gasic 0.0.r19-3 source package in Ubuntu


gasic (0.0.r19-3) unstable; urgency=medium

  * Revert enabling arm64 since the package Depends bowtie2 which is only
    available on amd64.  Set "Architecture: any" and Build-Depends: bowtie2

 -- Andreas Tille <email address hidden>  Wed, 13 Dec 2017 10:33:39 +0100

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Uploaded by:
Debian Med on 2017-12-13
Uploaded to:
Original maintainer:
Debian Med
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Cosmic release on 2018-05-01 universe misc
Bionic release on 2017-12-13 universe misc


File Size SHA-256 Checksum
gasic_0.0.r19-3.dsc 2.0 KiB 2a7a0d26bb2bd9e39c4858a89ab3a8b9233317d0d645138984b50df291ba7dea
gasic_0.0.r19.orig.tar.xz 12.1 KiB dcda434ace63719c7d3baca18c5da9adfe0e8a269b8dc6224306be9ddec9b8a9
gasic_0.0.r19-3.debian.tar.xz 5.7 KiB c25dbce389fc4581980e1abbead04ee250fa93bf0ba89caf5613a150ef6f1f3f

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Binary packages built by this source

gasic: genome abundance similarity correction

 One goal of sequencing based metagenomic analysis is the quantitative
 taxonomic assessment of microbial community compositions. However, the
 majority of approaches either quantify at low resolution (e.g. at phylum
 level) or have severe problems discerning highly similar species. Yet,
 accurate quantification on species level is desirable in applications
 such as metagenomic diagnostics or community comparison. GASiC is a
 method to correct read alignment results for the ambiguities imposed by
 similarities of genomes. It has superior performance over existing