gasic 0.0.r19-4 source package in Ubuntu


gasic (0.0.r19-4) unstable; urgency=medium

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 -- Andreas Tille <email address hidden>  Fri, 14 Sep 2018 19:32:17 +0200

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Uploaded by:
Debian Med on 2018-09-14
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Original maintainer:
Debian Med
Medium Urgency

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Series Pocket Published Component Section
Disco release on 2018-11-09 universe misc


File Size SHA-256 Checksum
gasic_0.0.r19-4.dsc 2.0 KiB 3a31d5c88e5f98ce1d13ea9580346fe580e9f3db07882555fc624c0fd9422e0e
gasic_0.0.r19.orig.tar.xz 12.1 KiB dcda434ace63719c7d3baca18c5da9adfe0e8a269b8dc6224306be9ddec9b8a9
gasic_0.0.r19-4.debian.tar.xz 5.8 KiB 039e276da7de1f1491889ae26a4d7d5afa7ed53f01476feb8c739216fee1f906

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Binary packages built by this source

gasic: genome abundance similarity correction

 One goal of sequencing based metagenomic analysis is the quantitative
 taxonomic assessment of microbial community compositions. However, the
 majority of approaches either quantify at low resolution (e.g. at phylum
 level) or have severe problems discerning highly similar species. Yet,
 accurate quantification on species level is desirable in applications
 such as metagenomic diagnostics or community comparison. GASiC is a
 method to correct read alignment results for the ambiguities imposed by
 similarities of genomes. It has superior performance over existing