrence_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::blockWithOccurrenceReferences::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:18801:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< database_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18812:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ontology_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18823:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< semanticConcept_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18834:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< method_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18845:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< scoreType_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:18856:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< annotation_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::alignmentOfReference::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:19177:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:19186:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< gap_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:19202:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:19211:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< insert_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:19227:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:19236:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< frameshift_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:19252:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:19261:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< sequenceScore_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::condensedReferences::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:19360:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:19371:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< method_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:19388:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:19399:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ontology_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:19416:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:19427:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< database_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:19444:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:19455:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< scoreType_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: At global scope: BioXSD-1.1_xsd.cxx:19944:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] annotation1 (::std::auto_ptr< feature_type > feature) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::annotation1::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:19992:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20003:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< feature_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20021:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< condensedReferences_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20035:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< occurrence_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::condensedReferences1::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:20290:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20301:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< method_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20318:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20329:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< methodIdRef_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20346:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20357:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ontology_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20374:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20385:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ontologyIdRef_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20402:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20413:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< database_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20430:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20441:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< databaseIdRef_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20458:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20469:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< scoreType_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20486:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20497:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< scoreTypeIdRef_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::occurrence::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:20598:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< association_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::association1::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:20702:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20713:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< relationName_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20730:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20739:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< relationConcept_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20755:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20764:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< relationConceptIdRef_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20781:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< associatedFeatureOccurrence_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::associatedFeatureOccurrence::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:20868:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ BioXSD-1.1_xsd.cxx:20877:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< score_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ g++ -DHAVE_CONFIG_H -I. -I../lib -I../lib -I../src -I/usr/include -I/usr/include/xercesc -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o freecontact-freecontact_input_xsd.o `test -f 'freecontact_input_xsd.cxx' || echo './'`freecontact_input_xsd.cxx In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1507:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequence (::std::auto_ptr< sequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1585:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] species (::std::auto_ptr< species_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1665:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reference (::std::auto_ptr< reference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1741:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1817:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1893:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] translationData (::std::auto_ptr< translationData_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1969:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] inlineBaseQuality (::std::auto_ptr< inlineBaseQuality_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1992:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] BiosequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2105:45: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] GeneralNucleotideSequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2186:44: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] GeneralAminoacidSequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2267:38: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] NucleotideSequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2348:37: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] AminoacidSequenceRecord (::std::auto_ptr< sequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2611:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3051:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3109:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] len (::std::auto_ptr< len_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3287:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] min (::std::auto_ptr< min_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3366:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] max (::std::auto_ptr< max_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3442:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3500:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] minCertainty (::std::auto_ptr< minCertainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3567:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] maxCertainty (::std::auto_ptr< maxCertainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3877:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3935:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] bases (::std::auto_ptr< bases_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4110:36: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localAlignmentPosition (::std::auto_ptr< localAlignmentPosition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4186:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceRecord (::std::auto_ptr< sequenceRecord_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4262:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceReference (::std::auto_ptr< sequenceReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4338:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceName (::std::auto_ptr< sequenceName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4414:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] species (::std::auto_ptr< species_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4490:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] genomeBuild (::std::auto_ptr< genomeBuild_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4566:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] chromosome (::std::auto_ptr< chromosome_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4644:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4720:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantAccession (::std::auto_ptr< variantAccession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4796:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantNote (::std::auto_ptr< variantNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:5064:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reversedDirection (::std::auto_ptr< reversedDirection_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:5589:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:5798:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] className (::std::auto_ptr< className_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:5938:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] properties (::std::auto_ptr< properties_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6115:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] specificFeatureName (::std::auto_ptr< specificFeatureName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6385:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6627:36: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] appliesToWholeSequence (::std::auto_ptr< appliesToWholeSequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6703:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] position (::std::auto_ptr< position_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6843:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] occurrenceName (::std::auto_ptr< occurrenceName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6919:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] occurrenceNote (::std::auto_ptr< occurrenceNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6995:32: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] featureTypeDetails (::std::auto_ptr< featureTypeDetails_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7203:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] frame (::std::auto_ptr< frame_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7279:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] phase (::std::auto_ptr< phase_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7419:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignment (::std::auto_ptr< alignment_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7588:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] referenceSequence (::std::auto_ptr< referenceSequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7742:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] FeatureRecord (::std::auto_ptr< referenceSequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7901:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] predicted (::std::auto_ptr< predicted_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7977:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] experimental (::std::auto_ptr< experimental_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8130:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8217:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] MethodResult (::std::auto_ptr< method_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8357:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] methodIdRef (::std::auto_ptr< methodIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8444:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] Result (::std::auto_ptr< methodIdRef_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8602:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8678:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] methodIdRef (::std::auto_ptr< methodIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8818:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] verdict (::std::auto_ptr< verdict_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8973:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dataReference (::std::auto_ptr< dataReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9113:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] verdict (::std::auto_ptr< verdict_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9189:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reliability (::std::auto_ptr< reliability_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9212:34: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ExperimentalEvidence (::std::auto_ptr< dataReference_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9566:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9642:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] index (::std::auto_ptr< index_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9718:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] unit (::std::auto_ptr< unit_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9794:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9974:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] position (::std::auto_ptr< position_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10032:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] value (::std::auto_ptr< value_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10108:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10285:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10361:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10419:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10679:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10755:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10813:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11072:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] pos (::std::auto_ptr< pos_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11148:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11206:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11465:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] min (::std::auto_ptr< min_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11544:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] max (::std::auto_ptr< max_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11620:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] strand (::std::auto_ptr< strand_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11678:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] minCertainty (::std::auto_ptr< minCertainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11745:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] maxCertainty (::std::auto_ptr< maxCertainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12003:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] max (::std::auto_ptr< max_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12061:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] certainty (::std::auto_ptr< certainty_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12377:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] insertion (::std::auto_ptr< insertion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12517:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] nextPoint (::std::auto_ptr< nextPoint_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12593:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] nextPartition (::std::auto_ptr< nextPartition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12669:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] samePoint (::std::auto_ptr< samePoint_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12745:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] samePartition (::std::auto_ptr< samePartition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12821:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] outside (::std::auto_ptr< outside_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13071:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] correspondance (::std::auto_ptr< correspondance_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13211:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] insertion (::std::auto_ptr< insertion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13351:39: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] explicitSequenceReference (::std::auto_ptr< explicitSequenceReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13597:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reference (::std::auto_ptr< reference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13832:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] geneticCode (::std::auto_ptr< geneticCode_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13908:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] phase (::std::auto_ptr< phase_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13984:42: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] reversedTranslationDirection (::std::auto_ptr< reversedTranslationDirection_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14226:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dbName (::std::auto_ptr< dbName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14304:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dbUri (::std::auto_ptr< dbUri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14380:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] dbVersion (::std::auto_ptr< dbVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14511:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdl (::std::auto_ptr< wsdl_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14587:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlService (::std::auto_ptr< wsdlService_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14663:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlPort (::std::auto_ptr< wsdlPort_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14739:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceOperation (::std::auto_ptr< webserviceOperation_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14815:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceVersion (::std::auto_ptr< webserviceVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14894:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceDate (::std::auto_ptr< webserviceDate_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15075:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] accession (::std::auto_ptr< accession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15151:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] entryUri (::std::auto_ptr< entryUri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15227:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] entryVersion (::std::auto_ptr< entryVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15305:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] date (::std::auto_ptr< date_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15481:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyName (::std::auto_ptr< ontologyName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15559:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyUri (::std::auto_ptr< ontologyUri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15635:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyVersion (::std::auto_ptr< ontologyVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15870:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] accession (::std::auto_ptr< accession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15946:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] conceptUri (::std::auto_ptr< conceptUri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16028:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] term (::std::auto_ptr< term_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16207:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] speciesName (::std::auto_ptr< speciesName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16283:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] speciesNote (::std::auto_ptr< speciesNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16459:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16538:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] supersequence (::std::auto_ptr< supersequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16617:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] supersequenceName (::std::auto_ptr< supersequenceName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16693:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceVersion (::std::auto_ptr< sequenceVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16769:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantAccession (::std::auto_ptr< variantAccession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16845:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantNote (::std::auto_ptr< variantNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17130:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] name (::std::auto_ptr< name_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17206:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] uri (::std::auto_ptr< uri_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17282:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] version (::std::auto_ptr< version_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17358:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] date (::std::auto_ptr< date_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17434:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdl (::std::auto_ptr< wsdl_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17510:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlService (::std::auto_ptr< wsdlService_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17586:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] wsdlPort (::std::auto_ptr< wsdlPort_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17662:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceOperation (::std::auto_ptr< webserviceOperation_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17738:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceVersion (::std::auto_ptr< webserviceVersion_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17817:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] webserviceDate (::std::auto_ptr< webserviceDate_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:22916:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] relationName (::std::auto_ptr< relationName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:23505:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] canonicalVariant (::std::auto_ptr< canonicalVariant_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:23645:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] missing (::std::auto_ptr< missing_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:23787:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] position (::std::auto_ptr< position_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:23961:34: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignmentOfReference (::std::auto_ptr< alignmentOfReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24019:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignedSequence (::std::auto_ptr< alignedSequence_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24042:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] alignment (::std::auto_ptr< alignedSequence_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24200:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceRecord (::std::auto_ptr< sequenceRecord_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24276:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceReference (::std::auto_ptr< sequenceReference_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24352:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] sequenceName (::std::auto_ptr< sequenceName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24428:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] species (::std::auto_ptr< species_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24504:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] genomeBuild (::std::auto_ptr< genomeBuild_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24580:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] chromosome (::std::auto_ptr< chromosome_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24658:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24734:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantAccession (::std::auto_ptr< variantAccession_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24810:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] variantNote (::std::auto_ptr< variantNote_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24970:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] feature (::std::auto_ptr< feature_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:25046:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] condensedReferences (::std::auto_ptr< condensedReferences_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:25133:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] annotation (::std::auto_ptr< feature_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:25778:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:25932:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] code (::std::auto_ptr< code_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26122:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] aminoacid (::std::auto_ptr< aminoacid_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26253:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] note (::std::auto_ptr< note_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26781:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26857:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontology (::std::auto_ptr< ontology_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26933:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] database (::std::auto_ptr< database_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27009:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreType (::std::auto_ptr< scoreType_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27164:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27316:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27468:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27620:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27773:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27925:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] feature (::std::auto_ptr< feature_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28001:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] condensedReferences (::std::auto_ptr< condensedReferences_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28088:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] annotation1 (::std::auto_ptr< feature_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28471:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] method (::std::auto_ptr< method_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28547:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] methodIdRef (::std::auto_ptr< methodIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28623:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontology (::std::auto_ptr< ontology_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28699:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ontologyIdRef (::std::auto_ptr< ontologyIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28775:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] database (::std::auto_ptr< database_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28851:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] databaseIdRef (::std::auto_ptr< databaseIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28927:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreType (::std::auto_ptr< scoreType_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:29003:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:29244:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localId (::std::auto_ptr< localId_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:29415:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] relationName (::std::auto_ptr< relationName_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646:0, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:29826:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] localIdRef (::std::auto_ptr< localIdRef_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41:0: freecontact_input_xsd.hxx:723:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] flat (::std::auto_ptr< flat_type > p); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41:0: freecontact_input_xsd.hxx:746:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] FcAlignment (::std::auto_ptr< flat_type >); ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41:0: freecontact_input_xsd.hxx:847:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41:0: freecontact_input_xsd.hxx:863:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41:0: freecontact_input_xsd.hxx:881:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41:0: freecontact_input_xsd.hxx:897:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41:0: freecontact_input_xsd.hxx:913:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41:0: freecontact_input_xsd.hxx:931:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41:0: freecontact_input_xsd.hxx:951:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41:0: freecontact_input_xsd.hxx:973:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41:0: freecontact_input_xsd.hxx:996:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41:0: freecontact_input_xsd.hxx:1013:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41:0: freecontact_input_xsd.hxx:1029:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41:0: freecontact_input_xsd.hxx:1047:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41:0: freecontact_input_xsd.hxx:1061:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41:0: freecontact_input_xsd.hxx:1078:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx:67:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] flat (::std::auto_ptr< flat_type > x) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx:97:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] FcAlignment (::std::auto_ptr< flat_type > flat) ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx: In member function ‘void freecontact_input_xsd::FcAlignment::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: freecontact_input_xsd.cxx:139:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx:150:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< flat_type > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx: At global scope: freecontact_input_xsd.cxx:212:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx: In function ‘std::auto_ptr freecontact_input_xsd::alignment(const string&, xml_schema::flags, const properties&)’: freecontact_input_xsd.cxx:229:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx: At global scope: freecontact_input_xsd.cxx:234:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx: In function ‘std::auto_ptr freecontact_input_xsd::alignment(const string&, xml_schema::error_handler&, xml_schema::flags, const properties&)’: freecontact_input_xsd.cxx:251:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx: At global scope: freecontact_input_xsd.cxx:256:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx: In function ‘std::auto_ptr freecontact_input_xsd::alignment(const string&, xercesc_3_1::DOMErrorHandler&, xml_schema::flags, const properties&)’: freecontact_input_xsd.cxx:269:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx: At global scope: freecontact_input_xsd.cxx:274:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx:287:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx:301:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx:311:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx:325:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx:340:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx:351:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx: In function ‘std::auto_ptr freecontact_input_xsd::alignment(xercesc_3_1::InputSource&, xml_schema::flags, const properties&)’: freecontact_input_xsd.cxx:364:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx: At global scope: freecontact_input_xsd.cxx:369:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx: In function ‘std::auto_ptr freecontact_input_xsd::alignment(xercesc_3_1::InputSource&, xml_schema::error_handler&, xml_schema::flags, const properties&)’: freecontact_input_xsd.cxx:382:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx: At global scope: freecontact_input_xsd.cxx:387:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx: In function ‘std::auto_ptr freecontact_input_xsd::alignment(xercesc_3_1::InputSource&, xercesc_3_1::DOMErrorHandler&, xml_schema::flags, const properties&)’: freecontact_input_xsd.cxx:400:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx: At global scope: freecontact_input_xsd.cxx:405:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx: In function ‘std::auto_ptr freecontact_input_xsd::alignment(const xercesc_3_1::DOMDocument&, xml_schema::flags, const properties&)’: freecontact_input_xsd.cxx:415:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx:424:12: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx:433:14: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx: At global scope: freecontact_input_xsd.cxx:451:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx: In function ‘std::auto_ptr freecontact_input_xsd::alignment(xsd::cxx::xml::dom::auto_ptr, xml_schema::flags, const properties&)’: freecontact_input_xsd.cxx:473:12: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ freecontact_input_xsd.cxx:483:14: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > r ( ^~~~~~~~ In file included from /usr/include/c++/7/memory:80:0, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here template class auto_ptr; ^~~~~~~~ /bin/bash ../libtool --tag=CXX --mode=link g++ -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -L/usr/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o freecontact freecontact-freecontact.o freecontact-_write_bioxsd.o freecontact-freecontact_input_xsd.o freecontact-freecontact_output_xsd.o freecontact-BioXSD-1.1_xsd.o -lboost_program_options -lxerces-c ../lib/libfreecontact.la libtool: link: g++ -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o .libs/freecontact freecontact-freecontact.o freecontact-_write_bioxsd.o freecontact-freecontact_input_xsd.o freecontact-freecontact_output_xsd.o freecontact-BioXSD-1.1_xsd.o -L/usr/lib -lboost_program_options -lxerces-c ../lib/.libs/libfreecontact.so -pthread -fopenmp make[2]: Leaving directory '/<>/src' make[2]: Entering directory '/<>' make[2]: Nothing to be done for 'all-am'. make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_auto_test -a -O--parallel make -j4 check VERBOSE=1 make[1]: Entering directory '/<>' Making check in lib make[2]: Entering directory '/<>/lib' make[2]: Leaving directory '/<>/lib' Making check in src make[2]: Entering directory '/<>/src' make test_freecontact make[3]: Entering directory '/<>/src' make[3]: Nothing to be done for 'test_freecontact'. make[3]: Leaving directory '/<>/src' make check-TESTS make[3]: Entering directory '/<>/src' make[4]: Entering directory '/<>/src' PASS: test_freecontact ============================================================================ Testsuite summary for freecontact 1.0.21 ============================================================================ # TOTAL: 1 # PASS: 1 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' make[2]: Leaving directory '/<>/src' make[2]: Entering directory '/<>' make[2]: Nothing to be done for 'check-am'. make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' fakeroot debian/rules binary-arch dh binary-arch --parallel --with bash-completion --with autoreconf dh_testroot -a -O--parallel dh_prep -a -O--parallel dh_auto_install -a -O--parallel make -j1 install DESTDIR=/<>/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' Making install in lib make[2]: Entering directory '/<>/lib' make[3]: Entering directory '/<>/lib' /bin/mkdir -p '/<>/debian/tmp/usr/lib/arm-linux-gnueabihf' /bin/bash ../libtool --mode=install /usr/bin/install -c libfreecontact.la '/<>/debian/tmp/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/libfreecontact.so.0.0.0 /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/libfreecontact.so.0.0.0 libtool: install: (cd /<>/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libfreecontact.so.0.0.0 libfreecontact.so.0 || { rm -f libfreecontact.so.0 && ln -s libfreecontact.so.0.0.0 libfreecontact.so.0; }; }) libtool: install: (cd /<>/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libfreecontact.so.0.0.0 libfreecontact.so || { rm -f libfreecontact.so && ln -s libfreecontact.so.0.0.0 libfreecontact.so; }; }) libtool: install: /usr/bin/install -c .libs/libfreecontact.lai /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/libfreecontact.la libtool: install: /usr/bin/install -c .libs/libfreecontact.a /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/libfreecontact.a libtool: install: chmod 644 /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/libfreecontact.a libtool: install: ranlib /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/libfreecontact.a libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf' /bin/mkdir -p '/<>/debian/tmp/usr/include' /usr/bin/install -c -m 644 freecontact.h '/<>/debian/tmp/usr/include' make[3]: Leaving directory '/<>/lib' make[2]: Leaving directory '/<>/lib' Making install in src make[2]: Entering directory '/<>/src' make[3]: Entering directory '/<>/src' /bin/mkdir -p '/<>/debian/tmp/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c freecontact '/<>/debian/tmp/usr/bin' libtool: warning: '../lib/libfreecontact.la' has not been installed in '/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/freecontact /<>/debian/tmp/usr/bin/freecontact /bin/mkdir -p '/<>/debian/tmp/usr/share/doc/freecontact/examples' /usr/bin/install -c -m 644 demo_1000.aln demo_1000.psicov.50 PF00071_v25_999.fa PF00071_v25_999.xml PF00071_v25_999.evfold.50 PF00071_v25_999.evfold.50.xml '/<>/debian/tmp/usr/share/doc/freecontact/examples' /bin/mkdir -p '/<>/debian/tmp/usr/share/freecontact' /usr/bin/install -c -m 644 BioXSD-1.1.xsd freecontact_input.xsd freecontact_output.xsd '/<>/debian/tmp/usr/share/freecontact' /bin/mkdir -p '/<>/debian/tmp/usr/share/freecontact' /usr/bin/install -c a2m2aln '/<>/debian/tmp/usr/share/freecontact' /bin/mkdir -p '/<>/debian/tmp/usr/share/man/man1' /usr/bin/install -c -m 644 freecontact.1 '/<>/debian/tmp/usr/share/man/man1' make[3]: Leaving directory '/<>/src' make[2]: Leaving directory '/<>/src' make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install d-shlibmove --commit \ --multiarch \ --exclude-la \ --devunversioned \ --override s/libblas3-dev/libblas-dev/ \ --v5 \ --override s/libgfortran3-dev/libgfortran-6-dev/ \ --override s/libquadmath0-dev/libgcc-6-dev/ \ --override s/liblapack3-dev/liblapack-dev/ \ --movedev debian/tmp/usr/include/* usr/include \ debian/tmp/usr/lib/*/*.so Library package automatic movement utility --> libblas-dev package exists. devlibs error: There is no package matching [libgfortran4-dev] and noone provides it, please report bug to d-shlibs maintainer --> liblapack-dev package exists. debian/rules:29: recipe for target 'override_dh_install' failed make[1]: *** [override_dh_install] Error 1 make[1]: Leaving directory '/<>' debian/rules:11: recipe for target 'binary-arch' failed make: *** [binary-arch] Error 2 dpkg-buildpackage: error: fakeroot debian/rules binary-arch gave error exit status 2 -------------------------------------------------------------------------------- Build finished at 20170804-2042 Finished -------- E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Not removing build depends: as requested Keeping session: +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: armhf Build-Space: 70520 Build-Time: 414 Distribution: artful-proposed Fail-Stage: build Host Architecture: armhf Install-Time: 81 Job: freecontact_1.0.21-5build1.dsc Machine Architecture: arm64 Package: freecontact Package-Time: 499 Source-Version: 1.0.21-5build1 Space: 70520 Status: attempted Version: 1.0.21-5build1 -------------------------------------------------------------------------------- Finished at 20170804-2042 Build needed 00:08:19, 70520k disc space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['scan-for-processes', 'PACKAGEBUILD-13199385'] Scanning for processes to kill in build /home/buildd/build-PACKAGEBUILD-13199385/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', 'PACKAGEBUILD-13199385'] Unmounting chroot for build PACKAGEBUILD-13199385... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', 'PACKAGEBUILD-13199385'] Removing build PACKAGEBUILD-13199385