https://launchpad.net/ubuntu/+source/freecontact/1.0.21-7build1/+build/18651704 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-arm64-034 4.4.0-173-generic #203-Ubuntu SMP Wed Jan 15 02:56:55 UTC 2020 aarch64 Buildd toolchain package versions: launchpad-buildd_186 python-lpbuildd_186 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.7 dpkg-dev_1.18.4ubuntu1.6 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 3 Feb 23:36:34 ntpdate[1881]: adjust time server 10.211.37.1 offset 0.000011 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=focal --arch=armhf PACKAGEBUILD-18651704 --image-type chroot /home/buildd/filecache-default/f005b6164729459c78307140747b338a2f357aa2 Creating target for build PACKAGEBUILD-18651704 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=focal --arch=armhf PACKAGEBUILD-18651704 Starting target for build PACKAGEBUILD-18651704 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=focal --arch=armhf PACKAGEBUILD-18651704 'deb http://ftpmaster.internal/ubuntu focal main universe' 'deb http://ftpmaster.internal/ubuntu focal-security main universe' 'deb http://ftpmaster.internal/ubuntu focal-updates main universe' 'deb http://ftpmaster.internal/ubuntu focal-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-18651704 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=focal --arch=armhf PACKAGEBUILD-18651704 Updating target for build PACKAGEBUILD-18651704 Get:1 http://ftpmaster.internal/ubuntu focal InRelease [255 kB] Get:2 http://ftpmaster.internal/ubuntu focal-security InRelease [79.7 kB] Get:3 http://ftpmaster.internal/ubuntu focal-updates InRelease [79.7 kB] Get:4 http://ftpmaster.internal/ubuntu focal-proposed InRelease [255 kB] Get:5 http://ftpmaster.internal/ubuntu focal/main armhf Packages [937 kB] Get:6 http://ftpmaster.internal/ubuntu focal/main Translation-en [503 kB] Get:7 http://ftpmaster.internal/ubuntu focal/universe armhf Packages [8330 kB] Get:8 http://ftpmaster.internal/ubuntu focal/universe Translation-en [5146 kB] Get:9 http://ftpmaster.internal/ubuntu focal-proposed/main armhf Packages [113 kB] Get:10 http://ftpmaster.internal/ubuntu focal-proposed/main Translation-en [56.9 kB] Get:11 http://ftpmaster.internal/ubuntu focal-proposed/universe armhf Packages [496 kB] Get:12 http://ftpmaster.internal/ubuntu focal-proposed/universe Translation-en [279 kB] Fetched 16.5 MB in 7s (2344 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libffi6 libhogweed4 libisl21 libnettle6 libperl5.28 perl-modules-5.28 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: gcc-10-base libctf-nobfd0 libctf0 libffi7 libgcc-s1 libhogweed5 libisl22 libnettle7 libperl5.30 perl-modules-5.30 The following packages will be upgraded: apt base-files base-passwd bash binutils binutils-arm-linux-gnueabihf binutils-common bsdutils bzip2 cpp-9 debianutils e2fsprogs fdisk g++-9 gcc-9 gcc-9-base gpg gpg-agent gpgconf gpgv grep gzip hostname libacl1 libapparmor1 libapt-pkg5.90 libasan5 libassuan0 libatomic1 libattr1 libaudit-common libaudit1 libbinutils libblkid1 libbz2-1.0 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcom-err2 libcryptsetup12 libdebconfclient0 libdevmapper1.02.1 libext2fs2 libfdisk1 libgcc-9-dev libgcc1 libgcrypt20 libgmp10 libgnutls30 libgomp1 libgpg-error0 libjson-c4 libkmod2 liblockfile-bin liblockfile1 liblz4-1 libmount1 libncurses6 libncursesw6 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpcre2-8-0 libseccomp2 libselinux1 libsemanage-common libsemanage1 libsepol1 libsmartcols1 libsqlite3-0 libss2 libssl1.1 libstdc++-9-dev libstdc++6 libsystemd0 libtasn1-6 libtinfo6 libubsan1 libudev1 libuuid1 libzstd1 linux-libc-dev login logsave lsb-base mount ncurses-base ncurses-bin openssl passwd perl perl-base sensible-utils systemd systemd-sysv sysvinit-utils util-linux 103 upgraded, 10 newly installed, 0 to remove and 0 not upgraded. Need to get 56.7 MB of archives. After this operation, 37.8 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu focal/main armhf libc6-dev armhf 2.30-0ubuntu3 [1943 kB] Get:2 http://ftpmaster.internal/ubuntu focal/main armhf libc-dev-bin armhf 2.30-0ubuntu3 [63.6 kB] Get:3 http://ftpmaster.internal/ubuntu focal-proposed/main armhf linux-libc-dev armhf 5.4.0-13.16 [1111 kB] Get:4 http://ftpmaster.internal/ubuntu focal/main armhf gcc-10-base armhf 10-20200202-1ubuntu1 [18.7 kB] Get:5 http://ftpmaster.internal/ubuntu focal/main armhf libgcc-s1 armhf 10-20200202-1ubuntu1 [36.4 kB] Get:6 http://ftpmaster.internal/ubuntu focal/main armhf libgcc1 armhf 1:10-20200202-1ubuntu1 [36.3 kB] Get:7 http://ftpmaster.internal/ubuntu focal/main armhf libc6 armhf 2.30-0ubuntu3 [2144 kB] Get:8 http://ftpmaster.internal/ubuntu focal/main armhf base-files armhf 11ubuntu2 [59.8 kB] Get:9 http://ftpmaster.internal/ubuntu focal/main armhf debianutils armhf 4.9.1 [84.6 kB] Get:10 http://ftpmaster.internal/ubuntu focal/main armhf bash armhf 5.0-5ubuntu1 [576 kB] Get:11 http://ftpmaster.internal/ubuntu focal/main armhf bsdutils armhf 1:2.34-0.1ubuntu5 [58.3 kB] Get:12 http://ftpmaster.internal/ubuntu focal/main armhf grep armhf 3.4-1 [141 kB] Get:13 http://ftpmaster.internal/ubuntu focal/main armhf gzip armhf 1.10-0ubuntu4 [91.1 kB] Get:14 http://ftpmaster.internal/ubuntu focal/main armhf hostname armhf 3.23 [10.4 kB] Get:15 http://ftpmaster.internal/ubuntu focal/main armhf login armhf 1:4.8-1ubuntu1 [217 kB] Get:16 http://ftpmaster.internal/ubuntu focal/main armhf ncurses-bin armhf 6.1+20191019-1ubuntu1 [163 kB] Get:17 http://ftpmaster.internal/ubuntu focal/main armhf perl-modules-5.30 all 5.30.0-9 [2739 kB] Get:18 http://ftpmaster.internal/ubuntu focal/main armhf libperl5.30 armhf 5.30.0-9 [3286 kB] Get:19 http://ftpmaster.internal/ubuntu focal/main armhf perl armhf 5.30.0-9 [224 kB] Get:20 http://ftpmaster.internal/ubuntu focal/main armhf perl-base armhf 5.30.0-9 [1408 kB] Get:21 http://ftpmaster.internal/ubuntu focal/main armhf bzip2 armhf 1.0.8-2 [32.4 kB] Get:22 http://ftpmaster.internal/ubuntu focal/main armhf libbz2-1.0 armhf 1.0.8-2 [31.0 kB] Get:23 http://ftpmaster.internal/ubuntu focal/main armhf libblkid1 armhf 2.34-0.1ubuntu5 [125 kB] Get:24 http://ftpmaster.internal/ubuntu focal/main armhf libuuid1 armhf 2.34-0.1ubuntu5 [19.7 kB] Get:25 http://ftpmaster.internal/ubuntu focal/main armhf libfdisk1 armhf 2.34-0.1ubuntu5 [163 kB] Get:26 http://ftpmaster.internal/ubuntu focal/main armhf libpcre2-8-0 armhf 10.34-7 [172 kB] Get:27 http://ftpmaster.internal/ubuntu focal/main armhf libselinux1 armhf 3.0-1 [60.1 kB] Get:28 http://ftpmaster.internal/ubuntu focal/main armhf libmount1 armhf 2.34-0.1ubuntu5 [135 kB] Get:29 http://ftpmaster.internal/ubuntu focal/main armhf libncurses6 armhf 6.1+20191019-1ubuntu1 [79.7 kB] Get:30 http://ftpmaster.internal/ubuntu focal/main armhf libtinfo6 armhf 6.1+20191019-1ubuntu1 [72.8 kB] Get:31 http://ftpmaster.internal/ubuntu focal/main armhf libncursesw6 armhf 6.1+20191019-1ubuntu1 [106 kB] Get:32 http://ftpmaster.internal/ubuntu focal/main armhf libsmartcols1 armhf 2.34-0.1ubuntu5 [89.1 kB] Get:33 http://ftpmaster.internal/ubuntu focal/main armhf fdisk armhf 2.34-0.1ubuntu5 [109 kB] Get:34 http://ftpmaster.internal/ubuntu focal/main armhf util-linux armhf 2.34-0.1ubuntu5 [957 kB] Get:35 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libdebconfclient0 armhf 0.251ubuntu1 [5592 B] Get:36 http://ftpmaster.internal/ubuntu focal/main armhf base-passwd armhf 3.5.47 [46.4 kB] Get:37 http://ftpmaster.internal/ubuntu focal/main armhf libc-bin armhf 2.30-0ubuntu3 [496 kB] Get:38 http://ftpmaster.internal/ubuntu focal/main armhf ncurses-base all 6.1+20191019-1ubuntu1 [17.9 kB] Get:39 http://ftpmaster.internal/ubuntu focal/main armhf lsb-base all 11.1.0ubuntu2 [12.1 kB] Get:40 http://ftpmaster.internal/ubuntu focal/main armhf sysvinit-utils armhf 2.96-1ubuntu1 [19.2 kB] Get:41 http://ftpmaster.internal/ubuntu focal/main armhf libgpg-error0 armhf 1.36-7ubuntu1 [49.8 kB] Get:42 http://ftpmaster.internal/ubuntu focal/main armhf libgcrypt20 armhf 1.8.5-3ubuntu1 [364 kB] Get:43 http://ftpmaster.internal/ubuntu focal/main armhf liblz4-1 armhf 1.9.2-2 [51.7 kB] Get:44 http://ftpmaster.internal/ubuntu focal/main armhf libstdc++6 armhf 10-20200202-1ubuntu1 [442 kB] Get:45 http://ftpmaster.internal/ubuntu focal/main armhf systemd-sysv armhf 244.1-0ubuntu2 [9364 B] Get:46 http://ftpmaster.internal/ubuntu focal/main armhf libacl1 armhf 2.2.53-5ubuntu1 [15.8 kB] Get:47 http://ftpmaster.internal/ubuntu focal/main armhf libapparmor1 armhf 2.13.3-7ubuntu1 [29.4 kB] Get:48 http://ftpmaster.internal/ubuntu focal/main armhf libaudit-common all 1:2.8.5-2ubuntu5 [4076 B] Get:49 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libcap-ng0 armhf 0.7.9-2.1build1 [9688 B] Get:50 http://ftpmaster.internal/ubuntu focal/main armhf libaudit1 armhf 1:2.8.5-2ubuntu5 [35.9 kB] Get:51 http://ftpmaster.internal/ubuntu focal/main armhf libcap2 armhf 1:2.27-1 [12.7 kB] Get:52 http://ftpmaster.internal/ubuntu focal/main armhf libudev1 armhf 244.1-0ubuntu2 [69.1 kB] Get:53 http://ftpmaster.internal/ubuntu focal/main armhf libdevmapper1.02.1 armhf 2:1.02.155-2ubuntu8 [118 kB] Get:54 http://ftpmaster.internal/ubuntu focal/main armhf libjson-c4 armhf 0.13.1+dfsg-6 [25.6 kB] Get:55 http://ftpmaster.internal/ubuntu focal/main armhf libssl1.1 armhf 1.1.1d-2ubuntu3 [1080 kB] Get:56 http://ftpmaster.internal/ubuntu focal/main armhf libcryptsetup12 armhf 2:2.2.2-2ubuntu1 [163 kB] Get:57 http://ftpmaster.internal/ubuntu focal/main armhf libnettle7 armhf 3.5.1+really3.5.1-2 [126 kB] Get:58 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libgmp10 armhf 2:6.2.0+dfsg-3 [192 kB] Get:59 http://ftpmaster.internal/ubuntu focal/main armhf libhogweed5 armhf 3.5.1+really3.5.1-2 [127 kB] Get:60 http://ftpmaster.internal/ubuntu focal/main armhf libffi7 armhf 3.3-3 [16.5 kB] Get:61 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libp11-kit0 armhf 0.23.20-1 [167 kB] Get:62 http://ftpmaster.internal/ubuntu focal/main armhf libtasn1-6 armhf 4.15.0-2 [33.0 kB] Get:63 http://ftpmaster.internal/ubuntu focal/main armhf libgnutls30 armhf 3.6.11.1-2ubuntu2 [733 kB] Get:64 http://ftpmaster.internal/ubuntu focal/main armhf libkmod2 armhf 26-3ubuntu1 [37.0 kB] Get:65 http://ftpmaster.internal/ubuntu focal/main armhf libpam0g armhf 1.3.1-5ubuntu4 [49.6 kB] Get:66 http://ftpmaster.internal/ubuntu focal/main armhf libseccomp2 armhf 2.4.2-2ubuntu2 [32.5 kB] Get:67 http://ftpmaster.internal/ubuntu focal/main armhf mount armhf 2.34-0.1ubuntu5 [108 kB] Get:68 http://ftpmaster.internal/ubuntu focal/main armhf systemd armhf 244.1-0ubuntu2 [3533 kB] Get:69 http://ftpmaster.internal/ubuntu focal/main armhf libsystemd0 armhf 244.1-0ubuntu2 [240 kB] Get:70 http://ftpmaster.internal/ubuntu focal/main armhf libzstd1 armhf 1.4.4+dfsg-1 [207 kB] Get:71 http://ftpmaster.internal/ubuntu focal/main armhf libapt-pkg5.90 armhf 1.9.8 [774 kB] Get:72 http://ftpmaster.internal/ubuntu focal/main armhf gpgv armhf 2.2.17-3ubuntu1 [170 kB] Get:73 http://ftpmaster.internal/ubuntu focal/main armhf apt armhf 1.9.8 [1236 kB] Get:74 http://ftpmaster.internal/ubuntu focal/main armhf libpam-modules-bin armhf 1.3.1-5ubuntu4 [33.8 kB] Get:75 http://ftpmaster.internal/ubuntu focal/main armhf libpam-modules armhf 1.3.1-5ubuntu4 [232 kB] Get:76 http://ftpmaster.internal/ubuntu focal/main armhf logsave armhf 1.45.3-4ubuntu3 [9172 B] Get:77 http://ftpmaster.internal/ubuntu focal/main armhf libext2fs2 armhf 1.45.3-4ubuntu3 [168 kB] Get:78 http://ftpmaster.internal/ubuntu focal/main armhf e2fsprogs armhf 1.45.3-4ubuntu3 [506 kB] Get:79 http://ftpmaster.internal/ubuntu focal/main armhf libattr1 armhf 1:2.4.48-5 [11.5 kB] Get:80 http://ftpmaster.internal/ubuntu focal/main armhf libpam-runtime all 1.3.1-5ubuntu4 [37.3 kB] Get:81 http://ftpmaster.internal/ubuntu focal/main armhf libsepol1 armhf 3.0-1 [220 kB] Get:82 http://ftpmaster.internal/ubuntu focal/main armhf libsemanage-common all 3.0-1 [9880 B] Get:83 http://ftpmaster.internal/ubuntu focal/main armhf libsemanage1 armhf 3.0-1 [73.9 kB] Get:84 http://ftpmaster.internal/ubuntu focal/main armhf passwd armhf 1:4.8-1ubuntu1 [748 kB] Get:85 http://ftpmaster.internal/ubuntu focal/main armhf libgomp1 armhf 10-20200202-1ubuntu1 [86.8 kB] Get:86 http://ftpmaster.internal/ubuntu focal/main armhf libatomic1 armhf 10-20200202-1ubuntu1 [7276 B] Get:87 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libasan5 armhf 9.2.1-26ubuntu3 [387 kB] Get:88 http://ftpmaster.internal/ubuntu focal/main armhf libubsan1 armhf 10-20200202-1ubuntu1 [121 kB] Get:89 http://ftpmaster.internal/ubuntu focal-proposed/main armhf g++-9 armhf 9.2.1-26ubuntu3 [6685 kB] Get:90 http://ftpmaster.internal/ubuntu focal-proposed/main armhf gcc-9 armhf 9.2.1-26ubuntu3 [6537 kB] Get:91 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libstdc++-9-dev armhf 9.2.1-26ubuntu3 [1778 kB] Get:92 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libgcc-9-dev armhf 9.2.1-26ubuntu3 [687 kB] Get:93 http://ftpmaster.internal/ubuntu focal/main armhf libisl22 armhf 0.22-2 [460 kB] Get:94 http://ftpmaster.internal/ubuntu focal/main armhf libcc1-0 armhf 10-20200202-1ubuntu1 [34.5 kB] Get:95 http://ftpmaster.internal/ubuntu focal/main armhf binutils-arm-linux-gnueabihf armhf 2.34-1ubuntu1 [2093 kB] Get:96 http://ftpmaster.internal/ubuntu focal/main armhf libbinutils armhf 2.34-1ubuntu1 [319 kB] Get:97 http://ftpmaster.internal/ubuntu focal/main armhf binutils armhf 2.34-1ubuntu1 [3368 B] Get:98 http://ftpmaster.internal/ubuntu focal/main armhf binutils-common armhf 2.34-1ubuntu1 [206 kB] Get:99 http://ftpmaster.internal/ubuntu focal/main armhf libctf-nobfd0 armhf 2.34-1ubuntu1 [37.3 kB] Get:100 http://ftpmaster.internal/ubuntu focal/main armhf libctf0 armhf 2.34-1ubuntu1 [37.0 kB] Get:101 http://ftpmaster.internal/ubuntu focal-proposed/main armhf cpp-9 armhf 9.2.1-26ubuntu3 [5876 kB] Get:102 http://ftpmaster.internal/ubuntu focal-proposed/main armhf gcc-9-base armhf 9.2.1-26ubuntu3 [19.0 kB] Get:103 http://ftpmaster.internal/ubuntu focal/main armhf libcom-err2 armhf 1.45.3-4ubuntu3 [8164 B] Get:104 http://ftpmaster.internal/ubuntu focal/main armhf libss2 armhf 1.45.3-4ubuntu3 [9384 B] Get:105 http://ftpmaster.internal/ubuntu focal/main armhf sensible-utils all 0.0.12+nmu1 [15.0 kB] Get:106 http://ftpmaster.internal/ubuntu focal-proposed/main armhf libsqlite3-0 armhf 3.31.1-1 [467 kB] Get:107 http://ftpmaster.internal/ubuntu focal/main armhf openssl armhf 1.1.1d-2ubuntu3 [595 kB] Get:108 http://ftpmaster.internal/ubuntu focal/main armhf libassuan0 armhf 2.5.3-7ubuntu2 [29.1 kB] Get:109 http://ftpmaster.internal/ubuntu focal/main armhf gpg armhf 2.2.17-3ubuntu1 [421 kB] Get:110 http://ftpmaster.internal/ubuntu focal/main armhf gpgconf armhf 2.2.17-3ubuntu1 [107 kB] Get:111 http://ftpmaster.internal/ubuntu focal/main armhf gpg-agent armhf 2.2.17-3ubuntu1 [195 kB] Get:112 http://ftpmaster.internal/ubuntu focal/main armhf liblockfile-bin armhf 1.16-1.1 [10.5 kB] Get:113 http://ftpmaster.internal/ubuntu focal/main armhf liblockfile1 armhf 1.16-1.1 [5620 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 56.7 MB in 2s (24.7 MB/s) (Reading database ... 12487 files and directories currently installed.) Preparing to unpack .../libc6-dev_2.30-0ubuntu3_armhf.deb ... Unpacking libc6-dev:armhf (2.30-0ubuntu3) over (2.30-0ubuntu2) ... Preparing to unpack .../libc-dev-bin_2.30-0ubuntu3_armhf.deb ... Unpacking libc-dev-bin (2.30-0ubuntu3) over (2.30-0ubuntu2) ... Preparing to unpack .../linux-libc-dev_5.4.0-13.16_armhf.deb ... Unpacking linux-libc-dev:armhf (5.4.0-13.16) over (5.3.0-18.19) ... Selecting previously unselected package gcc-10-base:armhf. Preparing to unpack .../gcc-10-base_10-20200202-1ubuntu1_armhf.deb ... Unpacking gcc-10-base:armhf (10-20200202-1ubuntu1) ... Setting up gcc-10-base:armhf (10-20200202-1ubuntu1) ... Selecting previously unselected package libgcc-s1:armhf. (Reading database ... 12497 files and directories currently installed.) Preparing to unpack .../libgcc-s1_10-20200202-1ubuntu1_armhf.deb ... Unpacking libgcc-s1:armhf (10-20200202-1ubuntu1) ... Setting up libgcc-s1:armhf (10-20200202-1ubuntu1) ... 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Setting up libisl22:armhf (0.22-2) ... Setting up liblockfile1:armhf (1.16-1.1) ... Setting up libjson-c4:armhf (0.13.1+dfsg-6) ... Setting up libbinutils:armhf (2.34-1ubuntu1) ... Setting up libc-dev-bin (2.30-0ubuntu3) ... Setting up openssl (1.1.1d-2ubuntu3) ... Setting up libcc1-0:armhf (10-20200202-1ubuntu1) ... Setting up gpg (2.2.17-3ubuntu1) ... Setting up libkmod2:armhf (26-3ubuntu1) ... Setting up gcc-9-base:armhf (9.2.1-26ubuntu3) ... Setting up libctf0:armhf (2.34-1ubuntu1) ... Setting up gpg-agent (2.2.17-3ubuntu1) ... Installing new version of config file /etc/logcheck/ignore.d.server/gpg-agent ... Created symlink /etc/systemd/user/sockets.target.wants/gpg-agent-browser.socket -> /usr/lib/systemd/user/gpg-agent-browser.socket. Created symlink /etc/systemd/user/sockets.target.wants/gpg-agent-extra.socket -> /usr/lib/systemd/user/gpg-agent-extra.socket. Created symlink /etc/systemd/user/sockets.target.wants/gpg-agent-ssh.socket -> /usr/lib/systemd/user/gpg-agent-ssh.socket. Created symlink /etc/systemd/user/sockets.target.wants/gpg-agent.socket -> /usr/lib/systemd/user/gpg-agent.socket. Setting up e2fsprogs (1.45.3-4ubuntu3) ... Setting up libasan5:armhf (9.2.1-26ubuntu3) ... Setting up perl (5.30.0-9) ... Setting up cpp-9 (9.2.1-26ubuntu3) ... Setting up libc6-dev:armhf (2.30-0ubuntu3) ... Setting up libcryptsetup12:armhf (2:2.2.2-2ubuntu1) ... Setting up binutils-arm-linux-gnueabihf (2.34-1ubuntu1) ... Setting up systemd (244.1-0ubuntu2) ... Installing new version of config file /etc/dhcp/dhclient-enter-hooks.d/resolved ... Installing new version of config file /etc/systemd/networkd.conf ... Installing new version of config file /etc/systemd/system.conf ... Installing new version of config file /etc/systemd/user.conf ... Initializing machine ID from KVM UUID. Setting up binutils (2.34-1ubuntu1) ... Setting up libgcc-9-dev:armhf (9.2.1-26ubuntu3) ... Setting up gcc-9 (9.2.1-26ubuntu3) ... Setting up systemd-sysv (244.1-0ubuntu2) ... Setting up libstdc++-9-dev:armhf (9.2.1-26ubuntu3) ... Setting up g++-9 (9.2.1-26ubuntu3) ... Processing triggers for libc-bin (2.30-0ubuntu3) ... RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-18651704 armhf focal-proposed -c chroot:build-PACKAGEBUILD-18651704 --arch=armhf --dist=focal-proposed --nolog freecontact_1.0.21-7build1.dsc Initiating build PACKAGEBUILD-18651704 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-173-generic #203-Ubuntu SMP Wed Jan 15 02:56:55 UTC 2020 armv7l sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on bos02-arm64-034.buildd +==============================================================================+ | freecontact 1.0.21-7build1 (armhf) 03 Feb 2020 23:37 | +==============================================================================+ Package: freecontact Version: 1.0.21-7build1 Source Version: 1.0.21-7build1 Distribution: focal-proposed Machine Architecture: arm64 Host Architecture: armhf Build Architecture: armhf I: NOTICE: Log filtering will replace 'build/freecontact-evYk0D/freecontact-1.0.21' with '<>' I: NOTICE: Log filtering will replace 'build/freecontact-evYk0D' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-18651704/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- freecontact_1.0.21-7build1.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-DkWTe0/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-DkWTe0/apt_archive ./ InRelease Get:2 copy:/<>/resolver-DkWTe0/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-DkWTe0/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-DkWTe0/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-DkWTe0/apt_archive ./ Packages [525 B] Fetched 2858 B in 0s (46.8 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libffi6 libhogweed4 libisl21 libnettle6 libperl5.28 perl-modules-5.28 Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-DkWTe0/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (48.6 kB/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 14411 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper (>= 11~), bash-completion, d-shlibs, gfortran, libblas-dev | libblas-3.so, libboost-dev, libboost-program-options-dev, liblapack-dev | liblapack-3.so, libtool, libxerces-c-dev, perl, xsdcxx Filtered Build-Depends: debhelper (>= 11~), bash-completion, d-shlibs, gfortran, libblas-dev | libblas-3.so, libboost-dev, libboost-program-options-dev, liblapack-dev | liblapack-3.so, libtool, libxerces-c-dev, perl, xsdcxx dpkg-deb: building package 'sbuild-build-depends-freecontact-dummy' in '/<>/resolver-Dv1IIu/apt_archive/sbuild-build-depends-freecontact-dummy.deb'. Ign:1 copy:/<>/resolver-Dv1IIu/apt_archive ./ InRelease Get:2 copy:/<>/resolver-Dv1IIu/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-Dv1IIu/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-Dv1IIu/apt_archive ./ Sources [299 B] Get:5 copy:/<>/resolver-Dv1IIu/apt_archive ./ Packages [622 B] Fetched 3040 B in 0s (27.7 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install freecontact build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libffi6 libhogweed4 libisl21 libnettle6 libperl5.28 perl-modules-5.28 Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bash-completion bsdmainutils d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base gfortran gfortran-9 groff-base icu-devtools intltool-debian libarchive-zip-perl libasn1-8-heimdal libblas-dev libblas3 libboost-dev libboost-program-options-dev libboost-program-options1.71-dev libboost-program-options1.71.0 libboost1.71-dev libbrotli1 libbsd0 libcroco3 libcurl3-gnutls libdebhelper-perl libelf1 libfile-stripnondeterminism-perl libgfortran-9-dev libgfortran5 libglib2.0-0 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libicu-dev libicu63 libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblapack-dev liblapack3 libldap-2.4-2 libldap-common libmagic-mgc libmagic1 libnghttp2-14 libpipeline1 libpsl5 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh-4 libsub-override-perl libtool libuchardet0 libwind0-heimdal libxerces-c-dev libxerces-c3.2 libxml2 m4 man-db po-debconf xsdcxx Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev gfortran-multilib gfortran-doc gfortran-9-multilib gfortran-9-doc libcoarrays-dev groff liblapack-doc libboost-doc libboost1.71-doc libboost-atomic1.71-dev libboost-chrono1.71-dev libboost-container1.71-dev libboost-context1.71-dev libboost-contract1.71-dev libboost-coroutine1.71-dev libboost-date-time1.71-dev libboost-exception1.71-dev libboost-fiber1.71-dev libboost-filesystem1.71-dev libboost-graph1.71-dev libboost-graph-parallel1.71-dev libboost-iostreams1.71-dev libboost-locale1.71-dev libboost-log1.71-dev libboost-math1.71-dev libboost-mpi1.71-dev libboost-mpi-python1.71-dev libboost-numpy1.71-dev libboost-python1.71-dev libboost-random1.71-dev libboost-regex1.71-dev libboost-serialization1.71-dev libboost-stacktrace1.71-dev libboost-system1.71-dev libboost-test1.71-dev libboost-thread1.71-dev libboost-timer1.71-dev libboost-type-erasure1.71-dev libboost-wave1.71-dev libboost1.71-tools-dev libmpfrc++-dev libntl-dev krb5-doc krb5-user icu-doc libtool-doc gcj-jdk libxerces-c-doc m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs krb5-locales publicsuffix libsasl2-modules libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bash-completion bsdmainutils d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base gfortran gfortran-9 groff-base icu-devtools intltool-debian libarchive-zip-perl libasn1-8-heimdal libblas-dev libblas3 libboost-dev libboost-program-options-dev libboost-program-options1.71-dev libboost-program-options1.71.0 libboost1.71-dev libbrotli1 libbsd0 libcroco3 libcurl3-gnutls libdebhelper-perl libelf1 libfile-stripnondeterminism-perl libgfortran-9-dev libgfortran5 libglib2.0-0 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libicu-dev libicu63 libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblapack-dev liblapack3 libldap-2.4-2 libldap-common libmagic-mgc libmagic1 libnghttp2-14 libpipeline1 libpsl5 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh-4 libsub-override-perl libtool libuchardet0 libwind0-heimdal libxerces-c-dev libxerces-c3.2 libxml2 m4 man-db po-debconf sbuild-build-depends-freecontact-dummy xsdcxx 0 upgraded, 78 newly installed, 0 to remove and 0 not upgraded. Need to get 52.1 MB of archives. After this operation, 311 MB of additional disk space will be used. Get:1 copy:/<>/resolver-Dv1IIu/apt_archive ./ sbuild-build-depends-freecontact-dummy 0.invalid.0 [948 B] Get:2 http://ftpmaster.internal/ubuntu focal/main armhf libbsd0 armhf 0.10.0-1 [49.8 kB] Get:3 http://ftpmaster.internal/ubuntu focal/main armhf bsdmainutils armhf 11.1.2ubuntu2 [176 kB] Get:4 http://ftpmaster.internal/ubuntu focal/main armhf libuchardet0 armhf 0.0.6-3 [62.1 kB] Get:5 http://ftpmaster.internal/ubuntu focal/main armhf groff-base armhf 1.22.4-4 [777 kB] Get:6 http://ftpmaster.internal/ubuntu focal/main armhf libpipeline1 armhf 1.5.2-2 [23.5 kB] Get:7 http://ftpmaster.internal/ubuntu focal/main armhf man-db armhf 2.9.0-2 [1079 kB] Get:8 http://ftpmaster.internal/ubuntu focal/main armhf libmagic-mgc armhf 1:5.38-4 [218 kB] Get:9 http://ftpmaster.internal/ubuntu focal/main armhf libmagic1 armhf 1:5.38-4 [68.3 kB] Get:10 http://ftpmaster.internal/ubuntu focal/main armhf file armhf 1:5.38-4 [22.4 kB] Get:11 http://ftpmaster.internal/ubuntu focal/main armhf libelf1 armhf 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armhf libhx509-5-heimdal armhf 7.7.0+dfsg-1 [88.7 kB] Get:62 http://ftpmaster.internal/ubuntu focal/main armhf libkrb5-26-heimdal armhf 7.7.0+dfsg-1 [170 kB] Get:63 http://ftpmaster.internal/ubuntu focal/main armhf libheimntlm0-heimdal armhf 7.7.0+dfsg-1 [13.2 kB] Get:64 http://ftpmaster.internal/ubuntu focal/main armhf libgssapi3-heimdal armhf 7.7.0+dfsg-1 [80.0 kB] Get:65 http://ftpmaster.internal/ubuntu focal/main armhf libsasl2-modules-db armhf 2.1.27+dfsg-2 [13.4 kB] Get:66 http://ftpmaster.internal/ubuntu focal/main armhf libsasl2-2 armhf 2.1.27+dfsg-2 [42.7 kB] Get:67 http://ftpmaster.internal/ubuntu focal/main armhf libldap-common all 2.4.48+dfsg-1ubuntu4 [16.9 kB] Get:68 http://ftpmaster.internal/ubuntu focal/main armhf libldap-2.4-2 armhf 2.4.48+dfsg-1ubuntu4 [133 kB] Get:69 http://ftpmaster.internal/ubuntu focal/main armhf libnghttp2-14 armhf 1.40.0-1 [68.0 kB] Get:70 http://ftpmaster.internal/ubuntu focal/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2build1 [49.1 kB] Get:71 http://ftpmaster.internal/ubuntu focal/main armhf libssh-4 armhf 0.9.3-2ubuntu1 [147 kB] Get:72 http://ftpmaster.internal/ubuntu focal/main armhf libcurl3-gnutls armhf 7.66.0-1ubuntu1 [200 kB] Get:73 http://ftpmaster.internal/ubuntu focal/main armhf libicu-dev armhf 63.2-2 [8927 kB] Get:74 http://ftpmaster.internal/ubuntu focal/main armhf liblapack3 armhf 3.9.0-1 [1733 kB] Get:75 http://ftpmaster.internal/ubuntu focal/main armhf liblapack-dev armhf 3.9.0-1 [1813 kB] Get:76 http://ftpmaster.internal/ubuntu focal/universe armhf libxerces-c3.2 armhf 3.2.2+debian-1build1 [720 kB] Get:77 http://ftpmaster.internal/ubuntu focal/universe armhf libxerces-c-dev armhf 3.2.2+debian-1build1 [1525 kB] Get:78 http://ftpmaster.internal/ubuntu focal/universe armhf xsdcxx armhf 4.0.0-8 [1695 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 52.1 MB in 3s (15.9 MB/s) Selecting previously unselected package libbsd0:armhf. 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Setting up libmagic-mgc (1:5.38-4) ... Setting up libarchive-zip-perl (1.67-1) ... Setting up libglib2.0-0:armhf (2.63.3-3) ... No schema files found: doing nothing. Setting up libdebhelper-perl (12.7.3ubuntu1) ... Setting up libbrotli1:armhf (1.0.7-6) ... Setting up libboost1.71-dev:armhf (1.71.0-5ubuntu1) ... Setting up libnghttp2-14:armhf (1.40.0-1) ... Setting up libmagic1:armhf (1:5.38-4) ... Setting up gettext-base (0.19.8.1-10) ... Setting up file (1:5.38-4) ... Setting up libldap-common (2.4.48+dfsg-1ubuntu4) ... Setting up libicu63:armhf (63.2-2) ... Setting up libkrb5support0:armhf (1.17-6ubuntu3) ... Setting up libsasl2-modules-db:armhf (2.1.27+dfsg-2) ... Setting up autotools-dev (20180224.1) ... Setting up libblas3:armhf (3.9.0-1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2build1) ... Setting up bash-completion (1:2.10-1ubuntu1) ... Setting up libsigsegv2:armhf (2.12-2) ... Setting up autopoint (0.19.8.1-10) ... Setting up icu-devtools (63.2-2) ... Setting up d-shlibs (0.88ubuntu2) ... Setting up libk5crypto3:armhf (1.17-6ubuntu3) ... Setting up libsasl2-2:armhf (2.1.27+dfsg-2) ... Setting up libgfortran5:armhf (10-20200202-1ubuntu1) ... Setting up libroken18-heimdal:armhf (7.7.0+dfsg-1) ... Setting up libuchardet0:armhf (0.0.6-3) ... Setting up libsub-override-perl (0.09-2) ... Setting up libkrb5-3:armhf (1.17-6ubuntu3) ... Setting up libboost-dev:armhf (1.71.0.0ubuntu1) ... Setting up libbsd0:armhf (0.10.0-1) ... Setting up libelf1:armhf (0.176-1.1build1) ... Setting up libicu-dev:armhf (63.2-2) ... Setting up libxml2:armhf (2.9.4+dfsg1-8ubuntu3) ... Setting up libblas-dev:armhf (3.9.0-1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode Setting up libheimbase1-heimdal:armhf (7.7.0+dfsg-1) ... Setting up libboost-program-options1.71.0:armhf (1.71.0-5ubuntu1) ... Setting up libfile-stripnondeterminism-perl (1.6.3-2) ... Setting up libboost-program-options1.71-dev:armhf (1.71.0-5ubuntu1) ... Setting up liblapack3:armhf (3.9.0-1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode Setting up libtool (2.4.6-11) ... Setting up libasn1-8-heimdal:armhf (7.7.0+dfsg-1) ... Setting up libgfortran-9-dev:armhf (9.2.1-26ubuntu3) ... Setting up m4 (1.4.18-4) ... Setting up libhcrypto4-heimdal:armhf (7.7.0+dfsg-1) ... Setting up libwind0-heimdal:armhf (7.7.0+dfsg-1) ... Setting up libboost-program-options-dev:armhf (1.71.0.0ubuntu1) ... Setting up bsdmainutils (11.1.2ubuntu2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up liblapack-dev:armhf (3.9.0-1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode Setting up libgssapi-krb5-2:armhf (1.17-6ubuntu3) ... Setting up libcroco3:armhf (0.6.13-1) ... Setting up libssh-4:armhf (0.9.3-2ubuntu1) ... Setting up autoconf (2.69-11.1) ... Setting up dh-strip-nondeterminism (1.6.3-2) ... Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-4) ... Setting up automake (1:1.16.1-4ubuntu5) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.19.8.1-10) ... Setting up gfortran-9 (9.2.1-26ubuntu3) ... Setting up libhx509-5-heimdal:armhf (7.7.0+dfsg-1) ... Setting up man-db (2.9.0-2) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up gfortran (4:9.2.1-3.1ubuntu1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libkrb5-26-heimdal:armhf (7.7.0+dfsg-1) ... Setting up po-debconf (1.0.21) ... Setting up libheimntlm0-heimdal:armhf (7.7.0+dfsg-1) ... Setting up libgssapi3-heimdal:armhf (7.7.0+dfsg-1) ... Setting up libldap-2.4-2:armhf (2.4.48+dfsg-1ubuntu4) ... Setting up libcurl3-gnutls:armhf (7.66.0-1ubuntu1) ... Setting up libxerces-c3.2:armhf (3.2.2+debian-1build1) ... Setting up xsdcxx (4.0.0-8) ... Setting up libxerces-c-dev (3.2.2+debian-1build1) ... Setting up debhelper (12.7.3ubuntu1) ... Setting up sbuild-build-depends-freecontact-dummy (0.invalid.0) ... Setting up dh-autoreconf (19) ... Processing triggers for libc-bin (2.30-0ubuntu3) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-173-generic arm64 (armv7l) Toolchain package versions: binutils_2.34-1ubuntu1 dpkg-dev_1.19.7ubuntu2 g++-9_9.2.1-26ubuntu3 gcc-9_9.2.1-26ubuntu3 libc6-dev_2.30-0ubuntu3 libstdc++-9-dev_9.2.1-26ubuntu3 libstdc++6_10-20200202-1ubuntu1 linux-libc-dev_5.4.0-13.16 Package versions: adduser_3.118ubuntu1 advancecomp_2.1-2.1 apt_1.9.8 autoconf_2.69-11.1 automake_1:1.16.1-4ubuntu5 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11ubuntu2 base-passwd_3.5.47 bash_5.0-5ubuntu1 bash-completion_1:2.10-1ubuntu1 binutils_2.34-1ubuntu1 binutils-arm-linux-gnueabihf_2.34-1ubuntu1 binutils-common_2.34-1ubuntu1 bsdmainutils_11.1.2ubuntu2 bsdutils_1:2.34-0.1ubuntu5 build-essential_12.8ubuntu1 bzip2_1.0.8-2 ca-certificates_20190110 coreutils_8.30-3ubuntu2 cpp_4:9.2.1-3.1ubuntu1 cpp-9_9.2.1-26ubuntu3 d-shlibs_0.88ubuntu2 dash_0.5.10.2-6 debconf_1.5.73 debhelper_12.7.3ubuntu1 debianutils_4.9.1 dh-autoreconf_19 dh-strip-nondeterminism_1.6.3-2 diffutils_1:3.7-3 dpkg_1.19.7ubuntu2 dpkg-dev_1.19.7ubuntu2 dwz_0.13-5 e2fsprogs_1.45.3-4ubuntu3 fakeroot_1.24-1 fdisk_2.34-0.1ubuntu5 file_1:5.38-4 findutils_4.6.0+git+20190209-2ubuntu1 g++_4:9.2.1-3.1ubuntu1 g++-9_9.2.1-26ubuntu3 gcc_4:9.2.1-3.1ubuntu1 gcc-10-base_10-20200202-1ubuntu1 gcc-9_9.2.1-26ubuntu3 gcc-9-base_9.2.1-26ubuntu3 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gfortran_4:9.2.1-3.1ubuntu1 gfortran-9_9.2.1-26ubuntu3 gpg_2.2.17-3ubuntu1 gpg-agent_2.2.17-3ubuntu1 gpgconf_2.2.17-3ubuntu1 gpgv_2.2.17-3ubuntu1 grep_3.4-1 groff-base_1.22.4-4 gzip_1.10-0ubuntu4 hostname_3.23 icu-devtools_63.2-2 init_1.57 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-5ubuntu1 libapparmor1_2.13.3-7ubuntu1 libapt-pkg5.90_1.9.8 libarchive-zip-perl_1.67-1 libargon2-1_0~20171227-0.2 libasan5_9.2.1-26ubuntu3 libasn1-8-heimdal_7.7.0+dfsg-1 libassuan0_2.5.3-7ubuntu2 libatomic1_10-20200202-1ubuntu1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-2ubuntu5 libaudit1_1:2.8.5-2ubuntu5 libbinutils_2.34-1ubuntu1 libblas-dev_3.9.0-1 libblas3_3.9.0-1 libblkid1_2.34-0.1ubuntu5 libboost-dev_1.71.0.0ubuntu1 libboost-program-options-dev_1.71.0.0ubuntu1 libboost-program-options1.71-dev_1.71.0-5ubuntu1 libboost-program-options1.71.0_1.71.0-5ubuntu1 libboost1.71-dev_1.71.0-5ubuntu1 libbrotli1_1.0.7-6 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libc-bin_2.30-0ubuntu3 libc-dev-bin_2.30-0ubuntu3 libc6_2.30-0ubuntu3 libc6-dev_2.30-0ubuntu3 libcap-ng0_0.7.9-2.1build1 libcap2_1:2.27-1 libcc1-0_10-20200202-1ubuntu1 libcom-err2_1.45.3-4ubuntu3 libcroco3_0.6.13-1 libcryptsetup12_2:2.2.2-2ubuntu1 libctf-nobfd0_2.34-1ubuntu1 libctf0_2.34-1ubuntu1 libcurl3-gnutls_7.66.0-1ubuntu1 libdb5.3_5.3.28+dfsg1-0.6ubuntu1 libdebconfclient0_0.251ubuntu1 libdebhelper-perl_12.7.3ubuntu1 libdevmapper1.02.1_2:1.02.155-2ubuntu8 libdpkg-perl_1.19.7ubuntu2 libelf1_0.176-1.1build1 libext2fs2_1.45.3-4ubuntu3 libfakeroot_1.24-1 libfdisk1_2.34-0.1ubuntu5 libffi6_3.2.1-9 libffi7_3.3-3 libfile-stripnondeterminism-perl_1.6.3-2 libgcc-9-dev_9.2.1-26ubuntu3 libgcc-s1_10-20200202-1ubuntu1 libgcc1_1:10-20200202-1ubuntu1 libgcrypt20_1.8.5-3ubuntu1 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libgfortran-9-dev_9.2.1-26ubuntu3 libgfortran5_10-20200202-1ubuntu1 libglib2.0-0_2.63.3-3 libgmp10_2:6.2.0+dfsg-3 libgnutls30_3.6.11.1-2ubuntu2 libgomp1_10-20200202-1ubuntu1 libgpg-error0_1.36-7ubuntu1 libgssapi-krb5-2_1.17-6ubuntu3 libgssapi3-heimdal_7.7.0+dfsg-1 libhcrypto4-heimdal_7.7.0+dfsg-1 libheimbase1-heimdal_7.7.0+dfsg-1 libheimntlm0-heimdal_7.7.0+dfsg-1 libhogweed4_3.4.1-1 libhogweed5_3.5.1+really3.5.1-2 libhx509-5-heimdal_7.7.0+dfsg-1 libicu-dev_63.2-2 libicu63_63.2-2 libidn2-0_2.2.0-2 libip4tc2_1.8.3-2ubuntu5 libisl21_0.21-2 libisl22_0.22-2 libjson-c4_0.13.1+dfsg-6 libk5crypto3_1.17-6ubuntu3 libkeyutils1_1.6-6ubuntu1 libkmod2_26-3ubuntu1 libkrb5-26-heimdal_7.7.0+dfsg-1 libkrb5-3_1.17-6ubuntu3 libkrb5support0_1.17-6ubuntu3 liblapack-dev_3.9.0-1 liblapack3_3.9.0-1 libldap-2.4-2_2.4.48+dfsg-1ubuntu4 libldap-common_2.4.48+dfsg-1ubuntu4 liblockfile-bin_1.16-1.1 liblockfile1_1.16-1.1 liblz4-1_1.9.2-2 liblzma5_5.2.4-1 libmagic-mgc_1:5.38-4 libmagic1_1:5.38-4 libmount1_2.34-0.1ubuntu5 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libncurses6_6.1+20191019-1ubuntu1 libncursesw6_6.1+20191019-1ubuntu1 libnettle6_3.4.1-1 libnettle7_3.5.1+really3.5.1-2 libnghttp2-14_1.40.0-1 libnpth0_1.6-1 libp11-kit0_0.23.20-1 libpam-modules_1.3.1-5ubuntu4 libpam-modules-bin_1.3.1-5ubuntu4 libpam-runtime_1.3.1-5ubuntu4 libpam0g_1.3.1-5ubuntu4 libpcre2-8-0_10.34-7 libpcre3_2:8.39-12 libperl5.28_5.28.1-6build1 libperl5.30_5.30.0-9 libpipeline1_1.5.2-2 libpng16-16_1.6.37-1 libprocps7_2:3.3.15-2ubuntu3 libpsl5_0.20.2-2 libreadline8_8.0-3 libroken18-heimdal_7.7.0+dfsg-1 librtmp1_2.4+20151223.gitfa8646d.1-2build1 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.2-2ubuntu2 libselinux1_3.0-1 libsemanage-common_3.0-1 libsemanage1_3.0-1 libsepol1_3.0-1 libsigsegv2_2.12-2 libsmartcols1_2.34-0.1ubuntu5 libsqlite3-0_3.31.1-1 libss2_1.45.3-4ubuntu3 libssh-4_0.9.3-2ubuntu1 libssl1.1_1.1.1d-2ubuntu3 libstdc++-9-dev_9.2.1-26ubuntu3 libstdc++6_10-20200202-1ubuntu1 libsub-override-perl_0.09-2 libsystemd0_244.1-0ubuntu2 libtasn1-6_4.15.0-2 libtinfo6_6.1+20191019-1ubuntu1 libtool_2.4.6-11 libubsan1_10-20200202-1ubuntu1 libuchardet0_0.0.6-3 libudev1_244.1-0ubuntu2 libunistring2_0.9.10-2 libuuid1_2.34-0.1ubuntu5 libwind0-heimdal_7.7.0+dfsg-1 libxerces-c-dev_3.2.2+debian-1build1 libxerces-c3.2_3.2.2+debian-1build1 libxml2_2.9.4+dfsg1-8ubuntu3 libzstd1_1.4.4+dfsg-1 linux-libc-dev_5.4.0-13.16 lockfile-progs_0.1.18 login_1:4.8-1ubuntu1 logsave_1.45.3-4ubuntu3 lsb-base_11.1.0ubuntu2 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.0-2 mawk_1.3.3-17ubuntu3 mount_2.34-0.1ubuntu5 ncurses-base_6.1+20191019-1ubuntu1 ncurses-bin_6.1+20191019-1ubuntu1 openssl_1.1.1d-2ubuntu3 optipng_0.7.7-1 passwd_1:4.8-1ubuntu1 patch_2.7.6-6 perl_5.30.0-9 perl-base_5.30.0-9 perl-modules-5.28_5.28.1-6build1 perl-modules-5.30_5.30.0-9 pinentry-curses_1.1.0-3 pkgbinarymangler_144 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.15-2ubuntu3 readline-common_8.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-freecontact-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 systemd_244.1-0ubuntu2 systemd-sysv_244.1-0ubuntu2 sysvinit-utils_2.96-1ubuntu1 tar_1.30+dfsg-6 tzdata_2019c-3 ubuntu-keyring_2018.09.18.1 util-linux_2.34-0.1ubuntu5 xsdcxx_4.0.0-8 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1ubuntu3 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Mon Feb 3 20:25:31 2020 UTC gpgv: using RSA key EE240A052A231AD8925841D79B8EC849D5EF70ED gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./freecontact_1.0.21-7build1.dsc dpkg-source: info: extracting freecontact in freecontact-1.0.21 dpkg-source: info: unpacking freecontact_1.0.21.orig.tar.xz dpkg-source: info: unpacking freecontact_1.0.21-7build1.debian.tar.xz Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-18651704 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-18651704 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-18651704 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package freecontact dpkg-buildpackage: info: source version 1.0.21-7build1 dpkg-buildpackage: info: source distribution focal dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean --with bash-completion debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' rm -f build-indep-stamp dh_auto_clean make[1]: Leaving directory '/<>' dh_clean debian/rules build-arch dh build-arch --with bash-completion dh_update_autotools_config -a dh_autoreconf -a libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:29: installing './compile' configure.ac:22: installing './missing' lib/Makefile.am: installing './depcomp' debian/rules override_dh_auto_configure-arch make[1]: Entering directory '/<>' dh_auto_configure -- --with-boost-libdir=/usr/lib/arm-linux-gnueabihf ./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --libexecdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --with-boost-libdir=/usr/lib/arm-linux-gnueabihf configure: WARNING: unrecognized options: --disable-maintainer-mode checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for g++... g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of g++... none checking for g77... no checking for xlf... no checking for f77... f77 checking whether we are using the GNU Fortran 77 compiler... yes checking whether f77 accepts -g... yes checking for gfortran... gfortran checking whether we are using the GNU Fortran compiler... yes checking whether gfortran accepts -g... yes checking build system type... arm-unknown-linux-gnueabihf checking host system type... arm-unknown-linux-gnueabihf checking how to get verbose linking output from gfortran... -v checking for Fortran libraries of gfortran... -L/usr/lib/gcc/arm-linux-gnueabihf/9 -L/usr/lib/gcc/arm-linux-gnueabihf/9/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/9/../../../../lib -L/lib/arm-linux-gnueabihf -L/lib/../lib -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/../lib -L/usr/lib/gcc/arm-linux-gnueabihf/9/../../.. -lgfortran -lm checking how to print strings... printf checking for gcc... gcc checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... none checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for f77 option to produce PIC... -fPIC checking if f77 PIC flag -fPIC works... yes checking if f77 static flag -static works... yes checking if f77 supports -c -o file.o... yes checking if f77 supports -c -o file.o... (cached) yes checking whether the f77 linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate configure: -O3 enables: -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-reference-addressable -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -floop-interchange -floop-unroll-and-jam -flra-remat -fmove-loop-invariants -fomit-frame-pointer -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -freorder-blocks -freorder-functions -frerun-cse-after-loop -fsched-pressure -fschedule-insns -fschedule-insns2 -fsection-anchors -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fthread-jumps -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-distribution -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funswitch-loops -fversion-loops-for-strides checking for boostlib >= 1.20.0... yes checking whether the Boost::Program_Options library is available... yes checking for exit in -lboost_program_options... yes checking whether HAVE_BOOST_PROGRAM_OPTIONS is declared... yes checking for OpenMP flag of C++ compiler... -fopenmp checking how to get verbose linking output from f77... -v checking for Fortran 77 libraries of f77... -L/usr/lib/gcc/arm-linux-gnueabihf/9 -L/usr/lib/gcc/arm-linux-gnueabihf/9/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/9/../../../../lib -L/lib/arm-linux-gnueabihf -L/lib/../lib -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/../lib -L/usr/lib/gcc/arm-linux-gnueabihf/9/../../.. -lgfortran -lm checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking if sgemm_ is being linked in already... no checking for sgemm_ in -lopenblas... no checking for ATL_xerbla in -latlas... no checking for sgemm_ in -lblas... yes checking for dgemm_ in -ldgemm... no checking for sgemm_ in -lmkl... no checking for sgemm_ in -framework vecLib... no checking for sgemm_ in -lcxml... no checking for sgemm_ in -ldxml... no checking for sgemm_ in -lscs... no checking for sgemm_ in -lcomplib.sgimath... no checking for sgemm_ in -lblas... (cached) yes checking for sgemm_ in -lessl... no checking for sgemm_ in -lblas... (cached) yes checking for cheev_... no checking for cheev_ in -llapack... yes checking for the pthreads library -lpthreads... no checking whether pthreads work without any flags... no checking whether pthreads work with -Kthread... no checking whether pthreads work with -kthread... no checking for the pthreads library -llthread... no checking whether pthreads work with -pthread... yes checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE checking if more special flags are required for pthreads... no checking for PTHREAD_PRIO_INHERIT... yes checking for Xerces C++ Parser headers in /usr/include and /usr/include/xercesc... found checking for Xerces C++ Parser libraries... found checking for Xerces C++ Parser... yes checking for xsdcxx... xsdcxx checking for x86 cpuid output... unknown checking for doxygen... no configure: WARNING: doxygen not found - will not generate any doxygen documentation checking for perl... /usr/bin/perl checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating lib/Doxyfile config.status: creating lib/Makefile config.status: creating src/Makefile config.status: creating lib/config.h config.status: executing depfiles commands config.status: executing libtool commands configure: WARNING: unrecognized options: --disable-maintainer-mode make[1]: Leaving directory '/<>' dh_auto_build -a make -j4 make[1]: Entering directory '/<>' Making all in lib make[2]: Entering directory '/<>/lib' make all-am make[3]: Entering directory '/<>/lib' /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wall -fvisibility=hidden -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-reference-addressable -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -floop-interchange -floop-unroll-and-jam -flra-remat -fmove-loop-invariants -fomit-frame-pointer -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -freorder-blocks -freorder-functions -frerun-cse-after-loop -fsched-pressure -fschedule-insns -fschedule-insns2 -fsection-anchors -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fthread-jumps -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-distribution -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funswitch-loops -fversion-loops-for-strides -ffast-math -funroll-loops -ftree-vectorizer-verbose=0 -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libfreecontact_la-freecontact.lo `test -f 'freecontact.cpp' || echo './'`freecontact.cpp /bin/bash ../libtool --tag=FC --mode=compile gfortran -fvisibility=hidden -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-reference-addressable -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -floop-interchange -floop-unroll-and-jam -flra-remat -fmove-loop-invariants -fomit-frame-pointer -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -freorder-blocks -freorder-functions -frerun-cse-after-loop -fsched-pressure -fschedule-insns -fschedule-insns2 -fsection-anchors -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fthread-jumps -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-distribution -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funswitch-loops -fversion-loops-for-strides -ffast-math -funroll-loops -ftree-vectorizer-verbose=0 -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c -o libfreecontact_la-glassofast-real.lo `test -f 'glassofast-real.f90' || echo './'`glassofast-real.f90 libtool: compile: gfortran -fvisibility=hidden -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-reference-addressable -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -floop-interchange -floop-unroll-and-jam -flra-remat -fmove-loop-invariants -fomit-frame-pointer -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -freorder-blocks -freorder-functions -frerun-cse-after-loop -fsched-pressure -fschedule-insns -fschedule-insns2 -fsection-anchors -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fthread-jumps -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-distribution -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funswitch-loops -fversion-loops-for-strides -ffast-math -funroll-loops -ftree-vectorizer-verbose=0 -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c glassofast-real.f90 -fPIC -o .libs/libfreecontact_la-glassofast-real.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wall -fvisibility=hidden -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-reference-addressable -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -floop-interchange -floop-unroll-and-jam -flra-remat -fmove-loop-invariants -fomit-frame-pointer -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -freorder-blocks -freorder-functions -frerun-cse-after-loop -fsched-pressure -fschedule-insns -fschedule-insns2 -fsection-anchors -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fthread-jumps -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-distribution -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funswitch-loops -fversion-loops-for-strides -ffast-math -funroll-loops -ftree-vectorizer-verbose=0 -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c freecontact.cpp -fPIC -DPIC -o .libs/libfreecontact_la-freecontact.o libtool: compile: gfortran -fvisibility=hidden -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-reference-addressable -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -floop-interchange -floop-unroll-and-jam -flra-remat -fmove-loop-invariants -fomit-frame-pointer -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -freorder-blocks -freorder-functions -frerun-cse-after-loop -fsched-pressure -fschedule-insns -fschedule-insns2 -fsection-anchors -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fthread-jumps -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-distribution -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funswitch-loops -fversion-loops-for-strides -ffast-math -funroll-loops -ftree-vectorizer-verbose=0 -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -c glassofast-real.f90 -o libfreecontact_la-glassofast-real.o >/dev/null 2>&1 In file included from freecontact.cpp:32: freecontact.h:69:54: warning: ignoring attributes on template argument ‘freecontact::__m128i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes] 69 | class LIBFREEC_API ali_t : public std::vector<__m128i> | ^ In file included from freecontact.cpp:32: freecontact.h:113:56: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 113 | ali_t& push(const std::vector& __al) throw (alilen_error); | ^~~~~ freecontact.h:116:50: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 116 | inline ali_t& push(const std::string& __l) throw (alilen_error) | ^~~~~ In file included from freecontact.cpp:32: freecontact.h: In constructor ‘freecontact::ali_t::ali_t(uint16_t)’: freecontact.h:80:79: warning: ignoring attributes on template argument ‘freecontact::__m128i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes] 80 | ali_t( const uint16_t __alilen = 0 ) : std::vector<__m128i>(), seqcnt(0), alilen(__alilen), alilen16(( alilen-1 )/16 + 1), alilenpad( 16 * alilen16 ) | ^ In file included from freecontact.cpp:32: freecontact.h: At global scope: freecontact.h:185:23: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 185 | ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error); | ^~~~~ freecontact.h:219:23: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 219 | ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error); | ^~~~~ freecontact.h:227:23: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 227 | ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error); | ^~~~~ freecontact.h:234:23: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 234 | ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error) | ^~~~~ freecontact.cpp: In destructor ‘virtual freecontact::_glasso_timer::~_glasso_timer()’: freecontact.cpp:232:83: warning: throw will always call terminate() [-Wterminate] 232 | if (timer_delete(_timerid) == -1) throw std::runtime_error(strerror(errno)); | ^ freecontact.cpp:232:83: note: in C++11 destructors default to noexcept freecontact.cpp: At global scope: freecontact.cpp:240:23: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 240 | ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error) | ^~~~~ freecontact.cpp: In member function ‘void freecontact::predictor::get_seq_weights(freecontact::predictor::freq_vec_t&, double&, const freecontact::ali_t&, double, bool, int)’: freecontact.cpp:265:17: warning: unused variable ‘cache_holds_nseq’ [-Wunused-variable] 265 | uint32_t cache_holds_nseq = _cache_holds_nseq(__ali.alilenpad); | ^~~~~~~~~~~~~~~~ freecontact.cpp: At global scope: freecontact.cpp:439:23: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 439 | ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error) | ^~~~~ freecontact.cpp: In member function ‘freecontact::predictor::cont_res_t freecontact::predictor::run(const freecontact::ali_t&, const freq_vec_t&, double, double, double, uint16_t, double, double, bool, double, bool, bool, double, int, time_t, freecontact::predictor::time_res_t*)’: freecontact.cpp:545:9: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 545 | if(__timing) (*__timing)["pairfreq"] = t_diff.tv_sec+t_diff.tv_usec/1e6; if(dbg) fprintf(stderr, "calculated pair frequency table in %g secs\n", t_diff.tv_sec+t_diff.tv_usec/1e6 ); } | ^~ freecontact.cpp:545:82: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 545 | if(__timing) (*__timing)["pairfreq"] = t_diff.tv_sec+t_diff.tv_usec/1e6; if(dbg) fprintf(stderr, "calculated pair frequency table in %g secs\n", t_diff.tv_sec+t_diff.tv_usec/1e6 ); } | ^~ freecontact.cpp:690:13: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 690 | if(__timing) (*__timing)["shrink"] = t_diff.tv_sec+t_diff.tv_usec/1e6; if(dbg) fprintf(stderr, "\nshrank covariance matrix in %g secs\n", t_diff.tv_sec+t_diff.tv_usec/1e6 ); } | ^~ freecontact.cpp:690:84: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 690 | if(__timing) (*__timing)["shrink"] = t_diff.tv_sec+t_diff.tv_usec/1e6; if(dbg) fprintf(stderr, "\nshrank covariance matrix in %g secs\n", t_diff.tv_sec+t_diff.tv_usec/1e6 ); } | ^~ freecontact.cpp: At global scope: freecontact.cpp:976:23: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 976 | ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error) | ^~~~~ freecontact.cpp: In member function ‘freecontact::predictor::cont_res_t freecontact::predictor::run(const freecontact::ali_t&, double, double, double, uint16_t, double, double, bool, double, bool, bool, double, bool, int, time_t, freecontact::predictor::time_res_t*)’: freecontact.cpp:995:9: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 995 | if(__timing) (*__timing)["all"] = t_diff.tv_sec+t_diff.tv_usec/1e6; if(dbg) fprintf(stderr, "all done in %g secs\n", t_diff.tv_sec+t_diff.tv_usec/1e6); } | ^~ freecontact.cpp:995:77: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 995 | if(__timing) (*__timing)["all"] = t_diff.tv_sec+t_diff.tv_usec/1e6; if(dbg) fprintf(stderr, "all done in %g secs\n", t_diff.tv_sec+t_diff.tv_usec/1e6); } | ^~ freecontact.cpp: At global scope: freecontact.cpp:1001:63: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1001 | ali_t& ali_t::push(const std::vector& __al) throw (alilen_error) | ^~~~~ In file included from /usr/include/c++/9/vector:72, from /usr/include/boost/format.hpp:17, from freecontact.cpp:22: /usr/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = __vector(2) long long int; _Alloc = std::allocator<__vector(2) long long int>]’: /usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type ‘std::vector<__vector(2) long long int>::iterator’ {aka ‘__gnu_cxx::__normal_iterator<__vector(2) long long int*, std::vector<__vector(2) long long int> >’} changed in GCC 7.1 509 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/9/map:60, from freecontact.h:21, from freecontact.cpp:32: /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, double>; _KeyOfValue = std::_Select1st, double> >; _Compare = std::less >; _Alloc = std::allocator, double> >]’: /usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, double> >’} changed in GCC 7.1 2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, double>; _KeyOfValue = std::_Select1st, double> >; _Compare = std::less >; _Alloc = std::allocator, double> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, double> >’} changed in GCC 7.1 2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, double> >’} changed in GCC 7.1 /usr/include/c++/9/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, double>; _KeyOfValue = std::_Select1st, double> >; _Compare = std::less >; _Alloc = std::allocator, double> >]’: /usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, double> >’} changed in GCC 7.1 In file included from /usr/include/c++/9/map:61, from freecontact.h:21, from freecontact.cpp:32: /usr/include/c++/9/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = std::__cxx11::basic_string; _Tp = double; _Compare = std::less >; _Alloc = std::allocator, double> >]’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, double> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h: In function ‘void freecontact::_raw_score_matrix(std::map, freecontact::ct_vector >&, std::map, std::vector >&, std::map, double>&, uint16_t, const string&, const freecontact::_rawscore_calc_t&)’: /usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, double> >’} changed in GCC 7.1 499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h: In member function ‘freecontact::predictor::cont_res_t freecontact::predictor::run(const freecontact::ali_t&, double, double, double, uint16_t, double, double, bool, double, bool, bool, double, bool, int, time_t, freecontact::predictor::time_res_t*)’: /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, double> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, double> >’} changed in GCC 7.1 518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/9/vector:67, from /usr/include/boost/format.hpp:17, from freecontact.cpp:22: /usr/include/c++/9/bits/stl_vector.h: In member function ‘freecontact::ali_t& freecontact::ali_t::push(const std::vector&)’: /usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<__vector(2) long long int*, std::vector<__vector(2) long long int> >’ changed in GCC 7.1 957 | _M_fill_insert(end(), __new_size - size(), __x); | ^~~~~~~~~~~~~~ libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wall -fvisibility=hidden -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-reference-addressable -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -floop-interchange -floop-unroll-and-jam -flra-remat -fmove-loop-invariants -fomit-frame-pointer -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -freorder-blocks -freorder-functions -frerun-cse-after-loop -fsched-pressure -fschedule-insns -fschedule-insns2 -fsection-anchors -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fthread-jumps -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-distribution -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funswitch-loops -fversion-loops-for-strides -ffast-math -funroll-loops -ftree-vectorizer-verbose=0 -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c freecontact.cpp -o libfreecontact_la-freecontact.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=link g++ -fopenmp -Wall -fvisibility=hidden -falign-functions -falign-jumps -falign-labels -falign-loops -fbranch-count-reg -fcaller-saves -fcode-hoisting -fcombine-stack-adjustments -fcompare-elim -fcprop-registers -fcrossjumping -fcse-follow-jumps -fdefer-pop -fdevirtualize -fdevirtualize-speculatively -fexpensive-optimizations -fforward-propagate -fgcse -fgcse-after-reload -fguess-branch-probability -fhoist-adjacent-loads -fif-conversion -fif-conversion2 -findirect-inlining -finline-functions -finline-functions-called-once -finline-small-functions -fipa-bit-cp -fipa-cp -fipa-cp-clone -fipa-icf -fipa-icf-functions -fipa-icf-variables -fipa-profile -fipa-pure-const -fipa-ra -fipa-reference -fipa-reference-addressable -fipa-sra -fipa-vrp -fisolate-erroneous-paths-dereference -floop-interchange -floop-unroll-and-jam -flra-remat -fmove-loop-invariants -fomit-frame-pointer -foptimize-sibling-calls -foptimize-strlen -fpartial-inlining -fpeel-loops -fpeephole2 -fpredictive-commoning -freorder-blocks -freorder-functions -frerun-cse-after-loop -fsched-pressure -fschedule-insns -fschedule-insns2 -fsection-anchors -fshrink-wrap -fsplit-loops -fsplit-paths -fsplit-wide-types -fssa-phiopt -fstore-merging -fstrict-aliasing -fthread-jumps -ftree-bit-ccp -ftree-builtin-call-dce -ftree-ccp -ftree-ch -ftree-coalesce-vars -ftree-copy-prop -ftree-dce -ftree-dominator-opts -ftree-dse -ftree-fre -ftree-loop-distribute-patterns -ftree-loop-distribution -ftree-loop-vectorize -ftree-partial-pre -ftree-pre -ftree-pta -ftree-sink -ftree-slp-vectorize -ftree-slsr -ftree-sra -ftree-switch-conversion -ftree-tail-merge -ftree-ter -ftree-vrp -funswitch-loops -fversion-loops-for-strides -ffast-math -funroll-loops -ftree-vectorizer-verbose=0 -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -pthread -version-info 0:0:0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libfreecontact.la -rpath /usr/lib/arm-linux-gnueabihf libfreecontact_la-freecontact.lo libfreecontact_la-glassofast-real.lo -lrt -L/usr/lib/gcc/arm-linux-gnueabihf/9 -L/usr/lib/gcc/arm-linux-gnueabihf/9/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/9/../../../../lib -L/lib/arm-linux-gnueabihf -L/lib/../lib -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/../lib -L/usr/lib/gcc/arm-linux-gnueabihf/9/../../.. -lgfortran -lm -lblas -llapack libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/9/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/9/crtbeginS.o .libs/libfreecontact_la-freecontact.o .libs/libfreecontact_la-glassofast-real.o -lrt -L/usr/lib/gcc/arm-linux-gnueabihf/9 -L/usr/lib/gcc/arm-linux-gnueabihf/9/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/9/../../../../lib -L/lib/arm-linux-gnueabihf -L/lib/../lib -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/../lib -L/usr/lib/gcc/arm-linux-gnueabihf/9/../../.. -lgfortran -lblas -llapack -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/9/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/9/../../../arm-linux-gnueabihf/crtn.o -fopenmp -pthread -g -O2 -fstack-protector-strong -pthread -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -fopenmp -pthread -Wl,-soname -Wl,libfreecontact.so.0 -o .libs/libfreecontact.so.0.0.0 libtool: link: (cd ".libs" && rm -f "libfreecontact.so.0" && ln -s "libfreecontact.so.0.0.0" "libfreecontact.so.0") libtool: link: (cd ".libs" && rm -f "libfreecontact.so" && ln -s "libfreecontact.so.0.0.0" "libfreecontact.so") libtool: link: ar cru .libs/libfreecontact.a libfreecontact_la-freecontact.o libfreecontact_la-glassofast-real.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libfreecontact.a libtool: link: ( cd ".libs" && rm -f "libfreecontact.la" && ln -s "../libfreecontact.la" "libfreecontact.la" ) make[3]: Leaving directory '/<>/lib' make[2]: Leaving directory '/<>/lib' Making all in src make[2]: Entering directory '/<>/src' g++ -DHAVE_CONFIG_H -I. -I../lib -I../lib -I../src -I/usr/include -I/usr/include/xercesc -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o freecontact-freecontact.o `test -f 'freecontact.cpp' || echo './'`freecontact.cpp xsdcxx cxx-tree --location-map http://bioxsd.org/BioXSD-1.1.xsd=BioXSD-1.1.xsd \ --namespace-map http://rostlab.org/freecontact/input=freecontact_input_xsd \ --namespace-map http://rostlab.org/freecontact/output=freecontact_output_xsd \ --namespace-map http://bioxsd.org/BioXSD-1.1=BioXSD \ --generate-serialization --generate-doxygen \ --generate-polymorphic --polymorphic-type-all \ --omit-default-attributes \ --root-element-all \ --hxx-suffix _xsd.hxx --cxx-suffix _xsd.cxx \ BioXSD-1.1.xsd sed -e 's|__pkgdatadir__|/usr/share/freecontact|g;s|__examplesdir__|/usr/share/doc/freecontact/examples|g;s|__sysconfdir__|/etc|g;s|__bindir__|/usr/bin|g;s|__PACKAGE_VERSION__|1.0.21|g' "freecontact.cpp" | \ pod2man --utf8 -c 'User Commands' -r "1.0.21" -name FREECONTACT > "freecontact.1" xsdcxx cxx-tree --location-map http://bioxsd.org/BioXSD-1.1.xsd=BioXSD-1.1.xsd \ --namespace-map http://rostlab.org/freecontact/input=freecontact_input_xsd \ --namespace-map http://rostlab.org/freecontact/output=freecontact_output_xsd \ --namespace-map http://bioxsd.org/BioXSD-1.1=BioXSD \ --generate-serialization --generate-doxygen \ --generate-polymorphic --polymorphic-type-all \ --omit-default-attributes \ --root-element-all \ --hxx-suffix _xsd.hxx --cxx-suffix _xsd.cxx \ freecontact_input.xsd xsdcxx cxx-tree --location-map http://bioxsd.org/BioXSD-1.1.xsd=BioXSD-1.1.xsd \ --namespace-map http://rostlab.org/freecontact/input=freecontact_input_xsd \ --namespace-map http://rostlab.org/freecontact/output=freecontact_output_xsd \ --namespace-map http://bioxsd.org/BioXSD-1.1=BioXSD \ --generate-serialization --generate-doxygen \ --generate-polymorphic --polymorphic-type-all \ --omit-default-attributes \ --root-element-all \ --hxx-suffix _xsd.hxx --cxx-suffix _xsd.cxx \ freecontact_output.xsd g++ -DHAVE_CONFIG_H -I. -I../lib -I../lib -I../src -I/usr/include -I/usr/include/xercesc -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o freecontact-BioXSD-1.1_xsd.o `test -f 'BioXSD-1.1_xsd.cxx' || echo './'`BioXSD-1.1_xsd.cxx g++ -DHAVE_CONFIG_H -I. -I../lib -I../lib -I../src -I/usr/include -I/usr/include/xercesc -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o freecontact-freecontact_input_xsd.o `test -f 'freecontact_input_xsd.cxx' || echo './'`freecontact_input_xsd.cxx g++ -DHAVE_CONFIG_H -I. -I../lib -I../lib -I../src -I/usr/include -I/usr/include/xercesc -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o freecontact-_write_bioxsd.o `test -f '_write_bioxsd.cpp' || echo './'`_write_bioxsd.cpp In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1507:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1507 | sequence (::std::auto_ptr< sequence_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1585:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1585 | species (::std::auto_ptr< species_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1665:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1665 | reference (::std::auto_ptr< reference_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1741:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1741 | name (::std::auto_ptr< name_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1817:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1817 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1893:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1893 | translationData (::std::auto_ptr< translationData_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1969:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1969 | inlineBaseQuality (::std::auto_ptr< inlineBaseQuality_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1992:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1992 | BiosequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2105:45: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2105 | GeneralNucleotideSequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2186:44: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2186 | GeneralAminoacidSequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2267:38: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2267 | NucleotideSequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2348:37: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2348 | AminoacidSequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2611:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2611 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3051:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3051 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3109:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3109 | len (::std::auto_ptr< len_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3287:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3287 | min (::std::auto_ptr< min_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3366:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3366 | max (::std::auto_ptr< max_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3442:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3442 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3500:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3500 | minCertainty (::std::auto_ptr< minCertainty_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3567:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3567 | maxCertainty (::std::auto_ptr< maxCertainty_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3877:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3877 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3935:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3935 | bases (::std::auto_ptr< bases_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4110:36: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4110 | localAlignmentPosition (::std::auto_ptr< localAlignmentPosition_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4186:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4186 | sequenceRecord (::std::auto_ptr< sequenceRecord_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4262:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4262 | sequenceReference (::std::auto_ptr< sequenceReference_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4338:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4338 | sequenceName (::std::auto_ptr< sequenceName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4414:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4414 | species (::std::auto_ptr< species_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4490:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4490 | genomeBuild (::std::auto_ptr< genomeBuild_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4566:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4566 | chromosome (::std::auto_ptr< chromosome_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4644:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4644 | subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4720:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4720 | variantAccession (::std::auto_ptr< variantAccession_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4796:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4796 | variantNote (::std::auto_ptr< variantNote_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:5064:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 5064 | reversedDirection (::std::auto_ptr< reversedDirection_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:5589:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 5589 | name (::std::auto_ptr< name_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:5798:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 5798 | className (::std::auto_ptr< className_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:5938:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 5938 | properties (::std::auto_ptr< properties_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6115:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6115 | specificFeatureName (::std::auto_ptr< specificFeatureName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6385:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6385 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6627:36: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6627 | appliesToWholeSequence (::std::auto_ptr< appliesToWholeSequence_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1507:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1507 | sequence (::std::auto_ptr< sequence_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1585:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1585 | species (::std::auto_ptr< species_type > p); | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6703:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6703 | position (::std::auto_ptr< position_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6843:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6843 | occurrenceName (::std::auto_ptr< occurrenceName_type > p); | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1665:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1665 | reference (::std::auto_ptr< reference_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1741:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1741 | name (::std::auto_ptr< name_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1817:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1817 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1893:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1893 | translationData (::std::auto_ptr< translationData_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1969:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1969 | inlineBaseQuality (::std::auto_ptr< inlineBaseQuality_type > p); | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6919:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6919 | occurrenceNote (::std::auto_ptr< occurrenceNote_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6995:32: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6995 | featureTypeDetails (::std::auto_ptr< featureTypeDetails_type > p); | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1992:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1992 | BiosequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7203:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7203 | frame (::std::auto_ptr< frame_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7279:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7279 | phase (::std::auto_ptr< phase_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2105:45: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2105 | GeneralNucleotideSequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7419:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7419 | alignment (::std::auto_ptr< alignment_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2186:44: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2186 | GeneralAminoacidSequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2267:38: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2267 | NucleotideSequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2348:37: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2348 | AminoacidSequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7588:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7588 | referenceSequence (::std::auto_ptr< referenceSequence_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2611:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2611 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7742:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7742 | FeatureRecord (::std::auto_ptr< referenceSequence_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7901:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7901 | predicted (::std::auto_ptr< predicted_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3051:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3051 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7977:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7977 | experimental (::std::auto_ptr< experimental_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3109:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3109 | len (::std::auto_ptr< len_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8130:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8130 | method (::std::auto_ptr< method_type > p); | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3287:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3287 | min (::std::auto_ptr< min_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3366:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3366 | max (::std::auto_ptr< max_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3442:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3442 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3500:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3500 | minCertainty (::std::auto_ptr< minCertainty_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3567:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3567 | maxCertainty (::std::auto_ptr< maxCertainty_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8217:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8217 | MethodResult (::std::auto_ptr< method_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8357:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8357 | methodIdRef (::std::auto_ptr< methodIdRef_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8444:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8444 | Result (::std::auto_ptr< methodIdRef_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8602:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8602 | method (::std::auto_ptr< method_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8678:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8678 | methodIdRef (::std::auto_ptr< methodIdRef_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3877:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3877 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3935:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3935 | bases (::std::auto_ptr< bases_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8818:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8818 | verdict (::std::auto_ptr< verdict_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4110:36: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4110 | localAlignmentPosition (::std::auto_ptr< localAlignmentPosition_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4186:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4186 | sequenceRecord (::std::auto_ptr< sequenceRecord_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4262:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4262 | sequenceReference (::std::auto_ptr< sequenceReference_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4338:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4338 | sequenceName (::std::auto_ptr< sequenceName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4414:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4414 | species (::std::auto_ptr< species_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8973:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8973 | dataReference (::std::auto_ptr< dataReference_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9113:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9113 | verdict (::std::auto_ptr< verdict_type > p); | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4490:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4490 | genomeBuild (::std::auto_ptr< genomeBuild_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9189:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9189 | reliability (::std::auto_ptr< reliability_type > p); | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4566:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4566 | chromosome (::std::auto_ptr< chromosome_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4644:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4644 | subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9212:34: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9212 | ExperimentalEvidence (::std::auto_ptr< dataReference_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4720:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4720 | variantAccession (::std::auto_ptr< variantAccession_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4796:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4796 | variantNote (::std::auto_ptr< variantNote_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9566:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9566 | name (::std::auto_ptr< name_type > p); | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:5064:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 5064 | reversedDirection (::std::auto_ptr< reversedDirection_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9642:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9642 | index (::std::auto_ptr< index_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9718:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9718 | unit (::std::auto_ptr< unit_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9794:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9794 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9974:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9974 | position (::std::auto_ptr< position_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10032:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10032 | value (::std::auto_ptr< value_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10108:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10108 | scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10285:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10285 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10361:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10361 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10419:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10419 | certainty (::std::auto_ptr< certainty_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10679:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10679 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10755:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10755 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10813:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10813 | certainty (::std::auto_ptr< certainty_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11072:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11072 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11148:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11148 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:5589:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 5589 | name (::std::auto_ptr< name_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11206:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11206 | certainty (::std::auto_ptr< certainty_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11465:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11465 | min (::std::auto_ptr< min_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11544:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11544 | max (::std::auto_ptr< max_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11620:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11620 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11678:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11678 | minCertainty (::std::auto_ptr< minCertainty_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11745:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11745 | maxCertainty (::std::auto_ptr< maxCertainty_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:5798:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 5798 | className (::std::auto_ptr< className_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:5938:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 5938 | properties (::std::auto_ptr< properties_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12003:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12003 | max (::std::auto_ptr< max_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12061:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12061 | certainty (::std::auto_ptr< certainty_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6115:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6115 | specificFeatureName (::std::auto_ptr< specificFeatureName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6385:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6385 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12377:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12377 | insertion (::std::auto_ptr< insertion_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6627:36: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6627 | appliesToWholeSequence (::std::auto_ptr< appliesToWholeSequence_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12517:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12517 | nextPoint (::std::auto_ptr< nextPoint_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12593:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12593 | nextPartition (::std::auto_ptr< nextPartition_type > p); | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6703:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6703 | position (::std::auto_ptr< position_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12669:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12669 | samePoint (::std::auto_ptr< samePoint_type > p); | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6843:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6843 | occurrenceName (::std::auto_ptr< occurrenceName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6919:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6919 | occurrenceNote (::std::auto_ptr< occurrenceNote_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12745:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12745 | samePartition (::std::auto_ptr< samePartition_type > p); | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6995:32: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6995 | featureTypeDetails (::std::auto_ptr< featureTypeDetails_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12821:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12821 | outside (::std::auto_ptr< outside_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7203:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7203 | frame (::std::auto_ptr< frame_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7279:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7279 | phase (::std::auto_ptr< phase_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13071:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13071 | correspondance (::std::auto_ptr< correspondance_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13211:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13211 | insertion (::std::auto_ptr< insertion_type > p); | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7419:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7419 | alignment (::std::auto_ptr< alignment_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13351:39: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13351 | explicitSequenceReference (::std::auto_ptr< explicitSequenceReference_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7588:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7588 | referenceSequence (::std::auto_ptr< referenceSequence_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13597:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13597 | reference (::std::auto_ptr< reference_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7742:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7742 | FeatureRecord (::std::auto_ptr< referenceSequence_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7901:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7901 | predicted (::std::auto_ptr< predicted_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7977:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7977 | experimental (::std::auto_ptr< experimental_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13832:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13832 | geneticCode (::std::auto_ptr< geneticCode_type > p); | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8130:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8130 | method (::std::auto_ptr< method_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13908:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13908 | phase (::std::auto_ptr< phase_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13984:42: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13984 | reversedTranslationDirection (::std::auto_ptr< reversedTranslationDirection_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8217:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8217 | MethodResult (::std::auto_ptr< method_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8357:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8357 | methodIdRef (::std::auto_ptr< methodIdRef_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8444:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8444 | Result (::std::auto_ptr< methodIdRef_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14226:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14226 | dbName (::std::auto_ptr< dbName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14304:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14304 | dbUri (::std::auto_ptr< dbUri_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14380:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14380 | dbVersion (::std::auto_ptr< dbVersion_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14511:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14511 | wsdl (::std::auto_ptr< wsdl_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8602:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8602 | method (::std::auto_ptr< method_type > p); | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14587:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14587 | wsdlService (::std::auto_ptr< wsdlService_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8678:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8678 | methodIdRef (::std::auto_ptr< methodIdRef_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14663:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14663 | wsdlPort (::std::auto_ptr< wsdlPort_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8818:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8818 | verdict (::std::auto_ptr< verdict_type > p); | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14739:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14739 | webserviceOperation (::std::auto_ptr< webserviceOperation_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14815:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14815 | webserviceVersion (::std::auto_ptr< webserviceVersion_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14894:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14894 | webserviceDate (::std::auto_ptr< webserviceDate_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8973:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8973 | dataReference (::std::auto_ptr< dataReference_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9113:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9113 | verdict (::std::auto_ptr< verdict_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9189:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9189 | reliability (::std::auto_ptr< reliability_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9212:34: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9212 | ExperimentalEvidence (::std::auto_ptr< dataReference_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15075:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15075 | accession (::std::auto_ptr< accession_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15151:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15151 | entryUri (::std::auto_ptr< entryUri_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15227:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15227 | entryVersion (::std::auto_ptr< entryVersion_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15305:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15305 | date (::std::auto_ptr< date_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15481:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15481 | ontologyName (::std::auto_ptr< ontologyName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15559:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15559 | ontologyUri (::std::auto_ptr< ontologyUri_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15635:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15635 | ontologyVersion (::std::auto_ptr< ontologyVersion_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9566:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9566 | name (::std::auto_ptr< name_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9642:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9642 | index (::std::auto_ptr< index_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9718:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9718 | unit (::std::auto_ptr< unit_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15870:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15870 | accession (::std::auto_ptr< accession_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9794:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9794 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15946:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15946 | conceptUri (::std::auto_ptr< conceptUri_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16028:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16028 | term (::std::auto_ptr< term_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16207:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16207 | speciesName (::std::auto_ptr< speciesName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16283:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16283 | speciesNote (::std::auto_ptr< speciesNote_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9974:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9974 | position (::std::auto_ptr< position_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10032:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10032 | value (::std::auto_ptr< value_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16459:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16459 | subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10108:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10108 | scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16538:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16538 | supersequence (::std::auto_ptr< supersequence_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16617:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16617 | supersequenceName (::std::auto_ptr< supersequenceName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16693:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16693 | sequenceVersion (::std::auto_ptr< sequenceVersion_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16769:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16769 | variantAccession (::std::auto_ptr< variantAccession_type > p); | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10285:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10285 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16845:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16845 | variantNote (::std::auto_ptr< variantNote_type > p); | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10361:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10361 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10419:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10419 | certainty (::std::auto_ptr< certainty_type > p); | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17130:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17130 | name (::std::auto_ptr< name_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17206:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17206 | uri (::std::auto_ptr< uri_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17282:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17282 | version (::std::auto_ptr< version_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10679:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10679 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17358:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17358 | date (::std::auto_ptr< date_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10755:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10755 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17434:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17434 | wsdl (::std::auto_ptr< wsdl_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10813:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10813 | certainty (::std::auto_ptr< certainty_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17510:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17510 | wsdlService (::std::auto_ptr< wsdlService_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17586:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17586 | wsdlPort (::std::auto_ptr< wsdlPort_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11072:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11072 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17662:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17662 | webserviceOperation (::std::auto_ptr< webserviceOperation_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17738:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17738 | webserviceVersion (::std::auto_ptr< webserviceVersion_type > p); | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11148:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11148 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11206:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11206 | certainty (::std::auto_ptr< certainty_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17817:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17817 | webserviceDate (::std::auto_ptr< webserviceDate_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11465:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11465 | min (::std::auto_ptr< min_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11544:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11544 | max (::std::auto_ptr< max_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11620:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11620 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11678:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11678 | minCertainty (::std::auto_ptr< minCertainty_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11745:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11745 | maxCertainty (::std::auto_ptr< maxCertainty_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12003:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12003 | max (::std::auto_ptr< max_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12061:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12061 | certainty (::std::auto_ptr< certainty_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12377:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12377 | insertion (::std::auto_ptr< insertion_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12517:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12517 | nextPoint (::std::auto_ptr< nextPoint_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12593:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12593 | nextPartition (::std::auto_ptr< nextPartition_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12669:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12669 | samePoint (::std::auto_ptr< samePoint_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12745:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12745 | samePartition (::std::auto_ptr< samePartition_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12821:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12821 | outside (::std::auto_ptr< outside_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13071:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13071 | correspondance (::std::auto_ptr< correspondance_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13211:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13211 | insertion (::std::auto_ptr< insertion_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13351:39: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13351 | explicitSequenceReference (::std::auto_ptr< explicitSequenceReference_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13597:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13597 | reference (::std::auto_ptr< reference_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13832:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13832 | geneticCode (::std::auto_ptr< geneticCode_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13908:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13908 | phase (::std::auto_ptr< phase_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13984:42: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13984 | reversedTranslationDirection (::std::auto_ptr< reversedTranslationDirection_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:22916:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 22916 | relationName (::std::auto_ptr< relationName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14226:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14226 | dbName (::std::auto_ptr< dbName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14304:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14304 | dbUri (::std::auto_ptr< dbUri_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14380:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14380 | dbVersion (::std::auto_ptr< dbVersion_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14511:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14511 | wsdl (::std::auto_ptr< wsdl_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14587:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14587 | wsdlService (::std::auto_ptr< wsdlService_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14663:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14663 | wsdlPort (::std::auto_ptr< wsdlPort_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14739:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14739 | webserviceOperation (::std::auto_ptr< webserviceOperation_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14815:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14815 | webserviceVersion (::std::auto_ptr< webserviceVersion_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14894:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14894 | webserviceDate (::std::auto_ptr< webserviceDate_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:23505:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 23505 | canonicalVariant (::std::auto_ptr< canonicalVariant_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:23645:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 23645 | missing (::std::auto_ptr< missing_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:23787:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 23787 | position (::std::auto_ptr< position_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:23961:34: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 23961 | alignmentOfReference (::std::auto_ptr< alignmentOfReference_type > p); | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15075:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15075 | accession (::std::auto_ptr< accession_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15151:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15151 | entryUri (::std::auto_ptr< entryUri_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15227:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15227 | entryVersion (::std::auto_ptr< entryVersion_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15305:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15305 | date (::std::auto_ptr< date_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24019:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24019 | alignedSequence (::std::auto_ptr< alignedSequence_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24042:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24042 | alignment (::std::auto_ptr< alignedSequence_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15481:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15481 | ontologyName (::std::auto_ptr< ontologyName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15559:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15559 | ontologyUri (::std::auto_ptr< ontologyUri_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15635:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15635 | ontologyVersion (::std::auto_ptr< ontologyVersion_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24200:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24200 | sequenceRecord (::std::auto_ptr< sequenceRecord_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24276:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24276 | sequenceReference (::std::auto_ptr< sequenceReference_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15870:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15870 | accession (::std::auto_ptr< accession_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15946:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15946 | conceptUri (::std::auto_ptr< conceptUri_type > p); | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24352:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24352 | sequenceName (::std::auto_ptr< sequenceName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24428:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24428 | species (::std::auto_ptr< species_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16028:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16028 | term (::std::auto_ptr< term_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24504:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24504 | genomeBuild (::std::auto_ptr< genomeBuild_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16207:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16207 | speciesName (::std::auto_ptr< speciesName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16283:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16283 | speciesNote (::std::auto_ptr< speciesNote_type > p); | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24580:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24580 | chromosome (::std::auto_ptr< chromosome_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16459:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16459 | subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16538:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16538 | supersequence (::std::auto_ptr< supersequence_type > p); | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24658:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24658 | subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24734:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24734 | variantAccession (::std::auto_ptr< variantAccession_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16617:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16617 | supersequenceName (::std::auto_ptr< supersequenceName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24810:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24810 | variantNote (::std::auto_ptr< variantNote_type > p); | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16693:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16693 | sequenceVersion (::std::auto_ptr< sequenceVersion_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16769:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16769 | variantAccession (::std::auto_ptr< variantAccession_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16845:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16845 | variantNote (::std::auto_ptr< variantNote_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24970:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24970 | feature (::std::auto_ptr< feature_type > p); | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17130:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17130 | name (::std::auto_ptr< name_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:25046:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 25046 | condensedReferences (::std::auto_ptr< condensedReferences_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17206:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17206 | uri (::std::auto_ptr< uri_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17282:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17282 | version (::std::auto_ptr< version_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17358:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17358 | date (::std::auto_ptr< date_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17434:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17434 | wsdl (::std::auto_ptr< wsdl_type > p); | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:25133:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 25133 | annotation (::std::auto_ptr< feature_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17510:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17510 | wsdlService (::std::auto_ptr< wsdlService_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17586:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17586 | wsdlPort (::std::auto_ptr< wsdlPort_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17662:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17662 | webserviceOperation (::std::auto_ptr< webserviceOperation_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17738:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17738 | webserviceVersion (::std::auto_ptr< webserviceVersion_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17817:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17817 | webserviceDate (::std::auto_ptr< webserviceDate_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:25778:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 25778 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:25932:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 25932 | code (::std::auto_ptr< code_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26122:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 26122 | aminoacid (::std::auto_ptr< aminoacid_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26253:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 26253 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26781:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 26781 | method (::std::auto_ptr< method_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26857:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 26857 | ontology (::std::auto_ptr< ontology_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26933:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 26933 | database (::std::auto_ptr< database_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27009:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 27009 | scoreType (::std::auto_ptr< scoreType_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27164:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 27164 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27316:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 27316 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27468:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 27468 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27620:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 27620 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27773:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 27773 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27925:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 27925 | feature (::std::auto_ptr< feature_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28001:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28001 | condensedReferences (::std::auto_ptr< condensedReferences_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28088:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28088 | annotation1 (::std::auto_ptr< feature_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28471:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28471 | method (::std::auto_ptr< method_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28547:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28547 | methodIdRef (::std::auto_ptr< methodIdRef_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28623:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28623 | ontology (::std::auto_ptr< ontology_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28699:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28699 | ontologyIdRef (::std::auto_ptr< ontologyIdRef_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28775:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28775 | database (::std::auto_ptr< database_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28851:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28851 | databaseIdRef (::std::auto_ptr< databaseIdRef_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28927:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28927 | scoreType (::std::auto_ptr< scoreType_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:29003:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 29003 | scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:29244:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 29244 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:22916:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 22916 | relationName (::std::auto_ptr< relationName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:29415:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 29415 | relationName (::std::auto_ptr< relationName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from BioXSD-1.1_xsd.cxx:41: BioXSD-1.1_xsd.hxx:29826:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 29826 | localIdRef (::std::auto_ptr< localIdRef_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:23505:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 23505 | canonicalVariant (::std::auto_ptr< canonicalVariant_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:23645:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 23645 | missing (::std::auto_ptr< missing_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:23787:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 23787 | position (::std::auto_ptr< position_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:23961:34: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 23961 | alignmentOfReference (::std::auto_ptr< alignmentOfReference_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24019:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24019 | alignedSequence (::std::auto_ptr< alignedSequence_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24042:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24042 | alignment (::std::auto_ptr< alignedSequence_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24200:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24200 | sequenceRecord (::std::auto_ptr< sequenceRecord_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24276:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24276 | sequenceReference (::std::auto_ptr< sequenceReference_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24352:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24352 | sequenceName (::std::auto_ptr< sequenceName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24428:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24428 | species (::std::auto_ptr< species_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24504:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24504 | genomeBuild (::std::auto_ptr< genomeBuild_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24580:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24580 | chromosome (::std::auto_ptr< chromosome_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24658:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24658 | subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24734:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24734 | variantAccession (::std::auto_ptr< variantAccession_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24810:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24810 | variantNote (::std::auto_ptr< variantNote_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24970:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24970 | feature (::std::auto_ptr< feature_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:25046:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 25046 | condensedReferences (::std::auto_ptr< condensedReferences_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:25133:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 25133 | annotation (::std::auto_ptr< feature_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:110:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 110 | sequence (::std::auto_ptr< sequence_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:140:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 140 | species (::std::auto_ptr< species_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:170:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 170 | reference (::std::auto_ptr< reference_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:200:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 200 | name (::std::auto_ptr< name_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:230:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 230 | note (::std::auto_ptr< note_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:260:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 260 | translationData (::std::auto_ptr< translationData_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:290:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 290 | inlineBaseQuality (::std::auto_ptr< inlineBaseQuality_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:376:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 376 | note (::std::auto_ptr< note_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:25778:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 25778 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:420:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 420 | pos (::std::auto_ptr< pos_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:25932:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 25932 | code (::std::auto_ptr< code_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:444:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 444 | len (::std::auto_ptr< len_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26122:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 26122 | aminoacid (::std::auto_ptr< aminoacid_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:478:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 478 | min (::std::auto_ptr< min_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26253:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 26253 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ BioXSD-1.1_xsd.cxx:508:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 508 | max (::std::auto_ptr< max_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:538:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 538 | strand (::std::auto_ptr< strand_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:562:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 562 | minCertainty (::std::auto_ptr< minCertainty_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:592:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 592 | maxCertainty (::std::auto_ptr< maxCertainty_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:634:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 634 | pos (::std::auto_ptr< pos_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26781:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 26781 | method (::std::auto_ptr< method_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:658:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 658 | bases (::std::auto_ptr< bases_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26857:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 26857 | ontology (::std::auto_ptr< ontology_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26933:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 26933 | database (::std::auto_ptr< database_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:692:34: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 692 | localAlignmentPosition (::std::auto_ptr< localAlignmentPosition_type > x) | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27009:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 27009 | scoreType (::std::auto_ptr< scoreType_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:722:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 722 | sequenceRecord (::std::auto_ptr< sequenceRecord_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:752:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 752 | sequenceReference (::std::auto_ptr< sequenceReference_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27164:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 27164 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ BioXSD-1.1_xsd.cxx:782:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 782 | sequenceName (::std::auto_ptr< sequenceName_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:812:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 812 | species (::std::auto_ptr< species_type > x) | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27316:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 27316 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27468:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 27468 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27620:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 27620 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27773:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 27773 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:842:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 842 | genomeBuild (::std::auto_ptr< genomeBuild_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27925:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 27925 | feature (::std::auto_ptr< feature_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28001:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28001 | condensedReferences (::std::auto_ptr< condensedReferences_type > p); | ^~~~~~~~ BioXSD-1.1_xsd.cxx:872:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 872 | chromosome (::std::auto_ptr< chromosome_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:902:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 902 | subsequencePosition (::std::auto_ptr< subsequencePosition_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28088:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28088 | annotation1 (::std::auto_ptr< feature_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:932:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 932 | variantAccession (::std::auto_ptr< variantAccession_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:962:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 962 | variantNote (::std::auto_ptr< variantNote_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28471:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28471 | method (::std::auto_ptr< method_type > p); | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1046:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1046 | reversedDirection (::std::auto_ptr< reversedDirection_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1114:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1114 | name (::std::auto_ptr< name_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1180:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1180 | className (::std::auto_ptr< className_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1228:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1228 | properties (::std::auto_ptr< properties_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1262:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1262 | specificFeatureName (::std::auto_ptr< specificFeatureName_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1346:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1346 | note (::std::auto_ptr< note_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1398:34: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1398 | appliesToWholeSequence (::std::auto_ptr< appliesToWholeSequence_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28547:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28547 | methodIdRef (::std::auto_ptr< methodIdRef_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28623:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28623 | ontology (::std::auto_ptr< ontology_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28699:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28699 | ontologyIdRef (::std::auto_ptr< ontologyIdRef_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28775:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28775 | database (::std::auto_ptr< database_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28851:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28851 | databaseIdRef (::std::auto_ptr< databaseIdRef_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28927:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28927 | scoreType (::std::auto_ptr< scoreType_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:29003:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 29003 | scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1428:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1428 | position (::std::auto_ptr< position_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1476:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1476 | occurrenceName (::std::auto_ptr< occurrenceName_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1506:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1506 | occurrenceNote (::std::auto_ptr< occurrenceNote_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:29244:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 29244 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1536:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1536 | featureTypeDetails (::std::auto_ptr< featureTypeDetails_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:29415:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 29415 | relationName (::std::auto_ptr< relationName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1602:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1602 | frame (::std::auto_ptr< frame_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1632:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1632 | phase (::std::auto_ptr< phase_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1680:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1680 | alignment (::std::auto_ptr< alignment_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1708:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1708 | referenceSequence (::std::auto_ptr< referenceSequence_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1778:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1778 | predicted (::std::auto_ptr< predicted_type > x) | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from freecontact_input_xsd.cxx:41: BioXSD-1.1_xsd.hxx:29826:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 29826 | localIdRef (::std::auto_ptr< localIdRef_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1808:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1808 | experimental (::std::auto_ptr< experimental_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1836:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1836 | method (::std::auto_ptr< method_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1882:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1882 | methodIdRef (::std::auto_ptr< methodIdRef_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1934:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1934 | method (::std::auto_ptr< method_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:1964:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1964 | methodIdRef (::std::auto_ptr< methodIdRef_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2012:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2012 | verdict (::std::auto_ptr< verdict_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2040:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2040 | dataReference (::std::auto_ptr< dataReference_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2088:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2088 | verdict (::std::auto_ptr< verdict_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2118:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2118 | reliability (::std::auto_ptr< reliability_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2206:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2206 | name (::std::auto_ptr< name_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2236:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2236 | index (::std::auto_ptr< index_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2266:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2266 | unit (::std::auto_ptr< unit_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2296:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2296 | note (::std::auto_ptr< note_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2330:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2330 | position (::std::auto_ptr< position_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2354:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2354 | value (::std::auto_ptr< value_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2384:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2384 | scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2418:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2418 | pos (::std::auto_ptr< pos_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2448:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2448 | strand (::std::auto_ptr< strand_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2472:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2472 | certainty (::std::auto_ptr< certainty_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2516:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2516 | pos (::std::auto_ptr< pos_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2546:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2546 | strand (::std::auto_ptr< strand_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2570:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2570 | certainty (::std::auto_ptr< certainty_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2614:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2614 | pos (::std::auto_ptr< pos_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2644:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2644 | strand (::std::auto_ptr< strand_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2668:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2668 | certainty (::std::auto_ptr< certainty_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2712:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2712 | min (::std::auto_ptr< min_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2742:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2742 | max (::std::auto_ptr< max_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2772:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2772 | strand (::std::auto_ptr< strand_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2796:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2796 | minCertainty (::std::auto_ptr< minCertainty_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2826:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2826 | maxCertainty (::std::auto_ptr< maxCertainty_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2870:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2870 | max (::std::auto_ptr< max_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2894:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2894 | certainty (::std::auto_ptr< certainty_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41: freecontact_input_xsd.hxx:723:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 723 | flat (::std::auto_ptr< flat_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41: freecontact_input_xsd.hxx:746:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 746 | FcAlignment (::std::auto_ptr< flat_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:2956:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2956 | insertion (::std::auto_ptr< insertion_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41: freecontact_input_xsd.hxx:847:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 847 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3004:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3004 | nextPoint (::std::auto_ptr< nextPoint_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41: freecontact_input_xsd.hxx:863:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 863 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41: freecontact_input_xsd.hxx:881:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 881 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41: freecontact_input_xsd.hxx:897:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 897 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41: freecontact_input_xsd.hxx:913:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 913 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41: freecontact_input_xsd.hxx:931:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 931 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41: freecontact_input_xsd.hxx:951:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 951 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41: freecontact_input_xsd.hxx:973:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 973 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41: freecontact_input_xsd.hxx:996:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 996 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41: freecontact_input_xsd.hxx:1013:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1013 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41: freecontact_input_xsd.hxx:1029:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1029 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3034:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3034 | nextPartition (::std::auto_ptr< nextPartition_type > x) | ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41: freecontact_input_xsd.hxx:1047:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1047 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41: freecontact_input_xsd.hxx:1061:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1061 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.cxx:41: freecontact_input_xsd.hxx:1078:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1078 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3064:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3064 | samePoint (::std::auto_ptr< samePoint_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3094:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3094 | samePartition (::std::auto_ptr< samePartition_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3124:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3124 | outside (::std::auto_ptr< outside_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:1507:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1507 | sequence (::std::auto_ptr< sequence_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:1585:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1585 | species (::std::auto_ptr< species_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3162:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3162 | correspondance (::std::auto_ptr< correspondance_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:1665:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1665 | reference (::std::auto_ptr< reference_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:1741:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1741 | name (::std::auto_ptr< name_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:1817:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1817 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:1893:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1893 | translationData (::std::auto_ptr< translationData_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3210:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3210 | insertion (::std::auto_ptr< insertion_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:1969:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1969 | inlineBaseQuality (::std::auto_ptr< inlineBaseQuality_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:1992:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1992 | BiosequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3258:37: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3258 | explicitSequenceReference (::std::auto_ptr< explicitSequenceReference_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3296:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3296 | reference (::std::auto_ptr< reference_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3348:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3348 | geneticCode (::std::auto_ptr< geneticCode_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3378:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3378 | phase (::std::auto_ptr< phase_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3408:40: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3408 | reversedTranslationDirection (::std::auto_ptr< reversedTranslationDirection_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:2105:45: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2105 | GeneralNucleotideSequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3446:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3446 | dbName (::std::auto_ptr< dbName_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:2186:44: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2186 | GeneralAminoacidSequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:2267:38: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2267 | NucleotideSequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3476:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3476 | dbUri (::std::auto_ptr< dbUri_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:2348:37: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2348 | AminoacidSequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3506:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3506 | dbVersion (::std::auto_ptr< dbVersion_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3560:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3560 | wsdl (::std::auto_ptr< wsdl_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:2611:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2611 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3590:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3590 | wsdlService (::std::auto_ptr< wsdlService_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3620:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3620 | wsdlPort (::std::auto_ptr< wsdlPort_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:3051:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3051 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:3109:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3109 | len (::std::auto_ptr< len_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3650:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3650 | webserviceOperation (::std::auto_ptr< webserviceOperation_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3680:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3680 | webserviceVersion (::std::auto_ptr< webserviceVersion_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:3287:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3287 | min (::std::auto_ptr< min_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:3366:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3366 | max (::std::auto_ptr< max_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3710:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3710 | webserviceDate (::std::auto_ptr< webserviceDate_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:3442:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3442 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:3500:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3500 | minCertainty (::std::auto_ptr< minCertainty_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3744:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3744 | accession (::std::auto_ptr< accession_type > x) | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:3567:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3567 | maxCertainty (::std::auto_ptr< maxCertainty_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3774:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3774 | entryUri (::std::auto_ptr< entryUri_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3804:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3804 | entryVersion (::std::auto_ptr< entryVersion_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3834:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3834 | date (::std::auto_ptr< date_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:3877:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3877 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3868:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3868 | ontologyName (::std::auto_ptr< ontologyName_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:3935:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3935 | bases (::std::auto_ptr< bases_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3898:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3898 | ontologyUri (::std::auto_ptr< ontologyUri_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3928:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3928 | ontologyVersion (::std::auto_ptr< ontologyVersion_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:4110:36: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4110 | localAlignmentPosition (::std::auto_ptr< localAlignmentPosition_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:4186:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4186 | sequenceRecord (::std::auto_ptr< sequenceRecord_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:3986:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3986 | accession (::std::auto_ptr< accession_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:4262:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4262 | sequenceReference (::std::auto_ptr< sequenceReference_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:4338:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4338 | sequenceName (::std::auto_ptr< sequenceName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4016:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4016 | conceptUri (::std::auto_ptr< conceptUri_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:4414:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4414 | species (::std::auto_ptr< species_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4046:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4046 | term (::std::auto_ptr< term_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:4490:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4490 | genomeBuild (::std::auto_ptr< genomeBuild_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:4566:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4566 | chromosome (::std::auto_ptr< chromosome_type > p); | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4080:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4080 | speciesName (::std::auto_ptr< speciesName_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:4644:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4644 | subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4110:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4110 | speciesNote (::std::auto_ptr< speciesNote_type > x) | ^~~~~~~~ freecontact_input_xsd.cxx:67:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 67 | flat (::std::auto_ptr< flat_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:4720:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4720 | variantAccession (::std::auto_ptr< variantAccession_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:4796:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4796 | variantNote (::std::auto_ptr< variantNote_type > p); | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4144:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4144 | subsequencePosition (::std::auto_ptr< subsequencePosition_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4174:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4174 | supersequence (::std::auto_ptr< supersequence_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4204:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4204 | supersequenceName (::std::auto_ptr< supersequenceName_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4234:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4234 | sequenceVersion (::std::auto_ptr< sequenceVersion_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4264:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4264 | variantAccession (::std::auto_ptr< variantAccession_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4294:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4294 | variantNote (::std::auto_ptr< variantNote_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4358:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4358 | name (::std::auto_ptr< name_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:5064:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 5064 | reversedDirection (::std::auto_ptr< reversedDirection_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4388:15: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4388 | uri (::std::auto_ptr< uri_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4418:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4418 | version (::std::auto_ptr< version_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4448:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4448 | date (::std::auto_ptr< date_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4478:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4478 | wsdl (::std::auto_ptr< wsdl_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4508:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4508 | wsdlService (::std::auto_ptr< wsdlService_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4538:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4538 | wsdlPort (::std::auto_ptr< wsdlPort_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4568:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4568 | webserviceOperation (::std::auto_ptr< webserviceOperation_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4598:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4598 | webserviceVersion (::std::auto_ptr< webserviceVersion_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:4628:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4628 | webserviceDate (::std::auto_ptr< webserviceDate_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:5589:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 5589 | name (::std::auto_ptr< name_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:5798:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 5798 | className (::std::auto_ptr< className_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:5938:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 5938 | properties (::std::auto_ptr< properties_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:6115:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6115 | specificFeatureName (::std::auto_ptr< specificFeatureName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:6385:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6385 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:6627:36: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6627 | appliesToWholeSequence (::std::auto_ptr< appliesToWholeSequence_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:6703:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6703 | position (::std::auto_ptr< position_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:6843:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6843 | occurrenceName (::std::auto_ptr< occurrenceName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:6919:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6919 | occurrenceNote (::std::auto_ptr< occurrenceNote_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:6995:32: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6995 | featureTypeDetails (::std::auto_ptr< featureTypeDetails_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:7203:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7203 | frame (::std::auto_ptr< frame_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:7279:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7279 | phase (::std::auto_ptr< phase_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:7419:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7419 | alignment (::std::auto_ptr< alignment_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5311:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 5311 | relationName (::std::auto_ptr< relationName_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5439:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 5439 | canonicalVariant (::std::auto_ptr< canonicalVariant_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:7588:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7588 | referenceSequence (::std::auto_ptr< referenceSequence_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5487:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 5487 | missing (::std::auto_ptr< missing_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5535:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 5535 | position (::std::auto_ptr< position_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5569:32: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 5569 | alignmentOfReference (::std::auto_ptr< alignmentOfReference_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5593:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 5593 | alignedSequence (::std::auto_ptr< alignedSequence_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5627:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 5627 | sequenceRecord (::std::auto_ptr< sequenceRecord_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5657:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 5657 | sequenceReference (::std::auto_ptr< sequenceReference_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:7742:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7742 | FeatureRecord (::std::auto_ptr< referenceSequence_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5687:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 5687 | sequenceName (::std::auto_ptr< sequenceName_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5717:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 5717 | species (::std::auto_ptr< species_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:7901:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7901 | predicted (::std::auto_ptr< predicted_type > p); | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5747:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 5747 | genomeBuild (::std::auto_ptr< genomeBuild_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:7977:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7977 | experimental (::std::auto_ptr< experimental_type > p); | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5777:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 5777 | chromosome (::std::auto_ptr< chromosome_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5807:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 5807 | subsequencePosition (::std::auto_ptr< subsequencePosition_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5837:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 5837 | variantAccession (::std::auto_ptr< variantAccession_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5867:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 5867 | variantNote (::std::auto_ptr< variantNote_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:8130:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8130 | method (::std::auto_ptr< method_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:8217:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8217 | MethodResult (::std::auto_ptr< method_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5895:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 5895 | feature (::std::auto_ptr< feature_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:8357:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8357 | methodIdRef (::std::auto_ptr< methodIdRef_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:8444:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8444 | Result (::std::auto_ptr< methodIdRef_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:5925:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 5925 | condensedReferences (::std::auto_ptr< condensedReferences_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:8602:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8602 | method (::std::auto_ptr< method_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:8678:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8678 | methodIdRef (::std::auto_ptr< methodIdRef_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:8818:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8818 | verdict (::std::auto_ptr< verdict_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6089:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6089 | localId (::std::auto_ptr< localId_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6117:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6117 | code (::std::auto_ptr< code_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:8973:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8973 | dataReference (::std::auto_ptr< dataReference_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:9113:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9113 | verdict (::std::auto_ptr< verdict_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:9189:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9189 | reliability (::std::auto_ptr< reliability_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:9212:34: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9212 | ExperimentalEvidence (::std::auto_ptr< dataReference_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6195:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6195 | aminoacid (::std::auto_ptr< aminoacid_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6249:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6249 | note (::std::auto_ptr< note_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6359:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6359 | method (::std::auto_ptr< method_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6389:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6389 | ontology (::std::auto_ptr< ontology_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:9566:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9566 | name (::std::auto_ptr< name_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:9642:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9642 | index (::std::auto_ptr< index_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:9718:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9718 | unit (::std::auto_ptr< unit_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6419:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6419 | database (::std::auto_ptr< database_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:9794:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9794 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6449:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6449 | scoreType (::std::auto_ptr< scoreType_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:9974:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9974 | position (::std::auto_ptr< position_type > p); | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6477:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6477 | localId (::std::auto_ptr< localId_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:10032:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10032 | value (::std::auto_ptr< value_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6505:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6505 | localId (::std::auto_ptr< localId_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:10108:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10108 | scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6533:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6533 | localId (::std::auto_ptr< localId_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6561:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6561 | localId (::std::auto_ptr< localId_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:10285:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10285 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6589:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6589 | localId (::std::auto_ptr< localId_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:10361:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10361 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:10419:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10419 | certainty (::std::auto_ptr< certainty_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6617:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6617 | feature (::std::auto_ptr< feature_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:10679:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10679 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6647:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6647 | condensedReferences (::std::auto_ptr< condensedReferences_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:10755:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10755 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:10813:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10813 | certainty (::std::auto_ptr< certainty_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6707:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6707 | method (::std::auto_ptr< method_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6737:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6737 | methodIdRef (::std::auto_ptr< methodIdRef_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6767:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6767 | ontology (::std::auto_ptr< ontology_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6797:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6797 | ontologyIdRef (::std::auto_ptr< ontologyIdRef_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6827:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6827 | database (::std::auto_ptr< database_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6857:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6857 | databaseIdRef (::std::auto_ptr< databaseIdRef_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6887:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6887 | scoreType (::std::auto_ptr< scoreType_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6917:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6917 | scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:11072:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11072 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:11148:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11148 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:6969:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6969 | localId (::std::auto_ptr< localId_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:11206:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11206 | certainty (::std::auto_ptr< certainty_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7003:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7003 | relationName (::std::auto_ptr< relationName_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:11465:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11465 | min (::std::auto_ptr< min_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:11544:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11544 | max (::std::auto_ptr< max_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:11620:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11620 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:11678:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11678 | minCertainty (::std::auto_ptr< minCertainty_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:11745:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11745 | maxCertainty (::std::auto_ptr< maxCertainty_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7103:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7103 | localIdRef (::std::auto_ptr< localIdRef_type > x) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:12003:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12003 | max (::std::auto_ptr< max_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:12061:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12061 | certainty (::std::auto_ptr< certainty_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:12377:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12377 | insertion (::std::auto_ptr< insertion_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:12517:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12517 | nextPoint (::std::auto_ptr< nextPoint_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:12593:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12593 | nextPartition (::std::auto_ptr< nextPartition_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:12669:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12669 | samePoint (::std::auto_ptr< samePoint_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:12745:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12745 | samePartition (::std::auto_ptr< samePartition_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:12821:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12821 | outside (::std::auto_ptr< outside_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:13071:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13071 | correspondance (::std::auto_ptr< correspondance_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:13211:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13211 | insertion (::std::auto_ptr< insertion_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:13351:39: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13351 | explicitSequenceReference (::std::auto_ptr< explicitSequenceReference_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:13597:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13597 | reference (::std::auto_ptr< reference_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:13832:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13832 | geneticCode (::std::auto_ptr< geneticCode_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:13908:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13908 | phase (::std::auto_ptr< phase_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:13984:42: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13984 | reversedTranslationDirection (::std::auto_ptr< reversedTranslationDirection_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:14226:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14226 | dbName (::std::auto_ptr< dbName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:14304:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14304 | dbUri (::std::auto_ptr< dbUri_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:14380:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14380 | dbVersion (::std::auto_ptr< dbVersion_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:14511:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14511 | wsdl (::std::auto_ptr< wsdl_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:14587:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14587 | wsdlService (::std::auto_ptr< wsdlService_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:14663:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14663 | wsdlPort (::std::auto_ptr< wsdlPort_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:14739:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14739 | webserviceOperation (::std::auto_ptr< webserviceOperation_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:14815:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14815 | webserviceVersion (::std::auto_ptr< webserviceVersion_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:14894:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14894 | webserviceDate (::std::auto_ptr< webserviceDate_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:15075:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15075 | accession (::std::auto_ptr< accession_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:15151:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15151 | entryUri (::std::auto_ptr< entryUri_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:15227:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15227 | entryVersion (::std::auto_ptr< entryVersion_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:15305:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15305 | date (::std::auto_ptr< date_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:15481:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15481 | ontologyName (::std::auto_ptr< ontologyName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:15559:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15559 | ontologyUri (::std::auto_ptr< ontologyUri_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:15635:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15635 | ontologyVersion (::std::auto_ptr< ontologyVersion_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:15870:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15870 | accession (::std::auto_ptr< accession_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:15946:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15946 | conceptUri (::std::auto_ptr< conceptUri_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:16028:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16028 | term (::std::auto_ptr< term_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:16207:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16207 | speciesName (::std::auto_ptr< speciesName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:16283:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16283 | speciesNote (::std::auto_ptr< speciesNote_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:16459:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16459 | subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:16538:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16538 | supersequence (::std::auto_ptr< supersequence_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:16617:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16617 | supersequenceName (::std::auto_ptr< supersequenceName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:16693:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16693 | sequenceVersion (::std::auto_ptr< sequenceVersion_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:16769:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16769 | variantAccession (::std::auto_ptr< variantAccession_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:16845:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16845 | variantNote (::std::auto_ptr< variantNote_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:17130:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17130 | name (::std::auto_ptr< name_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:17206:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17206 | uri (::std::auto_ptr< uri_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:17282:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17282 | version (::std::auto_ptr< version_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:17358:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17358 | date (::std::auto_ptr< date_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:17434:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17434 | wsdl (::std::auto_ptr< wsdl_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:17510:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17510 | wsdlService (::std::auto_ptr< wsdlService_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:17586:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17586 | wsdlPort (::std::auto_ptr< wsdlPort_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:17662:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17662 | webserviceOperation (::std::auto_ptr< webserviceOperation_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:17738:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17738 | webserviceVersion (::std::auto_ptr< webserviceVersion_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:17817:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17817 | webserviceDate (::std::auto_ptr< webserviceDate_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:22916:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 22916 | relationName (::std::auto_ptr< relationName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:23505:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 23505 | canonicalVariant (::std::auto_ptr< canonicalVariant_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:23645:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 23645 | missing (::std::auto_ptr< missing_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:23787:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 23787 | position (::std::auto_ptr< position_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:23961:34: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 23961 | alignmentOfReference (::std::auto_ptr< alignmentOfReference_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24019:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24019 | alignedSequence (::std::auto_ptr< alignedSequence_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24042:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24042 | alignment (::std::auto_ptr< alignedSequence_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24200:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24200 | sequenceRecord (::std::auto_ptr< sequenceRecord_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24276:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24276 | sequenceReference (::std::auto_ptr< sequenceReference_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24352:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24352 | sequenceName (::std::auto_ptr< sequenceName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24428:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24428 | species (::std::auto_ptr< species_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24504:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24504 | genomeBuild (::std::auto_ptr< genomeBuild_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24580:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24580 | chromosome (::std::auto_ptr< chromosome_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24658:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24658 | subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24734:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24734 | variantAccession (::std::auto_ptr< variantAccession_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24810:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24810 | variantNote (::std::auto_ptr< variantNote_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:24970:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24970 | feature (::std::auto_ptr< feature_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:25046:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 25046 | condensedReferences (::std::auto_ptr< condensedReferences_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:25133:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 25133 | annotation (::std::auto_ptr< feature_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx:97:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 97 | FcAlignment (::std::auto_ptr< flat_type > flat) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:25778:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 25778 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx: In member function ‘void freecontact_input_xsd::FcAlignment::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: freecontact_input_xsd.cxx:139:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 139 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:25932:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 25932 | code (::std::auto_ptr< code_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:26122:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 26122 | aminoacid (::std::auto_ptr< aminoacid_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:26253:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 26253 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:26781:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 26781 | method (::std::auto_ptr< method_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:26857:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 26857 | ontology (::std::auto_ptr< ontology_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:26933:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 26933 | database (::std::auto_ptr< database_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:27009:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 27009 | scoreType (::std::auto_ptr< scoreType_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:27164:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 27164 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:27316:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 27316 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:27468:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 27468 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:27620:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 27620 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:27773:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 27773 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:27925:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 27925 | feature (::std::auto_ptr< feature_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:28001:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28001 | condensedReferences (::std::auto_ptr< condensedReferences_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:28088:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28088 | annotation1 (::std::auto_ptr< feature_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:28471:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28471 | method (::std::auto_ptr< method_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:28547:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28547 | methodIdRef (::std::auto_ptr< methodIdRef_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:28623:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28623 | ontology (::std::auto_ptr< ontology_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:28699:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28699 | ontologyIdRef (::std::auto_ptr< ontologyIdRef_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:28775:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28775 | database (::std::auto_ptr< database_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:28851:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28851 | databaseIdRef (::std::auto_ptr< databaseIdRef_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:28927:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28927 | scoreType (::std::auto_ptr< scoreType_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:29003:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 29003 | scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:29244:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 29244 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:29415:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 29415 | relationName (::std::auto_ptr< relationName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_input_xsd.hxx:646, from _write_bioxsd.cpp:20: BioXSD-1.1_xsd.hxx:29826:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 29826 | localIdRef (::std::auto_ptr< localIdRef_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from _write_bioxsd.cpp:20: freecontact_input_xsd.hxx:723:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 723 | flat (::std::auto_ptr< flat_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from _write_bioxsd.cpp:20: freecontact_input_xsd.hxx:746:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 746 | FcAlignment (::std::auto_ptr< flat_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from _write_bioxsd.cpp:20: freecontact_input_xsd.hxx:847:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 847 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from _write_bioxsd.cpp:20: freecontact_input_xsd.hxx:863:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 863 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from _write_bioxsd.cpp:20: freecontact_input_xsd.hxx:881:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 881 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from _write_bioxsd.cpp:20: freecontact_input_xsd.hxx:897:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 897 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from _write_bioxsd.cpp:20: freecontact_input_xsd.hxx:913:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 913 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from _write_bioxsd.cpp:20: freecontact_input_xsd.hxx:931:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 931 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from _write_bioxsd.cpp:20: freecontact_input_xsd.hxx:951:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 951 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from _write_bioxsd.cpp:20: freecontact_input_xsd.hxx:973:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 973 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ freecontact_input_xsd.cxx:150:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 150 | ::std::auto_ptr< flat_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from _write_bioxsd.cpp:20: freecontact_input_xsd.hxx:996:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 996 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from _write_bioxsd.cpp:20: freecontact_input_xsd.hxx:1013:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1013 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from _write_bioxsd.cpp:20: freecontact_input_xsd.hxx:1029:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1029 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from _write_bioxsd.cpp:20: freecontact_input_xsd.hxx:1047:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1047 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from _write_bioxsd.cpp:20: freecontact_input_xsd.hxx:1061:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1061 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from _write_bioxsd.cpp:20: freecontact_input_xsd.hxx:1078:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1078 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7570:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7570 | BiosequenceRecord (::std::auto_ptr< sequence_type > sequence) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::BiosequenceRecord::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:7630:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7630 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx: At global scope: freecontact_input_xsd.cxx:212:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 212 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7641:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7641 | ::std::auto_ptr< sequence_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7658:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7658 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx: In function ‘std::auto_ptr freecontact_input_xsd::alignment(const string&, xml_schema::flags, const properties&)’: freecontact_input_xsd.cxx:229:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 229 | return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7669:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7669 | ::std::auto_ptr< species_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx: At global scope: freecontact_input_xsd.cxx:234:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 234 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7686:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7686 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from _write_bioxsd.cpp:21: freecontact_output_xsd.hxx:681:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 681 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from _write_bioxsd.cpp:21: freecontact_output_xsd.hxx:697:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 697 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from _write_bioxsd.cpp:21: freecontact_output_xsd.hxx:715:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 715 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from _write_bioxsd.cpp:21: freecontact_output_xsd.hxx:731:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 731 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from _write_bioxsd.cpp:21: freecontact_output_xsd.hxx:747:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 747 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from _write_bioxsd.cpp:21: freecontact_output_xsd.hxx:765:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 765 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7697:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7697 | ::std::auto_ptr< reference_type > r ( | ^~~~~~~~ In file included from _write_bioxsd.cpp:21: freecontact_output_xsd.hxx:785:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 785 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from _write_bioxsd.cpp:21: freecontact_output_xsd.hxx:807:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 807 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from _write_bioxsd.cpp:21: freecontact_output_xsd.hxx:830:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 830 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from _write_bioxsd.cpp:21: freecontact_output_xsd.hxx:847:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 847 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from _write_bioxsd.cpp:21: freecontact_output_xsd.hxx:863:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 863 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from _write_bioxsd.cpp:21: freecontact_output_xsd.hxx:881:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 881 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7714:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7714 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from _write_bioxsd.cpp:21: freecontact_output_xsd.hxx:895:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 895 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from _write_bioxsd.cpp:21: freecontact_output_xsd.hxx:912:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 912 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7725:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7725 | ::std::auto_ptr< name_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7742:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7742 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7753:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7753 | ::std::auto_ptr< note_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7770:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7770 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7781:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7781 | ::std::auto_ptr< translationData_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7798:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7798 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7809:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7809 | ::std::auto_ptr< inlineBaseQuality_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx: In function ‘std::auto_ptr freecontact_input_xsd::alignment(const string&, xml_schema::error_handler&, xml_schema::flags, const properties&)’: freecontact_input_xsd.cxx:251:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 251 | return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx: At global scope: freecontact_input_xsd.cxx:256:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 256 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx: In function ‘std::auto_ptr freecontact_input_xsd::alignment(const string&, xercesc_3_2::DOMErrorHandler&, xml_schema::flags, const properties&)’: freecontact_input_xsd.cxx:269:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 269 | return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx: At global scope: freecontact_input_xsd.cxx:274:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 274 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx:287:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 287 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx:301:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 301 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx:311:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 311 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: At global scope: BioXSD-1.1_xsd.cxx:7880:43: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7880 | GeneralNucleotideSequenceRecord (::std::auto_ptr< sequence_type > sequence) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx:325:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 325 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx:340:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 340 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7929:42: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7929 | GeneralAminoacidSequenceRecord (::std::auto_ptr< sequence_type > sequence) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:7978:36: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7978 | NucleotideSequenceRecord (::std::auto_ptr< sequence_type > sequence) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:8027:35: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8027 | AminoacidSequenceRecord (::std::auto_ptr< sequence_type > sequence) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx:351:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 351 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx: In function ‘std::auto_ptr freecontact_input_xsd::alignment(xercesc_3_2::InputSource&, xml_schema::flags, const properties&)’: freecontact_input_xsd.cxx:364:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 364 | return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx: At global scope: freecontact_input_xsd.cxx:369:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 369 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx: In function ‘std::auto_ptr freecontact_input_xsd::alignment(xercesc_3_2::InputSource&, xml_schema::error_handler&, xml_schema::flags, const properties&)’: freecontact_input_xsd.cxx:382:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 382 | return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx: At global scope: freecontact_input_xsd.cxx:387:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 387 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx: In function ‘std::auto_ptr freecontact_input_xsd::alignment(xercesc_3_2::InputSource&, xercesc_3_2::DOMErrorHandler&, xml_schema::flags, const properties&)’: freecontact_input_xsd.cxx:400:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 400 | return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx: At global scope: freecontact_input_xsd.cxx:405:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 405 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx: In function ‘std::auto_ptr freecontact_input_xsd::alignment(const xercesc_3_2::DOMDocument&, xml_schema::flags, const properties&)’: freecontact_input_xsd.cxx:415:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 415 | return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::BiosequenceAlignment::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:8118:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8118 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx:424:12: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 424 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx:433:14: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 433 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:8127:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8127 | ::std::auto_ptr< alignedBy_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact.cpp:25: ../lib/freecontact.h:69:54: warning: ignoring attributes on template argument ‘freecontact::__m128i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes] 69 | class LIBFREEC_API ali_t : public std::vector<__m128i> | ^ BioXSD-1.1_xsd.cxx:8143:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8143 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:8152:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8152 | ::std::auto_ptr< alignedSequence_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:8168:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8168 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:8179:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8179 | ::std::auto_ptr< note_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx: At global scope: freecontact_input_xsd.cxx:451:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 451 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx: In function ‘std::auto_ptr freecontact_input_xsd::alignment(xsd::cxx::xml::dom::auto_ptr, xml_schema::flags, const properties&)’: freecontact_input_xsd.cxx:473:12: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 473 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_input_xsd.cxx:483:14: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 483 | ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_input_xsd.hxx:66, from freecontact_input_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact.cpp:25: ../lib/freecontact.h:113:56: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 113 | ali_t& push(const std::vector& __al) throw (alilen_error); | ^~~~~ ../lib/freecontact.h:116:50: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 116 | inline ali_t& push(const std::string& __l) throw (alilen_error) | ^~~~~ In file included from freecontact.cpp:25: ../lib/freecontact.h: In constructor ‘freecontact::ali_t::ali_t(uint16_t)’: ../lib/freecontact.h:80:79: warning: ignoring attributes on template argument ‘freecontact::__m128i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes] 80 | ali_t( const uint16_t __alilen = 0 ) : std::vector<__m128i>(), seqcnt(0), alilen(__alilen), alilen16(( alilen-1 )/16 + 1), alilenpad( 16 * alilen16 ) | ^ In file included from freecontact.cpp:25: ../lib/freecontact.h: At global scope: ../lib/freecontact.h:185:23: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 185 | ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error); | ^~~~~ ../lib/freecontact.h:219:23: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 219 | ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error); | ^~~~~ ../lib/freecontact.h:227:23: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 227 | ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error); | ^~~~~ ../lib/freecontact.h:234:23: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 234 | ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error) | ^~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::AlignedBiosequence::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:8924:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8924 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:8935:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8935 | ::std::auto_ptr< localAlignmentPosition_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:8952:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8952 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:8963:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8963 | ::std::auto_ptr< sequenceRecord_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:8980:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8980 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:8991:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8991 | ::std::auto_ptr< sequenceReference_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9008:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9008 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9019:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9019 | ::std::auto_ptr< sequenceName_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9036:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9036 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9047:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9047 | ::std::auto_ptr< species_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9064:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9064 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9075:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9075 | ::std::auto_ptr< genomeBuild_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9092:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9092 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9103:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9103 | ::std::auto_ptr< chromosome_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9120:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9120 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9131:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9131 | ::std::auto_ptr< subsequencePosition_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9148:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9148 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9159:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9159 | ::std::auto_ptr< variantAccession_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9176:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9176 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9187:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9187 | ::std::auto_ptr< variantNote_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9204:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9204 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9213:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9213 | ::std::auto_ptr< gap_type > r ( | ^~~~~~~~ In file included from _write_bioxsd.cpp:22: ../lib/freecontact.h:69:54: warning: ignoring attributes on template argument ‘freecontact::__m128i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes] 69 | class LIBFREEC_API ali_t : public std::vector<__m128i> | ^ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9229:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9229 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9238:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9238 | ::std::auto_ptr< insert_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9254:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9254 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9263:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9263 | ::std::auto_ptr< frameshift_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9279:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9279 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9290:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9290 | ::std::auto_ptr< reversedDirection_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9307:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9307 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9316:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9316 | ::std::auto_ptr< sequenceScore_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from _write_bioxsd.cpp:22: ../lib/freecontact.h:113:56: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 113 | ali_t& push(const std::vector& __al) throw (alilen_error); | ^~~~~ ../lib/freecontact.h:116:50: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 116 | inline ali_t& push(const std::string& __l) throw (alilen_error) | ^~~~~ In file included from _write_bioxsd.cpp:22: ../lib/freecontact.h: In constructor ‘freecontact::ali_t::ali_t(uint16_t)’: ../lib/freecontact.h:80:79: warning: ignoring attributes on template argument ‘freecontact::__m128i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes] 80 | ali_t( const uint16_t __alilen = 0 ) : std::vector<__m128i>(), seqcnt(0), alilen(__alilen), alilen16(( alilen-1 )/16 + 1), alilenpad( 16 * alilen16 ) | ^ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::FeatureType::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:9610:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9610 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9621:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9621 | ::std::auto_ptr< name_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9638:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9638 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9647:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9647 | ::std::auto_ptr< equalConcept_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from _write_bioxsd.cpp:22: ../lib/freecontact.h: At global scope: ../lib/freecontact.h:185:23: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 185 | ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error); | ^~~~~ ../lib/freecontact.h:219:23: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 219 | ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error); | ^~~~~ BioXSD-1.1_xsd.cxx:9663:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9663 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ ../lib/freecontact.h:227:23: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 227 | ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error); | ^~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ ../lib/freecontact.h:234:23: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 234 | ) throw (alilen_error, icme_timeout_error, std::range_error, std::runtime_error) | ^~~~~ BioXSD-1.1_xsd.cxx:9672:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9672 | ::std::auto_ptr< equalAlias_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9688:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9688 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9699:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9699 | ::std::auto_ptr< className_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9716:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9716 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9725:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9725 | ::std::auto_ptr< classConcept_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact.cpp: In function ‘int main(int, char**)’: freecontact.cpp:165:9: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 165 | auto_ptr ali_ifs_p; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/boost/function/function_base.hpp:16, from /usr/include/boost/function/detail/prologue.hpp:17, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:22, from /usr/include/boost/function/function1.hpp:11, from /usr/include/boost/program_options/value_semantic.hpp:13, from /usr/include/boost/program_options/options_description.hpp:13, from /usr/include/boost/program_options.hpp:15, from freecontact.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9741:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9741 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact.cpp:169:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 169 | ali_ifs_p = auto_ptr(new std::ifstream(vm["ali"].as().c_str())); | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9752:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9752 | ::std::auto_ptr< properties_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/boost/function/function_base.hpp:16, from /usr/include/boost/function/detail/prologue.hpp:17, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:22, from /usr/include/boost/function/function1.hpp:11, from /usr/include/boost/program_options/value_semantic.hpp:13, from /usr/include/boost/program_options/options_description.hpp:13, from /usr/include/boost/program_options.hpp:15, from freecontact.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::FeatureTypeDetails::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:9866:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9866 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9877:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9877 | ::std::auto_ptr< specificFeatureName_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9894:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9894 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9903:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9903 | ::std::auto_ptr< specificFeatureConcept_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9919:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9919 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9928:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9928 | ::std::auto_ptr< specificFeatureAlias_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9944:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9944 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9953:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9953 | ::std::auto_ptr< databaseEntry_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9969:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9969 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9980:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9980 | ::std::auto_ptr< note_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:9998:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9998 | ::std::auto_ptr< association_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:30:1: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 30 | auto_ptr _get_bxScore(const fc::contact_t& __ct, const std::string& __scid); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp: In function ‘std::string _xml_flatali(std::istream&, bool)’: _write_bioxsd.cpp:38:9: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 38 | auto_ptr xml( fix::alignment(__is) ); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::FeatureOccurrenceData::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:10123:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10123 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10134:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10134 | ::std::auto_ptr< appliesToWholeSequence_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10151:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10151 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10162:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10162 | ::std::auto_ptr< position_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10179:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10179 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10188:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10188 | ::std::auto_ptr< occurrenceEntryReference_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10204:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10204 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp: In function ‘void _write_bioxsd(const freecontact::ali_t&, const resn_mapper_t&, const std::map, std::vector >&, bool)’: _write_bioxsd.cpp:53:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 53 | auto_ptr seqSeg_p(new BioXSD::SequenceSegment()); | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10215:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10215 | ::std::auto_ptr< occurrenceName_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10232:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10232 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10243:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10243 | ::std::auto_ptr< occurrenceNote_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10260:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10260 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10271:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10271 | ::std::auto_ptr< featureTypeDetails_type > r ( | ^~~~~~~~ _write_bioxsd.cpp:56:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 56 | auto_ptr seqPos_p(new BioXSD::SequencePosition()); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:59:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 59 | auto_ptr seqRef_p(new BioXSD::SequenceReference()); | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10288:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10288 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10297:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10297 | ::std::auto_ptr< score_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:63:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 63 | auto_ptr seqRec_p( new BioXSD::GeneralAminoacidSequenceRecord( BioXSD::GeneralAminoacidSequence( ucq ))); | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10313:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10313 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10322:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10322 | ::std::auto_ptr< evidence_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:67:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 67 | auto_ptr refSeq_p(new BioXSD::referenceSequence()); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10339:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10339 | ::std::auto_ptr< frame_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10352:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10352 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10363:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10363 | ::std::auto_ptr< phase_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:73:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 73 | auto_ptr metCatCon_p(new BioXSD::SemanticConcept()); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10381:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10381 | ::std::auto_ptr< variation_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:79:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 79 | auto_ptr metCit_p(new BioXSD::EntryReference()); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10392:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10392 | ::std::auto_ptr< alignment_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:82:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 82 | auto_ptr method_p(new BioXSD::method1("freecontact", "M#fc")); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:86:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 86 | auto_ptr sc_l1_p(new BioXSD::scoreType("S#l1")); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: At global scope: BioXSD-1.1_xsd.cxx:10460:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10460 | FeatureRecord (::std::auto_ptr< referenceSequence_type > referenceSequence) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:88:9: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 88 | auto_ptr metCit_p(new BioXSD::EntryReference()); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:94:9: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 94 | auto_ptr method_p(new BioXSD::Method("l1-norm")); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::FeatureRecord::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:10509:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10509 | ::std::auto_ptr< referenceSequence_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:100:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 100 | auto_ptr sc_MI_p(new BioXSD::scoreType("S#MI")); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:102:9: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 102 | auto_ptr metCit_p(new BioXSD::EntryReference()); | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10523:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10523 | ::std::auto_ptr< annotation_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:108:9: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 108 | auto_ptr method_p(new BioXSD::Method("Mutual information")); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:114:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 114 | auto_ptr sc_fr_p(new BioXSD::scoreType("S#fr")); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:116:9: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 116 | auto_ptr metCit_p(new BioXSD::EntryReference()); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10534:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10534 | ::std::auto_ptr< blockWithOccurrenceReferences_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:122:9: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 122 | auto_ptr method_p(new BioXSD::Method("Frobenius norm")); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:128:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 128 | auto_ptr featCon_p(new BioXSD::SemanticConcept()); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:135:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 135 | auto_ptr feat_p(new BioXSD::FeatureType()); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:139:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 139 | auto_ptr cref_p(new BioXSD::condensedReferences1()); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:142:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 142 | auto_ptr ann_p(new BioXSD::annotation1(feat_p)); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::Evidence::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:10633:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10633 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10644:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10644 | ::std::auto_ptr< predicted_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10661:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10661 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10672:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10672 | ::std::auto_ptr< experimental_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: At global scope: BioXSD-1.1_xsd.cxx:10733:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10733 | MethodResult (::std::auto_ptr< method_type > method) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::MethodResult::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:10779:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10779 | ::std::auto_ptr< method_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10792:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10792 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10801:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10801 | ::std::auto_ptr< score_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: At global scope: BioXSD-1.1_xsd.cxx:10868:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10868 | Result (::std::auto_ptr< methodIdRef_type > methodIdRef) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:156:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 156 | auto_ptr pt1_p(new BioXSD::SequencePoint()); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::Result::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:10913:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10913 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:158:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 158 | auto_ptr pt2_p(new BioXSD::SequencePoint()); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10924:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10924 | ::std::auto_ptr< methodIdRef_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:161:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 161 | auto_ptr pos_p(new BioXSD::SequencePosition()); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10941:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10941 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:10950:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10950 | ::std::auto_ptr< score_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:165:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 165 | auto_ptr occ_p(new BioXSD::occurrence()); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp:177:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 177 | auto_ptr occRef_p(new BioXSD::blockWithOccurrenceReferences()); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::PredictionResult::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:11060:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11060 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11071:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11071 | ::std::auto_ptr< method_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11088:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11088 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11099:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11099 | ::std::auto_ptr< methodIdRef_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11116:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11116 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11125:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11125 | ::std::auto_ptr< score_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11141:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11141 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11152:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11152 | ::std::auto_ptr< verdict_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp: At global scope: _write_bioxsd.cpp:199:1: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 199 | auto_ptr _get_bxScore( const fc::contact_t& __ct, const std::string& __scid ) | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ _write_bioxsd.cpp: In function ‘std::auto_ptr _get_bxScore(const freecontact::contact_t&, const string&)’: _write_bioxsd.cpp:201:5: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 201 | auto_ptr MI_score_p(new BioXSD::Score( bo::str(bo::format("%g") % __ct.score) )); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/boost/format.hpp:23, from _write_bioxsd.cpp:17: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: At global scope: BioXSD-1.1_xsd.cxx:11217:32: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11217 | ExperimentalEvidence (::std::auto_ptr< dataReference_type > dataReference) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::ExperimentalEvidence::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:11268:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11268 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11279:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11279 | ::std::auto_ptr< dataReference_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11296:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11296 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11305:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11305 | ::std::auto_ptr< citation_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11321:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11321 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11332:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11332 | ::std::auto_ptr< verdict_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11349:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11349 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11360:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11360 | ::std::auto_ptr< reliability_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::ScoreType::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:11482:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11482 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11491:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11491 | ::std::auto_ptr< concept_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11507:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11507 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11516:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11516 | ::std::auto_ptr< method_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11532:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11532 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11541:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11541 | ::std::auto_ptr< methodIdRef_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::Score::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:11679:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11679 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:11690:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11690 | ::std::auto_ptr< position_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::GeneralSequencePosition::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:12613:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12613 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12622:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12622 | ::std::auto_ptr< point_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12638:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12638 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12649:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12649 | ::std::auto_ptr< insertion_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12666:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12666 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12675:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12675 | ::std::auto_ptr< segment_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12691:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12691 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12702:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12702 | ::std::auto_ptr< nextPoint_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12719:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12719 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12730:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12730 | ::std::auto_ptr< nextPartition_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12747:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12747 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12758:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12758 | ::std::auto_ptr< samePoint_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12775:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12775 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12786:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12786 | ::std::auto_ptr< samePartition_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12803:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12803 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12814:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12814 | ::std::auto_ptr< outside_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::GeneralOutsideSequencePosition::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:12970:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12970 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12981:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12981 | ::std::auto_ptr< correspondance_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:12998:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12998 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:13007:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13007 | ::std::auto_ptr< point_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:13023:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13023 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:13034:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13034 | ::std::auto_ptr< insertion_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:13051:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13051 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:13060:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13060 | ::std::auto_ptr< segment_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:13076:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13076 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:13087:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13087 | ::std::auto_ptr< explicitSequenceReference_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::GeneticCode::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:13231:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13231 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:13242:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13242 | ::std::auto_ptr< reference_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:13260:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13260 | ::std::auto_ptr< codon_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::TranslationData::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:13354:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13354 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:13365:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13365 | ::std::auto_ptr< geneticCode_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:13382:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13382 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:13393:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13393 | ::std::auto_ptr< phase_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:13410:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13410 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:13421:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13421 | ::std::auto_ptr< reversedTranslationDirection_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::SequenceReference::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:14184:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14184 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:14195:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14195 | ::std::auto_ptr< subsequencePosition_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:14212:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14212 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:14223:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14223 | ::std::auto_ptr< supersequence_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:14240:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14240 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:14251:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14251 | ::std::auto_ptr< supersequenceName_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::Method::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:14410:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14410 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:14419:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14419 | ::std::auto_ptr< categoryConcept_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:14435:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14435 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:14444:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14444 | ::std::auto_ptr< citation_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::association::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:17632:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17632 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:17643:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17643 | ::std::auto_ptr< relationName_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:17660:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17660 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:17669:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17669 | ::std::auto_ptr< relationConcept_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:17685:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17685 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:17694:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17694 | ::std::auto_ptr< associatedConcept_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:17710:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17710 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:17719:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17719 | ::std::auto_ptr< associatedDatabaseEntry_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:17735:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17735 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:17744:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17744 | ::std::auto_ptr< associatedDatabase_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:17760:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17760 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:17769:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17769 | ::std::auto_ptr< associatedFeature_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::variation::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:17927:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17927 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:17938:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17938 | ::std::auto_ptr< canonicalVariant_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:17955:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17955 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:17964:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17964 | ::std::auto_ptr< variant_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:17980:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17980 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:17991:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17991 | ::std::auto_ptr< missing_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18008:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18008 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18017:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18017 | ::std::auto_ptr< score_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18033:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18033 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18044:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18044 | ::std::auto_ptr< position_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: At global scope: BioXSD-1.1_xsd.cxx:18102:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18102 | alignment (::std::auto_ptr< alignedSequence_type > alignedSequence) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::alignment::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:18148:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18148 | ::std::auto_ptr< alignmentOfReference_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18161:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18161 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18172:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18172 | ::std::auto_ptr< alignedSequence_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::referenceSequence::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:18292:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18292 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18303:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18303 | ::std::auto_ptr< sequenceRecord_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18320:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18320 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18331:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18331 | ::std::auto_ptr< sequenceReference_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18348:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18348 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18359:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18359 | ::std::auto_ptr< sequenceName_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18376:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18376 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18387:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18387 | ::std::auto_ptr< species_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18404:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18404 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18415:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18415 | ::std::auto_ptr< genomeBuild_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18432:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18432 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18443:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18443 | ::std::auto_ptr< chromosome_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18460:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18460 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18471:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18471 | ::std::auto_ptr< subsequencePosition_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18488:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18488 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18499:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18499 | ::std::auto_ptr< variantAccession_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18516:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18516 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18527:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18527 | ::std::auto_ptr< variantNote_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: At global scope: BioXSD-1.1_xsd.cxx:18590:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18590 | annotation (::std::auto_ptr< feature_type > feature) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::annotation::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:18638:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18638 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18649:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18649 | ::std::auto_ptr< feature_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18667:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18667 | ::std::auto_ptr< condensedReferences_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18680:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18680 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18689:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18689 | ::std::auto_ptr< occurrence_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::blockWithOccurrenceReferences::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:18801:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18801 | ::std::auto_ptr< database_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18812:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18812 | ::std::auto_ptr< ontology_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18823:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18823 | ::std::auto_ptr< semanticConcept_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18834:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18834 | ::std::auto_ptr< method_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18845:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18845 | ::std::auto_ptr< scoreType_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:18856:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 18856 | ::std::auto_ptr< annotation_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::alignmentOfReference::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:19177:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 19177 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:19186:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 19186 | ::std::auto_ptr< gap_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:19202:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 19202 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:19211:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 19211 | ::std::auto_ptr< insert_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:19227:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 19227 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:19236:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 19236 | ::std::auto_ptr< frameshift_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:19252:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 19252 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:19261:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 19261 | ::std::auto_ptr< sequenceScore_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::condensedReferences::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:19360:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 19360 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:19371:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 19371 | ::std::auto_ptr< method_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:19388:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 19388 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:19399:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 19399 | ::std::auto_ptr< ontology_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:19416:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 19416 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:19427:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 19427 | ::std::auto_ptr< database_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:19444:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 19444 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:19455:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 19455 | ::std::auto_ptr< scoreType_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: At global scope: BioXSD-1.1_xsd.cxx:19944:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 19944 | annotation1 (::std::auto_ptr< feature_type > feature) | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::annotation1::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:19992:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 19992 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20003:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 20003 | ::std::auto_ptr< feature_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20021:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 20021 | ::std::auto_ptr< condensedReferences_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20035:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 20035 | ::std::auto_ptr< occurrence_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::condensedReferences1::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:20290:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 20290 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20301:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 20301 | ::std::auto_ptr< method_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20318:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 20318 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20329:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 20329 | ::std::auto_ptr< methodIdRef_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20346:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 20346 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20357:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 20357 | ::std::auto_ptr< ontology_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20374:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 20374 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20385:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 20385 | ::std::auto_ptr< ontologyIdRef_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20402:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 20402 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20413:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 20413 | ::std::auto_ptr< database_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20430:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 20430 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20441:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 20441 | ::std::auto_ptr< databaseIdRef_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20458:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 20458 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20469:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 20469 | ::std::auto_ptr< scoreType_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20486:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 20486 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20497:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 20497 | ::std::auto_ptr< scoreTypeIdRef_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::occurrence::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:20598:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 20598 | ::std::auto_ptr< association_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::association1::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:20702:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 20702 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20713:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 20713 | ::std::auto_ptr< relationName_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20730:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 20730 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20739:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 20739 | ::std::auto_ptr< relationConcept_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20755:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 20755 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20764:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 20764 | ::std::auto_ptr< relationConceptIdRef_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20781:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 20781 | ::std::auto_ptr< associatedFeatureOccurrence_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx: In member function ‘void BioXSD::associatedFeatureOccurrence::parse(xsd::cxx::xml::dom::parser&, xml_schema::flags)’: BioXSD-1.1_xsd.cxx:20868:16: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 20868 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ BioXSD-1.1_xsd.cxx:20877:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 20877 | ::std::auto_ptr< score_type > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from BioXSD-1.1_xsd.hxx:66, from BioXSD-1.1_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ g++ -DHAVE_CONFIG_H -I. -I../lib -I../lib -I../src -I/usr/include -I/usr/include/xercesc -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o freecontact-freecontact_output_xsd.o `test -f 'freecontact_output_xsd.cxx' || echo './'`freecontact_output_xsd.cxx In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1507:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1507 | sequence (::std::auto_ptr< sequence_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1585:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1585 | species (::std::auto_ptr< species_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1665:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1665 | reference (::std::auto_ptr< reference_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1741:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1741 | name (::std::auto_ptr< name_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1817:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1817 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1893:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1893 | translationData (::std::auto_ptr< translationData_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1969:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1969 | inlineBaseQuality (::std::auto_ptr< inlineBaseQuality_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:1992:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 1992 | BiosequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2105:45: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2105 | GeneralNucleotideSequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2186:44: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2186 | GeneralAminoacidSequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2267:38: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2267 | NucleotideSequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2348:37: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2348 | AminoacidSequenceRecord (::std::auto_ptr< sequence_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:2611:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 2611 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3051:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3051 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3109:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3109 | len (::std::auto_ptr< len_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3287:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3287 | min (::std::auto_ptr< min_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3366:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3366 | max (::std::auto_ptr< max_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3442:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3442 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3500:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3500 | minCertainty (::std::auto_ptr< minCertainty_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3567:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3567 | maxCertainty (::std::auto_ptr< maxCertainty_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3877:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3877 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:3935:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 3935 | bases (::std::auto_ptr< bases_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4110:36: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4110 | localAlignmentPosition (::std::auto_ptr< localAlignmentPosition_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4186:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4186 | sequenceRecord (::std::auto_ptr< sequenceRecord_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4262:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4262 | sequenceReference (::std::auto_ptr< sequenceReference_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4338:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4338 | sequenceName (::std::auto_ptr< sequenceName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4414:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4414 | species (::std::auto_ptr< species_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4490:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4490 | genomeBuild (::std::auto_ptr< genomeBuild_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4566:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4566 | chromosome (::std::auto_ptr< chromosome_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4644:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4644 | subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4720:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4720 | variantAccession (::std::auto_ptr< variantAccession_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:4796:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 4796 | variantNote (::std::auto_ptr< variantNote_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:5064:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 5064 | reversedDirection (::std::auto_ptr< reversedDirection_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:5589:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 5589 | name (::std::auto_ptr< name_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:5798:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 5798 | className (::std::auto_ptr< className_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:5938:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 5938 | properties (::std::auto_ptr< properties_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6115:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6115 | specificFeatureName (::std::auto_ptr< specificFeatureName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6385:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6385 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6627:36: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6627 | appliesToWholeSequence (::std::auto_ptr< appliesToWholeSequence_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6703:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6703 | position (::std::auto_ptr< position_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6843:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6843 | occurrenceName (::std::auto_ptr< occurrenceName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6919:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6919 | occurrenceNote (::std::auto_ptr< occurrenceNote_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:6995:32: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 6995 | featureTypeDetails (::std::auto_ptr< featureTypeDetails_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7203:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7203 | frame (::std::auto_ptr< frame_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7279:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7279 | phase (::std::auto_ptr< phase_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7419:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7419 | alignment (::std::auto_ptr< alignment_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7588:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7588 | referenceSequence (::std::auto_ptr< referenceSequence_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7742:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7742 | FeatureRecord (::std::auto_ptr< referenceSequence_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7901:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7901 | predicted (::std::auto_ptr< predicted_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:7977:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 7977 | experimental (::std::auto_ptr< experimental_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8130:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8130 | method (::std::auto_ptr< method_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8217:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8217 | MethodResult (::std::auto_ptr< method_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8357:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8357 | methodIdRef (::std::auto_ptr< methodIdRef_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8444:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8444 | Result (::std::auto_ptr< methodIdRef_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8602:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8602 | method (::std::auto_ptr< method_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8678:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8678 | methodIdRef (::std::auto_ptr< methodIdRef_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8818:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8818 | verdict (::std::auto_ptr< verdict_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:8973:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 8973 | dataReference (::std::auto_ptr< dataReference_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9113:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9113 | verdict (::std::auto_ptr< verdict_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9189:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9189 | reliability (::std::auto_ptr< reliability_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9212:34: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9212 | ExperimentalEvidence (::std::auto_ptr< dataReference_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9566:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9566 | name (::std::auto_ptr< name_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9642:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9642 | index (::std::auto_ptr< index_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9718:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9718 | unit (::std::auto_ptr< unit_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9794:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9794 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:9974:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 9974 | position (::std::auto_ptr< position_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10032:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10032 | value (::std::auto_ptr< value_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10108:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10108 | scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10285:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10285 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10361:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10361 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10419:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10419 | certainty (::std::auto_ptr< certainty_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10679:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10679 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10755:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10755 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:10813:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 10813 | certainty (::std::auto_ptr< certainty_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11072:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11072 | pos (::std::auto_ptr< pos_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11148:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11148 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11206:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11206 | certainty (::std::auto_ptr< certainty_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11465:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11465 | min (::std::auto_ptr< min_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11544:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11544 | max (::std::auto_ptr< max_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11620:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11620 | strand (::std::auto_ptr< strand_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11678:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11678 | minCertainty (::std::auto_ptr< minCertainty_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:11745:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 11745 | maxCertainty (::std::auto_ptr< maxCertainty_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12003:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12003 | max (::std::auto_ptr< max_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12061:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12061 | certainty (::std::auto_ptr< certainty_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12377:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12377 | insertion (::std::auto_ptr< insertion_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12517:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12517 | nextPoint (::std::auto_ptr< nextPoint_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12593:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12593 | nextPartition (::std::auto_ptr< nextPartition_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12669:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12669 | samePoint (::std::auto_ptr< samePoint_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12745:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12745 | samePartition (::std::auto_ptr< samePartition_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:12821:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 12821 | outside (::std::auto_ptr< outside_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13071:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13071 | correspondance (::std::auto_ptr< correspondance_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13211:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13211 | insertion (::std::auto_ptr< insertion_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13351:39: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13351 | explicitSequenceReference (::std::auto_ptr< explicitSequenceReference_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13597:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13597 | reference (::std::auto_ptr< reference_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13832:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13832 | geneticCode (::std::auto_ptr< geneticCode_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13908:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13908 | phase (::std::auto_ptr< phase_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:13984:42: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 13984 | reversedTranslationDirection (::std::auto_ptr< reversedTranslationDirection_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14226:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14226 | dbName (::std::auto_ptr< dbName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14304:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14304 | dbUri (::std::auto_ptr< dbUri_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14380:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14380 | dbVersion (::std::auto_ptr< dbVersion_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14511:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14511 | wsdl (::std::auto_ptr< wsdl_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14587:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14587 | wsdlService (::std::auto_ptr< wsdlService_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14663:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14663 | wsdlPort (::std::auto_ptr< wsdlPort_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14739:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14739 | webserviceOperation (::std::auto_ptr< webserviceOperation_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14815:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14815 | webserviceVersion (::std::auto_ptr< webserviceVersion_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:14894:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 14894 | webserviceDate (::std::auto_ptr< webserviceDate_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15075:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15075 | accession (::std::auto_ptr< accession_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15151:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15151 | entryUri (::std::auto_ptr< entryUri_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15227:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15227 | entryVersion (::std::auto_ptr< entryVersion_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15305:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15305 | date (::std::auto_ptr< date_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15481:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15481 | ontologyName (::std::auto_ptr< ontologyName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15559:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15559 | ontologyUri (::std::auto_ptr< ontologyUri_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15635:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15635 | ontologyVersion (::std::auto_ptr< ontologyVersion_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15870:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15870 | accession (::std::auto_ptr< accession_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:15946:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 15946 | conceptUri (::std::auto_ptr< conceptUri_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16028:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16028 | term (::std::auto_ptr< term_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16207:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16207 | speciesName (::std::auto_ptr< speciesName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16283:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16283 | speciesNote (::std::auto_ptr< speciesNote_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16459:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16459 | subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16538:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16538 | supersequence (::std::auto_ptr< supersequence_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16617:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16617 | supersequenceName (::std::auto_ptr< supersequenceName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16693:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16693 | sequenceVersion (::std::auto_ptr< sequenceVersion_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16769:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16769 | variantAccession (::std::auto_ptr< variantAccession_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:16845:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 16845 | variantNote (::std::auto_ptr< variantNote_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17130:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17130 | name (::std::auto_ptr< name_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17206:17: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17206 | uri (::std::auto_ptr< uri_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17282:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17282 | version (::std::auto_ptr< version_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17358:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17358 | date (::std::auto_ptr< date_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17434:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17434 | wsdl (::std::auto_ptr< wsdl_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17510:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17510 | wsdlService (::std::auto_ptr< wsdlService_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17586:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17586 | wsdlPort (::std::auto_ptr< wsdlPort_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17662:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17662 | webserviceOperation (::std::auto_ptr< webserviceOperation_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17738:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17738 | webserviceVersion (::std::auto_ptr< webserviceVersion_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:17817:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 17817 | webserviceDate (::std::auto_ptr< webserviceDate_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:22916:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 22916 | relationName (::std::auto_ptr< relationName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:23505:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 23505 | canonicalVariant (::std::auto_ptr< canonicalVariant_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:23645:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 23645 | missing (::std::auto_ptr< missing_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:23787:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 23787 | position (::std::auto_ptr< position_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:23961:34: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 23961 | alignmentOfReference (::std::auto_ptr< alignmentOfReference_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24019:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24019 | alignedSequence (::std::auto_ptr< alignedSequence_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24042:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24042 | alignment (::std::auto_ptr< alignedSequence_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24200:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24200 | sequenceRecord (::std::auto_ptr< sequenceRecord_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24276:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24276 | sequenceReference (::std::auto_ptr< sequenceReference_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24352:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24352 | sequenceName (::std::auto_ptr< sequenceName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24428:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24428 | species (::std::auto_ptr< species_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24504:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24504 | genomeBuild (::std::auto_ptr< genomeBuild_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24580:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24580 | chromosome (::std::auto_ptr< chromosome_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24658:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24658 | subsequencePosition (::std::auto_ptr< subsequencePosition_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24734:30: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24734 | variantAccession (::std::auto_ptr< variantAccession_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24810:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24810 | variantNote (::std::auto_ptr< variantNote_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:24970:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 24970 | feature (::std::auto_ptr< feature_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:25046:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 25046 | condensedReferences (::std::auto_ptr< condensedReferences_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:25133:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 25133 | annotation (::std::auto_ptr< feature_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:25778:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 25778 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:25932:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 25932 | code (::std::auto_ptr< code_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26122:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 26122 | aminoacid (::std::auto_ptr< aminoacid_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26253:18: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 26253 | note (::std::auto_ptr< note_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26781:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 26781 | method (::std::auto_ptr< method_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26857:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 26857 | ontology (::std::auto_ptr< ontology_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:26933:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 26933 | database (::std::auto_ptr< database_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27009:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 27009 | scoreType (::std::auto_ptr< scoreType_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27164:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 27164 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27316:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 27316 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27468:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 27468 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27620:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 27620 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27773:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 27773 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:27925:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 27925 | feature (::std::auto_ptr< feature_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28001:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28001 | condensedReferences (::std::auto_ptr< condensedReferences_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28088:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28088 | annotation1 (::std::auto_ptr< feature_type >); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28471:20: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28471 | method (::std::auto_ptr< method_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28547:25: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28547 | methodIdRef (::std::auto_ptr< methodIdRef_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28623:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28623 | ontology (::std::auto_ptr< ontology_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28699:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28699 | ontologyIdRef (::std::auto_ptr< ontologyIdRef_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28775:22: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28775 | database (::std::auto_ptr< database_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28851:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28851 | databaseIdRef (::std::auto_ptr< databaseIdRef_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:28927:23: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 28927 | scoreType (::std::auto_ptr< scoreType_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:29003:28: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 29003 | scoreTypeIdRef (::std::auto_ptr< scoreTypeIdRef_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:29244:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 29244 | localId (::std::auto_ptr< localId_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:29415:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 29415 | relationName (::std::auto_ptr< relationName_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.hxx:645, from freecontact_output_xsd.cxx:41: BioXSD-1.1_xsd.hxx:29826:24: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 29826 | localIdRef (::std::auto_ptr< localIdRef_type > p); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41: freecontact_output_xsd.hxx:681:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 681 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41: freecontact_output_xsd.hxx:697:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 697 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41: freecontact_output_xsd.hxx:715:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 715 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41: freecontact_output_xsd.hxx:731:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 731 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41: freecontact_output_xsd.hxx:747:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 747 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41: freecontact_output_xsd.hxx:765:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 765 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41: freecontact_output_xsd.hxx:785:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 785 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41: freecontact_output_xsd.hxx:807:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 807 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41: freecontact_output_xsd.hxx:830:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 830 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41: freecontact_output_xsd.hxx:847:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 847 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41: freecontact_output_xsd.hxx:863:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 863 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41: freecontact_output_xsd.hxx:881:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 881 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41: freecontact_output_xsd.hxx:895:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 895 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from freecontact_output_xsd.cxx:41: freecontact_output_xsd.hxx:912:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 912 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx:68:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 68 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx: In function ‘std::auto_ptr freecontact_output_xsd::contactMap(const string&, xml_schema::flags, const properties&)’: freecontact_output_xsd.cxx:85:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 85 | return ::std::auto_ptr< ::BioXSD::FeatureRecord > ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx: At global scope: freecontact_output_xsd.cxx:90:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 90 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx: In function ‘std::auto_ptr freecontact_output_xsd::contactMap(const string&, xml_schema::error_handler&, xml_schema::flags, const properties&)’: freecontact_output_xsd.cxx:107:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 107 | return ::std::auto_ptr< ::BioXSD::FeatureRecord > ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx: At global scope: freecontact_output_xsd.cxx:112:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 112 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx: In function ‘std::auto_ptr freecontact_output_xsd::contactMap(const string&, xercesc_3_2::DOMErrorHandler&, xml_schema::flags, const properties&)’: freecontact_output_xsd.cxx:125:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 125 | return ::std::auto_ptr< ::BioXSD::FeatureRecord > ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx: At global scope: freecontact_output_xsd.cxx:130:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 130 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx:143:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 143 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx:157:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 157 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx:167:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 167 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx:181:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 181 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx:196:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 196 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx:207:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 207 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx: In function ‘std::auto_ptr freecontact_output_xsd::contactMap(xercesc_3_2::InputSource&, xml_schema::flags, const properties&)’: freecontact_output_xsd.cxx:220:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 220 | return ::std::auto_ptr< ::BioXSD::FeatureRecord > ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx: At global scope: freecontact_output_xsd.cxx:225:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 225 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx: In function ‘std::auto_ptr freecontact_output_xsd::contactMap(xercesc_3_2::InputSource&, xml_schema::error_handler&, xml_schema::flags, const properties&)’: freecontact_output_xsd.cxx:238:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 238 | return ::std::auto_ptr< ::BioXSD::FeatureRecord > ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx: At global scope: freecontact_output_xsd.cxx:243:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 243 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx: In function ‘std::auto_ptr freecontact_output_xsd::contactMap(xercesc_3_2::InputSource&, xercesc_3_2::DOMErrorHandler&, xml_schema::flags, const properties&)’: freecontact_output_xsd.cxx:256:19: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 256 | return ::std::auto_ptr< ::BioXSD::FeatureRecord > ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx: At global scope: freecontact_output_xsd.cxx:261:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 261 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx: In function ‘std::auto_ptr freecontact_output_xsd::contactMap(const xercesc_3_2::DOMDocument&, xml_schema::flags, const properties&)’: freecontact_output_xsd.cxx:271:21: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 271 | return ::std::auto_ptr< ::BioXSD::FeatureRecord > ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx:280:12: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 280 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx:289:14: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 289 | ::std::auto_ptr< ::BioXSD::FeatureRecord > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx: At global scope: freecontact_output_xsd.cxx:307:10: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 307 | ::std::auto_ptr< ::BioXSD::FeatureRecord > | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx: In function ‘std::auto_ptr freecontact_output_xsd::contactMap(xsd::cxx::xml::dom::auto_ptr, xml_schema::flags, const properties&)’: freecontact_output_xsd.cxx:329:12: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 329 | ::std::auto_ptr< ::xsd::cxx::tree::type > tmp ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ freecontact_output_xsd.cxx:339:14: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 339 | ::std::auto_ptr< ::BioXSD::FeatureRecord > r ( | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /usr/include/xsd/cxx/tree/elements.hxx:23, from freecontact_output_xsd.hxx:66, from freecontact_output_xsd.cxx:41: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ /bin/bash ../libtool --tag=CXX --mode=link g++ -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -L/usr/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o freecontact freecontact-freecontact.o freecontact-_write_bioxsd.o freecontact-freecontact_input_xsd.o freecontact-freecontact_output_xsd.o freecontact-BioXSD-1.1_xsd.o -lboost_program_options -lxerces-c ../lib/libfreecontact.la libtool: link: g++ -fopenmp -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/freecontact freecontact-freecontact.o freecontact-_write_bioxsd.o freecontact-freecontact_input_xsd.o freecontact-freecontact_output_xsd.o freecontact-BioXSD-1.1_xsd.o -L/usr/lib -lboost_program_options -lxerces-c ../lib/.libs/libfreecontact.so -pthread -fopenmp make[2]: Leaving directory '/<>/src' make[2]: Entering directory '/<>' make[2]: Nothing to be done for 'all-am'. make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_auto_test -a make -j4 check VERBOSE=1 make[1]: Entering directory '/<>' Making check in lib make[2]: Entering directory '/<>/lib' make[2]: Leaving directory '/<>/lib' Making check in src make[2]: Entering directory '/<>/src' make test_freecontact make[3]: Entering directory '/<>/src' make[3]: Nothing to be done for 'test_freecontact'. make[3]: Leaving directory '/<>/src' make check-TESTS make[3]: Entering directory '/<>/src' make[4]: Entering directory '/<>/src' PASS: test_freecontact ============================================================================ Testsuite summary for freecontact 1.0.21 ============================================================================ # TOTAL: 1 # PASS: 1 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' make[2]: Leaving directory '/<>/src' make[2]: Entering directory '/<>' make[2]: Nothing to be done for 'check-am'. make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch --with bash-completion dh_testroot -a dh_prep -a dh_auto_install -a make -j1 install DESTDIR=/<>/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' Making install in lib make[2]: Entering directory '/<>/lib' make[3]: Entering directory '/<>/lib' /bin/mkdir -p '/<>/debian/tmp/usr/lib/arm-linux-gnueabihf' /bin/bash ../libtool --mode=install /usr/bin/install -c libfreecontact.la '/<>/debian/tmp/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/libfreecontact.so.0.0.0 /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/libfreecontact.so.0.0.0 libtool: install: (cd /<>/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libfreecontact.so.0.0.0 libfreecontact.so.0 || { rm -f libfreecontact.so.0 && ln -s libfreecontact.so.0.0.0 libfreecontact.so.0; }; }) libtool: install: (cd /<>/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libfreecontact.so.0.0.0 libfreecontact.so || { rm -f libfreecontact.so && ln -s libfreecontact.so.0.0.0 libfreecontact.so; }; }) libtool: install: /usr/bin/install -c .libs/libfreecontact.lai /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/libfreecontact.la libtool: install: /usr/bin/install -c .libs/libfreecontact.a /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/libfreecontact.a libtool: install: chmod 644 /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/libfreecontact.a libtool: install: ranlib /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/libfreecontact.a libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf' /bin/mkdir -p '/<>/debian/tmp/usr/include' /usr/bin/install -c -m 644 freecontact.h '/<>/debian/tmp/usr/include' make[3]: Leaving directory '/<>/lib' make[2]: Leaving directory '/<>/lib' Making install in src make[2]: Entering directory '/<>/src' make[3]: Entering directory '/<>/src' /bin/mkdir -p '/<>/debian/tmp/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c freecontact '/<>/debian/tmp/usr/bin' libtool: warning: '../lib/libfreecontact.la' has not been installed in '/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/freecontact /<>/debian/tmp/usr/bin/freecontact /bin/mkdir -p '/<>/debian/tmp/usr/share/doc/freecontact/examples' /usr/bin/install -c -m 644 demo_1000.aln demo_1000.psicov.50 PF00071_v25_999.fa PF00071_v25_999.xml PF00071_v25_999.evfold.50 PF00071_v25_999.evfold.50.xml '/<>/debian/tmp/usr/share/doc/freecontact/examples' /bin/mkdir -p '/<>/debian/tmp/usr/share/freecontact' /usr/bin/install -c -m 644 BioXSD-1.1.xsd freecontact_input.xsd freecontact_output.xsd '/<>/debian/tmp/usr/share/freecontact' /bin/mkdir -p '/<>/debian/tmp/usr/share/freecontact' /usr/bin/install -c a2m2aln '/<>/debian/tmp/usr/share/freecontact' /bin/mkdir -p '/<>/debian/tmp/usr/share/man/man1' /usr/bin/install -c -m 644 freecontact.1 '/<>/debian/tmp/usr/share/man/man1' make[3]: Leaving directory '/<>/src' make[2]: Leaving directory '/<>/src' make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install d-shlibmove --commit \ --multiarch \ --exclude-la \ --devunversioned \ --override s/libblas3-dev/libblas-dev/ \ --v5 \ --override s/libgfortran[345]-dev/libgfortran-8-dev/ \ --override s/libquadmath0-dev/libgcc-8-dev/ \ --override s/liblapack3-dev/liblapack-dev/ \ --movedev debian/tmp/usr/include/* usr/include \ debian/tmp/usr/lib/*/*.so Library package automatic movement utility --> libblas-dev package exists. --> libgfortran-8-dev package exists. --> liblapack-dev package exists. set -e install -d -m 755 debian/libfreecontact-dev/usr/lib/arm-linux-gnueabihf install -d -m 755 debian/libfreecontact0v5/usr/lib/arm-linux-gnueabihf mv debian/tmp/usr/lib/arm-linux-gnueabihf/libfreecontact.a debian/libfreecontact-dev/usr/lib/arm-linux-gnueabihf mv debian/tmp/usr/lib/arm-linux-gnueabihf/libfreecontact.so debian/libfreecontact-dev/usr/lib/arm-linux-gnueabihf mv /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/libfreecontact.so.0 debian/libfreecontact0v5/usr/lib/arm-linux-gnueabihf mv /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/libfreecontact.so.0.0.0 debian/libfreecontact0v5/usr/lib/arm-linux-gnueabihf PKGDEV=libfreecontact-dev PKGSHL=libfreecontact0v5 install -d -m 755 debian/libfreecontact-dev/usr/include mv debian/tmp/usr/include/freecontact.h debian/libfreecontact-dev/usr/include make[1]: Leaving directory '/<>' debian/rules override_dh_installdocs make[1]: Entering directory '/<>' dh_installdocs find debian -name jquery.js -delete make[1]: Leaving directory '/<>' dh_installchangelogs -a dh_installman -a debian/rules override_dh_bash-completion make[1]: Entering directory '/<>' echo "Until bug #668254 is fixed we need to override this" Until bug #668254 is fixed we need to override this mkdir -p debian/freecontact/usr/share/bash-completion/completions cp -a freecontact.bash-completion debian/freecontact/usr/share/bash-completion/completions make[1]: Leaving directory '/<>' dh_perl -a dh_link -a dh_strip_nondeterminism -a debian/rules override_dh_compress make[1]: Entering directory '/<>' dh_compress -Xlibfreecontact.tag -Xdemo_1000.aln -XPF00071_v25_999.fa -XPF00071_v25_999.xml make[1]: Leaving directory '/<>' dh_fixperms -a dh_missing -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libfreecontact0v5/usr/lib/arm-linux-gnueabihf/libfreecontact.so.0.0.0 found in none of the libraries dpkg-shlibdeps: warning: debian/freecontact/usr/bin/freecontact contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dh_installdeb -a debian/rules override_dh_gencontrol make[1]: Entering directory '/<>' dh_gencontrol -- '-VDescription=FreeContact is a protein residue contact predictor optimized for speed.${Newline}Its input is a multiple sequence alignment. FreeContact can function as an${Newline}accelerated drop-in for the published contact predictors${Newline}EVfold-mfDCA of DS. Marks (2011) and${Newline}PSICOV of D. Jones (2011).${Newline}${Newline}FreeContact is accelerated by a combination of vector instructions, multiple${Newline}threads, and faster implementation of key parts.${Newline}Depending on the alignment, 8-fold or higher speedups are possible.${Newline}${Newline}A sufficiently large alignment is required for meaningful results.${Newline}As a minimum, an alignment with an effective (after-weighting) sequence count${Newline}bigger than the length of the query sequence should be used. Alignments with${Newline}tens of thousands of (effective) sequences are considered good input.${Newline}${Newline}jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite${Newline}can be used to generate the alignments, for example.' dpkg-gencontrol: warning: package libfreecontact-dev: substitution variable ${devlibs:Depends} unused, but is defined make[1]: Leaving directory '/<>' dh_md5sums -a dh_builddeb -a INFO: pkgstriptranslations version 144 INFO: pkgstriptranslations version 144 INFO: pkgstriptranslations version 144 pkgstriptranslations: processing libfreecontact0v5 (in debian/libfreecontact0v5); do_strip: , oemstrip: pkgstriptranslations: processing freecontact (in debian/freecontact); do_strip: , oemstrip: pkgstriptranslations: processing libfreecontact-dev (in debian/libfreecontact-dev); do_strip: , oemstrip: pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgstripfiles: processing control file: debian/libfreecontact0v5/DEBIAN/control, package libfreecontact0v5, directory debian/libfreecontact0v5 INFO: pkgstripfiles: waiting for lock (libfreecontact0v5) ... pkgstripfiles: processing control file: debian/libfreecontact-dev/DEBIAN/control, package libfreecontact-dev, directory debian/libfreecontact-dev INFO: pkgstripfiles: waiting for lock (libfreecontact-dev) ... INFO: pkgstripfiles: waiting for lock (libfreecontact0v5) ... INFO: pkgstripfiles: waiting for lock (libfreecontact-dev) ... INFO: pkgstripfiles: waiting for lock (libfreecontact0v5) ... INFO: pkgstripfiles: waiting for lock (libfreecontact-dev) ... INFO: pkgstripfiles: waiting for lock (libfreecontact0v5) ... INFO: pkgstripfiles: waiting for lock (libfreecontact-dev) ... INFO: pkgstripfiles: waiting for lock (libfreecontact0v5) ... INFO: pkgstripfiles: waiting for lock (libfreecontact-dev) ... pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgstripfiles: processing control file: debian/freecontact/DEBIAN/control, package freecontact, directory debian/freecontact Searching for duplicated docs in dependency libfreecontact0v5... INFO: pkgstripfiles: waiting for lock (libfreecontact0v5) ... INFO: pkgstripfiles: waiting for lock (libfreecontact-dev) ... symlinking changelog.Debian.gz in freecontact to file in libfreecontact0v5 pkgstripfiles: Running PNG optimization (using 4 cpus) for package freecontact ... pkgstripfiles: No PNG files. dpkg-deb: building package 'freecontact' in '../freecontact_1.0.21-7build1_armhf.deb'. INFO: pkgstripfiles: waiting for lock (libfreecontact-dev) ... pkgstripfiles: Truncating usr/share/doc/libfreecontact0v5/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package libfreecontact0v5 ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libfreecontact0v5' in '../libfreecontact0v5_1.0.21-7build1_armhf.deb'. INFO: pkgstriptranslations version 144 INFO: pkgstriptranslations version 144 pkgstriptranslations: processing freecontact-dbgsym (in debian/.debhelper/freecontact/dbgsym-root); do_strip: , oemstrip: Searching for duplicated docs in dependency libfreecontact0v5... pkgstriptranslations: processing libfreecontact0v5-dbgsym (in debian/.debhelper/libfreecontact0v5/dbgsym-root); do_strip: , oemstrip: symlinking changelog.Debian.gz in libfreecontact-dev to file in libfreecontact0v5 pkgstripfiles: Running PNG optimization (using 4 cpus) for package libfreecontact-dev ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libfreecontact-dev' in '../libfreecontact-dev_1.0.21-7build1_armhf.deb'. pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgstripfiles: processing control file: debian/.debhelper/freecontact/dbgsym-root/DEBIAN/control, package freecontact-dbgsym, directory debian/.debhelper/freecontact/dbgsym-root dpkg-deb: building package 'freecontact-dbgsym' in 'debian/.debhelper/scratch-space/build-freecontact/freecontact-dbgsym_1.0.21-7build1_armhf.deb'. pkgstripfiles: processing control file: debian/.debhelper/libfreecontact0v5/dbgsym-root/DEBIAN/control, package libfreecontact0v5-dbgsym, directory debian/.debhelper/libfreecontact0v5/dbgsym-root dpkg-deb: building package 'libfreecontact0v5-dbgsym' in 'debian/.debhelper/scratch-space/build-libfreecontact0v5/libfreecontact0v5-dbgsym_1.0.21-7build1_armhf.deb'. Renaming libfreecontact0v5-dbgsym_1.0.21-7build1_armhf.deb to libfreecontact0v5-dbgsym_1.0.21-7build1_armhf.ddeb Renaming freecontact-dbgsym_1.0.21-7build1_armhf.deb to freecontact-dbgsym_1.0.21-7build1_armhf.ddeb dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../freecontact_1.0.21-7build1_armhf.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20200203-2345 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ freecontact_1.0.21-7build1_armhf.changes: ----------------------------------------- Format: 1.8 Date: Mon, 03 Feb 2020 20:25:29 +0000 Source: freecontact Binary: freecontact libfreecontact-dev libfreecontact0v5 Architecture: armhf Version: 1.0.21-7build1 Distribution: focal-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Dimitri John Ledkov Description: freecontact - fast protein contact predictor libfreecontact-dev - fast protein contact predictor library - development files libfreecontact0v5 - fast protein contact predictor library Changes: freecontact (1.0.21-7build1) focal; urgency=medium . * No change rebuild against new boost1.71 ABI Checksums-Sha1: c5d6139b4dc7a6f2eee3da881a47ce1472271c4f 4751772 freecontact-dbgsym_1.0.21-7build1_armhf.ddeb 1e6d67023f4967ab02fe0b150ddacdbade1c5e08 8083 freecontact_1.0.21-7build1_armhf.buildinfo b1d3a42c4e7c68e887a8b9f1417132a8beb79c48 310936 freecontact_1.0.21-7build1_armhf.deb 68fa2b2047292900ad4a7f486b319bb80753e737 72756 libfreecontact-dev_1.0.21-7build1_armhf.deb db6ce253d30e4ffa2b01e517053cc33724d27532 536152 libfreecontact0v5-dbgsym_1.0.21-7build1_armhf.ddeb 3ad24c5e9b431338730d6afaea010cbb124a05b3 57544 libfreecontact0v5_1.0.21-7build1_armhf.deb Checksums-Sha256: 881fb35076cd263867bcfec7daf9b91249897cfa14f58d57ec7791b5bf9cdbe5 4751772 freecontact-dbgsym_1.0.21-7build1_armhf.ddeb 1931d87f7e6af545efb8f99c49682284cc007cad78b5918ff8c843451cff1c78 8083 freecontact_1.0.21-7build1_armhf.buildinfo 5a1411e906aa01c9533be9e8dc5755eeabe14830b238a7fa5faa4038c889adc3 310936 freecontact_1.0.21-7build1_armhf.deb cd3ed449a6338a4e96c0aa7ab617cc2f7a15a21ef3c2b2c25a54b45c65ae5c03 72756 libfreecontact-dev_1.0.21-7build1_armhf.deb 206e5684a6ec5e8020416bed20663a3986e0f640244292b5944dff5162b2c5ca 536152 libfreecontact0v5-dbgsym_1.0.21-7build1_armhf.ddeb b6b8add6ea018bf284f87d25c3000ec9379e5f2f6e5d06fbe297b55c5bc4aeb6 57544 libfreecontact0v5_1.0.21-7build1_armhf.deb Files: 93841192f2b267b7705b7c3098e7c7a6 4751772 debug optional freecontact-dbgsym_1.0.21-7build1_armhf.ddeb 8ef7d78b38f9fd2309f5a4941a7cd10d 8083 science optional freecontact_1.0.21-7build1_armhf.buildinfo 3aec92d5e47c5147be8fffaa4975adf0 310936 science optional freecontact_1.0.21-7build1_armhf.deb 31fb658d34d91d20d094431f2ae7c455 72756 libdevel optional libfreecontact-dev_1.0.21-7build1_armhf.deb 5023f94bbca9f20947cb739274b939a2 536152 debug optional libfreecontact0v5-dbgsym_1.0.21-7build1_armhf.ddeb 136a166338cd69e23c36cdc8d51e2509 57544 libs optional libfreecontact0v5_1.0.21-7build1_armhf.deb Original-Maintainer: Debian Med Packaging Team +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ freecontact_1.0.21-7build1_armhf.deb ------------------------------------ new debian package, version 2.0. size 310936 bytes: control archive=1532 bytes. 1500 bytes, 31 lines control 1132 bytes, 14 lines md5sums Package: freecontact Version: 1.0.21-7build1 Architecture: armhf Maintainer: Ubuntu Developers Installed-Size: 1233 Depends: libboost-program-options1.71.0, libc6 (>= 2.7), libfreecontact0v5, libgcc-s1 (>= 3.5), libstdc++6 (>= 9), libxerces-c3.2, perl:any Suggests: bash-completion, hhsuite, hmmer Section: science Priority: optional Homepage: http://rostlab.org/ Description: fast protein contact predictor FreeContact is a protein residue contact predictor optimized for speed. Its input is a multiple sequence alignment. FreeContact can function as an accelerated drop-in for the published contact predictors EVfold-mfDCA of DS. Marks (2011) and PSICOV of D. Jones (2011). . FreeContact is accelerated by a combination of vector instructions, multiple threads, and faster implementation of key parts. Depending on the alignment, 8-fold or higher speedups are possible. . A sufficiently large alignment is required for meaningful results. As a minimum, an alignment with an effective (after-weighting) sequence count bigger than the length of the query sequence should be used. Alignments with tens of thousands of (effective) sequences are considered good input. . jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite can be used to generate the alignments, for example. . This package contains the command line tool freecontact(1). Original-Maintainer: Debian Med Packaging Team drwxr-xr-x root/root 0 2020-02-03 20:25 ./ drwxr-xr-x root/root 0 2020-02-03 20:25 ./usr/ drwxr-xr-x root/root 0 2020-02-03 20:25 ./usr/bin/ -rwxr-xr-x root/root 669196 2020-02-03 20:25 ./usr/bin/freecontact drwxr-xr-x root/root 0 2020-02-03 20:25 ./usr/share/ drwxr-xr-x root/root 0 2020-02-03 20:25 ./usr/share/bash-completion/ drwxr-xr-x root/root 0 2020-02-03 20:25 ./usr/share/bash-completion/completions/ -rw-r--r-- root/root 1408 2013-07-15 13:07 ./usr/share/bash-completion/completions/freecontact.bash-completion drwxr-xr-x root/root 0 2020-02-03 20:25 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-02-03 20:25 ./usr/share/doc/freecontact/ lrwxrwxrwx root/root 0 2020-02-03 20:25 ./usr/share/doc/freecontact/changelog.Debian.gz -> ../libfreecontact0v5/changelog.Debian.gz -rw-r--r-- root/root 1401 2018-07-26 13:32 ./usr/share/doc/freecontact/copyright drwxr-xr-x root/root 0 2020-02-03 20:25 ./usr/share/doc/freecontact/examples/ -rw-r--r-- root/root 1374 2020-02-03 20:25 ./usr/share/doc/freecontact/examples/PF00071_v25_999.evfold.50 -rw-r--r-- root/root 2130 2020-02-03 20:25 ./usr/share/doc/freecontact/examples/PF00071_v25_999.evfold.50.xml.gz -rw-r--r-- root/root 166738 2020-02-03 20:25 ./usr/share/doc/freecontact/examples/PF00071_v25_999.fa -rw-r--r-- root/root 160326 2020-02-03 20:25 ./usr/share/doc/freecontact/examples/PF00071_v25_999.xml -rw-r--r-- root/root 127000 2020-02-03 20:25 ./usr/share/doc/freecontact/examples/demo_1000.aln -rw-r--r-- root/root 956 2020-02-03 20:25 ./usr/share/doc/freecontact/examples/demo_1000.psicov.50 drwxr-xr-x root/root 0 2020-02-03 20:25 ./usr/share/freecontact/ -rw-r--r-- root/root 95654 2020-02-03 20:25 ./usr/share/freecontact/BioXSD-1.1.xsd -rwxr-xr-x root/root 4769 2020-02-03 20:25 ./usr/share/freecontact/a2m2aln -rw-r--r-- root/root 2166 2020-02-03 20:25 ./usr/share/freecontact/freecontact_input.xsd -rw-r--r-- root/root 1679 2020-02-03 20:25 ./usr/share/freecontact/freecontact_output.xsd drwxr-xr-x root/root 0 2020-02-03 20:25 ./usr/share/man/ drwxr-xr-x root/root 0 2020-02-03 20:25 ./usr/share/man/man1/ -rw-r--r-- root/root 4852 2020-02-03 20:25 ./usr/share/man/man1/freecontact.1.gz libfreecontact-dev_1.0.21-7build1_armhf.deb ------------------------------------------- new debian package, version 2.0. size 72756 bytes: control archive=1184 bytes. 1535 bytes, 35 lines control 216 bytes, 3 lines md5sums Package: libfreecontact-dev Source: freecontact Version: 1.0.21-7build1 Architecture: armhf Maintainer: Ubuntu Developers Installed-Size: 323 Depends: libfreecontact0v5 (= 1.0.21-7build1) Suggests: libfreecontact-doc Conflicts: libfreecontact-dev Provides: libfreecontact-dev Section: libdevel Priority: optional Homepage: http://rostlab.org/ Description: fast protein contact predictor library - development files FreeContact is a protein residue contact predictor optimized for speed. Its input is a multiple sequence alignment. FreeContact can function as an accelerated drop-in for the published contact predictors EVfold-mfDCA of DS. Marks (2011) and PSICOV of D. Jones (2011). . FreeContact is accelerated by a combination of vector instructions, multiple threads, and faster implementation of key parts. Depending on the alignment, 8-fold or higher speedups are possible. . A sufficiently large alignment is required for meaningful results. As a minimum, an alignment with an effective (after-weighting) sequence count bigger than the length of the query sequence should be used. Alignments with tens of thousands of (effective) sequences are considered good input. . jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite can be used to generate the alignments, for example. . This package contains files necessary for developing applications with libfreecontact. Original-Maintainer: Debian Med Packaging Team drwxr-xr-x root/root 0 2020-02-03 20:25 ./ drwxr-xr-x root/root 0 2020-02-03 20:25 ./usr/ drwxr-xr-x root/root 0 2020-02-03 20:25 ./usr/include/ -rw-r--r-- root/root 12665 2020-02-03 20:25 ./usr/include/freecontact.h drwxr-xr-x root/root 0 2020-02-03 20:25 ./usr/lib/ drwxr-xr-x root/root 0 2020-02-03 20:25 ./usr/lib/arm-linux-gnueabihf/ -rw-r--r-- root/root 302996 2020-02-03 20:25 ./usr/lib/arm-linux-gnueabihf/libfreecontact.a lrwxrwxrwx root/root 0 2020-02-03 20:25 ./usr/lib/arm-linux-gnueabihf/libfreecontact.so -> libfreecontact.so.0.0.0 drwxr-xr-x root/root 0 2020-02-03 20:25 ./usr/share/ drwxr-xr-x root/root 0 2020-02-03 20:25 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-02-03 20:25 ./usr/share/doc/libfreecontact-dev/ lrwxrwxrwx root/root 0 2020-02-03 20:25 ./usr/share/doc/libfreecontact-dev/changelog.Debian.gz -> ../libfreecontact0v5/changelog.Debian.gz -rw-r--r-- root/root 1401 2018-07-26 13:32 ./usr/share/doc/libfreecontact-dev/copyright libfreecontact0v5_1.0.21-7build1_armhf.deb ------------------------------------------ new debian package, version 2.0. size 57544 bytes: control archive=1332 bytes. 1583 bytes, 34 lines control 248 bytes, 3 lines md5sums 35 bytes, 1 lines shlibs 74 bytes, 2 lines triggers Package: libfreecontact0v5 Source: freecontact Version: 1.0.21-7build1 Architecture: armhf Maintainer: Ubuntu Developers Installed-Size: 125 Depends: libblas3 | libblas.so.3, libc6 (>= 2.15), libgcc-s1 (>= 3.5), libgfortran5 (>= 8), libgomp1 (>= 6), liblapack3 | liblapack.so.3, libstdc++6 (>= 5.2) Conflicts: libfreecontact0 Replaces: libfreecontact0 Section: libs Priority: optional Multi-Arch: same Homepage: http://rostlab.org/ Description: fast protein contact predictor library FreeContact is a protein residue contact predictor optimized for speed. Its input is a multiple sequence alignment. FreeContact can function as an accelerated drop-in for the published contact predictors EVfold-mfDCA of DS. Marks (2011) and PSICOV of D. Jones (2011). . FreeContact is accelerated by a combination of vector instructions, multiple threads, and faster implementation of key parts. Depending on the alignment, 8-fold or higher speedups are possible. . A sufficiently large alignment is required for meaningful results. As a minimum, an alignment with an effective (after-weighting) sequence count bigger than the length of the query sequence should be used. Alignments with tens of thousands of (effective) sequences are considered good input. . jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite can be used to generate the alignments, for example. . This package contains the shared library implementing freecontact. Original-Maintainer: Debian Med Packaging Team drwxr-xr-x root/root 0 2020-02-03 20:25 ./ drwxr-xr-x root/root 0 2020-02-03 20:25 ./usr/ drwxr-xr-x root/root 0 2020-02-03 20:25 ./usr/lib/ drwxr-xr-x root/root 0 2020-02-03 20:25 ./usr/lib/arm-linux-gnueabihf/ lrwxrwxrwx root/root 0 2020-02-03 20:25 ./usr/lib/arm-linux-gnueabihf/libfreecontact.so.0 -> libfreecontact.so.0.0.0 -rw-r--r-- root/root 112036 2020-02-03 20:25 ./usr/lib/arm-linux-gnueabihf/libfreecontact.so.0.0.0 drwxr-xr-x root/root 0 2020-02-03 20:25 ./usr/share/ drwxr-xr-x root/root 0 2020-02-03 20:25 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-02-03 20:25 ./usr/share/doc/libfreecontact0v5/ -rw-r--r-- root/root 1259 2020-02-03 20:25 ./usr/share/doc/libfreecontact0v5/changelog.Debian.gz -rw-r--r-- root/root 1401 2018-07-26 13:32 ./usr/share/doc/libfreecontact0v5/copyright +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: armhf Build-Space: 96976 Build-Time: 409 Distribution: focal-proposed Host Architecture: armhf Install-Time: 61 Job: freecontact_1.0.21-7build1.dsc Machine Architecture: arm64 Package: freecontact Package-Time: 475 Source-Version: 1.0.21-7build1 Space: 96976 Status: successful Version: 1.0.21-7build1 -------------------------------------------------------------------------------- Finished at 20200203-2345 Build needed 00:07:55, 96976k disc space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=focal --arch=armhf PACKAGEBUILD-18651704 Scanning for processes to kill in build PACKAGEBUILD-18651704